data_4DZU # _entry.id 4DZU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DZU pdb_00004dzu 10.2210/pdb4dzu/pdb RCSB RCSB070990 ? ? WWPDB D_1000070990 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-02 2 'Structure model' 1 1 2013-08-28 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4DZU _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-03-01 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3o42 . unspecified PDB 4DZV . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Johnson, L.M.' 1 'Mortenson, D.E.' 2 'Yun, H.G.' 3 'Horne, W.S.' 4 'Ketas, T.J.' 5 'Lu, M.' 6 'Moore, J.P.' 7 'Gellman, S.H.' 8 # _citation.id primary _citation.title 'Enhancement of alpha-helix mimicry by an alpha / beta-peptide foldamer via incorporation of a dense ionic side-chain array.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 134 _citation.page_first 7317 _citation.page_last 7320 _citation.year 2012 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22524614 _citation.pdbx_database_id_DOI 10.1021/ja302428d # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Johnson, L.M.' 1 ? primary 'Mortenson, D.E.' 2 ? primary 'Yun, H.G.' 3 ? primary 'Horne, W.S.' 4 ? primary 'Ketas, T.J.' 5 ? primary 'Lu, M.' 6 ? primary 'Moore, J.P.' 7 ? primary 'Gellman, S.H.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man gp41-5 22246.820 1 ? ? ? ? 2 polymer syn 3-alpha 4765.263 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 30 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILSGGSGGWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLGGSG GSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILSGGSGGWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLGGS GGSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL ; ;SGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILSGGSGGWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLGGSG GSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILSGGSGGWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLGGS GGSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL ; A ? 2 'polypeptide(L)' no no RTWEEWDRAIAEYARRIEELIRAAQEQQRKNEEALREL RTWEEWDRAIAEYARRIEELIRAAQEQQRKNEEALREL B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 ILE n 1 4 VAL n 1 5 GLN n 1 6 GLN n 1 7 GLN n 1 8 ASN n 1 9 ASN n 1 10 LEU n 1 11 LEU n 1 12 ARG n 1 13 ALA n 1 14 ILE n 1 15 GLU n 1 16 ALA n 1 17 GLN n 1 18 GLN n 1 19 HIS n 1 20 LEU n 1 21 LEU n 1 22 GLN n 1 23 LEU n 1 24 THR n 1 25 VAL n 1 26 TRP n 1 27 GLY n 1 28 ILE n 1 29 LYS n 1 30 GLN n 1 31 LEU n 1 32 GLN n 1 33 ALA n 1 34 ARG n 1 35 ILE n 1 36 LEU n 1 37 SER n 1 38 GLY n 1 39 GLY n 1 40 SER n 1 41 GLY n 1 42 GLY n 1 43 TRP n 1 44 MET n 1 45 GLU n 1 46 TRP n 1 47 ASP n 1 48 ARG n 1 49 GLU n 1 50 ILE n 1 51 ASN n 1 52 ASN n 1 53 TYR n 1 54 THR n 1 55 SER n 1 56 LEU n 1 57 ILE n 1 58 HIS n 1 59 SER n 1 60 LEU n 1 61 ILE n 1 62 GLU n 1 63 GLU n 1 64 SER n 1 65 GLN n 1 66 ASN n 1 67 GLN n 1 68 GLN n 1 69 GLU n 1 70 LYS n 1 71 ASN n 1 72 GLU n 1 73 GLN n 1 74 GLU n 1 75 LEU n 1 76 LEU n 1 77 GLY n 1 78 GLY n 1 79 SER n 1 80 GLY n 1 81 GLY n 1 82 SER n 1 83 GLY n 1 84 ILE n 1 85 VAL n 1 86 GLN n 1 87 GLN n 1 88 GLN n 1 89 ASN n 1 90 ASN n 1 91 LEU n 1 92 LEU n 1 93 ARG n 1 94 ALA n 1 95 ILE n 1 96 GLU n 1 97 ALA n 1 98 GLN n 1 99 GLN n 1 100 HIS n 1 101 LEU n 1 102 LEU n 1 103 GLN n 1 104 LEU n 1 105 THR n 1 106 VAL n 1 107 TRP n 1 108 GLY n 1 109 ILE n 1 110 LYS n 1 111 GLN n 1 112 LEU n 1 113 GLN n 1 114 ALA n 1 115 ARG n 1 116 ILE n 1 117 LEU n 1 118 SER n 1 119 GLY n 1 120 GLY n 1 121 SER n 1 122 GLY n 1 123 GLY n 1 124 TRP n 1 125 MET n 1 126 GLU n 1 127 TRP n 1 128 ASP n 1 129 ARG n 1 130 GLU n 1 131 ILE n 1 132 ASN n 1 133 ASN n 1 134 TYR n 1 135 THR n 1 136 SER n 1 137 LEU n 1 138 ILE n 1 139 HIS n 1 140 SER n 1 141 LEU n 1 142 ILE n 1 143 GLU n 1 144 GLU n 1 145 SER n 1 146 GLN n 1 147 ASN n 1 148 GLN n 1 149 GLN n 1 150 GLU n 1 151 LYS n 1 152 ASN n 1 153 GLU n 1 154 GLN n 1 155 GLU n 1 156 LEU n 1 157 LEU n 1 158 GLY n 1 159 GLY n 1 160 SER n 1 161 GLY n 1 162 GLY n 1 163 SER n 1 164 GLY n 1 165 ILE n 1 166 VAL n 1 167 GLN n 1 168 GLN n 1 169 GLN n 1 170 ASN n 1 171 ASN n 1 172 LEU n 1 173 LEU n 1 174 ARG n 1 175 ALA n 1 176 ILE n 1 177 GLU n 1 178 ALA n 1 179 GLN n 1 180 GLN n 1 181 HIS n 1 182 LEU n 1 183 LEU n 1 184 GLN n 1 185 LEU n 1 186 THR n 1 187 VAL n 1 188 TRP n 1 189 GLY n 1 190 ILE n 1 191 LYS n 1 192 GLN n 1 193 LEU n 1 194 GLN n 1 195 ALA n 1 196 ARG n 1 197 ILE n 1 198 LEU n 2 1 ARG n 2 2 THR n 2 3 TRP n 2 4 GLU n 2 5 GLU n 2 6 TRP n 2 7 ASP n 2 8 ARG n 2 9 ALA n 2 10 ILE n 2 11 ALA n 2 12 GLU n 2 13 TYR n 2 14 ALA n 2 15 ARG n 2 16 ARG n 2 17 ILE n 2 18 GLU n 2 19 GLU n 2 20 LEU n 2 21 ILE n 2 22 ARG n 2 23 ALA n 2 24 ALA n 2 25 GLN n 2 26 GLU n 2 27 GLN n 2 28 GLN n 2 29 ARG n 2 30 LYS n 2 31 ASN n 2 32 GLU n 2 33 GLU n 2 34 ALA n 2 35 LEU n 2 36 ARG n 2 37 GLU n 2 38 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 GLY 38 38 ? ? ? A . n A 1 39 GLY 39 39 ? ? ? A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 TRP 46 46 46 TRP TRP A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 GLU 74 74 ? ? ? A . n A 1 75 LEU 75 75 ? ? ? A . n A 1 76 LEU 76 76 ? ? ? A . n A 1 77 GLY 77 77 ? ? ? A . n A 1 78 GLY 78 78 ? ? ? A . n A 1 79 SER 79 79 ? ? ? A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 TRP 107 107 107 TRP TRP A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 TRP 124 124 124 TRP TRP A . n A 1 125 MET 125 125 125 MET MET A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 TRP 127 127 127 TRP TRP A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 TYR 134 134 134 TYR TYR A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 HIS 139 139 139 HIS HIS A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 GLU 144 144 144 GLU GLU A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 GLN 146 146 146 GLN GLN A . n A 1 147 ASN 147 147 147 ASN ASN A . n A 1 148 GLN 148 148 148 GLN GLN A . n A 1 149 GLN 149 149 149 GLN GLN A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLN 154 154 154 GLN GLN A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 GLY 159 159 ? ? ? A . n A 1 160 SER 160 160 ? ? ? A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 SER 163 163 163 SER SER A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 GLN 167 167 167 GLN GLN A . n A 1 168 GLN 168 168 168 GLN GLN A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 ASN 171 171 171 ASN ASN A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 GLN 179 179 179 GLN GLN A . n A 1 180 GLN 180 180 180 GLN GLN A . n A 1 181 HIS 181 181 181 HIS HIS A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 GLN 184 184 184 GLN GLN A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 TRP 188 188 188 TRP TRP A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 GLN 192 192 192 GLN GLN A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 GLN 194 194 194 GLN GLN A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 LEU 198 198 198 LEU LEU A . n B 2 1 ARG 1 1 1 ARG ARG B . n B 2 2 THR 2 2 2 THR THR B . n B 2 3 TRP 3 3 3 TRP TRP B . n B 2 4 GLU 4 4 4 GLU GLU B . n B 2 5 GLU 5 5 5 GLU GLU B . n B 2 6 TRP 6 6 6 TRP TRP B . n B 2 7 ASP 7 7 7 ASP ASP B . n B 2 8 ARG 8 8 8 ARG ARG B . n B 2 9 ALA 9 9 9 ALA ALA B . n B 2 10 ILE 10 10 10 ILE ILE B . n B 2 11 ALA 11 11 11 ALA ALA B . n B 2 12 GLU 12 12 12 GLU GLU B . n B 2 13 TYR 13 13 13 TYR TYR B . n B 2 14 ALA 14 14 14 ALA ALA B . n B 2 15 ARG 15 15 15 ARG ARG B . n B 2 16 ARG 16 16 16 ARG ARG B . n B 2 17 ILE 17 17 17 ILE ILE B . n B 2 18 GLU 18 18 18 GLU GLU B . n B 2 19 GLU 19 19 19 GLU GLU B . n B 2 20 LEU 20 20 20 LEU LEU B . n B 2 21 ILE 21 21 21 ILE ILE B . n B 2 22 ARG 22 22 22 ARG ARG B . n B 2 23 ALA 23 23 23 ALA ALA B . n B 2 24 ALA 24 24 24 ALA ALA B . n B 2 25 GLN 25 25 25 GLN GLN B . n B 2 26 GLU 26 26 26 GLU GLU B . n B 2 27 GLN 27 27 27 GLN GLN B . n B 2 28 GLN 28 28 28 GLN GLN B . n B 2 29 ARG 29 29 29 ARG ARG B . n B 2 30 LYS 30 30 30 LYS LYS B . n B 2 31 ASN 31 31 31 ASN ASN B . n B 2 32 GLU 32 32 32 GLU GLU B . n B 2 33 GLU 33 33 33 GLU GLU B . n B 2 34 ALA 34 34 34 ALA ALA B . n B 2 35 LEU 35 35 35 LEU LEU B . n B 2 36 ARG 36 36 36 ARG ARG B . n B 2 37 GLU 37 37 37 GLU GLU B . n B 2 38 LEU 38 38 38 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 201 1 GOL GOL A . D 4 HOH 1 301 1 HOH HOH A . D 4 HOH 2 302 2 HOH HOH A . D 4 HOH 3 303 3 HOH HOH A . D 4 HOH 4 304 4 HOH HOH A . D 4 HOH 5 305 5 HOH HOH A . D 4 HOH 6 306 6 HOH HOH A . D 4 HOH 7 307 7 HOH HOH A . D 4 HOH 8 308 9 HOH HOH A . D 4 HOH 9 309 10 HOH HOH A . D 4 HOH 10 310 11 HOH HOH A . D 4 HOH 11 311 12 HOH HOH A . D 4 HOH 12 312 13 HOH HOH A . D 4 HOH 13 313 14 HOH HOH A . D 4 HOH 14 314 16 HOH HOH A . D 4 HOH 15 315 17 HOH HOH A . D 4 HOH 16 316 19 HOH HOH A . D 4 HOH 17 317 20 HOH HOH A . D 4 HOH 18 318 21 HOH HOH A . D 4 HOH 19 319 22 HOH HOH A . D 4 HOH 20 320 23 HOH HOH A . D 4 HOH 21 321 24 HOH HOH A . D 4 HOH 22 322 25 HOH HOH A . D 4 HOH 23 323 26 HOH HOH A . D 4 HOH 24 324 27 HOH HOH A . D 4 HOH 25 325 28 HOH HOH A . D 4 HOH 26 326 29 HOH HOH A . D 4 HOH 27 327 30 HOH HOH A . E 4 HOH 1 101 8 HOH HOH B . E 4 HOH 2 102 15 HOH HOH B . E 4 HOH 3 103 18 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 4 ? CG ? B GLU 4 CG 2 1 Y 1 B GLU 4 ? CD ? B GLU 4 CD 3 1 Y 1 B GLU 4 ? OE1 ? B GLU 4 OE1 4 1 Y 1 B GLU 4 ? OE2 ? B GLU 4 OE2 5 1 Y 1 B ARG 8 ? CG ? B ARG 8 CG 6 1 Y 1 B ARG 8 ? CD ? B ARG 8 CD 7 1 Y 1 B ARG 8 ? NE ? B ARG 8 NE 8 1 Y 1 B ARG 8 ? CZ ? B ARG 8 CZ 9 1 Y 1 B ARG 8 ? NH1 ? B ARG 8 NH1 10 1 Y 1 B ARG 8 ? NH2 ? B ARG 8 NH2 11 1 Y 1 B ARG 15 ? CD ? B ARG 15 CD 12 1 Y 1 B ARG 15 ? NE ? B ARG 15 NE 13 1 Y 1 B ARG 15 ? CZ ? B ARG 15 CZ 14 1 Y 1 B ARG 15 ? NH1 ? B ARG 15 NH1 15 1 Y 1 B ARG 15 ? NH2 ? B ARG 15 NH2 16 1 Y 1 B ARG 16 ? CD ? B ARG 16 CD 17 1 Y 1 B ARG 16 ? NE ? B ARG 16 NE 18 1 Y 1 B ARG 16 ? CZ ? B ARG 16 CZ 19 1 Y 1 B ARG 16 ? NH1 ? B ARG 16 NH1 20 1 Y 1 B ARG 16 ? NH2 ? B ARG 16 NH2 21 1 Y 1 B GLU 18 ? CD ? B GLU 18 CD 22 1 Y 1 B GLU 18 ? OE1 ? B GLU 18 OE1 23 1 Y 1 B GLU 18 ? OE2 ? B GLU 18 OE2 24 1 Y 1 B GLU 19 ? CD ? B GLU 19 CD 25 1 Y 1 B GLU 19 ? OE1 ? B GLU 19 OE1 26 1 Y 1 B GLU 19 ? OE2 ? B GLU 19 OE2 27 1 Y 1 B ARG 22 ? CD ? B ARG 22 CD 28 1 Y 1 B ARG 22 ? NE ? B ARG 22 NE 29 1 Y 1 B ARG 22 ? CZ ? B ARG 22 CZ 30 1 Y 1 B ARG 22 ? NH1 ? B ARG 22 NH1 31 1 Y 1 B ARG 22 ? NH2 ? B ARG 22 NH2 32 1 Y 1 B GLU 26 ? CD ? B GLU 26 CD 33 1 Y 1 B GLU 26 ? OE1 ? B GLU 26 OE1 34 1 Y 1 B GLU 26 ? OE2 ? B GLU 26 OE2 35 1 Y 1 B ARG 29 ? CG ? B ARG 29 CG 36 1 Y 1 B ARG 29 ? CD ? B ARG 29 CD 37 1 Y 1 B ARG 29 ? NE ? B ARG 29 NE 38 1 Y 1 B ARG 29 ? CZ ? B ARG 29 CZ 39 1 Y 1 B ARG 29 ? NH1 ? B ARG 29 NH1 40 1 Y 1 B ARG 29 ? NH2 ? B ARG 29 NH2 41 1 Y 1 B LYS 30 ? CE ? B LYS 30 CE 42 1 Y 1 B LYS 30 ? NZ ? B LYS 30 NZ 43 1 Y 1 B GLU 33 ? CD ? B GLU 33 CD 44 1 Y 1 B GLU 33 ? OE1 ? B GLU 33 OE1 45 1 Y 1 B GLU 33 ? OE2 ? B GLU 33 OE2 46 1 Y 1 B ARG 36 ? CG ? B ARG 36 CG 47 1 Y 1 B ARG 36 ? CD ? B ARG 36 CD 48 1 Y 1 B ARG 36 ? NE ? B ARG 36 NE 49 1 Y 1 B ARG 36 ? CZ ? B ARG 36 CZ 50 1 Y 1 B ARG 36 ? NH1 ? B ARG 36 NH1 51 1 Y 1 B ARG 36 ? NH2 ? B ARG 36 NH2 52 1 Y 1 B GLU 37 ? CG ? B GLU 37 CG 53 1 Y 1 B GLU 37 ? CD ? B GLU 37 CD 54 1 Y 1 B GLU 37 ? OE1 ? B GLU 37 OE1 55 1 Y 1 B GLU 37 ? OE2 ? B GLU 37 OE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.7.0009 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 EMBL MD-2 ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 8 PHASER . ? ? ? ? phasing ? ? ? # _cell.length_a 77.293 _cell.length_b 121.208 _cell.length_c 59.259 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4DZU _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 4DZU _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4DZU _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES, 1.0 M ammonium sulfate, 25% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-10-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'C(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97872 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97872 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-F # _reflns.entry_id 4DZU _reflns.d_resolution_high 2.100 _reflns.d_resolution_low 42.41 _reflns.number_obs 16616 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_netI_over_sigmaI 15.95 _reflns.pdbx_chi_squared 0.934 _reflns.pdbx_redundancy 5.900 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value 0.063 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.100 2.140 ? ? ? ? ? 0.267 0.951 6.000 ? 810 100.000 1 1 2.140 2.180 ? ? ? ? ? 0.200 0.968 6.000 ? 830 100.000 2 1 2.180 2.220 ? ? ? ? ? 0.196 0.943 6.000 ? 816 100.000 3 1 2.220 2.260 ? ? ? ? ? 0.224 1.029 5.900 ? 809 100.000 4 1 2.260 2.310 ? ? ? ? ? 0.167 0.956 6.000 ? 820 100.000 5 1 2.310 2.370 ? ? ? ? ? 0.133 0.989 6.000 ? 814 100.000 6 1 2.370 2.420 ? ? ? ? ? 0.116 0.971 6.000 ? 824 100.000 7 1 2.420 2.490 ? ? ? ? ? 0.101 0.907 6.000 ? 815 100.000 8 1 2.490 2.560 ? ? ? ? ? 0.091 0.943 6.000 ? 834 100.000 9 1 2.560 2.650 ? ? ? ? ? 0.080 0.979 6.000 ? 801 100.000 10 1 2.650 2.740 ? ? ? ? ? 0.083 0.974 6.000 ? 835 100.000 11 1 2.740 2.850 ? ? ? ? ? 0.065 0.984 6.000 ? 826 100.000 12 1 2.850 2.980 ? ? ? ? ? 0.057 1.018 6.000 ? 836 100.000 13 1 2.980 3.140 ? ? ? ? ? 0.059 0.965 6.000 ? 832 100.000 14 1 3.140 3.330 ? ? ? ? ? 0.064 0.748 6.000 ? 823 100.000 15 1 3.330 3.590 ? ? ? ? ? 0.074 0.877 5.900 ? 844 100.000 16 1 3.590 3.950 ? ? ? ? ? 0.080 0.905 5.900 ? 842 100.000 17 1 3.950 4.520 ? ? ? ? ? 0.062 0.967 5.900 ? 840 100.000 18 1 4.520 5.700 ? ? ? ? ? 0.039 0.952 5.800 ? 860 100.000 19 1 5.700 50.000 ? ? ? ? ? 0.036 0.648 5.300 ? 905 98.500 20 1 # _refine.entry_id 4DZU _refine.ls_d_res_high 2.1000 _refine.ls_d_res_low 42.400 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.6800 _refine.ls_number_reflns_obs 16599 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2153 _refine.ls_R_factor_R_work 0.2135 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2497 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 837 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 46.8869 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 7.2300 _refine.aniso_B[2][2] -3.2300 _refine.aniso_B[3][3] -4.0100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9570 _refine.correlation_coeff_Fo_to_Fc_free 0.9450 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.2140 _refine.pdbx_overall_ESU_R_Free 0.1830 _refine.overall_SU_ML 0.1520 _refine.overall_SU_B 5.8300 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 101.910 _refine.B_iso_min 25.780 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4DZU _refine_analyze.Luzzati_coordinate_error_obs 0.299 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1791 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1827 _refine_hist.d_res_high 2.1000 _refine_hist.d_res_low 42.400 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1833 0.011 0.019 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2476 1.418 1.925 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 225 4.488 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 100 38.813 26.300 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 337 18.099 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 10 22.903 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 275 0.112 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1386 0.005 0.020 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.1000 _refine_ls_shell.d_res_low 2.1550 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.2000 _refine_ls_shell.number_reflns_R_work 1132 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2910 _refine_ls_shell.R_factor_R_free 0.3470 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1182 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4DZU _struct.title 'Complex of 3-alpha bound to gp41-5' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DZU _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'viral fusion, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 4DZU 4DZU 1 ? ? ? 2 PDB 4DZU 4DZU 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DZU A 1 ? 198 ? 4DZU 1 ? 198 ? 1 198 2 2 4DZU B 1 ? 38 ? 4DZU 1 ? 38 ? 1 38 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2580 ? 1 MORE -20 ? 1 'SSA (A^2)' 11140 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? LEU A 36 ? SER A 1 LEU A 36 1 ? 36 HELX_P HELX_P2 2 GLY A 42 ? GLU A 72 ? GLY A 42 GLU A 72 1 ? 31 HELX_P HELX_P3 3 GLY A 81 ? LEU A 117 ? GLY A 81 LEU A 117 1 ? 37 HELX_P HELX_P4 4 GLY A 123 ? LEU A 156 ? GLY A 123 LEU A 156 1 ? 34 HELX_P HELX_P5 5 GLY A 162 ? LEU A 198 ? GLY A 162 LEU A 198 1 ? 37 HELX_P HELX_P6 6 THR B 2 ? LEU B 38 ? THR B 2 LEU B 38 1 ? 37 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 157 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 157 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 158 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 158 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.09 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GOL _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE GOL A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 121 ? SER A 121 . ? 1_555 ? 2 AC1 5 GLY A 123 ? GLY A 123 . ? 1_555 ? 3 AC1 5 TRP A 124 ? TRP A 124 . ? 1_555 ? 4 AC1 5 MET A 125 ? MET A 125 . ? 1_555 ? 5 AC1 5 GLU A 126 ? GLU A 126 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 62 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 62 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_555 _pdbx_validate_symm_contact.dist 1.92 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A HIS 100 ? ? CD2 A HIS 100 ? ? 1.411 1.354 0.057 0.009 N 2 1 CE2 B TRP 6 ? ? CD2 B TRP 6 ? ? 1.482 1.409 0.073 0.012 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 156 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 156 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 156 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 129.37 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 14.07 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 121 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 62.10 _pdbx_validate_torsion.psi 162.44 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 38 ? A GLY 38 2 1 Y 1 A GLY 39 ? A GLY 39 3 1 Y 1 A GLU 74 ? A GLU 74 4 1 Y 1 A LEU 75 ? A LEU 75 5 1 Y 1 A LEU 76 ? A LEU 76 6 1 Y 1 A GLY 77 ? A GLY 77 7 1 Y 1 A GLY 78 ? A GLY 78 8 1 Y 1 A SER 79 ? A SER 79 9 1 Y 1 A GLY 159 ? A GLY 159 10 1 Y 1 A SER 160 ? A SER 160 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GOL C1 C N N 123 GOL O1 O N N 124 GOL C2 C N N 125 GOL O2 O N N 126 GOL C3 C N N 127 GOL O3 O N N 128 GOL H11 H N N 129 GOL H12 H N N 130 GOL HO1 H N N 131 GOL H2 H N N 132 GOL HO2 H N N 133 GOL H31 H N N 134 GOL H32 H N N 135 GOL HO3 H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 SER N N N N 250 SER CA C N S 251 SER C C N N 252 SER O O N N 253 SER CB C N N 254 SER OG O N N 255 SER OXT O N N 256 SER H H N N 257 SER H2 H N N 258 SER HA H N N 259 SER HB2 H N N 260 SER HB3 H N N 261 SER HG H N N 262 SER HXT H N N 263 THR N N N N 264 THR CA C N S 265 THR C C N N 266 THR O O N N 267 THR CB C N R 268 THR OG1 O N N 269 THR CG2 C N N 270 THR OXT O N N 271 THR H H N N 272 THR H2 H N N 273 THR HA H N N 274 THR HB H N N 275 THR HG1 H N N 276 THR HG21 H N N 277 THR HG22 H N N 278 THR HG23 H N N 279 THR HXT H N N 280 TRP N N N N 281 TRP CA C N S 282 TRP C C N N 283 TRP O O N N 284 TRP CB C N N 285 TRP CG C Y N 286 TRP CD1 C Y N 287 TRP CD2 C Y N 288 TRP NE1 N Y N 289 TRP CE2 C Y N 290 TRP CE3 C Y N 291 TRP CZ2 C Y N 292 TRP CZ3 C Y N 293 TRP CH2 C Y N 294 TRP OXT O N N 295 TRP H H N N 296 TRP H2 H N N 297 TRP HA H N N 298 TRP HB2 H N N 299 TRP HB3 H N N 300 TRP HD1 H N N 301 TRP HE1 H N N 302 TRP HE3 H N N 303 TRP HZ2 H N N 304 TRP HZ3 H N N 305 TRP HH2 H N N 306 TRP HXT H N N 307 TYR N N N N 308 TYR CA C N S 309 TYR C C N N 310 TYR O O N N 311 TYR CB C N N 312 TYR CG C Y N 313 TYR CD1 C Y N 314 TYR CD2 C Y N 315 TYR CE1 C Y N 316 TYR CE2 C Y N 317 TYR CZ C Y N 318 TYR OH O N N 319 TYR OXT O N N 320 TYR H H N N 321 TYR H2 H N N 322 TYR HA H N N 323 TYR HB2 H N N 324 TYR HB3 H N N 325 TYR HD1 H N N 326 TYR HD2 H N N 327 TYR HE1 H N N 328 TYR HE2 H N N 329 TYR HH H N N 330 TYR HXT H N N 331 VAL N N N N 332 VAL CA C N S 333 VAL C C N N 334 VAL O O N N 335 VAL CB C N N 336 VAL CG1 C N N 337 VAL CG2 C N N 338 VAL OXT O N N 339 VAL H H N N 340 VAL H2 H N N 341 VAL HA H N N 342 VAL HB H N N 343 VAL HG11 H N N 344 VAL HG12 H N N 345 VAL HG13 H N N 346 VAL HG21 H N N 347 VAL HG22 H N N 348 VAL HG23 H N N 349 VAL HXT H N N 350 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 SER N CA sing N N 237 SER N H sing N N 238 SER N H2 sing N N 239 SER CA C sing N N 240 SER CA CB sing N N 241 SER CA HA sing N N 242 SER C O doub N N 243 SER C OXT sing N N 244 SER CB OG sing N N 245 SER CB HB2 sing N N 246 SER CB HB3 sing N N 247 SER OG HG sing N N 248 SER OXT HXT sing N N 249 THR N CA sing N N 250 THR N H sing N N 251 THR N H2 sing N N 252 THR CA C sing N N 253 THR CA CB sing N N 254 THR CA HA sing N N 255 THR C O doub N N 256 THR C OXT sing N N 257 THR CB OG1 sing N N 258 THR CB CG2 sing N N 259 THR CB HB sing N N 260 THR OG1 HG1 sing N N 261 THR CG2 HG21 sing N N 262 THR CG2 HG22 sing N N 263 THR CG2 HG23 sing N N 264 THR OXT HXT sing N N 265 TRP N CA sing N N 266 TRP N H sing N N 267 TRP N H2 sing N N 268 TRP CA C sing N N 269 TRP CA CB sing N N 270 TRP CA HA sing N N 271 TRP C O doub N N 272 TRP C OXT sing N N 273 TRP CB CG sing N N 274 TRP CB HB2 sing N N 275 TRP CB HB3 sing N N 276 TRP CG CD1 doub Y N 277 TRP CG CD2 sing Y N 278 TRP CD1 NE1 sing Y N 279 TRP CD1 HD1 sing N N 280 TRP CD2 CE2 doub Y N 281 TRP CD2 CE3 sing Y N 282 TRP NE1 CE2 sing Y N 283 TRP NE1 HE1 sing N N 284 TRP CE2 CZ2 sing Y N 285 TRP CE3 CZ3 doub Y N 286 TRP CE3 HE3 sing N N 287 TRP CZ2 CH2 doub Y N 288 TRP CZ2 HZ2 sing N N 289 TRP CZ3 CH2 sing Y N 290 TRP CZ3 HZ3 sing N N 291 TRP CH2 HH2 sing N N 292 TRP OXT HXT sing N N 293 TYR N CA sing N N 294 TYR N H sing N N 295 TYR N H2 sing N N 296 TYR CA C sing N N 297 TYR CA CB sing N N 298 TYR CA HA sing N N 299 TYR C O doub N N 300 TYR C OXT sing N N 301 TYR CB CG sing N N 302 TYR CB HB2 sing N N 303 TYR CB HB3 sing N N 304 TYR CG CD1 doub Y N 305 TYR CG CD2 sing Y N 306 TYR CD1 CE1 sing Y N 307 TYR CD1 HD1 sing N N 308 TYR CD2 CE2 doub Y N 309 TYR CD2 HD2 sing N N 310 TYR CE1 CZ doub Y N 311 TYR CE1 HE1 sing N N 312 TYR CE2 CZ sing Y N 313 TYR CE2 HE2 sing N N 314 TYR CZ OH sing N N 315 TYR OH HH sing N N 316 TYR OXT HXT sing N N 317 VAL N CA sing N N 318 VAL N H sing N N 319 VAL N H2 sing N N 320 VAL CA C sing N N 321 VAL CA CB sing N N 322 VAL CA HA sing N N 323 VAL C O doub N N 324 VAL C OXT sing N N 325 VAL CB CG1 sing N N 326 VAL CB CG2 sing N N 327 VAL CB HB sing N N 328 VAL CG1 HG11 sing N N 329 VAL CG1 HG12 sing N N 330 VAL CG1 HG13 sing N N 331 VAL CG2 HG21 sing N N 332 VAL CG2 HG22 sing N N 333 VAL CG2 HG23 sing N N 334 VAL OXT HXT sing N N 335 # _atom_sites.entry_id 4DZU _atom_sites.fract_transf_matrix[1][1] 0.012938 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008250 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016875 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_