HEADER RECOMBINATION/DNA 17-MAR-12 4E7K TITLE PFV INTEGRASE TARGET CAPTURE COMPLEX (TCC-MN), FREEZE-TRAPPED PRIOR TO TITLE 2 STRAND TRANSFER, AT 3.0 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRO-POL POLYPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 752-1143; COMPND 5 SYNONYM: PR125POL, PROTEASE/REVERSE TRANSCRIPTASE/RIBONUCLEASE H, COMPND 6 P87PRO-RT-RNASEH, PROTEASE/REVERSE TRANSCRIPTASE, P65PRO-RT, COMPND 7 RIBONUCLEASE H, RNASE H, INTEGRASE, IN, P42IN; COMPND 8 EC: 2.7.7.49, 2.7.7.7, 3.1.26.4, 3.4.23.-; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA (5'- COMPND 12 D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'); COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: TARGET DNA; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: DNA (5'- COMPND 18 D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'); COMPND 19 CHAIN: D; COMPND 20 ENGINEERED: YES; COMPND 21 OTHER_DETAILS: VIRAL DNA; COMPND 22 MOL_ID: 4; COMPND 23 MOLECULE: DNA (5'- COMPND 24 D(*CP*CP*CP*GP*AP*GP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*GP*CP*AP*CP*GP*TP* COMPND 25 GP*CP*CP*TP*CP*GP*GP*G)-3'); COMPND 26 CHAIN: T; COMPND 27 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN SPUMARETROVIRUS; SOURCE 3 ORGANISM_COMMON: SFVCPZ(HU); SOURCE 4 ORGANISM_TAXID: 11963; SOURCE 5 STRAIN: HSRV2; SOURCE 6 GENE: POL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: PC2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PSSH6P-PFV-INFL; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC DNA; SOURCE 15 ORGANISM_TAXID: 32630; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC DNA; SOURCE 19 ORGANISM_TAXID: 32630; SOURCE 20 MOL_ID: 4; SOURCE 21 SYNTHETIC: YES; SOURCE 22 ORGANISM_SCIENTIFIC: SYNTHETIC DNA; SOURCE 23 ORGANISM_TAXID: 32630 KEYWDS PROTEIN-DNA COMPLEX, TETRAMER, HHCC MOTIF, ENDONUCLEASE, METAL- KEYWDS 2 BINDING, MULTIFUNCTIONAL ENZYME, NUCLEASE, NUCLEOTIDYLTRANSFERASE, KEYWDS 3 NUCLEUS, TRANSFERASE, VIRION, DNA-BINDING, ZINC-BINDING, VIRAL KEYWDS 4 PROTEIN, RECOMBINATION, VIRAL PROTEIN-DNA COMPLEX, RECOMBINATION-DNA KEYWDS 5 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.N.MAERTENS,P.CHEREPANOV REVDAT 3 13-SEP-23 4E7K 1 REMARK SEQADV LINK REVDAT 2 25-JUL-12 4E7K 1 JRNL REVDAT 1 23-MAY-12 4E7K 0 JRNL AUTH S.HARE,G.N.MAERTENS,P.CHEREPANOV JRNL TITL 3'-PROCESSING AND STRAND TRANSFER CATALYSED BY RETROVIRAL JRNL TITL 2 INTEGRASE IN CRYSTALLO. JRNL REF EMBO J. V. 31 3020 2012 JRNL REFN ISSN 0261-4189 JRNL PMID 22580823 JRNL DOI 10.1038/EMBOJ.2012.118 REMARK 2 REMARK 2 RESOLUTION. 3.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 35032 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1737 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0119 - 6.9014 0.98 2942 151 0.2184 0.2271 REMARK 3 2 6.9014 - 5.4831 1.00 2843 137 0.2250 0.2854 REMARK 3 3 5.4831 - 4.7916 1.00 2815 154 0.2104 0.2473 REMARK 3 4 4.7916 - 4.3541 1.00 2744 165 0.2007 0.2458 REMARK 3 5 4.3541 - 4.0424 1.00 2783 156 0.2235 0.2922 REMARK 3 6 4.0424 - 3.8043 1.00 2744 147 0.2579 0.3212 REMARK 3 7 3.8043 - 3.6140 1.00 2764 141 0.2694 0.3325 REMARK 3 8 3.6140 - 3.4568 0.99 2715 165 0.2789 0.3139 REMARK 3 9 3.4568 - 3.3238 1.00 2739 125 0.2925 0.3420 REMARK 3 10 3.3238 - 3.2091 1.00 2758 139 0.3093 0.3851 REMARK 3 11 3.2091 - 3.1088 0.99 2729 133 0.3311 0.3664 REMARK 3 12 3.1088 - 3.0200 0.99 2719 124 0.3603 0.3926 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 36.01 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.25260 REMARK 3 B22 (A**2) : 10.25260 REMARK 3 B33 (A**2) : -20.50530 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5544 REMARK 3 ANGLE : 1.313 7786 REMARK 3 CHIRALITY : 0.073 881 REMARK 3 PLANARITY : 0.007 801 REMARK 3 DIHEDRAL : 20.410 2116 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4E7K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071268. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35032 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.020 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.44900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3OS2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 34% PEG-400, 180MM LI2SO4,2.5MM EDTA, REMARK 280 100MM TRIS-HCL, PH 7.4, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.83750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 81.95700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 81.95700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.41875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 81.95700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 81.95700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 97.25625 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 81.95700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 81.95700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.41875 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 81.95700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 81.95700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 97.25625 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 64.83750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 58890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -154.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -64.83750 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 CYS A 1 REMARK 465 ASN A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 ASN A 7 REMARK 465 LEU A 8 REMARK 465 GLN A 375 REMARK 465 ASN A 376 REMARK 465 GLY A 377 REMARK 465 THR A 378 REMARK 465 THR A 379 REMARK 465 ASN A 380 REMARK 465 ASP A 381 REMARK 465 THR A 382 REMARK 465 ALA A 383 REMARK 465 THR A 384 REMARK 465 MET A 385 REMARK 465 ASP A 386 REMARK 465 HIS A 387 REMARK 465 LEU A 388 REMARK 465 GLU A 389 REMARK 465 LYS A 390 REMARK 465 ASN A 391 REMARK 465 GLU A 392 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 GLY B 0 REMARK 465 CYS B 1 REMARK 465 ASN B 2 REMARK 465 THR B 3 REMARK 465 LYS B 4 REMARK 465 LYS B 5 REMARK 465 PRO B 6 REMARK 465 ASN B 7 REMARK 465 LEU B 8 REMARK 465 ASP B 9 REMARK 465 ALA B 10 REMARK 465 GLU B 11 REMARK 465 LEU B 12 REMARK 465 ASP B 13 REMARK 465 GLN B 14 REMARK 465 LEU B 15 REMARK 465 LEU B 16 REMARK 465 GLN B 17 REMARK 465 GLY B 18 REMARK 465 HIS B 19 REMARK 465 TYR B 20 REMARK 465 ILE B 21 REMARK 465 LYS B 22 REMARK 465 GLY B 23 REMARK 465 TYR B 24 REMARK 465 PRO B 25 REMARK 465 LYS B 26 REMARK 465 GLN B 27 REMARK 465 TYR B 28 REMARK 465 THR B 29 REMARK 465 TYR B 30 REMARK 465 PHE B 31 REMARK 465 LEU B 32 REMARK 465 GLU B 33 REMARK 465 ASP B 34 REMARK 465 GLY B 35 REMARK 465 LYS B 36 REMARK 465 VAL B 37 REMARK 465 LYS B 38 REMARK 465 VAL B 39 REMARK 465 SER B 40 REMARK 465 ARG B 41 REMARK 465 PRO B 42 REMARK 465 GLU B 43 REMARK 465 GLY B 44 REMARK 465 VAL B 45 REMARK 465 LYS B 46 REMARK 465 ILE B 47 REMARK 465 ILE B 48 REMARK 465 PRO B 49 REMARK 465 PRO B 50 REMARK 465 GLN B 51 REMARK 465 SER B 52 REMARK 465 ASP B 53 REMARK 465 ARG B 54 REMARK 465 GLN B 55 REMARK 465 LYS B 56 REMARK 465 ILE B 57 REMARK 465 VAL B 58 REMARK 465 LEU B 59 REMARK 465 GLN B 60 REMARK 465 ALA B 61 REMARK 465 HIS B 62 REMARK 465 ASN B 63 REMARK 465 LEU B 64 REMARK 465 ALA B 65 REMARK 465 HIS B 66 REMARK 465 THR B 67 REMARK 465 GLY B 68 REMARK 465 ARG B 69 REMARK 465 GLU B 70 REMARK 465 ALA B 71 REMARK 465 THR B 72 REMARK 465 LEU B 73 REMARK 465 LEU B 74 REMARK 465 LYS B 75 REMARK 465 ILE B 76 REMARK 465 ALA B 77 REMARK 465 ASN B 78 REMARK 465 LEU B 79 REMARK 465 TYR B 80 REMARK 465 TRP B 81 REMARK 465 TRP B 82 REMARK 465 PRO B 83 REMARK 465 ASN B 84 REMARK 465 MET B 85 REMARK 465 ARG B 86 REMARK 465 LYS B 87 REMARK 465 ASP B 88 REMARK 465 VAL B 89 REMARK 465 VAL B 90 REMARK 465 LYS B 91 REMARK 465 GLN B 92 REMARK 465 LEU B 93 REMARK 465 GLY B 94 REMARK 465 ARG B 95 REMARK 465 CYS B 96 REMARK 465 GLN B 97 REMARK 465 GLN B 98 REMARK 465 CYS B 99 REMARK 465 LEU B 100 REMARK 465 ILE B 101 REMARK 465 THR B 102 REMARK 465 ASN B 103 REMARK 465 ALA B 104 REMARK 465 SER B 105 REMARK 465 ASN B 106 REMARK 465 LYS B 107 REMARK 465 ALA B 108 REMARK 465 SER B 109 REMARK 465 GLY B 110 REMARK 465 PRO B 111 REMARK 465 ILE B 112 REMARK 465 LEU B 113 REMARK 465 ARG B 114 REMARK 465 PRO B 115 REMARK 465 ALA B 279 REMARK 465 ASN B 280 REMARK 465 GLN B 281 REMARK 465 ASP B 282 REMARK 465 THR B 283 REMARK 465 LEU B 284 REMARK 465 ASP B 285 REMARK 465 LEU B 286 REMARK 465 THR B 287 REMARK 465 ARG B 288 REMARK 465 GLU B 289 REMARK 465 GLU B 290 REMARK 465 GLU B 291 REMARK 465 LEU B 292 REMARK 465 SER B 293 REMARK 465 LEU B 294 REMARK 465 LEU B 295 REMARK 465 GLN B 296 REMARK 465 GLU B 297 REMARK 465 ILE B 298 REMARK 465 ARG B 299 REMARK 465 THR B 300 REMARK 465 SER B 301 REMARK 465 LEU B 302 REMARK 465 TYR B 303 REMARK 465 HIS B 304 REMARK 465 PRO B 305 REMARK 465 SER B 306 REMARK 465 THR B 307 REMARK 465 PRO B 308 REMARK 465 PRO B 309 REMARK 465 ALA B 310 REMARK 465 SER B 311 REMARK 465 SER B 312 REMARK 465 ARG B 313 REMARK 465 SER B 314 REMARK 465 TRP B 315 REMARK 465 SER B 316 REMARK 465 PRO B 317 REMARK 465 VAL B 318 REMARK 465 VAL B 319 REMARK 465 GLY B 320 REMARK 465 GLN B 321 REMARK 465 LEU B 322 REMARK 465 VAL B 323 REMARK 465 GLN B 324 REMARK 465 GLU B 325 REMARK 465 ARG B 326 REMARK 465 VAL B 327 REMARK 465 ALA B 328 REMARK 465 ARG B 329 REMARK 465 PRO B 330 REMARK 465 ALA B 331 REMARK 465 SER B 332 REMARK 465 LEU B 333 REMARK 465 ARG B 334 REMARK 465 PRO B 335 REMARK 465 ARG B 336 REMARK 465 TRP B 337 REMARK 465 HIS B 338 REMARK 465 LYS B 339 REMARK 465 PRO B 340 REMARK 465 SER B 341 REMARK 465 THR B 342 REMARK 465 VAL B 343 REMARK 465 LEU B 344 REMARK 465 LYS B 345 REMARK 465 VAL B 346 REMARK 465 LEU B 347 REMARK 465 ASN B 348 REMARK 465 PRO B 349 REMARK 465 ARG B 350 REMARK 465 THR B 351 REMARK 465 VAL B 352 REMARK 465 VAL B 353 REMARK 465 ILE B 354 REMARK 465 LEU B 355 REMARK 465 ASP B 356 REMARK 465 HIS B 357 REMARK 465 LEU B 358 REMARK 465 GLY B 359 REMARK 465 ASN B 360 REMARK 465 ASN B 361 REMARK 465 ARG B 362 REMARK 465 THR B 363 REMARK 465 VAL B 364 REMARK 465 SER B 365 REMARK 465 ILE B 366 REMARK 465 ASP B 367 REMARK 465 ASN B 368 REMARK 465 LEU B 369 REMARK 465 LYS B 370 REMARK 465 PRO B 371 REMARK 465 THR B 372 REMARK 465 SER B 373 REMARK 465 HIS B 374 REMARK 465 GLN B 375 REMARK 465 ASN B 376 REMARK 465 GLY B 377 REMARK 465 THR B 378 REMARK 465 THR B 379 REMARK 465 ASN B 380 REMARK 465 ASP B 381 REMARK 465 THR B 382 REMARK 465 ALA B 383 REMARK 465 THR B 384 REMARK 465 MET B 385 REMARK 465 ASP B 386 REMARK 465 HIS B 387 REMARK 465 LEU B 388 REMARK 465 GLU B 389 REMARK 465 LYS B 390 REMARK 465 ASN B 391 REMARK 465 GLU B 392 REMARK 465 DC T -13 REMARK 465 DC T -12 REMARK 465 DC T -11 REMARK 465 DG T -10 REMARK 465 DA T -9 REMARK 465 DG T -8 REMARK 465 DC T 11 REMARK 465 DT T 12 REMARK 465 DC T 13 REMARK 465 DG T 14 REMARK 465 DG T 15 REMARK 465 DG T 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 9 CG OD1 OD2 REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 LYS A 91 CG CD CE NZ REMARK 470 LYS A 339 CG CD CE NZ REMARK 470 ARG B 117 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 197 CG CD OE1 OE2 REMARK 470 HIS B 213 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 228 CE NZ REMARK 470 VAL B 236 CG1 CG2 REMARK 470 LYS B 241 CG CD CE NZ REMARK 470 LYS B 262 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT C 3 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT C 5 O4' - C1' - N1 ANGL. DEV. = -5.4 DEGREES REMARK 500 DT C 15 P - O5' - C5' ANGL. DEV. = -12.0 DEGREES REMARK 500 DC C 16 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC C 18 C1' - O4' - C4' ANGL. DEV. = -6.4 DEGREES REMARK 500 DA C 19 C3' - C2' - C1' ANGL. DEV. = -5.2 DEGREES REMARK 500 DT D 1 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DC D 3 P - O5' - C5' ANGL. DEV. = -10.6 DEGREES REMARK 500 DT D 8 N3 - C4 - O4 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT D 8 C5 - C4 - O4 ANGL. DEV. = -4.8 DEGREES REMARK 500 DT D 9 O4' - C1' - C2' ANGL. DEV. = -4.8 DEGREES REMARK 500 DC D 16 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DA D 17 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 DA D 17 O4' - C1' - N9 ANGL. DEV. = 9.8 DEGREES REMARK 500 DC T -6 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG T -1 O4' - C1' - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 DA T 2 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DC T 4 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 DA T 5 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG T 7 O4' - C1' - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 DT T 8 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 -73.46 -70.85 REMARK 500 ALA A 65 10.01 -141.56 REMARK 500 GLN A 137 28.14 48.89 REMARK 500 PRO A 161 59.21 -96.51 REMARK 500 GLN A 186 25.97 -78.06 REMARK 500 HIS A 213 80.66 -166.07 REMARK 500 ASP A 282 -31.75 -33.28 REMARK 500 THR A 283 43.15 -99.19 REMARK 500 SER A 301 50.94 -113.51 REMARK 500 LEU A 333 18.47 57.33 REMARK 500 PRO A 349 20.36 -71.74 REMARK 500 ASP A 356 -146.04 -70.44 REMARK 500 PHE B 122 14.37 57.93 REMARK 500 LYS B 124 127.43 -175.22 REMARK 500 PRO B 135 70.63 -48.01 REMARK 500 ILE B 176 -65.04 -105.76 REMARK 500 ASP B 185 -177.12 -68.83 REMARK 500 GLN B 186 34.99 -94.08 REMARK 500 SER B 216 -98.05 -129.09 REMARK 500 VAL B 236 -60.02 -103.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 62 NE2 REMARK 620 2 HIS A 66 ND1 95.9 REMARK 620 3 CYS A 96 SG 95.3 110.2 REMARK 620 4 CYS A 99 SG 104.1 109.4 133.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 128 OD2 REMARK 620 2 GLU A 221 OE1 80.9 REMARK 620 3 GLU A 221 OE2 83.4 52.0 REMARK 620 4 DA D 17 O3' 157.8 83.5 74.6 REMARK 620 5 DC T 0 OP1 114.9 126.1 77.8 63.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 128 OD1 REMARK 620 2 ASP A 185 OD1 92.9 REMARK 620 3 DG T -1 O3' 145.4 99.1 REMARK 620 4 DC T 0 OP1 86.5 86.7 62.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 128 OD1 REMARK 620 2 ASP B 185 OD1 64.6 REMARK 620 3 HOH B 501 O 145.6 149.8 REMARK 620 4 HOH B 502 O 75.4 63.8 114.2 REMARK 620 5 HOH B 504 O 103.2 106.1 72.9 169.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE T 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DLR RELATED DB: PDB REMARK 900 CATALYTIC CORE DOMAIN OF THE SAME PROTEIN REMARK 900 RELATED ID: 3OY9 RELATED DB: PDB REMARK 900 VIRAL DNA - INTEGRASE COMPLEX PRIOR TO BINDING TARGET DNA REMARK 900 RELATED ID: 3OYA RELATED DB: PDB REMARK 900 VIRAL DNA - INTEGRASE COMPLEX PRIOR TO BINDING TARGET DNA, REMARK 900 INHIBITED BY RALTEGRAVIR REMARK 900 RELATED ID: 3OS2 RELATED DB: PDB REMARK 900 SAME COMPLEX, BUT WITHOUT MN CATIONS IN THE ACTIVE SITE DBREF 4E7K A 1 392 UNP P14350 POL_FOAMV 752 1143 DBREF 4E7K B 1 392 UNP P14350 POL_FOAMV 752 1143 DBREF 4E7K D 1 17 PDB 4E7K 4E7K 1 17 DBREF 4E7K C 1 19 PDB 4E7K 4E7K 1 19 DBREF 4E7K T -13 16 PDB 4E7K 4E7K -13 16 SEQADV 4E7K GLY A -2 UNP P14350 EXPRESSION TAG SEQADV 4E7K PRO A -1 UNP P14350 EXPRESSION TAG SEQADV 4E7K GLY A 0 UNP P14350 EXPRESSION TAG SEQADV 4E7K SER A 217 UNP P14350 GLY 968 VARIANT SEQADV 4E7K GLY A 218 UNP P14350 SER 969 VARIANT SEQADV 4E7K GLY B -2 UNP P14350 EXPRESSION TAG SEQADV 4E7K PRO B -1 UNP P14350 EXPRESSION TAG SEQADV 4E7K GLY B 0 UNP P14350 EXPRESSION TAG SEQADV 4E7K SER B 217 UNP P14350 GLY 968 VARIANT SEQADV 4E7K GLY B 218 UNP P14350 SER 969 VARIANT SEQRES 1 A 395 GLY PRO GLY CYS ASN THR LYS LYS PRO ASN LEU ASP ALA SEQRES 2 A 395 GLU LEU ASP GLN LEU LEU GLN GLY HIS TYR ILE LYS GLY SEQRES 3 A 395 TYR PRO LYS GLN TYR THR TYR PHE LEU GLU ASP GLY LYS SEQRES 4 A 395 VAL LYS VAL SER ARG PRO GLU GLY VAL LYS ILE ILE PRO SEQRES 5 A 395 PRO GLN SER ASP ARG GLN LYS ILE VAL LEU GLN ALA HIS SEQRES 6 A 395 ASN LEU ALA HIS THR GLY ARG GLU ALA THR LEU LEU LYS SEQRES 7 A 395 ILE ALA ASN LEU TYR TRP TRP PRO ASN MET ARG LYS ASP SEQRES 8 A 395 VAL VAL LYS GLN LEU GLY ARG CYS GLN GLN CYS LEU ILE SEQRES 9 A 395 THR ASN ALA SER ASN LYS ALA SER GLY PRO ILE LEU ARG SEQRES 10 A 395 PRO ASP ARG PRO GLN LYS PRO PHE ASP LYS PHE PHE ILE SEQRES 11 A 395 ASP TYR ILE GLY PRO LEU PRO PRO SER GLN GLY TYR LEU SEQRES 12 A 395 TYR VAL LEU VAL VAL VAL ASP GLY MET THR GLY PHE THR SEQRES 13 A 395 TRP LEU TYR PRO THR LYS ALA PRO SER THR SER ALA THR SEQRES 14 A 395 VAL LYS SER LEU ASN VAL LEU THR SER ILE ALA ILE PRO SEQRES 15 A 395 LYS VAL ILE HIS SER ASP GLN GLY ALA ALA PHE THR SER SEQRES 16 A 395 SER THR PHE ALA GLU TRP ALA LYS GLU ARG GLY ILE HIS SEQRES 17 A 395 LEU GLU PHE SER THR PRO TYR HIS PRO GLN SER SER GLY SEQRES 18 A 395 LYS VAL GLU ARG LYS ASN SER ASP ILE LYS ARG LEU LEU SEQRES 19 A 395 THR LYS LEU LEU VAL GLY ARG PRO THR LYS TRP TYR ASP SEQRES 20 A 395 LEU LEU PRO VAL VAL GLN LEU ALA LEU ASN ASN THR TYR SEQRES 21 A 395 SER PRO VAL LEU LYS TYR THR PRO HIS GLN LEU LEU PHE SEQRES 22 A 395 GLY ILE ASP SER ASN THR PRO PHE ALA ASN GLN ASP THR SEQRES 23 A 395 LEU ASP LEU THR ARG GLU GLU GLU LEU SER LEU LEU GLN SEQRES 24 A 395 GLU ILE ARG THR SER LEU TYR HIS PRO SER THR PRO PRO SEQRES 25 A 395 ALA SER SER ARG SER TRP SER PRO VAL VAL GLY GLN LEU SEQRES 26 A 395 VAL GLN GLU ARG VAL ALA ARG PRO ALA SER LEU ARG PRO SEQRES 27 A 395 ARG TRP HIS LYS PRO SER THR VAL LEU LYS VAL LEU ASN SEQRES 28 A 395 PRO ARG THR VAL VAL ILE LEU ASP HIS LEU GLY ASN ASN SEQRES 29 A 395 ARG THR VAL SER ILE ASP ASN LEU LYS PRO THR SER HIS SEQRES 30 A 395 GLN ASN GLY THR THR ASN ASP THR ALA THR MET ASP HIS SEQRES 31 A 395 LEU GLU LYS ASN GLU SEQRES 1 B 395 GLY PRO GLY CYS ASN THR LYS LYS PRO ASN LEU ASP ALA SEQRES 2 B 395 GLU LEU ASP GLN LEU LEU GLN GLY HIS TYR ILE LYS GLY SEQRES 3 B 395 TYR PRO LYS GLN TYR THR TYR PHE LEU GLU ASP GLY LYS SEQRES 4 B 395 VAL LYS VAL SER ARG PRO GLU GLY VAL LYS ILE ILE PRO SEQRES 5 B 395 PRO GLN SER ASP ARG GLN LYS ILE VAL LEU GLN ALA HIS SEQRES 6 B 395 ASN LEU ALA HIS THR GLY ARG GLU ALA THR LEU LEU LYS SEQRES 7 B 395 ILE ALA ASN LEU TYR TRP TRP PRO ASN MET ARG LYS ASP SEQRES 8 B 395 VAL VAL LYS GLN LEU GLY ARG CYS GLN GLN CYS LEU ILE SEQRES 9 B 395 THR ASN ALA SER ASN LYS ALA SER GLY PRO ILE LEU ARG SEQRES 10 B 395 PRO ASP ARG PRO GLN LYS PRO PHE ASP LYS PHE PHE ILE SEQRES 11 B 395 ASP TYR ILE GLY PRO LEU PRO PRO SER GLN GLY TYR LEU SEQRES 12 B 395 TYR VAL LEU VAL VAL VAL ASP GLY MET THR GLY PHE THR SEQRES 13 B 395 TRP LEU TYR PRO THR LYS ALA PRO SER THR SER ALA THR SEQRES 14 B 395 VAL LYS SER LEU ASN VAL LEU THR SER ILE ALA ILE PRO SEQRES 15 B 395 LYS VAL ILE HIS SER ASP GLN GLY ALA ALA PHE THR SER SEQRES 16 B 395 SER THR PHE ALA GLU TRP ALA LYS GLU ARG GLY ILE HIS SEQRES 17 B 395 LEU GLU PHE SER THR PRO TYR HIS PRO GLN SER SER GLY SEQRES 18 B 395 LYS VAL GLU ARG LYS ASN SER ASP ILE LYS ARG LEU LEU SEQRES 19 B 395 THR LYS LEU LEU VAL GLY ARG PRO THR LYS TRP TYR ASP SEQRES 20 B 395 LEU LEU PRO VAL VAL GLN LEU ALA LEU ASN ASN THR TYR SEQRES 21 B 395 SER PRO VAL LEU LYS TYR THR PRO HIS GLN LEU LEU PHE SEQRES 22 B 395 GLY ILE ASP SER ASN THR PRO PHE ALA ASN GLN ASP THR SEQRES 23 B 395 LEU ASP LEU THR ARG GLU GLU GLU LEU SER LEU LEU GLN SEQRES 24 B 395 GLU ILE ARG THR SER LEU TYR HIS PRO SER THR PRO PRO SEQRES 25 B 395 ALA SER SER ARG SER TRP SER PRO VAL VAL GLY GLN LEU SEQRES 26 B 395 VAL GLN GLU ARG VAL ALA ARG PRO ALA SER LEU ARG PRO SEQRES 27 B 395 ARG TRP HIS LYS PRO SER THR VAL LEU LYS VAL LEU ASN SEQRES 28 B 395 PRO ARG THR VAL VAL ILE LEU ASP HIS LEU GLY ASN ASN SEQRES 29 B 395 ARG THR VAL SER ILE ASP ASN LEU LYS PRO THR SER HIS SEQRES 30 B 395 GLN ASN GLY THR THR ASN ASP THR ALA THR MET ASP HIS SEQRES 31 B 395 LEU GLU LYS ASN GLU SEQRES 1 C 19 DA DT DT DG DT DC DA DT DG DG DA DA DT SEQRES 2 C 19 DT DT DC DG DC DA SEQRES 1 D 17 DT DG DC DG DA DA DA DT DT DC DC DA DT SEQRES 2 D 17 DG DA DC DA SEQRES 1 T 30 DC DC DC DG DA DG DG DC DA DC DG DT DG SEQRES 2 T 30 DC DT DA DG DC DA DC DG DT DG DC DC DT SEQRES 3 T 30 DC DG DG DG HET ZN A 401 1 HET MN A 402 1 HET MN A 403 1 HET MN B 401 1 HET SO4 B 402 5 HET PGE T 101 10 HETNAM ZN ZINC ION HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION HETNAM PGE TRIETHYLENE GLYCOL FORMUL 6 ZN ZN 2+ FORMUL 7 MN 3(MN 2+) FORMUL 10 SO4 O4 S 2- FORMUL 11 PGE C6 H14 O4 FORMUL 12 HOH *12(H2 O) HELIX 1 1 GLU A 11 GLN A 17 1 7 HELIX 2 2 PRO A 50 ASN A 63 1 14 HELIX 3 3 GLY A 68 ASN A 78 1 11 HELIX 4 4 ASN A 84 GLY A 94 1 11 HELIX 5 5 CYS A 96 ASN A 103 1 8 HELIX 6 6 SER A 162 SER A 175 1 14 HELIX 7 7 GLY A 187 SER A 192 1 6 HELIX 8 8 SER A 192 GLY A 203 1 12 HELIX 9 9 HIS A 213 SER A 216 5 4 HELIX 10 10 SER A 217 LEU A 235 1 19 HELIX 11 11 TRP A 242 ASP A 244 5 3 HELIX 12 12 LEU A 245 ASN A 255 1 11 HELIX 13 13 THR A 264 GLY A 271 1 8 HELIX 14 14 THR A 287 SER A 301 1 15 HELIX 15 15 SER B 162 THR B 174 1 13 HELIX 16 16 GLY B 187 SER B 192 1 6 HELIX 17 17 SER B 192 ARG B 202 1 11 HELIX 18 18 SER B 217 ARG B 238 1 22 HELIX 19 19 TRP B 242 ASP B 244 5 3 HELIX 20 20 LEU B 245 THR B 256 1 12 HELIX 21 21 THR B 264 GLY B 271 1 8 SHEET 1 A 3 TYR A 30 GLU A 33 0 SHEET 2 A 3 LYS A 36 ARG A 41 -1 O LYS A 36 N GLU A 33 SHEET 3 A 3 GLY A 44 ILE A 47 -1 O LYS A 46 N VAL A 39 SHEET 1 B 2 ALA A 108 SER A 109 0 SHEET 2 B 2 SER A 314 TRP A 315 1 O TRP A 315 N ALA A 108 SHEET 1 C 5 THR A 153 THR A 158 0 SHEET 2 C 5 TYR A 141 ASP A 147 -1 N TYR A 141 O THR A 158 SHEET 3 C 5 LYS A 124 ILE A 130 -1 N PHE A 126 O VAL A 146 SHEET 4 C 5 VAL A 181 SER A 184 1 O HIS A 183 N PHE A 125 SHEET 5 C 5 HIS A 205 PHE A 208 1 O GLU A 207 N ILE A 182 SHEET 1 D 5 ASN A 361 SER A 365 0 SHEET 2 D 5 THR A 351 LEU A 355 -1 N VAL A 352 O VAL A 364 SHEET 3 D 5 SER A 341 ASN A 348 -1 N LYS A 345 O VAL A 353 SHEET 4 D 5 LEU A 322 GLU A 325 -1 N VAL A 323 O SER A 341 SHEET 5 D 5 LEU A 369 PRO A 371 -1 O LYS A 370 N GLN A 324 SHEET 1 E 5 THR B 153 THR B 158 0 SHEET 2 E 5 TYR B 141 ASP B 147 -1 N LEU B 143 O TYR B 156 SHEET 3 E 5 PHE B 125 ILE B 130 -1 N ASP B 128 O VAL B 144 SHEET 4 E 5 VAL B 181 SER B 184 1 O VAL B 181 N PHE B 125 SHEET 5 E 5 HIS B 205 PHE B 208 1 O HIS B 205 N ILE B 182 LINK NE2 HIS A 62 ZN ZN A 401 1555 1555 2.04 LINK ND1 HIS A 66 ZN ZN A 401 1555 1555 2.06 LINK SG CYS A 96 ZN ZN A 401 1555 1555 2.58 LINK SG CYS A 99 ZN ZN A 401 1555 1555 2.24 LINK OD2 ASP A 128 MN MN A 402 1555 1555 2.32 LINK OD1 ASP A 128 MN MN A 403 1555 1555 2.37 LINK OD1 ASP A 185 MN MN A 403 1555 1555 2.67 LINK OE1 GLU A 221 MN MN A 402 1555 1555 2.47 LINK OE2 GLU A 221 MN MN A 402 1555 1555 2.52 LINK MN MN A 402 O3' DA D 17 1555 1555 2.56 LINK MN MN A 402 OP1 DC T 0 1555 1555 2.36 LINK MN MN A 403 O3' DG T -1 1555 1555 2.46 LINK MN MN A 403 OP1 DC T 0 1555 1555 2.38 LINK OD1 ASP B 128 MN MN B 401 1555 1555 2.61 LINK OD1 ASP B 185 MN MN B 401 1555 1555 2.37 LINK MN MN B 401 O HOH B 501 1555 1555 2.66 LINK MN MN B 401 O HOH B 502 1555 1555 2.56 LINK MN MN B 401 O HOH B 504 1555 1555 2.57 CISPEP 1 GLY A 131 PRO A 132 0 10.28 CISPEP 2 LEU A 358 GLY A 359 0 -3.33 CISPEP 3 GLY B 131 PRO B 132 0 9.23 SITE 1 AC1 4 HIS A 62 HIS A 66 CYS A 96 CYS A 99 SITE 1 AC2 5 ASP A 128 TYR A 129 GLU A 221 DA D 17 SITE 2 AC2 5 DC T 0 SITE 1 AC3 4 ASP A 128 ASP A 185 DG T -1 DC T 0 SITE 1 AC4 6 ASP B 128 ASP B 185 HOH B 501 HOH B 502 SITE 2 AC4 6 HOH B 504 DA C 19 SITE 1 AC5 5 LYS B 219 ARG B 222 SER B 258 PRO B 259 SITE 2 AC5 5 VAL B 260 SITE 1 AC6 1 DA T 2 CRYST1 163.914 163.914 129.675 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006101 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006101 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007712 0.00000