HEADER TRANSFERASE 22-MAR-12 4EAG TITLE CO-CRYSTAL STRUCTURE OF AN CHIMERIC AMPK CORE WITH ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: EG:132E8.2 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 458-582; COMPND 5 SYNONYM: FI03728P, SNF1A/AMP-ACTIVATED PROTEIN KINASE, SNF1A/AMP- COMPND 6 ACTIVATED PROTEIN KINASE, ISOFORM A, SNF1A/AMP-ACTIVATED PROTEIN COMPND 7 KINASE, ISOFORM B, SNF1A/AMP-ACTIVATED PROTEIN KINASE, ISOFORM C; COMPND 8 EC: 2.7.11.-, 2.7.11.16; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-1; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: UNP RESIDUES 187-270; COMPND 14 SYNONYM: AMPK SUBUNIT BETA-1, AMPKB, 5'-AMP-ACTIVATED PROTEIN KINASE COMPND 15 40 KDA SUBUNIT; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1; COMPND 19 CHAIN: C; COMPND 20 SYNONYM: AMPK GAMMA1, AMPK SUBUNIT GAMMA-1, AMPKG; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: SNF1A, EG:132E8.2, SNF1A-RA, CG3051, DMEL_CG3051; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 11 ORGANISM_COMMON: RAT; SOURCE 12 ORGANISM_TAXID: 10116; SOURCE 13 GENE: PRKAB1; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 19 ORGANISM_COMMON: RAT; SOURCE 20 ORGANISM_TAXID: 10116; SOURCE 21 GENE: PRKAG1; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 24 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS AMPK, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.CHEN,J.WANG,Y.-Y.ZHANG,S.F.YAN,D.NEUMANN,U.SCHLATTNER,Z.-X.WANG,J.- AUTHOR 2 W.WU REVDAT 3 08-NOV-23 4EAG 1 REMARK SEQADV REVDAT 2 12-MAR-14 4EAG 1 JRNL REVDAT 1 06-JUN-12 4EAG 0 JRNL AUTH L.CHEN,J.WANG,Y.-Y.ZHANG,S.F.YAN,D.NEUMANN,U.SCHLATTNER, JRNL AUTH 2 Z.-X.WANG,J.-W.WU JRNL TITL AMP-ACTIVATED PROTEIN KINASE UNDERGOES NUCLEOTIDE-DEPENDENT JRNL TITL 2 CONFORMATIONAL CHANGES JRNL REF NAT.STRUCT.MOL.BIOL. V. 19 716 2012 JRNL REFN ISSN 1545-9993 JRNL PMID 22659875 JRNL DOI 10.1038/NSMB.2319 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.5_2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 77.6 REMARK 3 NUMBER OF REFLECTIONS : 19448 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8625 - 5.1590 0.99 3493 191 0.2223 0.2555 REMARK 3 2 5.1590 - 4.0982 1.00 3409 193 0.1633 0.1865 REMARK 3 3 4.0982 - 3.5812 1.00 3385 171 0.1957 0.2516 REMARK 3 4 3.5812 - 3.2542 0.93 3155 170 0.2327 0.3090 REMARK 3 5 3.2542 - 3.0212 0.72 2410 123 0.2491 0.3005 REMARK 3 6 3.0212 - 2.8432 0.51 1724 86 0.2374 0.2691 REMARK 3 7 2.8432 - 2.7009 0.27 890 48 0.2148 0.2990 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 32.86 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.18230 REMARK 3 B22 (A**2) : -10.62930 REMARK 3 B33 (A**2) : -5.85320 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3748 REMARK 3 ANGLE : 1.348 5081 REMARK 3 CHIRALITY : 0.083 598 REMARK 3 PLANARITY : 0.006 604 REMARK 3 DIHEDRAL : 20.637 1368 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 458:496) REMARK 3 ORIGIN FOR THE GROUP (A): -60.0422 -11.6987 6.8957 REMARK 3 T TENSOR REMARK 3 T11: 0.1505 T22: 0.0837 REMARK 3 T33: 0.2073 T12: 0.3038 REMARK 3 T13: 0.0785 T23: 0.1264 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0143 REMARK 3 L33: -0.0103 L12: -0.0125 REMARK 3 L13: -0.0057 L23: 0.0031 REMARK 3 S TENSOR REMARK 3 S11: -0.0065 S12: 0.0472 S13: 0.0335 REMARK 3 S21: -0.0056 S22: 0.0311 S23: -0.0432 REMARK 3 S31: -0.1525 S32: 0.0071 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 497:500) REMARK 3 ORIGIN FOR THE GROUP (A): -62.6022 -24.0907 10.2762 REMARK 3 T TENSOR REMARK 3 T11: 0.1709 T22: 0.1680 REMARK 3 T33: 0.2327 T12: 0.1893 REMARK 3 T13: 0.0375 T23: -0.0501 REMARK 3 L TENSOR REMARK 3 L11: 0.0028 L22: 0.0011 REMARK 3 L33: 0.0035 L12: -0.0009 REMARK 3 L13: -0.0007 L23: 0.0007 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: 0.0002 S13: -0.0039 REMARK 3 S21: -0.0037 S22: 0.0091 S23: -0.0028 REMARK 3 S31: -0.0063 S32: 0.0018 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 501:526) REMARK 3 ORIGIN FOR THE GROUP (A): -57.4971 -15.8079 10.5462 REMARK 3 T TENSOR REMARK 3 T11: 0.1323 T22: 0.0941 REMARK 3 T33: 0.0135 T12: 0.2029 REMARK 3 T13: -0.0496 T23: 0.1762 REMARK 3 L TENSOR REMARK 3 L11: 0.0085 L22: 0.0027 REMARK 3 L33: 0.0106 L12: -0.0024 REMARK 3 L13: -0.0008 L23: -0.0112 REMARK 3 S TENSOR REMARK 3 S11: 0.0422 S12: 0.1368 S13: 0.0485 REMARK 3 S21: -0.0217 S22: -0.0025 S23: -0.0219 REMARK 3 S31: 0.0166 S32: 0.0105 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 527:582) REMARK 3 ORIGIN FOR THE GROUP (A): -52.1316 -23.9571 7.9899 REMARK 3 T TENSOR REMARK 3 T11: -0.0819 T22: -0.2989 REMARK 3 T33: 0.0260 T12: 0.2735 REMARK 3 T13: 0.0052 T23: 0.0655 REMARK 3 L TENSOR REMARK 3 L11: 0.0171 L22: 0.0049 REMARK 3 L33: -0.0066 L12: 0.0059 REMARK 3 L13: 0.0078 L23: -0.0022 REMARK 3 S TENSOR REMARK 3 S11: 0.0669 S12: 0.0917 S13: -0.0334 REMARK 3 S21: -0.0777 S22: 0.0769 S23: 0.0216 REMARK 3 S31: -0.1164 S32: -0.0464 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 191:207) REMARK 3 ORIGIN FOR THE GROUP (A): -59.581 -3.957 15.859 REMARK 3 T TENSOR REMARK 3 T11: 0.3581 T22: 0.3444 REMARK 3 T33: 0.4461 T12: 0.2820 REMARK 3 T13: -0.0581 T23: -0.0607 REMARK 3 L TENSOR REMARK 3 L11: 0.0034 L22: -0.0053 REMARK 3 L33: -0.0038 L12: 0.0041 REMARK 3 L13: 0.0053 L23: 0.0105 REMARK 3 S TENSOR REMARK 3 S11: 0.0484 S12: 0.0271 S13: -0.0927 REMARK 3 S21: 0.0169 S22: 0.0464 S23: 0.0305 REMARK 3 S31: 0.0414 S32: -0.0224 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 211:215) REMARK 3 ORIGIN FOR THE GROUP (A): -42.8199 -6.8006 16.2999 REMARK 3 T TENSOR REMARK 3 T11: 0.4950 T22: 0.4282 REMARK 3 T33: 0.5270 T12: -0.0077 REMARK 3 T13: 0.0575 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0010 REMARK 3 L33: -0.0005 L12: 0.0002 REMARK 3 L13: -0.0004 L23: -0.0006 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: -0.0019 S13: -0.0030 REMARK 3 S21: 0.0039 S22: -0.0010 S23: -0.0027 REMARK 3 S31: 0.0009 S32: -0.0114 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 220:233) REMARK 3 ORIGIN FOR THE GROUP (A): -43.3056 -13.0144 25.1009 REMARK 3 T TENSOR REMARK 3 T11: 0.4138 T22: 0.3591 REMARK 3 T33: 0.3878 T12: 0.0374 REMARK 3 T13: 0.0242 T23: -0.1208 REMARK 3 L TENSOR REMARK 3 L11: 0.0054 L22: 0.0176 REMARK 3 L33: 0.0010 L12: 0.0064 REMARK 3 L13: -0.0006 L23: -0.0029 REMARK 3 S TENSOR REMARK 3 S11: -0.0035 S12: 0.0013 S13: 0.0013 REMARK 3 S21: 0.0025 S22: -0.0042 S23: 0.0003 REMARK 3 S31: -0.0003 S32: -0.0025 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 234:270) REMARK 3 ORIGIN FOR THE GROUP (A): -43.8270 -19.7054 12.9155 REMARK 3 T TENSOR REMARK 3 T11: -0.1396 T22: -0.0415 REMARK 3 T33: -0.4452 T12: 0.0931 REMARK 3 T13: 0.3790 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: -0.0040 L22: 0.0079 REMARK 3 L33: 0.0019 L12: -0.0130 REMARK 3 L13: -0.0130 L23: 0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.0641 S12: 0.0426 S13: 0.1810 REMARK 3 S21: -0.0789 S22: 0.0049 S23: 0.0376 REMARK 3 S31: -0.0293 S32: 0.0319 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN C AND RESID 26:106) REMARK 3 ORIGIN FOR THE GROUP (A): -32.1570 -31.8302 7.3449 REMARK 3 T TENSOR REMARK 3 T11: -0.1898 T22: -0.0548 REMARK 3 T33: -0.4960 T12: 0.0153 REMARK 3 T13: 0.1565 T23: -0.1246 REMARK 3 L TENSOR REMARK 3 L11: 0.0548 L22: -0.0116 REMARK 3 L33: 0.0073 L12: 0.0027 REMARK 3 L13: 0.0256 L23: -0.0239 REMARK 3 S TENSOR REMARK 3 S11: 0.1643 S12: 0.0508 S13: -0.0607 REMARK 3 S21: -0.0263 S22: -0.2442 S23: -0.0434 REMARK 3 S31: -0.0073 S32: 0.1008 S33: 0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN C AND RESID 107:125) REMARK 3 ORIGIN FOR THE GROUP (A): -34.4054 -34.2942 -5.6615 REMARK 3 T TENSOR REMARK 3 T11: 0.0184 T22: 0.1678 REMARK 3 T33: 0.0548 T12: 0.0955 REMARK 3 T13: -0.0564 T23: -0.0475 REMARK 3 L TENSOR REMARK 3 L11: 0.0048 L22: -0.0006 REMARK 3 L33: 0.0037 L12: -0.0053 REMARK 3 L13: -0.0021 L23: -0.0023 REMARK 3 S TENSOR REMARK 3 S11: 0.0078 S12: 0.0655 S13: 0.0112 REMARK 3 S21: -0.0079 S22: 0.0040 S23: -0.0122 REMARK 3 S31: 0.0433 S32: 0.0069 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN C AND RESID 126:202) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4742 -40.7562 22.2100 REMARK 3 T TENSOR REMARK 3 T11: -0.9877 T22: -0.9461 REMARK 3 T33: -0.0922 T12: 0.7421 REMARK 3 T13: 0.0159 T23: 0.1045 REMARK 3 L TENSOR REMARK 3 L11: -0.0064 L22: -0.0239 REMARK 3 L33: -0.0345 L12: -0.0255 REMARK 3 L13: 0.0265 L23: -0.0160 REMARK 3 S TENSOR REMARK 3 S11: 0.0024 S12: -0.2252 S13: 0.0087 REMARK 3 S21: 0.0059 S22: -0.0407 S23: 0.1035 REMARK 3 S31: 0.1810 S32: 0.4196 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN C AND RESID 203:265) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2830 -34.2561 1.7213 REMARK 3 T TENSOR REMARK 3 T11: -0.3366 T22: 0.1581 REMARK 3 T33: -0.0311 T12: 0.0263 REMARK 3 T13: 0.0283 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: -0.0024 L22: -0.0141 REMARK 3 L33: -0.0011 L12: -0.0005 REMARK 3 L13: -0.0018 L23: -0.0073 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: 0.0596 S13: 0.0514 REMARK 3 S21: 0.0391 S22: 0.0129 S23: 0.0066 REMARK 3 S31: 0.0273 S32: 0.0872 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN C AND RESID 266:324) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5151 -37.9314 20.0859 REMARK 3 T TENSOR REMARK 3 T11: -0.4914 T22: -0.2716 REMARK 3 T33: -0.0189 T12: 0.4816 REMARK 3 T13: 0.2370 T23: -0.2578 REMARK 3 L TENSOR REMARK 3 L11: 0.0035 L22: 0.0002 REMARK 3 L33: -0.0080 L12: 0.0007 REMARK 3 L13: -0.0105 L23: 0.0058 REMARK 3 S TENSOR REMARK 3 S11: 0.0202 S12: 0.0091 S13: 0.0475 REMARK 3 S21: -0.0629 S22: -0.0340 S23: 0.0198 REMARK 3 S31: -0.1075 S32: 0.2341 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EAG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071372. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.02 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99583 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19457 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 77.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 15.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2V8Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, 12% METHANOL, 2% 1,4-BUTANODIOL, REMARK 280 PH 6.02 , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.66150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.66150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 54.33400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.64150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 54.33400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.64150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.66150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 54.33400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.64150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.66150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 54.33400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 75.64150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 453 REMARK 465 PRO A 454 REMARK 465 HIS A 455 REMARK 465 MET A 456 REMARK 465 GLY A 457 REMARK 465 ASN A 532 REMARK 465 ASP A 533 REMARK 465 GLU A 534 REMARK 465 VAL A 535 REMARK 465 GLU A 536 REMARK 465 GLN A 537 REMARK 465 GLY A 538 REMARK 465 ASP A 539 REMARK 465 ASP A 540 REMARK 465 VAL A 541 REMARK 465 ILE A 542 REMARK 465 MET A 543 REMARK 465 GLU A 544 REMARK 465 SER A 545 REMARK 465 LEU A 546 REMARK 465 THR A 547 REMARK 465 PRO A 548 REMARK 465 PRO A 549 REMARK 465 PRO A 550 REMARK 465 LEU A 551 REMARK 465 SER A 552 REMARK 465 VAL A 553 REMARK 465 SER A 554 REMARK 465 GLY A 555 REMARK 465 VAL A 556 REMARK 465 MET A 557 REMARK 465 PRO A 558 REMARK 465 TYR B 192 REMARK 465 ILE B 193 REMARK 465 SER B 194 REMARK 465 LYS B 195 REMARK 465 PRO B 196 REMARK 465 GLU B 197 REMARK 465 GLU B 198 REMARK 465 ARG B 199 REMARK 465 PHE B 200 REMARK 465 LYS B 201 REMARK 465 PRO B 208 REMARK 465 HIS B 209 REMARK 465 LEU B 210 REMARK 465 ASN B 216 REMARK 465 LYS B 217 REMARK 465 ASP B 218 REMARK 465 THR B 219 REMARK 465 CYS B 223 REMARK 465 ASP B 224 REMARK 465 PRO B 225 REMARK 465 ALA B 226 REMARK 465 LEU B 227 REMARK 465 LEU B 228 REMARK 465 PRO B 229 REMARK 465 GLU B 230 REMARK 465 PRO B 231 REMARK 465 ASN B 232 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 SER C 3 REMARK 465 VAL C 4 REMARK 465 ALA C 5 REMARK 465 ALA C 6 REMARK 465 GLU C 7 REMARK 465 SER C 8 REMARK 465 ALA C 9 REMARK 465 PRO C 10 REMARK 465 ALA C 11 REMARK 465 PRO C 12 REMARK 465 GLU C 13 REMARK 465 ASN C 14 REMARK 465 GLU C 15 REMARK 465 HIS C 16 REMARK 465 SER C 17 REMARK 465 GLN C 18 REMARK 465 GLU C 19 REMARK 465 THR C 20 REMARK 465 PRO C 21 REMARK 465 GLU C 22 REMARK 465 SER C 23 REMARK 465 ASN C 24 REMARK 465 SER C 25 REMARK 465 GLU C 251 REMARK 465 LYS C 252 REMARK 465 THR C 253 REMARK 465 TYR C 254 REMARK 465 ASN C 255 REMARK 465 SER C 269 REMARK 465 HIS C 270 REMARK 465 TYR C 271 REMARK 465 PHE C 272 REMARK 465 GLU C 273 REMARK 465 GLY C 325 REMARK 465 GLY C 326 REMARK 465 GLU C 327 REMARK 465 LYS C 328 REMARK 465 LYS C 329 REMARK 465 PRO C 330 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 492 166.82 167.78 REMARK 500 PRO A 493 12.63 -65.60 REMARK 500 TYR A 494 12.65 -142.58 REMARK 500 ASP A 519 -140.42 -122.19 REMARK 500 PHE A 569 -70.45 -51.63 REMARK 500 GLN B 212 -49.30 159.22 REMARK 500 ASN B 237 0.95 91.31 REMARK 500 ALA B 253 137.84 -179.20 REMARK 500 LYS B 258 -127.28 57.90 REMARK 500 VAL C 56 -54.01 -28.28 REMARK 500 GLU C 110 34.48 -148.92 REMARK 500 LYS C 126 77.35 -117.78 REMARK 500 LYS C 190 172.04 -53.66 REMARK 500 THR C 210 134.35 -39.40 REMARK 500 ARG C 223 67.83 61.88 REMARK 500 ASP C 238 -156.95 -170.60 REMARK 500 ALA C 249 65.32 -56.56 REMARK 500 LEU C 257 -6.26 82.97 REMARK 500 HIS C 267 31.47 178.59 REMARK 500 GLU C 295 -17.11 84.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TAM C 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4EAI RELATED DB: PDB REMARK 900 RELATED ID: 4EAJ RELATED DB: PDB REMARK 900 RELATED ID: 4EAK RELATED DB: PDB REMARK 900 RELATED ID: 4EAL RELATED DB: PDB DBREF 4EAG A 458 582 UNP O18645 O18645_DROME 458 582 DBREF 4EAG B 187 270 UNP P80386 AAKB1_RAT 187 270 DBREF 4EAG C 1 330 UNP P80385 AAKG1_RAT 1 330 SEQADV 4EAG GLY A 453 UNP O18645 EXPRESSION TAG SEQADV 4EAG PRO A 454 UNP O18645 EXPRESSION TAG SEQADV 4EAG HIS A 455 UNP O18645 EXPRESSION TAG SEQADV 4EAG MET A 456 UNP O18645 EXPRESSION TAG SEQADV 4EAG GLY A 457 UNP O18645 EXPRESSION TAG SEQADV 4EAG MET B 186 UNP P80386 EXPRESSION TAG SEQRES 1 A 130 GLY PRO HIS MET GLY ALA LYS TRP HIS LEU GLY ILE ARG SEQRES 2 A 130 SER GLN SER LYS PRO ASN ASP ILE MET LEU GLU VAL TYR SEQRES 3 A 130 ARG ALA MET LYS ALA LEU SER TYR GLU TRP LYS ILE ILE SEQRES 4 A 130 ASN PRO TYR HIS VAL ARG VAL ARG ARG GLN ASN VAL LYS SEQRES 5 A 130 THR GLY LYS PHE SER LYS MET SER LEU GLN LEU TYR GLN SEQRES 6 A 130 VAL ASP ALA LYS SER TYR LEU LEU ASP PHE LYS SER LEU SEQRES 7 A 130 THR ASN ASP GLU VAL GLU GLN GLY ASP ASP VAL ILE MET SEQRES 8 A 130 GLU SER LEU THR PRO PRO PRO LEU SER VAL SER GLY VAL SEQRES 9 A 130 MET PRO LEU GLN PRO THR GLY HIS HIS THR MET GLU PHE SEQRES 10 A 130 PHE GLU MET CYS ALA ALA LEU ILE ILE GLN LEU ALA ARG SEQRES 1 B 85 MET TYR HIS GLN GLU PRO TYR ILE SER LYS PRO GLU GLU SEQRES 2 B 85 ARG PHE LYS ALA PRO PRO ILE LEU PRO PRO HIS LEU LEU SEQRES 3 B 85 GLN VAL ILE LEU ASN LYS ASP THR GLY ILE SER CYS ASP SEQRES 4 B 85 PRO ALA LEU LEU PRO GLU PRO ASN HIS VAL MET LEU ASN SEQRES 5 B 85 HIS LEU TYR ALA LEU SER ILE LYS ASP GLY VAL MET VAL SEQRES 6 B 85 LEU SER ALA THR HIS ARG TYR LYS LYS LYS TYR VAL THR SEQRES 7 B 85 THR LEU LEU TYR LYS PRO ILE SEQRES 1 C 330 MET GLU SER VAL ALA ALA GLU SER ALA PRO ALA PRO GLU SEQRES 2 C 330 ASN GLU HIS SER GLN GLU THR PRO GLU SER ASN SER SER SEQRES 3 C 330 VAL TYR THR THR PHE MET LYS SER HIS ARG CYS TYR ASP SEQRES 4 C 330 LEU ILE PRO THR SER SER LYS LEU VAL VAL PHE ASP THR SEQRES 5 C 330 SER LEU GLN VAL LYS LYS ALA PHE PHE ALA LEU VAL THR SEQRES 6 C 330 ASN GLY VAL ARG ALA ALA PRO LEU TRP ASP SER LYS LYS SEQRES 7 C 330 GLN SER PHE VAL GLY MET LEU THR ILE THR ASP PHE ILE SEQRES 8 C 330 ASN ILE LEU HIS ARG TYR TYR LYS SER ALA LEU VAL GLN SEQRES 9 C 330 ILE TYR GLU LEU GLU GLU HIS LYS ILE GLU THR TRP ARG SEQRES 10 C 330 GLU VAL TYR LEU GLN ASP SER PHE LYS PRO LEU VAL CYS SEQRES 11 C 330 ILE SER PRO ASN ALA SER LEU PHE ASP ALA VAL SER SER SEQRES 12 C 330 LEU ILE ARG ASN LYS ILE HIS ARG LEU PRO VAL ILE ASP SEQRES 13 C 330 PRO GLU SER GLY ASN THR LEU TYR ILE LEU THR HIS LYS SEQRES 14 C 330 ARG ILE LEU LYS PHE LEU LYS LEU PHE ILE THR GLU PHE SEQRES 15 C 330 PRO LYS PRO GLU PHE MET SER LYS SER LEU GLU GLU LEU SEQRES 16 C 330 GLN ILE GLY THR TYR ALA ASN ILE ALA MET VAL ARG THR SEQRES 17 C 330 THR THR PRO VAL TYR VAL ALA LEU GLY ILE PHE VAL GLN SEQRES 18 C 330 HIS ARG VAL SER ALA LEU PRO VAL VAL ASP GLU LYS GLY SEQRES 19 C 330 ARG VAL VAL ASP ILE TYR SER LYS PHE ASP VAL ILE ASN SEQRES 20 C 330 LEU ALA ALA GLU LYS THR TYR ASN ASN LEU ASP VAL SER SEQRES 21 C 330 VAL THR LYS ALA LEU GLN HIS ARG SER HIS TYR PHE GLU SEQRES 22 C 330 GLY VAL LEU LYS CYS TYR LEU HIS GLU THR LEU GLU ALA SEQRES 23 C 330 ILE ILE ASN ARG LEU VAL GLU ALA GLU VAL HIS ARG LEU SEQRES 24 C 330 VAL VAL VAL ASP GLU HIS ASP VAL VAL LYS GLY ILE VAL SEQRES 25 C 330 SER LEU SER ASP ILE LEU GLN ALA LEU VAL LEU THR GLY SEQRES 26 C 330 GLY GLU LYS LYS PRO HET ATP C 401 31 HET ATP C 402 31 HET TAM C 403 11 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM TAM TRIS(HYDROXYETHYL)AMINOMETHANE FORMUL 4 ATP 2(C10 H16 N5 O13 P3) FORMUL 6 TAM C7 H17 N O3 FORMUL 7 HOH *81(H2 O) HELIX 1 1 LYS A 469 LEU A 484 1 16 HELIX 2 2 HIS A 564 ARG A 582 1 19 HELIX 3 3 VAL C 27 LYS C 33 1 7 HELIX 4 4 ARG C 36 ILE C 41 5 6 HELIX 5 5 GLN C 55 ASN C 66 1 12 HELIX 6 6 THR C 86 SER C 100 1 15 HELIX 7 7 LEU C 102 GLU C 107 1 6 HELIX 8 8 LYS C 112 TYR C 120 1 9 HELIX 9 9 LEU C 121 LYS C 126 1 6 HELIX 10 10 SER C 136 ASN C 147 1 12 HELIX 11 11 THR C 167 GLU C 181 1 15 HELIX 12 12 GLU C 186 LYS C 190 5 5 HELIX 13 13 SER C 191 GLN C 196 1 6 HELIX 14 14 PRO C 211 ARG C 223 1 13 HELIX 15 15 LYS C 242 ALA C 249 1 8 HELIX 16 16 SER C 260 LEU C 265 1 6 HELIX 17 17 THR C 283 GLU C 295 1 13 HELIX 18 18 LEU C 314 VAL C 322 1 9 SHEET 1 A 8 VAL B 213 ILE B 214 0 SHEET 2 A 8 TRP A 460 LEU A 462 -1 N TRP A 460 O ILE B 214 SHEET 3 A 8 TYR B 240 LEU B 242 -1 O ALA B 241 N HIS A 461 SHEET 4 A 8 VAL B 248 TYR B 257 -1 O SER B 252 N TYR B 240 SHEET 5 A 8 LYS B 260 PRO B 269 -1 O LYS B 268 N MET B 249 SHEET 6 A 8 SER C 44 ASP C 51 1 O VAL C 49 N LEU B 265 SHEET 7 A 8 ALA C 71 ASP C 75 1 O TRP C 74 N PHE C 50 SHEET 8 A 8 SER C 80 LEU C 85 -1 O LEU C 85 N ALA C 71 SHEET 1 B 4 GLU A 487 ASN A 492 0 SHEET 2 B 4 HIS A 495 GLN A 501 -1 O ARG A 499 N GLU A 487 SHEET 3 B 4 PHE A 508 GLN A 517 -1 O LEU A 513 N VAL A 496 SHEET 4 B 4 TYR A 523 SER A 529 -1 O LYS A 528 N SER A 512 SHEET 1 C 2 ILE B 221 SER B 222 0 SHEET 2 C 2 VAL B 234 MET B 235 1 O VAL B 234 N SER B 222 SHEET 1 D 2 LEU C 152 ILE C 155 0 SHEET 2 D 2 THR C 162 LEU C 166 -1 O TYR C 164 N VAL C 154 SHEET 1 E 3 VAL C 206 ARG C 207 0 SHEET 2 E 3 ALA C 226 VAL C 230 1 O PRO C 228 N VAL C 206 SHEET 3 E 3 VAL C 236 SER C 241 -1 O TYR C 240 N LEU C 227 SHEET 1 F 3 LYS C 277 CYS C 278 0 SHEET 2 F 3 ARG C 298 VAL C 302 1 O VAL C 302 N CYS C 278 SHEET 3 F 3 VAL C 308 SER C 313 -1 O VAL C 312 N LEU C 299 SITE 1 AC1 17 MET C 84 THR C 86 ILE C 87 THR C 88 SITE 2 AC1 17 ASP C 89 GLN C 122 PRO C 127 LEU C 128 SITE 3 AC1 17 VAL C 129 ILE C 149 HIS C 150 ARG C 151 SITE 4 AC1 17 PRO C 153 SER C 225 PHE C 243 HOH C 509 SITE 5 AC1 17 HOH C 539 SITE 1 AC2 15 HIS C 150 THR C 199 ALA C 204 VAL C 224 SITE 2 AC2 15 SER C 225 ALA C 226 PRO C 228 HIS C 297 SITE 3 AC2 15 ARG C 298 SER C 313 LEU C 314 SER C 315 SITE 4 AC2 15 ASP C 316 HOH C 515 HOH C 538 SITE 1 AC3 11 VAL C 68 ARG C 69 ARG C 151 THR C 167 SITE 2 AC3 11 LYS C 169 ARG C 170 HIS C 297 HOH C 503 SITE 3 AC3 11 HOH C 521 HOH C 527 HOH C 536 CRYST1 108.668 151.283 109.323 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009202 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009147 0.00000