HEADER TRANSFERASE 20-MAR-12 4E8F TITLE STRUCTURAL BASIS FOR THE ACTIVITY OF A CYTOPLASMIC RNA TERMINAL U- TITLE 2 TRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(A) RNA POLYMERASE PROTEIN CID1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CAFFEINE-INDUCED DEATH PROTEIN 1; COMPND 5 EC: 2.7.7.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE 972H-; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 284812; SOURCE 5 STRAIN: 972 / ATCC 24843; SOURCE 6 GENE: CID1, SPAC19D5.03; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS BETA POLYMERASE-LIKE NUCLEOTIDYL TRANSFERASE, TERMINAL URIDINE KEYWDS 2 TRANSFERASE, UTP, RNA, CYTOPLASMIC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.A.YATES,S.FLEURDEPINE,O.S.RISSLAND,L.DECOLIBUS,K.HARLOS, AUTHOR 2 C.J.NORBURY,R.J.C.GILBERT REVDAT 5 28-FEB-24 4E8F 1 REMARK REVDAT 4 15-NOV-17 4E8F 1 REMARK REVDAT 3 22-AUG-12 4E8F 1 JRNL REVDAT 2 18-JUL-12 4E8F 1 JRNL REVDAT 1 04-JUL-12 4E8F 0 JRNL AUTH L.A.YATES,S.FLEURDEPINE,O.S.RISSLAND,L.DE COLIBUS,K.HARLOS, JRNL AUTH 2 C.J.NORBURY,R.J.GILBERT JRNL TITL STRUCTURAL BASIS FOR THE ACTIVITY OF A CYTOPLASMIC RNA JRNL TITL 2 TERMINAL URIDYLYL TRANSFERASE. JRNL REF NAT.STRUCT.MOL.BIOL. V. 19 782 2012 JRNL REFN ISSN 1545-9993 JRNL PMID 22751018 JRNL DOI 10.1038/NSMB.2329 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 29283 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1489 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 15 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.69 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.45 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2855 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2098 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2684 REMARK 3 BIN R VALUE (WORKING SET) : 0.2073 REMARK 3 BIN FREE R VALUE : 0.2494 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.99 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 171 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5202 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 81 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.82650 REMARK 3 B22 (A**2) : 8.14210 REMARK 3 B33 (A**2) : -16.96850 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.398 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5337 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7201 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2461 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 114 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 767 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5337 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 678 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5884 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.95 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.21 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|38 - A|110 A|114 - A|308 A|322 - A|380 A|500 - REMARK 3 A|500 } REMARK 3 ORIGIN FOR THE GROUP (A): 13.1722 11.3345 32.4105 REMARK 3 T TENSOR REMARK 3 T11: -0.1454 T22: -0.1775 REMARK 3 T33: -0.0504 T12: 0.0204 REMARK 3 T13: 0.0120 T23: -0.0657 REMARK 3 L TENSOR REMARK 3 L11: 2.3889 L22: 2.3811 REMARK 3 L33: 1.3933 L12: 0.5006 REMARK 3 L13: 0.0942 L23: 0.7007 REMARK 3 S TENSOR REMARK 3 S11: 0.0104 S12: 0.2902 S13: 0.0383 REMARK 3 S21: -0.0969 S22: -0.1574 S23: 0.3187 REMARK 3 S31: 0.1049 S32: -0.0814 S33: 0.1470 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|38 - B|57 B|65 - B|88 B|90 - B|96 B|98 - B|111 REMARK 3 B|500 - B|501 } REMARK 3 ORIGIN FOR THE GROUP (A): 50.4658 6.6392 42.5578 REMARK 3 T TENSOR REMARK 3 T11: -0.1704 T22: -0.2031 REMARK 3 T33: -0.0942 T12: 0.0842 REMARK 3 T13: -0.1097 T23: -0.1469 REMARK 3 L TENSOR REMARK 3 L11: 4.4070 L22: 1.8188 REMARK 3 L33: 1.4902 L12: -0.6202 REMARK 3 L13: -0.8819 L23: 0.7146 REMARK 3 S TENSOR REMARK 3 S11: -0.0395 S12: -0.1939 S13: 0.1464 REMARK 3 S21: 0.0403 S22: 0.2527 S23: -0.1419 REMARK 3 S31: 0.2736 S32: 0.2188 S33: -0.2132 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4E8F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071299. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9173 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29430 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 56.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 6.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% (V/V) GLYCEROL, 25.5% (W/V) REMARK 280 PEG4000, 170MM AMMONIUM ACETATE, 85MM TRI-SODIUM CITRATE, PH 5.6 REMARK 280 WITH 1% TAURINE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.57500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.78500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.60500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.78500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.57500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.60500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ILE A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 ALA A 6 REMARK 465 GLN A 7 REMARK 465 PHE A 8 REMARK 465 ILE A 9 REMARK 465 PRO A 10 REMARK 465 GLY A 11 REMARK 465 VAL A 12 REMARK 465 HIS A 13 REMARK 465 THR A 14 REMARK 465 VAL A 15 REMARK 465 GLU A 16 REMARK 465 GLU A 17 REMARK 465 ILE A 18 REMARK 465 GLU A 19 REMARK 465 ALA A 20 REMARK 465 GLU A 21 REMARK 465 ILE A 22 REMARK 465 HIS A 23 REMARK 465 LYS A 24 REMARK 465 ASN A 25 REMARK 465 LEU A 26 REMARK 465 HIS A 27 REMARK 465 ILE A 28 REMARK 465 SER A 29 REMARK 465 LYS A 30 REMARK 465 SER A 31 REMARK 465 CYS A 32 REMARK 465 SER A 33 REMARK 465 TYR A 34 REMARK 465 GLN A 35 REMARK 465 LYS A 36 REMARK 465 VAL A 37 REMARK 465 ARG A 111 REMARK 465 VAL A 112 REMARK 465 GLN A 113 REMARK 465 ALA A 309 REMARK 465 THR A 310 REMARK 465 GLU A 311 REMARK 465 HIS A 312 REMARK 465 THR A 313 REMARK 465 GLY A 314 REMARK 465 SER A 315 REMARK 465 ALA A 316 REMARK 465 ASP A 317 REMARK 465 GLN A 318 REMARK 465 ILE A 319 REMARK 465 ILE A 320 REMARK 465 LYS A 321 REMARK 465 PRO A 381 REMARK 465 ARG A 382 REMARK 465 ARG A 383 REMARK 465 GLN A 384 REMARK 465 LYS A 385 REMARK 465 LYS A 386 REMARK 465 THR A 387 REMARK 465 ASP A 388 REMARK 465 GLU A 389 REMARK 465 GLN A 390 REMARK 465 SER A 391 REMARK 465 ASN A 392 REMARK 465 LYS A 393 REMARK 465 LYS A 394 REMARK 465 LEU A 395 REMARK 465 LEU A 396 REMARK 465 ASN A 397 REMARK 465 GLU A 398 REMARK 465 THR A 399 REMARK 465 ASP A 400 REMARK 465 GLY A 401 REMARK 465 ASP A 402 REMARK 465 ASN A 403 REMARK 465 SER A 404 REMARK 465 GLU A 405 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ILE B 3 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 ALA B 6 REMARK 465 GLN B 7 REMARK 465 PHE B 8 REMARK 465 ILE B 9 REMARK 465 PRO B 10 REMARK 465 GLY B 11 REMARK 465 VAL B 12 REMARK 465 HIS B 13 REMARK 465 THR B 14 REMARK 465 VAL B 15 REMARK 465 GLU B 16 REMARK 465 GLU B 17 REMARK 465 ILE B 18 REMARK 465 GLU B 19 REMARK 465 ALA B 20 REMARK 465 GLU B 21 REMARK 465 ILE B 22 REMARK 465 HIS B 23 REMARK 465 LYS B 24 REMARK 465 ASN B 25 REMARK 465 LEU B 26 REMARK 465 HIS B 27 REMARK 465 ILE B 28 REMARK 465 SER B 29 REMARK 465 LYS B 30 REMARK 465 SER B 31 REMARK 465 CYS B 32 REMARK 465 SER B 33 REMARK 465 TYR B 34 REMARK 465 GLN B 35 REMARK 465 LYS B 36 REMARK 465 VAL B 37 REMARK 465 SER B 58 REMARK 465 ASP B 59 REMARK 465 LYS B 60 REMARK 465 GLU B 61 REMARK 465 PHE B 62 REMARK 465 LYS B 63 REMARK 465 GLU B 64 REMARK 465 GLY B 89 REMARK 465 VAL B 112 REMARK 465 GLN B 113 REMARK 465 SER B 114 REMARK 465 ALA B 309 REMARK 465 THR B 310 REMARK 465 GLU B 311 REMARK 465 HIS B 312 REMARK 465 THR B 313 REMARK 465 GLY B 314 REMARK 465 SER B 315 REMARK 465 ALA B 316 REMARK 465 ASP B 317 REMARK 465 GLN B 318 REMARK 465 ILE B 319 REMARK 465 ILE B 320 REMARK 465 LYS B 321 REMARK 465 PRO B 381 REMARK 465 ARG B 382 REMARK 465 ARG B 383 REMARK 465 GLN B 384 REMARK 465 LYS B 385 REMARK 465 LYS B 386 REMARK 465 THR B 387 REMARK 465 ASP B 388 REMARK 465 GLU B 389 REMARK 465 GLN B 390 REMARK 465 SER B 391 REMARK 465 ASN B 392 REMARK 465 LYS B 393 REMARK 465 LYS B 394 REMARK 465 LEU B 395 REMARK 465 LEU B 396 REMARK 465 ASN B 397 REMARK 465 GLU B 398 REMARK 465 THR B 399 REMARK 465 ASP B 400 REMARK 465 GLY B 401 REMARK 465 ASP B 402 REMARK 465 ASN B 403 REMARK 465 SER B 404 REMARK 465 GLU B 405 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 114 OG REMARK 470 TYR A 366 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 65 CG CD CE NZ REMARK 470 ARG B 66 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 69 CG CD1 CD2 REMARK 470 ARG B 111 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 322 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 41 63.80 34.72 REMARK 500 ASP A 115 -45.94 -26.90 REMARK 500 THR A 116 -30.66 -152.75 REMARK 500 THR A 149 -77.69 -84.96 REMARK 500 THR A 208 -160.08 -119.38 REMARK 500 TRP A 306 63.24 -100.19 REMARK 500 ARG B 66 -38.10 -141.77 REMARK 500 ALA B 67 -157.71 58.49 REMARK 500 ALA B 68 -10.59 -150.53 REMARK 500 SER B 93 38.74 -72.01 REMARK 500 ASP B 109 -70.65 -56.08 REMARK 500 SER B 110 -65.89 -135.16 REMARK 500 ALA B 138 -124.36 63.57 REMARK 500 THR B 149 -79.52 -55.93 REMARK 500 ASN B 151 -2.66 -140.01 REMARK 500 THR B 208 -159.77 -120.34 REMARK 500 GLU B 287 -0.02 -142.29 REMARK 500 TRP B 306 48.62 -100.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4E7X RELATED DB: PDB REMARK 900 APO STRUCTURE, FORM I REMARK 900 RELATED ID: 4E80 RELATED DB: PDB REMARK 900 UTP-BOUND STRUCTURE DBREF 4E8F A 1 405 UNP O13833 CID1_SCHPO 1 405 DBREF 4E8F B 1 405 UNP O13833 CID1_SCHPO 1 405 SEQRES 1 A 405 MET ASN ILE SER SER ALA GLN PHE ILE PRO GLY VAL HIS SEQRES 2 A 405 THR VAL GLU GLU ILE GLU ALA GLU ILE HIS LYS ASN LEU SEQRES 3 A 405 HIS ILE SER LYS SER CYS SER TYR GLN LYS VAL PRO ASN SEQRES 4 A 405 SER HIS LYS GLU PHE THR LYS PHE CYS TYR GLU VAL TYR SEQRES 5 A 405 ASN GLU ILE LYS ILE SER ASP LYS GLU PHE LYS GLU LYS SEQRES 6 A 405 ARG ALA ALA LEU ASP THR LEU ARG LEU CYS LEU LYS ARG SEQRES 7 A 405 ILE SER PRO ASP ALA GLU LEU VAL ALA PHE GLY SER LEU SEQRES 8 A 405 GLU SER GLY LEU ALA LEU LYS ASN SER ASP MET ASP LEU SEQRES 9 A 405 CYS VAL LEU MET ASP SER ARG VAL GLN SER ASP THR ILE SEQRES 10 A 405 ALA LEU GLN PHE TYR GLU GLU LEU ILE ALA GLU GLY PHE SEQRES 11 A 405 GLU GLY LYS PHE LEU GLN ARG ALA ARG ILE PRO ILE ILE SEQRES 12 A 405 LYS LEU THR SER ASP THR LYS ASN GLY PHE GLY ALA SER SEQRES 13 A 405 PHE GLN CYS ASP ILE GLY PHE ASN ASN ARG LEU ALA ILE SEQRES 14 A 405 HIS ASN THR LEU LEU LEU SER SER TYR THR LYS LEU ASP SEQRES 15 A 405 ALA ARG LEU LYS PRO MET VAL LEU LEU VAL LYS HIS TRP SEQRES 16 A 405 ALA LYS ARG LYS GLN ILE ASN SER PRO TYR PHE GLY THR SEQRES 17 A 405 LEU SER SER TYR GLY TYR VAL LEU MET VAL LEU TYR TYR SEQRES 18 A 405 LEU ILE HIS VAL ILE LYS PRO PRO VAL PHE PRO ASN LEU SEQRES 19 A 405 LEU LEU SER PRO LEU LYS GLN GLU LYS ILE VAL ASP GLY SEQRES 20 A 405 PHE ASP VAL GLY PHE ASP ASP LYS LEU GLU ASP ILE PRO SEQRES 21 A 405 PRO SER GLN ASN TYR SER SER LEU GLY SER LEU LEU HIS SEQRES 22 A 405 GLY PHE PHE ARG PHE TYR ALA TYR LYS PHE GLU PRO ARG SEQRES 23 A 405 GLU LYS VAL VAL THR PHE ARG ARG PRO ASP GLY TYR LEU SEQRES 24 A 405 THR LYS GLN GLU LYS GLY TRP THR SER ALA THR GLU HIS SEQRES 25 A 405 THR GLY SER ALA ASP GLN ILE ILE LYS ASP ARG TYR ILE SEQRES 26 A 405 LEU ALA ILE GLU ASP PRO PHE GLU ILE SER HIS ASN VAL SEQRES 27 A 405 GLY ARG THR VAL SER SER SER GLY LEU TYR ARG ILE ARG SEQRES 28 A 405 GLY GLU PHE MET ALA ALA SER ARG LEU LEU ASN SER ARG SEQRES 29 A 405 SER TYR PRO ILE PRO TYR ASP SER LEU PHE GLU GLU ALA SEQRES 30 A 405 PRO ILE PRO PRO ARG ARG GLN LYS LYS THR ASP GLU GLN SEQRES 31 A 405 SER ASN LYS LYS LEU LEU ASN GLU THR ASP GLY ASP ASN SEQRES 32 A 405 SER GLU SEQRES 1 B 405 MET ASN ILE SER SER ALA GLN PHE ILE PRO GLY VAL HIS SEQRES 2 B 405 THR VAL GLU GLU ILE GLU ALA GLU ILE HIS LYS ASN LEU SEQRES 3 B 405 HIS ILE SER LYS SER CYS SER TYR GLN LYS VAL PRO ASN SEQRES 4 B 405 SER HIS LYS GLU PHE THR LYS PHE CYS TYR GLU VAL TYR SEQRES 5 B 405 ASN GLU ILE LYS ILE SER ASP LYS GLU PHE LYS GLU LYS SEQRES 6 B 405 ARG ALA ALA LEU ASP THR LEU ARG LEU CYS LEU LYS ARG SEQRES 7 B 405 ILE SER PRO ASP ALA GLU LEU VAL ALA PHE GLY SER LEU SEQRES 8 B 405 GLU SER GLY LEU ALA LEU LYS ASN SER ASP MET ASP LEU SEQRES 9 B 405 CYS VAL LEU MET ASP SER ARG VAL GLN SER ASP THR ILE SEQRES 10 B 405 ALA LEU GLN PHE TYR GLU GLU LEU ILE ALA GLU GLY PHE SEQRES 11 B 405 GLU GLY LYS PHE LEU GLN ARG ALA ARG ILE PRO ILE ILE SEQRES 12 B 405 LYS LEU THR SER ASP THR LYS ASN GLY PHE GLY ALA SER SEQRES 13 B 405 PHE GLN CYS ASP ILE GLY PHE ASN ASN ARG LEU ALA ILE SEQRES 14 B 405 HIS ASN THR LEU LEU LEU SER SER TYR THR LYS LEU ASP SEQRES 15 B 405 ALA ARG LEU LYS PRO MET VAL LEU LEU VAL LYS HIS TRP SEQRES 16 B 405 ALA LYS ARG LYS GLN ILE ASN SER PRO TYR PHE GLY THR SEQRES 17 B 405 LEU SER SER TYR GLY TYR VAL LEU MET VAL LEU TYR TYR SEQRES 18 B 405 LEU ILE HIS VAL ILE LYS PRO PRO VAL PHE PRO ASN LEU SEQRES 19 B 405 LEU LEU SER PRO LEU LYS GLN GLU LYS ILE VAL ASP GLY SEQRES 20 B 405 PHE ASP VAL GLY PHE ASP ASP LYS LEU GLU ASP ILE PRO SEQRES 21 B 405 PRO SER GLN ASN TYR SER SER LEU GLY SER LEU LEU HIS SEQRES 22 B 405 GLY PHE PHE ARG PHE TYR ALA TYR LYS PHE GLU PRO ARG SEQRES 23 B 405 GLU LYS VAL VAL THR PHE ARG ARG PRO ASP GLY TYR LEU SEQRES 24 B 405 THR LYS GLN GLU LYS GLY TRP THR SER ALA THR GLU HIS SEQRES 25 B 405 THR GLY SER ALA ASP GLN ILE ILE LYS ASP ARG TYR ILE SEQRES 26 B 405 LEU ALA ILE GLU ASP PRO PHE GLU ILE SER HIS ASN VAL SEQRES 27 B 405 GLY ARG THR VAL SER SER SER GLY LEU TYR ARG ILE ARG SEQRES 28 B 405 GLY GLU PHE MET ALA ALA SER ARG LEU LEU ASN SER ARG SEQRES 29 B 405 SER TYR PRO ILE PRO TYR ASP SER LEU PHE GLU GLU ALA SEQRES 30 B 405 PRO ILE PRO PRO ARG ARG GLN LYS LYS THR ASP GLU GLN SEQRES 31 B 405 SER ASN LYS LYS LEU LEU ASN GLU THR ASP GLY ASP ASN SEQRES 32 B 405 SER GLU HET ACT A 500 4 HET GOL B 500 6 HET ACT B 501 4 HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ACT 2(C2 H3 O2 1-) FORMUL 4 GOL C3 H8 O3 FORMUL 6 HOH *81(H2 O) HELIX 1 1 HIS A 41 LYS A 56 1 16 HELIX 2 2 SER A 58 SER A 80 1 23 HELIX 3 3 GLY A 89 GLY A 94 1 6 HELIX 4 4 THR A 116 GLU A 128 1 13 HELIX 5 5 ASN A 165 ASP A 182 1 18 HELIX 6 6 ARG A 184 LYS A 199 1 16 HELIX 7 7 SER A 210 VAL A 225 1 16 HELIX 8 8 LYS A 255 ILE A 259 5 5 HELIX 9 9 SER A 267 LYS A 282 1 16 HELIX 10 10 THR A 300 GLY A 305 1 6 HELIX 11 11 SER A 343 ASN A 362 1 20 HELIX 12 12 PRO A 369 GLU A 375 5 7 HELIX 13 13 HIS B 41 LYS B 56 1 16 HELIX 14 14 THR B 71 SER B 80 1 10 HELIX 15 15 THR B 116 GLU B 128 1 13 HELIX 16 16 ARG B 166 ASP B 182 1 17 HELIX 17 17 ARG B 184 LYS B 199 1 16 HELIX 18 18 SER B 210 VAL B 225 1 16 HELIX 19 19 LYS B 255 ILE B 259 5 5 HELIX 20 20 SER B 267 LYS B 282 1 16 HELIX 21 21 THR B 300 GLY B 305 1 6 HELIX 22 22 SER B 343 SER B 363 1 21 HELIX 23 23 PRO B 369 PHE B 374 5 6 SHEET 1 A 5 GLU A 84 PHE A 88 0 SHEET 2 A 5 MET A 102 LEU A 107 -1 O LEU A 107 N GLU A 84 SHEET 3 A 5 CYS A 159 PHE A 163 1 O ASP A 160 N LEU A 104 SHEET 4 A 5 ILE A 140 ASP A 148 -1 N LEU A 145 O CYS A 159 SHEET 5 A 5 PHE A 130 ARG A 137 -1 N LEU A 135 O ILE A 142 SHEET 1 B 2 ILE A 244 VAL A 245 0 SHEET 2 B 2 PHE A 248 ASP A 249 -1 O PHE A 248 N VAL A 245 SHEET 1 C 2 VAL A 289 VAL A 290 0 SHEET 2 C 2 ALA A 327 ILE A 328 1 O ALA A 327 N VAL A 290 SHEET 1 D 5 GLU B 84 ALA B 87 0 SHEET 2 D 5 LEU B 104 MET B 108 -1 O LEU B 107 N GLU B 84 SHEET 3 D 5 CYS B 159 ASN B 165 1 O ASN B 164 N VAL B 106 SHEET 4 D 5 ILE B 140 ASP B 148 -1 N LEU B 145 O CYS B 159 SHEET 5 D 5 PHE B 130 ARG B 137 -1 N GLU B 131 O SER B 147 SHEET 1 E 2 ILE B 244 VAL B 245 0 SHEET 2 E 2 PHE B 248 ASP B 249 -1 O PHE B 248 N VAL B 245 SHEET 1 F 2 VAL B 289 VAL B 290 0 SHEET 2 F 2 ALA B 327 ILE B 328 1 O ALA B 327 N VAL B 290 CISPEP 1 LYS A 227 PRO A 228 0 -2.64 CISPEP 2 TYR A 366 PRO A 367 0 4.60 CISPEP 3 ASN B 39 SER B 40 0 1.96 CISPEP 4 LEU B 91 GLU B 92 0 -6.70 CISPEP 5 LYS B 227 PRO B 228 0 -2.69 CISPEP 6 TYR B 366 PRO B 367 0 2.03 SITE 1 AC1 2 ALA A 168 ASN A 171 SITE 1 AC2 2 ILE B 57 HOH B 630 SITE 1 AC3 5 ASP A 258 PRO A 261 SER B 90 LEU B 91 SITE 2 AC3 5 SER B 176 CRYST1 81.150 101.210 113.570 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012323 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009880 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008805 0.00000