HEADER DNA BINDING PROTEIN/DNA 15-MAR-12 4E5Z TITLE DAMAGED DNA INDUCED UV-DAMAGED DNA-BINDING PROTEIN (UV-DDB) TITLE 2 DIMERIZATION AND ITS ROLES IN CHROMATINIZED DNA REPAIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA DAMAGE-BINDING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DDB P127 SUBUNIT, DNA DAMAGE-BINDING PROTEIN A, DDBA, COMPND 5 DAMAGE-SPECIFIC DNA-BINDING PROTEIN 1, HBV X-ASSOCIATED PROTEIN 1, COMPND 6 XAP-1, UV-DAMAGED DNA-BINDING FACTOR, UV-DAMAGED DNA-BINDING PROTEIN COMPND 7 1, UV-DDB 1, XPE-BINDING FACTOR, XPE-BF, XERODERMA PIGMENTOSUM GROUP COMPND 8 E-COMPLEMENTING PROTEIN, XPCE; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA DAMAGE-BINDING PROTEIN 2; COMPND 12 CHAIN: B; COMPND 13 SYNONYM: DDB P48 SUBUNIT, DDBB, DAMAGE-SPECIFIC DNA-BINDING PROTEIN COMPND 14 2, UV-DAMAGED DNA-BINDING PROTEIN 2, UV-DDB 2; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: AP24 DNA STRAND; COMPND 18 CHAIN: F; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 4; COMPND 21 MOLECULE: AP24 DNA COMPLEMENTARY STRAND; COMPND 22 CHAIN: G; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DDB1, DDB1_HUMAN, Q16531, XAP1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PBLUEBAC4.5/V5-HIS NT-HIS10- SOURCE 12 DDB1PBLUEBAC4.5/V5-HIS NT-HIS10-DDB1; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: DDB2; SOURCE 18 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 19 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 21 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 22 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 23 EXPRESSION_SYSTEM_PLASMID: PBLUEBAC4.5/V5-HISNT-FLAG-DDB2; SOURCE 24 MOL_ID: 3; SOURCE 25 SYNTHETIC: YES; SOURCE 26 OTHER_DETAILS: SYNTHETIC SINGLE STRANDED 24-OLIGODEOXYNUCLEOTIDES SOURCE 27 WITH COMPLEMENTARY STRAND SEQUENCE: 5-TGACTGTATGATGACGATGCTGAC-3; SOURCE 28 MOL_ID: 4; SOURCE 29 SYNTHETIC: YES; SOURCE 30 OTHER_DETAILS: SYNTHETIC SINGLE STRANDED OLIGODEOXYNUCLEOTIDES WITH SOURCE 31 A CENTRAL TETRAHYDROFURAN ABASIC SITE MIMIC (3DR) ON CODING STRAND SOURCE 32 WITH SEQUENCE: 5-GTCAGCATCG(3DR)CATCATACAGTCA-3 KEYWDS BETA BARREL, PROTEIN-DNA COMPLEX, DOUBLE HELIX, DAMAGE, DNA REPAIR, KEYWDS 2 HOST-VIRUS INTERACTIONS, PROTEIN UBIQUITINATION, PROTEOSOMAL KEYWDS 3 DEGRADATION, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.I.YEH,S.DU REVDAT 4 13-SEP-23 4E5Z 1 SEQADV REVDAT 3 17-JUL-19 4E5Z 1 REMARK LINK REVDAT 2 24-OCT-12 4E5Z 1 JRNL REVDAT 1 22-AUG-12 4E5Z 0 JRNL AUTH J.I.YEH,A.S.LEVINE,S.DU,U.CHINTE,H.GHODKE,H.WANG,H.SHI, JRNL AUTH 2 C.L.HSIEH,J.F.CONWAY,B.VAN HOUTEN,V.RAPIC-OTRIN JRNL TITL DAMAGED DNA INDUCED UV-DAMAGED DNA-BINDING PROTEIN (UV-DDB) JRNL TITL 2 DIMERIZATION AND ITS ROLES IN CHROMATINIZED DNA REPAIR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 E2737 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22822215 JRNL DOI 10.1073/PNAS.1110067109 REMARK 2 REMARK 2 RESOLUTION. 3.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 33928 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.0962 - 7.3592 0.96 2977 156 0.1977 0.2590 REMARK 3 2 7.3592 - 5.8466 0.96 2803 158 0.2670 0.2874 REMARK 3 3 5.8466 - 5.1091 0.96 2771 142 0.2213 0.2623 REMARK 3 4 5.1091 - 4.6427 0.97 2816 147 0.1965 0.2231 REMARK 3 5 4.6427 - 4.3103 0.97 2750 151 0.2095 0.2846 REMARK 3 6 4.3103 - 4.0564 0.98 2790 137 0.2396 0.3034 REMARK 3 7 4.0564 - 3.8534 0.97 2747 148 0.2604 0.3374 REMARK 3 8 3.8534 - 3.6858 0.97 2766 140 0.2696 0.3508 REMARK 3 9 3.6858 - 3.5440 0.95 2676 139 0.2642 0.3228 REMARK 3 10 3.5440 - 3.4218 0.93 2611 150 0.2667 0.3293 REMARK 3 11 3.4218 - 3.3148 0.89 2499 118 0.2717 0.3842 REMARK 3 12 3.3148 - 3.2201 0.72 2032 104 0.2720 0.3893 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 185.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.57000 REMARK 3 B33 (A**2) : -0.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 13343 REMARK 3 ANGLE : 2.036 18303 REMARK 3 CHIRALITY : 0.101 2077 REMARK 3 PLANARITY : 0.011 2198 REMARK 3 DIHEDRAL : 26.212 8046 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): 31.0584 -26.5980 -70.5307 REMARK 3 T TENSOR REMARK 3 T11: 0.0720 T22: 0.1219 REMARK 3 T33: 0.1176 T12: -0.0053 REMARK 3 T13: -0.0496 T23: 0.1666 REMARK 3 L TENSOR REMARK 3 L11: 0.0630 L22: 0.1083 REMARK 3 L33: 0.0328 L12: -0.0177 REMARK 3 L13: 0.0094 L23: -0.0141 REMARK 3 S TENSOR REMARK 3 S11: 0.0246 S12: 0.0179 S13: -0.0124 REMARK 3 S21: -0.0609 S22: -0.0199 S23: 0.0314 REMARK 3 S31: 0.0280 S32: 0.0139 S33: 0.2802 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): 45.7443 -31.9382 -25.5884 REMARK 3 T TENSOR REMARK 3 T11: 0.0876 T22: 0.0924 REMARK 3 T33: 0.0932 T12: -0.0377 REMARK 3 T13: -0.0563 T23: 0.0853 REMARK 3 L TENSOR REMARK 3 L11: 0.0085 L22: 0.0029 REMARK 3 L33: 0.0058 L12: -0.0047 REMARK 3 L13: 0.0051 L23: -0.0038 REMARK 3 S TENSOR REMARK 3 S11: -0.0210 S12: 0.0074 S13: 0.0227 REMARK 3 S21: 0.0232 S22: -0.0248 S23: -0.0282 REMARK 3 S31: -0.0248 S32: 0.0370 S33: -0.2463 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'G') OR (CHAIN 'F') REMARK 3 ORIGIN FOR THE GROUP (A): 57.3005 -32.4518 0.8700 REMARK 3 T TENSOR REMARK 3 T11: 0.4292 T22: 0.2030 REMARK 3 T33: 0.2446 T12: 0.0257 REMARK 3 T13: -0.0896 T23: 0.0773 REMARK 3 L TENSOR REMARK 3 L11: 0.0840 L22: 0.0059 REMARK 3 L33: 0.0314 L12: -0.0222 REMARK 3 L13: -0.0521 L23: 0.0133 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: -0.0506 S13: 0.0206 REMARK 3 S21: 0.0586 S22: -0.0021 S23: -0.0174 REMARK 3 S31: -0.0797 S32: 0.0639 S33: 0.0437 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE MODEL WAS REFINED USING ITERATIVE REMARK 3 CYCLES OF TLS AND RESTRAINED REFINEMENT (INCLUDING SECONDARY REMARK 3 STRUCTURE, GEOMETRY, AND TORSION ANGLE RESTRAINTS) THROUGH REMARK 3 PHENIX. CAREFUL INSPECTION OF WEIGHTED AND UNWEIGHTED MAPS, IN REMARK 3 PARTICULAR, THE DIFFERENCE FOURIER MAPS, AFTER EACH REFINEMENT REMARK 3 ROUND VERIFIED CORRECTNESS OF REGIONS MODIFIED OR EXTENDED IN REMARK 3 THE PREVIOUS CYCLE. PROGRAMMATIC DIFFERENCES IN THE APPLICATION REMARK 3 AND SCALING OF TLS PARAMETERS MAY RESULT IN VARIATIONS IN THE REMARK 3 MAPS CALCULATED USING THE SF DIRECTLY DOWNLOADED FROM THE REMARK 3 DATABASE. CALCULATING STRUCTURE FACTORS (SF) USING MODEL REMARK 3 COORDINATES AND THERMAL PARAMETERS FROM THE DEPOSITED PDB FILES REMARK 3 IN PHENIX WILL REPRODUCE THE MAPS AND CONFORMATIONAL FEATURES REMARK 3 DESCRIBED BY THE AUTHORS IN THE CITATION. REMARK 4 REMARK 4 4E5Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000071211. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : MONOCHROMATORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33928 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 41.093 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 77.8 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.11700 REMARK 200 R SYM FOR SHELL (I) : 0.35800 REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: 3EI2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM TRIS PH 7.5, 2MM MGCL2, 1MM EDTA, REMARK 280 2MM TECP, 5% GLYCEROL, 0.02% AZIDE. UV-DDB-AP24 COMPLEX (MOLAR REMARK 280 RATIO OF 1:3 UV-DDB:DNA) AT 2.5 MG/ML. 'AP24' REFERS TO REMARK 280 SYNTHETIC DNA SUBSTRATE OF 24-BPR WITH A CENTRAL ABASIC SITE REMARK 280 MIMIC., VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 36.20900 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 194.86900 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 36.20900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 194.86900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 74300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET B -7 REMARK 465 ASP B -6 REMARK 465 TYR B -5 REMARK 465 LYS B -4 REMARK 465 ASP B -3 REMARK 465 ASP B -2 REMARK 465 ASP B -1 REMARK 465 ASP B 0 REMARK 465 LYS B 1 REMARK 465 ALA B 2 REMARK 465 PRO B 3 REMARK 465 LYS B 4 REMARK 465 LYS B 5 REMARK 465 ARG B 6 REMARK 465 PRO B 7 REMARK 465 GLU B 8 REMARK 465 THR B 9 REMARK 465 GLN B 10 REMARK 465 LYS B 11 REMARK 465 THR B 12 REMARK 465 SER B 13 REMARK 465 GLU B 14 REMARK 465 ILE B 15 REMARK 465 VAL B 16 REMARK 465 LEU B 17 REMARK 465 ARG B 18 REMARK 465 PRO B 19 REMARK 465 GLU B 422 REMARK 465 GLU B 423 REMARK 465 ALA B 424 REMARK 465 ARG B 425 REMARK 465 THR B 426 REMARK 465 ARG B 427 REMARK 465 LYS B 428 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 289 CG CD OE1 OE2 REMARK 470 ASP A 292 CG OD1 OD2 REMARK 470 ARG A 369 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 769 CG CD CE NZ REMARK 470 PHE A 771 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 774 OG REMARK 470 PRO A 777 CG CD REMARK 470 HIS A 778 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 779 CG CD OE1 OE2 REMARK 470 PHE A 782 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 993 CG CD OE1 NE2 REMARK 470 MET A1014 CG SD CE REMARK 470 LEU A1017 CG CD1 CD2 REMARK 470 THR A1022 OG1 CG2 REMARK 470 MET A1054 CG SD CE REMARK 470 LEU A1112 CG CD1 CD2 REMARK 470 LYS A1121 CG CD CE NZ REMARK 470 THR A1125 OG1 CG2 REMARK 470 GLU A1135 CG CD OE1 OE2 REMARK 470 GLN B 421 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 18 CB CYS A 313 1.77 REMARK 500 O GLN A 234 N SER A 236 2.03 REMARK 500 OE1 GLU A 288 OG1 THR A 296 2.06 REMARK 500 O LYS B 244 OG SER B 262 2.07 REMARK 500 O LYS A 287 NZ LYS A 298 2.08 REMARK 500 NH1 ARG A 414 OG1 THR A 421 2.09 REMARK 500 OD2 ASP A 824 OH TYR A 828 2.10 REMARK 500 OG SER B 363 OE2 GLU B 368 2.11 REMARK 500 O ASN A 1111 N TYR A 1114 2.14 REMARK 500 O LEU A 413 N ASP A 423 2.14 REMARK 500 NH1 ARG B 112 OP1 3DR G 11 2.14 REMARK 500 OE2 GLU A 213 OG SER A 236 2.15 REMARK 500 O ARG B 276 N LYS B 278 2.15 REMARK 500 O PHE A 596 OG SER A 599 2.15 REMARK 500 OE1 GLN A 507 OH TYR A 518 2.16 REMARK 500 NE2 GLN A 520 O ARG A 527 2.16 REMARK 500 NH1 ARG A 847 OE1 GLU A 863 2.18 REMARK 500 O TYR A 58 NZ LYS A 83 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 339 OG SER A 1046 1455 2.16 REMARK 500 OG SER B 42 O LYS B 187 1455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP B 256 CG TRP B 256 CD2 -0.109 REMARK 500 TRP B 256 CG TRP B 256 CD1 0.108 REMARK 500 DT F 1 P DT F 1 OP3 -0.129 REMARK 500 DG G 1 P DG G 1 OP3 -0.128 REMARK 500 DC G 9 O3' DG G 10 P 0.149 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 410 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 MET B 240 CG - SD - CE ANGL. DEV. = -10.6 DEGREES REMARK 500 TRP B 256 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 LEU B 272 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 ARG B 273 CG - CD - NE ANGL. DEV. = -19.1 DEGREES REMARK 500 ARG B 273 CD - NE - CZ ANGL. DEV. = 9.5 DEGREES REMARK 500 DT F 1 OP1 - P - OP2 ANGL. DEV. = -12.2 DEGREES REMARK 500 DA F 3 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC F 4 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DA F 11 O4' - C4' - C3' ANGL. DEV. = -2.9 DEGREES REMARK 500 DT F 12 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DA F 23 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG G 1 OP1 - P - OP2 ANGL. DEV. = -12.4 DEGREES REMARK 500 DC G 9 C3' - O3' - P ANGL. DEV. = -16.2 DEGREES REMARK 500 DG G 10 O3' - P - OP2 ANGL. DEV. = 9.2 DEGREES REMARK 500 DA G 16 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC G 23 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DA G 24 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 9 -76.82 -92.50 REMARK 500 ASN A 16 -73.49 -78.85 REMARK 500 LYS A 35 79.78 -117.96 REMARK 500 ASN A 36 -90.78 61.61 REMARK 500 THR A 45 -168.94 -122.98 REMARK 500 LYS A 74 -98.64 -134.97 REMARK 500 ASP A 75 115.23 179.38 REMARK 500 GLN A 109 -168.66 175.89 REMARK 500 ASP A 125 143.43 66.85 REMARK 500 GLU A 199 -16.42 63.71 REMARK 500 GLU A 213 -132.86 33.89 REMARK 500 ALA A 214 -3.93 -174.07 REMARK 500 GLU A 215 23.21 -152.44 REMARK 500 PRO A 223 -169.19 -77.23 REMARK 500 PHE A 226 -112.79 -163.79 REMARK 500 GLN A 234 -141.44 -75.87 REMARK 500 GLU A 235 -16.35 7.28 REMARK 500 ASN A 241 -162.29 -119.50 REMARK 500 ASN A 262 129.78 -172.45 REMARK 500 MET A 291 -145.34 43.00 REMARK 500 THR A 294 -80.27 -140.73 REMARK 500 VAL A 295 131.15 130.61 REMARK 500 THR A 296 -173.33 -172.41 REMARK 500 ASP A 299 -168.73 57.47 REMARK 500 GLU A 303 -15.75 41.54 REMARK 500 LEU A 304 89.64 56.57 REMARK 500 THR A 308 -169.32 -122.78 REMARK 500 LEU A 317 -87.35 -115.09 REMARK 500 ASN A 341 -153.52 -94.33 REMARK 500 SER A 345 107.77 59.05 REMARK 500 LEU A 367 171.13 -51.42 REMARK 500 GLU A 368 -74.87 57.80 REMARK 500 ARG A 369 29.75 -71.82 REMARK 500 GLN A 370 -54.58 30.95 REMARK 500 GLN A 372 -28.34 -150.91 REMARK 500 GLN A 374 -20.04 82.96 REMARK 500 ALA A 381 137.24 76.67 REMARK 500 PHE A 382 -155.23 70.04 REMARK 500 LEU A 404 109.02 -162.66 REMARK 500 LEU A 413 154.54 162.71 REMARK 500 GLU A 420 77.81 74.28 REMARK 500 THR A 421 -167.66 179.67 REMARK 500 ASP A 423 -141.66 -119.02 REMARK 500 THR A 424 76.56 17.04 REMARK 500 ASN A 439 116.40 -161.42 REMARK 500 VAL A 443 -74.87 -116.56 REMARK 500 GLU A 444 -143.52 61.16 REMARK 500 GLU A 445 -66.83 -128.72 REMARK 500 THR A 446 -169.02 61.38 REMARK 500 CYS A 460 -145.09 -162.69 REMARK 500 REMARK 500 THIS ENTRY HAS 240 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU B 28 GLU B 29 31.55 REMARK 500 GLU B 29 LEU B 30 149.92 REMARK 500 LEU B 63 PRO B 64 146.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4E54 RELATED DB: PDB REMARK 900 DAMAGED DNA INDUCED UV-DAMAGED DNA-BINDING PROTEIN (UV-DDB) REMARK 900 DIMERIZATION AND ITS ROLES IN CHROMATINIZED DNA REPAIR DBREF 4E5Z A 2 1140 UNP Q16531 DDB1_HUMAN 2 1140 DBREF 4E5Z B 2 428 UNP Q92466 DDB2_HUMAN 2 427 DBREF 4E5Z F 1 24 PDB 4E5Z 4E5Z 1 24 DBREF 4E5Z G 1 24 PDB 4E5Z 4E5Z 1 24 SEQADV 4E5Z MET A -9 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A -8 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A -7 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A -6 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A -5 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A -4 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A -3 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A -2 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A -1 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A 0 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z HIS A 1 UNP Q16531 EXPRESSION TAG SEQADV 4E5Z MET B -7 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z ASP B -6 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z TYR B -5 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z LYS B -4 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z ASP B -3 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z ASP B -2 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z ASP B -1 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z ASP B 0 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z LYS B 1 UNP Q92466 EXPRESSION TAG SEQADV 4E5Z GLU B 420 UNP Q92466 EXPRESSION TAG SEQRES 1 A 1150 MET HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SER TYR SEQRES 2 A 1150 ASN TYR VAL VAL THR ALA GLN LYS PRO THR ALA VAL ASN SEQRES 3 A 1150 GLY CYS VAL THR GLY HIS PHE THR SER ALA GLU ASP LEU SEQRES 4 A 1150 ASN LEU LEU ILE ALA LYS ASN THR ARG LEU GLU ILE TYR SEQRES 5 A 1150 VAL VAL THR ALA GLU GLY LEU ARG PRO VAL LYS GLU VAL SEQRES 6 A 1150 GLY MET TYR GLY LYS ILE ALA VAL MET GLU LEU PHE ARG SEQRES 7 A 1150 PRO LYS GLY GLU SER LYS ASP LEU LEU PHE ILE LEU THR SEQRES 8 A 1150 ALA LYS TYR ASN ALA CYS ILE LEU GLU TYR LYS GLN SER SEQRES 9 A 1150 GLY GLU SER ILE ASP ILE ILE THR ARG ALA HIS GLY ASN SEQRES 10 A 1150 VAL GLN ASP ARG ILE GLY ARG PRO SER GLU THR GLY ILE SEQRES 11 A 1150 ILE GLY ILE ILE ASP PRO GLU CYS ARG MET ILE GLY LEU SEQRES 12 A 1150 ARG LEU TYR ASP GLY LEU PHE LYS VAL ILE PRO LEU ASP SEQRES 13 A 1150 ARG ASP ASN LYS GLU LEU LYS ALA PHE ASN ILE ARG LEU SEQRES 14 A 1150 GLU GLU LEU HIS VAL ILE ASP VAL LYS PHE LEU TYR GLY SEQRES 15 A 1150 CYS GLN ALA PRO THR ILE CYS PHE VAL TYR GLN ASP PRO SEQRES 16 A 1150 GLN GLY ARG HIS VAL LYS THR TYR GLU VAL SER LEU ARG SEQRES 17 A 1150 GLU LYS GLU PHE ASN LYS GLY PRO TRP LYS GLN GLU ASN SEQRES 18 A 1150 VAL GLU ALA GLU ALA SER MET VAL ILE ALA VAL PRO GLU SEQRES 19 A 1150 PRO PHE GLY GLY ALA ILE ILE ILE GLY GLN GLU SER ILE SEQRES 20 A 1150 THR TYR HIS ASN GLY ASP LYS TYR LEU ALA ILE ALA PRO SEQRES 21 A 1150 PRO ILE ILE LYS GLN SER THR ILE VAL CYS HIS ASN ARG SEQRES 22 A 1150 VAL ASP PRO ASN GLY SER ARG TYR LEU LEU GLY ASP MET SEQRES 23 A 1150 GLU GLY ARG LEU PHE MET LEU LEU LEU GLU LYS GLU GLU SEQRES 24 A 1150 GLN MET ASP GLY THR VAL THR LEU LYS ASP LEU ARG VAL SEQRES 25 A 1150 GLU LEU LEU GLY GLU THR SER ILE ALA GLU CYS LEU THR SEQRES 26 A 1150 TYR LEU ASP ASN GLY VAL VAL PHE VAL GLY SER ARG LEU SEQRES 27 A 1150 GLY ASP SER GLN LEU VAL LYS LEU ASN VAL ASP SER ASN SEQRES 28 A 1150 GLU GLN GLY SER TYR VAL VAL ALA MET GLU THR PHE THR SEQRES 29 A 1150 ASN LEU GLY PRO ILE VAL ASP MET CYS VAL VAL ASP LEU SEQRES 30 A 1150 GLU ARG GLN GLY GLN GLY GLN LEU VAL THR CYS SER GLY SEQRES 31 A 1150 ALA PHE LYS GLU GLY SER LEU ARG ILE ILE ARG ASN GLY SEQRES 32 A 1150 ILE GLY ILE HIS GLU HIS ALA SER ILE ASP LEU PRO GLY SEQRES 33 A 1150 ILE LYS GLY LEU TRP PRO LEU ARG SER ASP PRO ASN ARG SEQRES 34 A 1150 GLU THR ASP ASP THR LEU VAL LEU SER PHE VAL GLY GLN SEQRES 35 A 1150 THR ARG VAL LEU MET LEU ASN GLY GLU GLU VAL GLU GLU SEQRES 36 A 1150 THR GLU LEU MET GLY PHE VAL ASP ASP GLN GLN THR PHE SEQRES 37 A 1150 PHE CYS GLY ASN VAL ALA HIS GLN GLN LEU ILE GLN ILE SEQRES 38 A 1150 THR SER ALA SER VAL ARG LEU VAL SER GLN GLU PRO LYS SEQRES 39 A 1150 ALA LEU VAL SER GLU TRP LYS GLU PRO GLN ALA LYS ASN SEQRES 40 A 1150 ILE SER VAL ALA SER CYS ASN SER SER GLN VAL VAL VAL SEQRES 41 A 1150 ALA VAL GLY ARG ALA LEU TYR TYR LEU GLN ILE HIS PRO SEQRES 42 A 1150 GLN GLU LEU ARG GLN ILE SER HIS THR GLU MET GLU HIS SEQRES 43 A 1150 GLU VAL ALA CYS LEU ASP ILE THR PRO LEU GLY ASP SER SEQRES 44 A 1150 ASN GLY LEU SER PRO LEU CYS ALA ILE GLY LEU TRP THR SEQRES 45 A 1150 ASP ILE SER ALA ARG ILE LEU LYS LEU PRO SER PHE GLU SEQRES 46 A 1150 LEU LEU HIS LYS GLU MET LEU GLY GLY GLU ILE ILE PRO SEQRES 47 A 1150 ARG SER ILE LEU MET THR THR PHE GLU SER SER HIS TYR SEQRES 48 A 1150 LEU LEU CYS ALA LEU GLY ASP GLY ALA LEU PHE TYR PHE SEQRES 49 A 1150 GLY LEU ASN ILE GLU THR GLY LEU LEU SER ASP ARG LYS SEQRES 50 A 1150 LYS VAL THR LEU GLY THR GLN PRO THR VAL LEU ARG THR SEQRES 51 A 1150 PHE ARG SER LEU SER THR THR ASN VAL PHE ALA CYS SER SEQRES 52 A 1150 ASP ARG PRO THR VAL ILE TYR SER SER ASN HIS LYS LEU SEQRES 53 A 1150 VAL PHE SER ASN VAL ASN LEU LYS GLU VAL ASN TYR MET SEQRES 54 A 1150 CYS PRO LEU ASN SER ASP GLY TYR PRO ASP SER LEU ALA SEQRES 55 A 1150 LEU ALA ASN ASN SER THR LEU THR ILE GLY THR ILE ASP SEQRES 56 A 1150 GLU ILE GLN LYS LEU HIS ILE ARG THR VAL PRO LEU TYR SEQRES 57 A 1150 GLU SER PRO ARG LYS ILE CYS TYR GLN GLU VAL SER GLN SEQRES 58 A 1150 CYS PHE GLY VAL LEU SER SER ARG ILE GLU VAL GLN ASP SEQRES 59 A 1150 THR SER GLY GLY THR THR ALA LEU ARG PRO SER ALA SER SEQRES 60 A 1150 THR GLN ALA LEU SER SER SER VAL SER SER SER LYS LEU SEQRES 61 A 1150 PHE SER SER SER THR ALA PRO HIS GLU THR SER PHE GLY SEQRES 62 A 1150 GLU GLU VAL GLU VAL HIS ASN LEU LEU ILE ILE ASP GLN SEQRES 63 A 1150 HIS THR PHE GLU VAL LEU HIS ALA HIS GLN PHE LEU GLN SEQRES 64 A 1150 ASN GLU TYR ALA LEU SER LEU VAL SER CYS LYS LEU GLY SEQRES 65 A 1150 LYS ASP PRO ASN THR TYR PHE ILE VAL GLY THR ALA MET SEQRES 66 A 1150 VAL TYR PRO GLU GLU ALA GLU PRO LYS GLN GLY ARG ILE SEQRES 67 A 1150 VAL VAL PHE GLN TYR SER ASP GLY LYS LEU GLN THR VAL SEQRES 68 A 1150 ALA GLU LYS GLU VAL LYS GLY ALA VAL TYR SER MET VAL SEQRES 69 A 1150 GLU PHE ASN GLY LYS LEU LEU ALA SER ILE ASN SER THR SEQRES 70 A 1150 VAL ARG LEU TYR GLU TRP THR THR GLU LYS GLU LEU ARG SEQRES 71 A 1150 THR GLU CYS ASN HIS TYR ASN ASN ILE MET ALA LEU TYR SEQRES 72 A 1150 LEU LYS THR LYS GLY ASP PHE ILE LEU VAL GLY ASP LEU SEQRES 73 A 1150 MET ARG SER VAL LEU LEU LEU ALA TYR LYS PRO MET GLU SEQRES 74 A 1150 GLY ASN PHE GLU GLU ILE ALA ARG ASP PHE ASN PRO ASN SEQRES 75 A 1150 TRP MET SER ALA VAL GLU ILE LEU ASP ASP ASP ASN PHE SEQRES 76 A 1150 LEU GLY ALA GLU ASN ALA PHE ASN LEU PHE VAL CYS GLN SEQRES 77 A 1150 LYS ASP SER ALA ALA THR THR ASP GLU GLU ARG GLN HIS SEQRES 78 A 1150 LEU GLN GLU VAL GLY LEU PHE HIS LEU GLY GLU PHE VAL SEQRES 79 A 1150 ASN VAL PHE CYS HIS GLY SER LEU VAL MET GLN ASN LEU SEQRES 80 A 1150 GLY GLU THR SER THR PRO THR GLN GLY SER VAL LEU PHE SEQRES 81 A 1150 GLY THR VAL ASN GLY MET ILE GLY LEU VAL THR SER LEU SEQRES 82 A 1150 SER GLU SER TRP TYR ASN LEU LEU LEU ASP MET GLN ASN SEQRES 83 A 1150 ARG LEU ASN LYS VAL ILE LYS SER VAL GLY LYS ILE GLU SEQRES 84 A 1150 HIS SER PHE TRP ARG SER PHE HIS THR GLU ARG LYS THR SEQRES 85 A 1150 GLU PRO ALA THR GLY PHE ILE ASP GLY ASP LEU ILE GLU SEQRES 86 A 1150 SER PHE LEU ASP ILE SER ARG PRO LYS MET GLN GLU VAL SEQRES 87 A 1150 VAL ALA ASN LEU GLN TYR ASP ASP GLY SER GLY MET LYS SEQRES 88 A 1150 ARG GLU ALA THR ALA ASP ASP LEU ILE LYS VAL VAL GLU SEQRES 89 A 1150 GLU LEU THR ARG ILE HIS SEQRES 1 B 436 MET ASP TYR LYS ASP ASP ASP ASP LYS ALA PRO LYS LYS SEQRES 2 B 436 ARG PRO GLU THR GLN LYS THR SER GLU ILE VAL LEU ARG SEQRES 3 B 436 PRO ARG ASN LYS ARG SER ARG SER PRO LEU GLU LEU GLU SEQRES 4 B 436 PRO GLU ALA LYS LYS LEU CYS ALA LYS GLY SER GLY PRO SEQRES 5 B 436 SER ARG ARG CYS ASP SER ASP CYS LEU TRP VAL GLY LEU SEQRES 6 B 436 ALA GLY PRO GLN ILE LEU PRO PRO CYS ARG SER ILE VAL SEQRES 7 B 436 ARG THR LEU HIS GLN HIS LYS LEU GLY ARG ALA SER TRP SEQRES 8 B 436 PRO SER VAL GLN GLN GLY LEU GLN GLN SER PHE LEU HIS SEQRES 9 B 436 THR LEU ASP SER TYR ARG ILE LEU GLN LYS ALA ALA PRO SEQRES 10 B 436 PHE ASP ARG ARG ALA THR SER LEU ALA TRP HIS PRO THR SEQRES 11 B 436 HIS PRO SER THR VAL ALA VAL GLY SER LYS GLY GLY ASP SEQRES 12 B 436 ILE MET LEU TRP ASN PHE GLY ILE LYS ASP LYS PRO THR SEQRES 13 B 436 PHE ILE LYS GLY ILE GLY ALA GLY GLY SER ILE THR GLY SEQRES 14 B 436 LEU LYS PHE ASN PRO LEU ASN THR ASN GLN PHE TYR ALA SEQRES 15 B 436 SER SER MET GLU GLY THR THR ARG LEU GLN ASP PHE LYS SEQRES 16 B 436 GLY ASN ILE LEU ARG VAL PHE ALA SER SER ASP THR ILE SEQRES 17 B 436 ASN ILE TRP PHE CYS SER LEU ASP VAL SER ALA SER SER SEQRES 18 B 436 ARG MET VAL VAL THR GLY ASP ASN VAL GLY ASN VAL ILE SEQRES 19 B 436 LEU LEU ASN MET ASP GLY LYS GLU LEU TRP ASN LEU ARG SEQRES 20 B 436 MET HIS LYS LYS LYS VAL THR HIS VAL ALA LEU ASN PRO SEQRES 21 B 436 CYS CYS ASP TRP PHE LEU ALA THR ALA SER VAL ASP GLN SEQRES 22 B 436 THR VAL LYS ILE TRP ASP LEU ARG GLN VAL ARG GLY LYS SEQRES 23 B 436 ALA SER PHE LEU TYR SER LEU PRO HIS ARG HIS PRO VAL SEQRES 24 B 436 ASN ALA ALA CYS PHE SER PRO ASP GLY ALA ARG LEU LEU SEQRES 25 B 436 THR THR ASP GLN LYS SER GLU ILE ARG VAL TYR SER ALA SEQRES 26 B 436 SER GLN TRP ASP CYS PRO LEU GLY LEU ILE PRO HIS PRO SEQRES 27 B 436 HIS ARG HIS PHE GLN HIS LEU THR PRO ILE LYS ALA ALA SEQRES 28 B 436 TRP HIS PRO ARG TYR ASN LEU ILE VAL VAL GLY ARG TYR SEQRES 29 B 436 PRO ASP PRO ASN PHE LYS SER CYS THR PRO TYR GLU LEU SEQRES 30 B 436 ARG THR ILE ASP VAL PHE ASP GLY ASN SER GLY LYS MET SEQRES 31 B 436 MET CYS GLN LEU TYR ASP PRO GLU SER SER GLY ILE SER SEQRES 32 B 436 SER LEU ASN GLU PHE ASN PRO MET GLY ASP THR LEU ALA SEQRES 33 B 436 SER ALA MET GLY TYR HIS ILE LEU ILE TRP SER GLU GLN SEQRES 34 B 436 GLU GLU ALA ARG THR ARG LYS SEQRES 1 F 24 DT DG DA DC DT DG DT DA DT DG DA DT DG SEQRES 2 F 24 DA DC DG DA DT DG DC DT DG DA DC SEQRES 1 G 24 DG DT DC DA DG DC DA DT DC DG 3DR DC DA SEQRES 2 G 24 DT DC DA DT DA DC DA DG DT DC DA HET 3DR G 11 11 HETNAM 3DR 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE HETSYN 3DR ABASIC DIDEOXYRIBOSE FORMUL 4 3DR C5 H11 O6 P HELIX 1 1 ALA A 381 GLU A 384 5 4 HELIX 2 2 GLU A 728 SER A 730 5 3 HELIX 3 3 GLU A 987 ARG A 989 5 3 HELIX 4 4 SER A 1044 ASN A 1059 1 16 HELIX 5 5 GLU A 1069 SER A 1075 1 7 HELIX 6 6 GLY A 1091 SER A 1096 1 6 HELIX 7 7 SER A 1101 ALA A 1110 1 10 HELIX 8 8 GLU A 1123 ASP A 1127 5 5 HELIX 9 9 ASP A 1128 ARG A 1138 1 11 HELIX 10 10 CYS B 38 GLY B 43 1 6 HELIX 11 11 ARG B 71 LEU B 78 1 8 HELIX 12 12 SER B 82 GLN B 91 1 10 HELIX 13 13 THR B 97 TYR B 101 5 5 SHEET 1 A 5 VAL A1004 HIS A1009 0 SHEET 2 A 5 GLN A1025 THR A1032 -1 O LEU A1029 N CYS A1008 SHEET 3 A 5 ILE A1037 SER A1042 -1 O VAL A1040 N VAL A1028 SHEET 4 A 5 ASN A 4 GLN A 10 -1 N ALA A 9 O ILE A1037 SHEET 5 A 5 PHE A1088 ASP A1090 1 O ILE A1089 N VAL A 6 SHEET 1 B 4 GLY A 17 GLY A 21 0 SHEET 2 B 4 ASN A 30 LYS A 35 -1 O ASN A 30 N GLY A 21 SHEET 3 B 4 ARG A 38 THR A 45 -1 O ARG A 38 N LYS A 35 SHEET 4 B 4 GLY A 48 GLY A 56 -1 O ARG A 50 N VAL A 43 SHEET 1 C 4 ILE A 61 PHE A 67 0 SHEET 2 C 4 LEU A 76 THR A 81 -1 O LEU A 80 N ALA A 62 SHEET 3 C 4 ASN A 85 SER A 94 -1 O LEU A 89 N LEU A 77 SHEET 4 C 4 SER A 97 ASN A 107 -1 O GLY A 106 N ALA A 86 SHEET 1 D 3 ILE A 121 ILE A 123 0 SHEET 2 D 3 MET A 130 ARG A 134 -1 O GLY A 132 N ILE A 123 SHEET 3 D 3 LYS A 141 PRO A 144 -1 O LYS A 141 N LEU A 133 SHEET 1 E 4 VAL A 164 PHE A 169 0 SHEET 2 E 4 THR A 177 ASP A 184 -1 O VAL A 181 N ILE A 165 SHEET 3 E 4 GLY A 187 SER A 196 -1 O TYR A 193 N ILE A 178 SHEET 4 E 4 GLU A 201 LYS A 204 -1 O ASN A 203 N GLU A 194 SHEET 1 F 4 MET A 218 ALA A 221 0 SHEET 2 F 4 ALA A 229 ILE A 232 -1 O ILE A 230 N ILE A 220 SHEET 3 F 4 ILE A 237 HIS A 240 -1 O THR A 238 N ILE A 231 SHEET 4 F 4 TYR A 245 ILE A 248 -1 O LEU A 246 N TYR A 239 SHEET 1 G 4 ILE A 258 CYS A 260 0 SHEET 2 G 4 ARG A 270 ASP A 275 -1 O GLY A 274 N VAL A 259 SHEET 3 G 4 ARG A 279 LYS A 287 -1 O PHE A 281 N LEU A 273 SHEET 4 G 4 LEU A 297 ARG A 301 -1 O ARG A 301 N LEU A 284 SHEET 1 H 4 ILE A 258 CYS A 260 0 SHEET 2 H 4 ARG A 270 ASP A 275 -1 O GLY A 274 N VAL A 259 SHEET 3 H 4 ARG A 279 LYS A 287 -1 O PHE A 281 N LEU A 273 SHEET 4 H 4 GLY A 306 GLU A 307 -1 O GLY A 306 N LEU A 280 SHEET 1 I 4 CYS A 313 TYR A 316 0 SHEET 2 I 4 VAL A 321 GLY A 325 -1 O PHE A 323 N THR A 315 SHEET 3 I 4 SER A 331 LEU A 336 -1 O GLN A 332 N VAL A 324 SHEET 4 I 4 VAL A 347 PHE A 353 -1 O VAL A 348 N LYS A 335 SHEET 1 J 4 CYS A 363 VAL A 364 0 SHEET 2 J 4 VAL A 376 SER A 379 -1 O THR A 377 N CYS A 363 SHEET 3 J 4 SER A 386 ASN A 392 -1 O ILE A 390 N VAL A 376 SHEET 4 J 4 LEU A 710 PRO A 716 -1 O ARG A 713 N ILE A 389 SHEET 1 K 3 ILE A 407 LEU A 413 0 SHEET 2 K 3 ASP A 423 PHE A 429 -1 O ASP A 423 N LEU A 413 SHEET 3 K 3 THR A 433 LEU A 436 -1 O LEU A 436 N LEU A 425 SHEET 1 L 4 ASN A 462 VAL A 463 0 SHEET 2 L 4 GLN A 467 GLN A 470 -1 O GLN A 467 N VAL A 463 SHEET 3 L 4 VAL A 476 VAL A 479 -1 O VAL A 479 N LEU A 468 SHEET 4 L 4 GLU A 489 TRP A 490 -1 O TRP A 490 N VAL A 476 SHEET 1 M 3 LEU A 541 ASP A 542 0 SHEET 2 M 3 LEU A 555 ILE A 558 -1 O ALA A 557 N ASP A 542 SHEET 3 M 3 ARG A 567 LYS A 570 -1 O LEU A 569 N CYS A 556 SHEET 1 N 4 ILE A 591 LEU A 592 0 SHEET 2 N 4 LEU A 603 CYS A 604 -1 O LEU A 603 N LEU A 592 SHEET 3 N 4 LEU A 611 ASN A 617 -1 O PHE A 612 N CYS A 604 SHEET 4 N 4 LEU A 622 VAL A 629 -1 O LYS A 627 N TYR A 613 SHEET 1 O 2 THR A 595 PHE A 596 0 SHEET 2 O 2 SER A 599 HIS A 600 -1 O SER A 599 N PHE A 596 SHEET 1 P 2 ILE A 659 SER A 662 0 SHEET 2 P 2 LYS A 665 PHE A 668 -1 O LYS A 665 N SER A 662 SHEET 1 Q 2 MET A 679 SER A 684 0 SHEET 2 Q 2 TYR A 687 LEU A 693 -1 O ALA A 692 N CYS A 680 SHEET 1 R 5 SER A 720 GLN A 727 0 SHEET 2 R 5 CYS A 732 ILE A 740 -1 O LEU A 736 N ARG A 722 SHEET 3 R 5 GLU A 787 ASP A 795 -1 O ASN A 790 N SER A 737 SHEET 4 R 5 VAL A 801 GLN A 806 -1 O HIS A 803 N ILE A 793 SHEET 5 R 5 SER A 764 VAL A 765 1 N SER A 764 O ALA A 804 SHEET 1 S 4 GLU A 811 LYS A 820 0 SHEET 2 S 4 THR A 827 MET A 835 -1 O ALA A 834 N TYR A 812 SHEET 3 S 4 GLY A 846 GLN A 852 -1 O PHE A 851 N PHE A 829 SHEET 4 S 4 GLN A 859 THR A 860 -1 O GLN A 859 N GLN A 852 SHEET 1 T 4 GLU A 811 LYS A 820 0 SHEET 2 T 4 THR A 827 MET A 835 -1 O ALA A 834 N TYR A 812 SHEET 3 T 4 GLY A 846 GLN A 852 -1 O PHE A 851 N PHE A 829 SHEET 4 T 4 LYS A 864 VAL A 866 -1 O LYS A 864 N ILE A 848 SHEET 1 U 4 VAL A 870 PHE A 876 0 SHEET 2 U 4 LYS A 879 ILE A 884 -1 O LYS A 879 N PHE A 876 SHEET 3 U 4 THR A 887 TRP A 893 -1 O THR A 887 N ILE A 884 SHEET 4 U 4 LEU A 899 HIS A 905 -1 O ARG A 900 N GLU A 892 SHEET 1 V 8 ALA A 911 LYS A 917 0 SHEET 2 V 8 PHE A 920 ASP A 925 -1 O LEU A 922 N LYS A 915 SHEET 3 V 8 SER A 929 LEU A 933 -1 O LEU A 933 N ILE A 921 SHEET 4 V 8 GLU A 944 ASP A 948 -1 O ALA A 946 N LEU A 932 SHEET 5 V 8 HIS A 991 HIS A 999 1 O LEU A 992 N ARG A 947 SHEET 6 V 8 ASN A 973 GLN A 978 -1 N LEU A 974 O PHE A 998 SHEET 7 V 8 ASN A 964 GLU A 969 -1 N GLY A 967 O PHE A 975 SHEET 8 V 8 MET A 954 ILE A 959 -1 N GLU A 958 O LEU A 966 SHEET 1 W 2 PHE A1076 HIS A1077 0 SHEET 2 W 2 THR A1082 GLU A1083 -1 O GLU A1083 N PHE A1076 SHEET 1 X 3 LEU B 104 ALA B 107 0 SHEET 2 X 3 HIS B 414 TRP B 418 -1 O ILE B 417 N LYS B 106 SHEET 3 X 3 LEU B 407 MET B 411 -1 N LEU B 407 O TRP B 418 SHEET 1 Y 4 ALA B 114 TRP B 119 0 SHEET 2 Y 4 THR B 126 SER B 131 -1 O ALA B 128 N ALA B 118 SHEET 3 Y 4 ILE B 136 ASN B 140 -1 O TRP B 139 N VAL B 127 SHEET 4 Y 4 THR B 148 ILE B 150 -1 O THR B 148 N LEU B 138 SHEET 1 Z 4 ILE B 159 PHE B 164 0 SHEET 2 Z 4 GLN B 171 SER B 176 -1 O SER B 175 N THR B 160 SHEET 3 Z 4 THR B 181 ASP B 185 -1 O GLN B 184 N PHE B 172 SHEET 4 Z 4 ILE B 190 ALA B 195 -1 O LEU B 191 N LEU B 183 SHEET 1 AA 3 LEU B 207 SER B 210 0 SHEET 2 AA 3 MET B 215 THR B 218 -1 O VAL B 217 N ASP B 208 SHEET 3 AA 3 ILE B 226 LEU B 228 -1 O ILE B 226 N THR B 218 SHEET 1 AB 4 HIS B 247 ASN B 251 0 SHEET 2 AB 4 ASP B 255 SER B 262 -1 O ASP B 255 N ASN B 251 SHEET 3 AB 4 THR B 266 VAL B 267 -1 N THR B 266 O SER B 262 SHEET 4 AB 4 LEU B 285 PRO B 286 -1 O LEU B 285 N VAL B 267 SHEET 1 AC 2 ILE B 312 TYR B 315 0 SHEET 2 AC 2 PRO B 323 ILE B 327 -1 O ILE B 327 N ILE B 312 SHEET 1 AD 4 ALA B 343 TRP B 344 0 SHEET 2 AD 4 LEU B 350 GLY B 354 -1 O VAL B 352 N ALA B 343 SHEET 3 AD 4 ILE B 372 ASP B 376 -1 O ASP B 373 N VAL B 353 SHEET 4 AD 4 MET B 382 LEU B 386 -1 O MET B 383 N VAL B 374 SSBOND 1 CYS A 18 CYS A 313 1555 1555 2.03 LINK O3' DG G 10 P 3DR G 11 1555 1555 1.60 CISPEP 1 ASP A 148 ASN A 149 0 18.73 CISPEP 2 GLU A 224 PRO A 225 0 1.08 CISPEP 3 GLY A 357 PRO A 358 0 -4.05 CISPEP 4 SER A 549 ASN A 550 0 0.01 CISPEP 5 ASN A 550 GLY A 551 0 11.19 CISPEP 6 LEU A 571 PRO A 572 0 -0.34 CISPEP 7 SER A 768 LYS A 769 0 12.37 CISPEP 8 PHE A 771 SER A 772 0 10.68 CISPEP 9 ASN A 1016 LEU A 1017 0 4.80 CISPEP 10 GLY A 1018 GLU A 1019 0 5.27 CISPEP 11 THR A 1020 SER A 1021 0 16.79 CISPEP 12 ILE A 1062 LYS A 1063 0 17.53 CISPEP 13 GLU B 31 PRO B 32 0 -0.34 CISPEP 14 ARG B 47 CYS B 48 0 6.17 CISPEP 15 LEU B 53 TRP B 54 0 -6.00 CISPEP 16 PRO B 366 TYR B 367 0 5.99 CRYST1 72.418 76.504 389.738 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013809 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013071 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002566 0.00000