data_4EBD # _entry.id 4EBD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4EBD pdb_00004ebd 10.2210/pdb4ebd/pdb NDB NA1698 ? ? RCSB RCSB071405 ? ? WWPDB D_1000071405 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1T3N . unspecified PDB 2ALZ . unspecified PDB 3GV5 . unspecified PDB 3GV7 . unspecified PDB 3GV8 . unspecified PDB 3H40 . unspecified PDB 4EBC . unspecified PDB 4EBE . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4EBD _pdbx_database_status.recvd_initial_deposition_date 2012-03-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Eoff, R.L.' 1 'Ketkar, A.' 2 'Banerjee, S.' 3 # _citation.id primary _citation.title 'A Nucleotide-Analogue-Induced Gain of Function Corrects the Error-Prone Nature of Human DNA Polymerase iota.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 134 _citation.page_first 10698 _citation.page_last 10705 _citation.year 2012 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22632140 _citation.pdbx_database_id_DOI 10.1021/ja304176q # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ketkar, A.' 1 ? primary 'Zafar, M.K.' 2 ? primary 'Banerjee, S.' 3 ? primary 'Marquez, V.E.' 4 ? primary 'Egli, M.' 5 ? primary 'Eoff, R.L.' 6 ? # _cell.entry_id 4EBD _cell.length_a 97.776 _cell.length_b 97.776 _cell.length_c 202.739 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4EBD _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase iota' 47027.344 1 2.7.7.7 ? 'UNP residues 26-445' ? 2 polymer syn "5'-D(P*AP*GP*GP*AP*CP*CP*(DOC))-3'" 2091.414 1 ? ? ? '7-mer primer DNA' 3 polymer syn "5'-D(P*CP*TP*GP*GP*GP*TP*CP*CP*T)-3'" 2722.784 1 ? ? ? '9-mer template DNA' 4 non-polymer syn ;South-methanocarba-2'-deoxyadenosine triphosphate ; 501.220 1 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 7 water nat water 18.015 146 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Eta2, RAD30 homolog B' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DG)(DG)(DA)(DC)(DC)(DOC)' AGGACCC P ? 3 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DG)(DG)(DT)(DC)(DC)(DT)' CTGGGTCCT T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 LEU n 1 4 ALA n 1 5 ASP n 1 6 VAL n 1 7 GLY n 1 8 ALA n 1 9 ALA n 1 10 ALA n 1 11 SER n 1 12 SER n 1 13 GLN n 1 14 GLY n 1 15 VAL n 1 16 HIS n 1 17 ASP n 1 18 GLN n 1 19 VAL n 1 20 LEU n 1 21 PRO n 1 22 THR n 1 23 PRO n 1 24 ASN n 1 25 ALA n 1 26 SER n 1 27 SER n 1 28 ARG n 1 29 VAL n 1 30 ILE n 1 31 VAL n 1 32 HIS n 1 33 VAL n 1 34 ASP n 1 35 LEU n 1 36 ASP n 1 37 CYS n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 GLN n 1 42 VAL n 1 43 GLU n 1 44 MET n 1 45 ILE n 1 46 SER n 1 47 ASN n 1 48 PRO n 1 49 GLU n 1 50 LEU n 1 51 LYS n 1 52 ASP n 1 53 LYS n 1 54 PRO n 1 55 LEU n 1 56 GLY n 1 57 VAL n 1 58 GLN n 1 59 GLN n 1 60 LYS n 1 61 TYR n 1 62 LEU n 1 63 VAL n 1 64 VAL n 1 65 THR n 1 66 CYS n 1 67 ASN n 1 68 TYR n 1 69 GLU n 1 70 ALA n 1 71 ARG n 1 72 LYS n 1 73 LEU n 1 74 GLY n 1 75 VAL n 1 76 LYS n 1 77 LYS n 1 78 LEU n 1 79 MET n 1 80 ASN n 1 81 VAL n 1 82 ARG n 1 83 ASP n 1 84 ALA n 1 85 LYS n 1 86 GLU n 1 87 LYS n 1 88 CYS n 1 89 PRO n 1 90 GLN n 1 91 LEU n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 ASN n 1 96 GLY n 1 97 GLU n 1 98 ASP n 1 99 LEU n 1 100 THR n 1 101 ARG n 1 102 TYR n 1 103 ARG n 1 104 GLU n 1 105 MET n 1 106 SER n 1 107 TYR n 1 108 LYS n 1 109 VAL n 1 110 THR n 1 111 GLU n 1 112 LEU n 1 113 LEU n 1 114 GLU n 1 115 GLU n 1 116 PHE n 1 117 SER n 1 118 PRO n 1 119 VAL n 1 120 VAL n 1 121 GLU n 1 122 ARG n 1 123 LEU n 1 124 GLY n 1 125 PHE n 1 126 ASP n 1 127 GLU n 1 128 ASN n 1 129 PHE n 1 130 VAL n 1 131 ASP n 1 132 LEU n 1 133 THR n 1 134 GLU n 1 135 MET n 1 136 VAL n 1 137 GLU n 1 138 LYS n 1 139 ARG n 1 140 LEU n 1 141 GLN n 1 142 GLN n 1 143 LEU n 1 144 GLN n 1 145 SER n 1 146 ASP n 1 147 GLU n 1 148 LEU n 1 149 SER n 1 150 ALA n 1 151 VAL n 1 152 THR n 1 153 VAL n 1 154 SER n 1 155 GLY n 1 156 HIS n 1 157 VAL n 1 158 TYR n 1 159 ASN n 1 160 ASN n 1 161 GLN n 1 162 SER n 1 163 ILE n 1 164 ASN n 1 165 LEU n 1 166 LEU n 1 167 ASP n 1 168 VAL n 1 169 LEU n 1 170 HIS n 1 171 ILE n 1 172 ARG n 1 173 LEU n 1 174 LEU n 1 175 VAL n 1 176 GLY n 1 177 SER n 1 178 GLN n 1 179 ILE n 1 180 ALA n 1 181 ALA n 1 182 GLU n 1 183 MET n 1 184 ARG n 1 185 GLU n 1 186 ALA n 1 187 MET n 1 188 TYR n 1 189 ASN n 1 190 GLN n 1 191 LEU n 1 192 GLY n 1 193 LEU n 1 194 THR n 1 195 GLY n 1 196 CYS n 1 197 ALA n 1 198 GLY n 1 199 VAL n 1 200 ALA n 1 201 SER n 1 202 ASN n 1 203 LYS n 1 204 LEU n 1 205 LEU n 1 206 ALA n 1 207 LYS n 1 208 LEU n 1 209 VAL n 1 210 SER n 1 211 GLY n 1 212 VAL n 1 213 PHE n 1 214 LYS n 1 215 PRO n 1 216 ASN n 1 217 GLN n 1 218 GLN n 1 219 THR n 1 220 VAL n 1 221 LEU n 1 222 LEU n 1 223 PRO n 1 224 GLU n 1 225 SER n 1 226 CYS n 1 227 GLN n 1 228 HIS n 1 229 LEU n 1 230 ILE n 1 231 HIS n 1 232 SER n 1 233 LEU n 1 234 ASN n 1 235 HIS n 1 236 ILE n 1 237 LYS n 1 238 GLU n 1 239 ILE n 1 240 PRO n 1 241 GLY n 1 242 ILE n 1 243 GLY n 1 244 TYR n 1 245 LYS n 1 246 THR n 1 247 ALA n 1 248 LYS n 1 249 CYS n 1 250 LEU n 1 251 GLU n 1 252 ALA n 1 253 LEU n 1 254 GLY n 1 255 ILE n 1 256 ASN n 1 257 SER n 1 258 VAL n 1 259 ARG n 1 260 ASP n 1 261 LEU n 1 262 GLN n 1 263 THR n 1 264 PHE n 1 265 SER n 1 266 PRO n 1 267 LYS n 1 268 ILE n 1 269 LEU n 1 270 GLU n 1 271 LYS n 1 272 GLU n 1 273 LEU n 1 274 GLY n 1 275 ILE n 1 276 SER n 1 277 VAL n 1 278 ALA n 1 279 GLN n 1 280 ARG n 1 281 ILE n 1 282 GLN n 1 283 LYS n 1 284 LEU n 1 285 SER n 1 286 PHE n 1 287 GLY n 1 288 GLU n 1 289 ASP n 1 290 ASN n 1 291 SER n 1 292 PRO n 1 293 VAL n 1 294 ILE n 1 295 LEU n 1 296 SER n 1 297 GLY n 1 298 PRO n 1 299 PRO n 1 300 GLN n 1 301 SER n 1 302 PHE n 1 303 SER n 1 304 GLU n 1 305 GLU n 1 306 ASP n 1 307 SER n 1 308 PHE n 1 309 LYS n 1 310 LYS n 1 311 CYS n 1 312 SER n 1 313 SER n 1 314 GLU n 1 315 VAL n 1 316 GLU n 1 317 ALA n 1 318 LYS n 1 319 ASN n 1 320 LYS n 1 321 ILE n 1 322 GLU n 1 323 GLU n 1 324 LEU n 1 325 LEU n 1 326 ALA n 1 327 SER n 1 328 LEU n 1 329 LEU n 1 330 ASN n 1 331 ARG n 1 332 VAL n 1 333 CYS n 1 334 GLN n 1 335 ASP n 1 336 GLY n 1 337 ARG n 1 338 LYS n 1 339 PRO n 1 340 HIS n 1 341 THR n 1 342 VAL n 1 343 ARG n 1 344 LEU n 1 345 ILE n 1 346 ILE n 1 347 ARG n 1 348 ARG n 1 349 TYR n 1 350 SER n 1 351 SER n 1 352 GLU n 1 353 LYS n 1 354 HIS n 1 355 TYR n 1 356 GLY n 1 357 ARG n 1 358 GLU n 1 359 SER n 1 360 ARG n 1 361 GLN n 1 362 CYS n 1 363 PRO n 1 364 ILE n 1 365 PRO n 1 366 SER n 1 367 HIS n 1 368 VAL n 1 369 ILE n 1 370 GLN n 1 371 LYS n 1 372 LEU n 1 373 GLY n 1 374 THR n 1 375 GLY n 1 376 ASN n 1 377 TYR n 1 378 ASP n 1 379 VAL n 1 380 MET n 1 381 THR n 1 382 PRO n 1 383 MET n 1 384 VAL n 1 385 ASP n 1 386 ILE n 1 387 LEU n 1 388 MET n 1 389 LYS n 1 390 LEU n 1 391 PHE n 1 392 ARG n 1 393 ASN n 1 394 MET n 1 395 VAL n 1 396 ASN n 1 397 VAL n 1 398 LYS n 1 399 MET n 1 400 PRO n 1 401 PHE n 1 402 HIS n 1 403 LEU n 1 404 THR n 1 405 LEU n 1 406 LEU n 1 407 SER n 1 408 VAL n 1 409 CYS n 1 410 PHE n 1 411 CYS n 1 412 ASN n 1 413 LEU n 1 414 LYS n 1 415 ALA n 1 416 LEU n 1 417 ASN n 1 418 THR n 1 419 ALA n 1 420 LYS n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 DC n 2 7 DOC n 3 1 DC n 3 2 DT n 3 3 DG n 3 4 DG n 3 5 DG n 3 6 DT n 3 7 DC n 3 8 DC n 3 9 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POLI, RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBG101 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POLI_HUMAN Q9UNA4 1 ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; 26 ? 2 PDB 4EBD 4EBD 2 'AGGACC(DOC)' 1 ? 3 PDB 4EBD 4EBD 3 CTGGGTCCT 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4EBD A 1 ? 420 ? Q9UNA4 26 ? 445 ? 1 420 2 2 4EBD P 1 ? 7 ? 4EBD 1 ? 7 ? 1 7 3 3 4EBD T 1 ? 9 ? 4EBD 3 ? 11 ? 3 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0OJ non-polymer . ;South-methanocarba-2'-deoxyadenosine triphosphate ; ? 'C12 H18 N5 O11 P3' 501.220 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4EBD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_percent_sol 54.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.9 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;20 mM Tris-HCl, pH 7.9, 5% glycerol, 10 mM 2-mercaptoethanol, 150 mM calcium chloride, 12% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-12-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(220) side bounce' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4EBD _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 84.676 _reflns.d_resolution_high 2.57 _reflns.number_obs 18978 _reflns.number_all 18985 _reflns.percent_possible_obs 96.9 _reflns.pdbx_Rmerge_I_obs 0.027 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 51.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.4 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.57 _reflns_shell.d_res_low 2.64 _reflns_shell.percent_possible_all 92.3 _reflns_shell.Rmerge_I_obs 0.409 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.3 _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4EBD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 18581 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.888 _refine.ls_d_res_high 2.571 _refine.ls_percent_reflns_obs 97.89 _refine.ls_R_factor_obs 0.2120 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2062 _refine.ls_R_factor_R_free 0.2629 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.02 _refine.ls_number_reflns_R_free 1861 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 7.1822 _refine.aniso_B[2][2] 7.1822 _refine.aniso_B[3][3] -8.6368 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.330 _refine.solvent_model_param_bsol 42.130 _refine.pdbx_solvent_vdw_probe_radii 1.30 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.11 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3GV5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ANISOTROPIC _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.83 _refine.pdbx_overall_phase_error 26.72 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4EBD _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs 0.3308 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2974 _refine_hist.pdbx_number_atoms_nucleic_acid 325 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 146 _refine_hist.number_atoms_total 3491 _refine_hist.d_res_high 2.571 _refine_hist.d_res_low 48.888 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.017 ? ? 3441 'X-RAY DIFFRACTION' ? f_angle_d 1.370 ? ? 4687 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 18.691 ? ? 1349 'X-RAY DIFFRACTION' ? f_chiral_restr 0.077 ? ? 541 'X-RAY DIFFRACTION' ? f_plane_restr 0.008 ? ? 538 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.5710 2.6405 1186 0.2755 93.00 0.3325 . . 131 . . . . 'X-RAY DIFFRACTION' . 2.6405 2.7182 1202 0.2510 94.00 0.3287 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.7182 2.8059 1217 0.2433 95.00 0.2866 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.8059 2.9062 1227 0.2336 96.00 0.3247 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.9062 3.0225 1250 0.2331 97.00 0.2899 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.0225 3.1600 1281 0.2168 99.00 0.3105 . . 145 . . . . 'X-RAY DIFFRACTION' . 3.1600 3.3266 1275 0.2151 100.00 0.2942 . . 141 . . . . 'X-RAY DIFFRACTION' . 3.3266 3.5350 1308 0.2051 100.00 0.2975 . . 145 . . . . 'X-RAY DIFFRACTION' . 3.5350 3.8078 1300 0.2017 100.00 0.2717 . . 145 . . . . 'X-RAY DIFFRACTION' . 3.8078 4.1908 1312 0.1846 100.00 0.2168 . . 145 . . . . 'X-RAY DIFFRACTION' . 4.1908 4.7968 1338 0.1621 100.00 0.2185 . . 148 . . . . 'X-RAY DIFFRACTION' . 4.7968 6.0417 1355 0.2028 100.00 0.2515 . . 151 . . . . 'X-RAY DIFFRACTION' . 6.0417 48.8968 1469 0.2168 100.00 0.2422 . . 164 . . . . # _struct.entry_id 4EBD _struct.title ;Conformationally Restrained North-methanocarba-2'-deoxyadenosine Corrects the Error-Prone Nature of Human DNA Polymerase Iota ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4EBD _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'polymerase, TRANSFERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 37 ? ASN A 47 ? CYS A 37 ASN A 47 1 ? 11 HELX_P HELX_P2 2 ASN A 67 ? LYS A 72 ? ASN A 67 LYS A 72 1 ? 6 HELX_P HELX_P3 3 VAL A 81 ? GLU A 86 ? VAL A 81 GLU A 86 1 ? 6 HELX_P HELX_P4 4 LEU A 99 ? SER A 117 ? LEU A 99 SER A 117 1 ? 19 HELX_P HELX_P5 5 LEU A 132 ? LEU A 143 ? LEU A 132 LEU A 143 1 ? 12 HELX_P HELX_P6 6 ASP A 146 ? ALA A 150 ? ASP A 146 ALA A 150 5 ? 5 HELX_P HELX_P7 7 ASN A 159 ? GLN A 161 ? ASN A 159 GLN A 161 5 ? 3 HELX_P HELX_P8 8 ASP A 167 ? GLY A 192 ? ASP A 167 GLY A 192 1 ? 26 HELX_P HELX_P9 9 ASN A 202 ? SER A 210 ? ASN A 202 SER A 210 1 ? 9 HELX_P HELX_P10 10 LEU A 222 ? GLU A 224 ? LEU A 222 GLU A 224 5 ? 3 HELX_P HELX_P11 11 SER A 225 ? SER A 232 ? SER A 225 SER A 232 1 ? 8 HELX_P HELX_P12 12 HIS A 235 ? ILE A 239 ? HIS A 235 ILE A 239 5 ? 5 HELX_P HELX_P13 13 GLY A 243 ? GLU A 251 ? GLY A 243 GLU A 251 1 ? 9 HELX_P HELX_P14 14 ALA A 252 ? GLY A 254 ? ALA A 252 GLY A 254 5 ? 3 HELX_P HELX_P15 15 SER A 257 ? PHE A 264 ? SER A 257 PHE A 264 1 ? 8 HELX_P HELX_P16 16 SER A 265 ? GLY A 274 ? SER A 265 GLY A 274 1 ? 10 HELX_P HELX_P17 17 GLY A 274 ? SER A 285 ? GLY A 274 SER A 285 1 ? 12 HELX_P HELX_P18 18 SER A 313 ? VAL A 332 ? SER A 313 VAL A 332 1 ? 20 HELX_P HELX_P19 19 PRO A 365 ? GLN A 370 ? PRO A 365 GLN A 370 5 ? 6 HELX_P HELX_P20 20 VAL A 379 ? VAL A 395 ? VAL A 379 VAL A 395 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 6 "O3'" ? ? ? 1_555 B DOC 7 P ? ? P DC 6 P DOC 7 1_555 ? ? ? ? ? ? ? 1.604 ? ? metalc1 metalc ? ? A ASP 34 OD2 ? ? ? 1_555 E CA . CA ? ? A ASP 34 A CA 502 1_555 ? ? ? ? ? ? ? 2.884 ? ? metalc2 metalc ? ? A ASP 34 OD1 ? ? ? 1_555 F CA . CA ? ? A ASP 34 A CA 503 1_555 ? ? ? ? ? ? ? 2.747 ? ? metalc3 metalc ? ? A LEU 35 O ? ? ? 1_555 F CA . CA ? ? A LEU 35 A CA 503 1_555 ? ? ? ? ? ? ? 2.766 ? ? metalc4 metalc ? ? A GLU 127 OE2 ? ? ? 1_555 E CA . CA ? ? A GLU 127 A CA 502 1_555 ? ? ? ? ? ? ? 2.903 ? ? metalc5 metalc ? ? A LYS 237 O ? ? ? 1_555 G CA . CA ? ? A LYS 237 A CA 504 1_555 ? ? ? ? ? ? ? 2.914 ? ? metalc6 metalc ? ? A ILE 239 O ? ? ? 1_555 G CA . CA ? ? A ILE 239 A CA 504 1_555 ? ? ? ? ? ? ? 3.191 ? ? metalc7 metalc ? ? A ILE 242 O ? ? ? 1_555 G CA . CA ? ? A ILE 242 A CA 504 1_555 ? ? ? ? ? ? ? 2.989 ? ? metalc8 metalc ? ? D 0OJ . OAF ? ? ? 1_555 F CA . CA ? ? A 0OJ 501 A CA 503 1_555 ? ? ? ? ? ? ? 2.706 ? ? metalc9 metalc ? ? D 0OJ . OAI ? ? ? 1_555 F CA . CA ? ? A 0OJ 501 A CA 503 1_555 ? ? ? ? ? ? ? 2.846 ? ? metalc10 metalc ? ? D 0OJ . OAC ? ? ? 1_555 F CA . CA ? ? A 0OJ 501 A CA 503 1_555 ? ? ? ? ? ? ? 3.122 ? ? metalc11 metalc ? ? D 0OJ . OAT ? ? ? 1_555 F CA . CA ? ? A 0OJ 501 A CA 503 1_555 ? ? ? ? ? ? ? 3.183 ? ? metalc12 metalc ? ? E CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 502 A HOH 651 1_555 ? ? ? ? ? ? ? 2.989 ? ? metalc13 metalc ? ? E CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 502 A HOH 662 1_555 ? ? ? ? ? ? ? 3.014 ? ? metalc14 metalc ? ? E CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 502 A HOH 707 1_555 ? ? ? ? ? ? ? 3.028 ? ? metalc15 metalc ? ? F CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 503 A HOH 722 1_555 ? ? ? ? ? ? ? 3.153 ? ? metalc16 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 504 A HOH 702 1_555 ? ? ? ? ? ? ? 3.064 ? ? metalc17 metalc ? ? G CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 504 A HOH 708 1_555 ? ? ? ? ? ? ? 3.013 ? ? metalc18 metalc ? ? G CA . CA ? ? ? 1_555 B DC 6 OP1 ? ? A CA 504 P DC 6 1_555 ? ? ? ? ? ? ? 2.896 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 9 N3 ? ? P DA 1 T DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 9 O4 ? ? P DA 1 T DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 8 N3 ? ? P DG 2 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 8 O2 ? ? P DG 2 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 8 N4 ? ? P DG 2 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 7 N3 ? ? P DG 3 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 7 O2 ? ? P DG 3 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 7 N4 ? ? P DG 3 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 6 N3 ? ? P DA 4 T DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 6 O4 ? ? P DA 4 T DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 5 N1 ? ? P DC 5 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 5 O6 ? ? P DC 5 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 5 N2 ? ? P DC 5 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 4 N1 ? ? P DC 6 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 4 O6 ? ? P DC 6 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 4 N2 ? ? P DC 6 T DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DOC 7 N3 ? ? ? 1_555 C DG 3 N1 ? ? P DOC 7 T DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DOC 7 N4 ? ? ? 1_555 C DG 3 O6 ? ? P DOC 7 T DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DOC 7 O2 ? ? ? 1_555 C DG 3 N2 ? ? P DOC 7 T DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 214 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 214 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 215 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 215 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -9.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 120 ? LEU A 123 ? VAL A 120 LEU A 123 A 2 GLU A 127 ? ASP A 131 ? GLU A 127 ASP A 131 A 3 ILE A 30 ? LEU A 35 ? ILE A 30 LEU A 35 A 4 GLY A 195 ? ALA A 200 ? GLY A 195 ALA A 200 A 5 GLN A 218 ? VAL A 220 ? GLN A 218 VAL A 220 A 6 HIS A 156 ? VAL A 157 ? HIS A 156 VAL A 157 B 1 MET A 79 ? ASN A 80 ? MET A 79 ASN A 80 B 2 LEU A 62 ? CYS A 66 ? LEU A 62 CYS A 66 B 3 LEU A 55 ? GLN A 59 ? LEU A 55 GLN A 59 B 4 VAL A 92 ? ASN A 95 ? VAL A 92 ASN A 95 C 1 PHE A 302 ? SER A 307 ? PHE A 302 SER A 307 C 2 LEU A 405 ? LEU A 413 ? LEU A 405 LEU A 413 C 3 PRO A 339 ? ARG A 347 ? PRO A 339 ARG A 347 C 4 ARG A 357 ? PRO A 363 ? ARG A 357 PRO A 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 121 ? N GLU A 121 O PHE A 129 ? O PHE A 129 A 2 3 O ASN A 128 ? O ASN A 128 N VAL A 33 ? N VAL A 33 A 3 4 N ASP A 34 ? N ASP A 34 O CYS A 196 ? O CYS A 196 A 4 5 N ALA A 197 ? N ALA A 197 O THR A 219 ? O THR A 219 A 5 6 O GLN A 218 ? O GLN A 218 N HIS A 156 ? N HIS A 156 B 1 2 O MET A 79 ? O MET A 79 N VAL A 63 ? N VAL A 63 B 2 3 O LEU A 62 ? O LEU A 62 N GLN A 59 ? N GLN A 59 B 3 4 N GLN A 58 ? N GLN A 58 O VAL A 94 ? O VAL A 94 C 1 2 N ASP A 306 ? N ASP A 306 O LEU A 406 ? O LEU A 406 C 2 3 O CYS A 409 ? O CYS A 409 N ARG A 343 ? N ARG A 343 C 3 4 N VAL A 342 ? N VAL A 342 O CYS A 362 ? O CYS A 362 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 0OJ 501 ? 24 'BINDING SITE FOR RESIDUE 0OJ A 501' AC2 Software A CA 502 ? 5 'BINDING SITE FOR RESIDUE CA A 502' AC3 Software A CA 503 ? 4 'BINDING SITE FOR RESIDUE CA A 503' AC4 Software A CA 504 ? 6 'BINDING SITE FOR RESIDUE CA A 504' AC5 Software A GOL 505 ? 8 'BINDING SITE FOR RESIDUE GOL A 505' AC6 Software A GOL 506 ? 7 'BINDING SITE FOR RESIDUE GOL A 506' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 LEU A 35 ? LEU A 35 . ? 1_555 ? 2 AC1 24 CYS A 37 ? CYS A 37 . ? 1_555 ? 3 AC1 24 PHE A 38 ? PHE A 38 . ? 1_555 ? 4 AC1 24 TYR A 39 ? TYR A 39 . ? 1_555 ? 5 AC1 24 VAL A 64 ? VAL A 64 . ? 1_555 ? 6 AC1 24 THR A 65 ? THR A 65 . ? 1_555 ? 7 AC1 24 TYR A 68 ? TYR A 68 . ? 1_555 ? 8 AC1 24 ARG A 71 ? ARG A 71 . ? 1_555 ? 9 AC1 24 LYS A 77 ? LYS A 77 . ? 1_555 ? 10 AC1 24 LEU A 78 ? LEU A 78 . ? 1_555 ? 11 AC1 24 ASP A 126 ? ASP A 126 . ? 1_555 ? 12 AC1 24 LYS A 214 ? LYS A 214 . ? 1_555 ? 13 AC1 24 CA F . ? CA A 503 . ? 1_555 ? 14 AC1 24 HOH J . ? HOH A 616 . ? 1_555 ? 15 AC1 24 HOH J . ? HOH A 650 . ? 1_555 ? 16 AC1 24 HOH J . ? HOH A 651 . ? 1_555 ? 17 AC1 24 HOH J . ? HOH A 652 . ? 1_555 ? 18 AC1 24 HOH J . ? HOH A 662 . ? 1_555 ? 19 AC1 24 HOH J . ? HOH A 722 . ? 1_555 ? 20 AC1 24 DOC B 7 ? DOC P 7 . ? 1_555 ? 21 AC1 24 HOH K . ? HOH P 101 . ? 1_555 ? 22 AC1 24 DT C 2 ? DT T 4 . ? 1_555 ? 23 AC1 24 DG C 3 ? DG T 5 . ? 1_555 ? 24 AC1 24 HOH L . ? HOH T 110 . ? 1_555 ? 25 AC2 5 ASP A 34 ? ASP A 34 . ? 1_555 ? 26 AC2 5 GLU A 127 ? GLU A 127 . ? 1_555 ? 27 AC2 5 HOH J . ? HOH A 651 . ? 1_555 ? 28 AC2 5 HOH J . ? HOH A 662 . ? 1_555 ? 29 AC2 5 HOH J . ? HOH A 707 . ? 1_555 ? 30 AC3 4 ASP A 34 ? ASP A 34 . ? 1_555 ? 31 AC3 4 LEU A 35 ? LEU A 35 . ? 1_555 ? 32 AC3 4 ASP A 126 ? ASP A 126 . ? 1_555 ? 33 AC3 4 0OJ D . ? 0OJ A 501 . ? 1_555 ? 34 AC4 6 LYS A 237 ? LYS A 237 . ? 1_555 ? 35 AC4 6 ILE A 239 ? ILE A 239 . ? 1_555 ? 36 AC4 6 ILE A 242 ? ILE A 242 . ? 1_555 ? 37 AC4 6 HOH J . ? HOH A 702 . ? 1_555 ? 38 AC4 6 HOH J . ? HOH A 708 . ? 1_555 ? 39 AC4 6 DC B 6 ? DC P 6 . ? 1_555 ? 40 AC5 8 ASP A 98 ? ASP A 98 . ? 1_555 ? 41 AC5 8 GLU A 304 ? GLU A 304 . ? 1_555 ? 42 AC5 8 GLU A 305 ? GLU A 305 . ? 1_555 ? 43 AC5 8 HOH J . ? HOH A 611 . ? 1_555 ? 44 AC5 8 HOH J . ? HOH A 629 . ? 1_555 ? 45 AC5 8 HOH J . ? HOH A 701 . ? 1_555 ? 46 AC5 8 DG C 4 ? DG T 6 . ? 1_555 ? 47 AC5 8 HOH L . ? HOH T 103 . ? 1_555 ? 48 AC6 7 GLU A 305 ? GLU A 305 . ? 1_555 ? 49 AC6 7 ARG A 357 ? ARG A 357 . ? 1_555 ? 50 AC6 7 HOH J . ? HOH A 657 . ? 1_555 ? 51 AC6 7 HOH J . ? HOH A 658 . ? 1_555 ? 52 AC6 7 DG C 3 ? DG T 5 . ? 1_555 ? 53 AC6 7 DG C 4 ? DG T 6 . ? 1_555 ? 54 AC6 7 DG C 5 ? DG T 7 . ? 1_555 ? # _database_PDB_matrix.entry_id 4EBD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4EBD _atom_sites.fract_transf_matrix[1][1] 0.010227 _atom_sites.fract_transf_matrix[1][2] 0.005905 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011810 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004932 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 ALA 4 4 ? ? ? A . n A 1 5 ASP 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 GLY 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 ALA 9 9 ? ? ? A . n A 1 10 ALA 10 10 ? ? ? A . n A 1 11 SER 11 11 ? ? ? A . n A 1 12 SER 12 12 ? ? ? A . n A 1 13 GLN 13 13 ? ? ? A . n A 1 14 GLY 14 14 ? ? ? A . n A 1 15 VAL 15 15 ? ? ? A . n A 1 16 HIS 16 16 ? ? ? A . n A 1 17 ASP 17 17 ? ? ? A . n A 1 18 GLN 18 18 ? ? ? A . n A 1 19 VAL 19 19 ? ? ? A . n A 1 20 LEU 20 20 ? ? ? A . n A 1 21 PRO 21 21 ? ? ? A . n A 1 22 THR 22 22 ? ? ? A . n A 1 23 PRO 23 23 ? ? ? A . n A 1 24 ASN 24 24 ? ? ? A . n A 1 25 ALA 25 25 ? ? ? A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 MET 135 135 135 MET MET A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLN 141 141 141 GLN GLN A . n A 1 142 GLN 142 142 142 GLN GLN A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 HIS 170 170 170 HIS HIS A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 MET 183 183 183 MET MET A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 MET 187 187 187 MET MET A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 CYS 196 196 196 CYS CYS A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 PRO 223 223 223 PRO PRO A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 CYS 226 226 226 CYS CYS A . n A 1 227 GLN 227 227 227 GLN GLN A . n A 1 228 HIS 228 228 228 HIS HIS A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 HIS 231 231 231 HIS HIS A . n A 1 232 SER 232 232 232 SER SER A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 HIS 235 235 235 HIS HIS A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 GLU 238 238 238 GLU GLU A . n A 1 239 ILE 239 239 239 ILE ILE A . n A 1 240 PRO 240 240 240 PRO PRO A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 TYR 244 244 244 TYR TYR A . n A 1 245 LYS 245 245 245 LYS LYS A . n A 1 246 THR 246 246 246 THR THR A . n A 1 247 ALA 247 247 247 ALA ALA A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 CYS 249 249 249 CYS CYS A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 GLU 251 251 251 GLU GLU A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 ARG 259 259 259 ARG ARG A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 THR 263 263 263 THR THR A . n A 1 264 PHE 264 264 264 PHE PHE A . n A 1 265 SER 265 265 265 SER SER A . n A 1 266 PRO 266 266 266 PRO PRO A . n A 1 267 LYS 267 267 267 LYS LYS A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 LYS 271 271 271 LYS LYS A . n A 1 272 GLU 272 272 272 GLU GLU A . n A 1 273 LEU 273 273 273 LEU LEU A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 SER 276 276 276 SER SER A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 GLN 279 279 279 GLN GLN A . n A 1 280 ARG 280 280 280 ARG ARG A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 GLN 282 282 282 GLN GLN A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 SER 285 285 285 SER SER A . n A 1 286 PHE 286 286 286 PHE PHE A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 ASP 289 289 289 ASP ASP A . n A 1 290 ASN 290 290 290 ASN ASN A . n A 1 291 SER 291 291 291 SER SER A . n A 1 292 PRO 292 292 292 PRO PRO A . n A 1 293 VAL 293 293 293 VAL VAL A . n A 1 294 ILE 294 294 294 ILE ILE A . n A 1 295 LEU 295 295 295 LEU LEU A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 GLY 297 297 297 GLY GLY A . n A 1 298 PRO 298 298 298 PRO PRO A . n A 1 299 PRO 299 299 299 PRO PRO A . n A 1 300 GLN 300 300 300 GLN GLN A . n A 1 301 SER 301 301 301 SER SER A . n A 1 302 PHE 302 302 302 PHE PHE A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 GLU 304 304 304 GLU GLU A . n A 1 305 GLU 305 305 305 GLU GLU A . n A 1 306 ASP 306 306 306 ASP ASP A . n A 1 307 SER 307 307 307 SER SER A . n A 1 308 PHE 308 308 308 PHE PHE A . n A 1 309 LYS 309 309 309 LYS LYS A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 CYS 311 311 311 CYS CYS A . n A 1 312 SER 312 312 312 SER SER A . n A 1 313 SER 313 313 313 SER SER A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 VAL 315 315 315 VAL VAL A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 ALA 317 317 317 ALA ALA A . n A 1 318 LYS 318 318 318 LYS LYS A . n A 1 319 ASN 319 319 319 ASN ASN A . n A 1 320 LYS 320 320 320 LYS LYS A . n A 1 321 ILE 321 321 321 ILE ILE A . n A 1 322 GLU 322 322 322 GLU GLU A . n A 1 323 GLU 323 323 323 GLU GLU A . n A 1 324 LEU 324 324 324 LEU LEU A . n A 1 325 LEU 325 325 325 LEU LEU A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 SER 327 327 327 SER SER A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 LEU 329 329 329 LEU LEU A . n A 1 330 ASN 330 330 330 ASN ASN A . n A 1 331 ARG 331 331 331 ARG ARG A . n A 1 332 VAL 332 332 332 VAL VAL A . n A 1 333 CYS 333 333 333 CYS CYS A . n A 1 334 GLN 334 334 334 GLN GLN A . n A 1 335 ASP 335 335 335 ASP ASP A . n A 1 336 GLY 336 336 ? ? ? A . n A 1 337 ARG 337 337 337 ARG ARG A . n A 1 338 LYS 338 338 338 LYS LYS A . n A 1 339 PRO 339 339 339 PRO PRO A . n A 1 340 HIS 340 340 340 HIS HIS A . n A 1 341 THR 341 341 341 THR THR A . n A 1 342 VAL 342 342 342 VAL VAL A . n A 1 343 ARG 343 343 343 ARG ARG A . n A 1 344 LEU 344 344 344 LEU LEU A . n A 1 345 ILE 345 345 345 ILE ILE A . n A 1 346 ILE 346 346 346 ILE ILE A . n A 1 347 ARG 347 347 347 ARG ARG A . n A 1 348 ARG 348 348 348 ARG ARG A . n A 1 349 TYR 349 349 349 TYR TYR A . n A 1 350 SER 350 350 ? ? ? A . n A 1 351 SER 351 351 ? ? ? A . n A 1 352 GLU 352 352 ? ? ? A . n A 1 353 LYS 353 353 ? ? ? A . n A 1 354 HIS 354 354 ? ? ? A . n A 1 355 TYR 355 355 ? ? ? A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 ARG 357 357 357 ARG ARG A . n A 1 358 GLU 358 358 358 GLU GLU A . n A 1 359 SER 359 359 359 SER SER A . n A 1 360 ARG 360 360 360 ARG ARG A . n A 1 361 GLN 361 361 361 GLN GLN A . n A 1 362 CYS 362 362 362 CYS CYS A . n A 1 363 PRO 363 363 363 PRO PRO A . n A 1 364 ILE 364 364 364 ILE ILE A . n A 1 365 PRO 365 365 365 PRO PRO A . n A 1 366 SER 366 366 366 SER SER A . n A 1 367 HIS 367 367 367 HIS HIS A . n A 1 368 VAL 368 368 368 VAL VAL A . n A 1 369 ILE 369 369 369 ILE ILE A . n A 1 370 GLN 370 370 370 GLN GLN A . n A 1 371 LYS 371 371 371 LYS LYS A . n A 1 372 LEU 372 372 ? ? ? A . n A 1 373 GLY 373 373 ? ? ? A . n A 1 374 THR 374 374 ? ? ? A . n A 1 375 GLY 375 375 ? ? ? A . n A 1 376 ASN 376 376 ? ? ? A . n A 1 377 TYR 377 377 ? ? ? A . n A 1 378 ASP 378 378 378 ASP ASP A . n A 1 379 VAL 379 379 379 VAL VAL A . n A 1 380 MET 380 380 380 MET MET A . n A 1 381 THR 381 381 381 THR THR A . n A 1 382 PRO 382 382 382 PRO PRO A . n A 1 383 MET 383 383 383 MET MET A . n A 1 384 VAL 384 384 384 VAL VAL A . n A 1 385 ASP 385 385 385 ASP ASP A . n A 1 386 ILE 386 386 386 ILE ILE A . n A 1 387 LEU 387 387 387 LEU LEU A . n A 1 388 MET 388 388 388 MET MET A . n A 1 389 LYS 389 389 389 LYS LYS A . n A 1 390 LEU 390 390 390 LEU LEU A . n A 1 391 PHE 391 391 391 PHE PHE A . n A 1 392 ARG 392 392 392 ARG ARG A . n A 1 393 ASN 393 393 393 ASN ASN A . n A 1 394 MET 394 394 394 MET MET A . n A 1 395 VAL 395 395 395 VAL VAL A . n A 1 396 ASN 396 396 396 ASN ASN A . n A 1 397 VAL 397 397 397 VAL VAL A . n A 1 398 LYS 398 398 398 LYS LYS A . n A 1 399 MET 399 399 399 MET MET A . n A 1 400 PRO 400 400 400 PRO PRO A . n A 1 401 PHE 401 401 401 PHE PHE A . n A 1 402 HIS 402 402 402 HIS HIS A . n A 1 403 LEU 403 403 403 LEU LEU A . n A 1 404 THR 404 404 404 THR THR A . n A 1 405 LEU 405 405 405 LEU LEU A . n A 1 406 LEU 406 406 406 LEU LEU A . n A 1 407 SER 407 407 407 SER SER A . n A 1 408 VAL 408 408 408 VAL VAL A . n A 1 409 CYS 409 409 409 CYS CYS A . n A 1 410 PHE 410 410 410 PHE PHE A . n A 1 411 CYS 411 411 411 CYS CYS A . n A 1 412 ASN 412 412 412 ASN ASN A . n A 1 413 LEU 413 413 413 LEU LEU A . n A 1 414 LYS 414 414 414 LYS LYS A . n A 1 415 ALA 415 415 ? ? ? A . n A 1 416 LEU 416 416 ? ? ? A . n A 1 417 ASN 417 417 ? ? ? A . n A 1 418 THR 418 418 ? ? ? A . n A 1 419 ALA 419 419 ? ? ? A . n A 1 420 LYS 420 420 ? ? ? A . n B 2 1 DA 1 1 1 DA DA P . n B 2 2 DG 2 2 2 DG DG P . n B 2 3 DG 3 3 3 DG DG P . n B 2 4 DA 4 4 4 DA DA P . n B 2 5 DC 5 5 5 DC DC P . n B 2 6 DC 6 6 6 DC DC P . n B 2 7 DOC 7 7 7 DOC DOC P . n C 3 1 DC 1 3 3 DC DC T . n C 3 2 DT 2 4 4 DT DT T . n C 3 3 DG 3 5 5 DG DG T . n C 3 4 DG 4 6 6 DG DG T . n C 3 5 DG 5 7 7 DG DG T . n C 3 6 DT 6 8 8 DT DT T . n C 3 7 DC 7 9 9 DC DC T . n C 3 8 DC 8 10 10 DC DC T . n C 3 9 DT 9 11 11 DT DT T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 0OJ 1 501 501 0OJ 0OJ A . E 5 CA 1 502 502 CA CA A . F 5 CA 1 503 503 CA CA A . G 5 CA 1 504 504 CA CA A . H 6 GOL 1 505 505 GOL GOL A . I 6 GOL 1 506 506 GOL GOL A . J 7 HOH 1 601 601 HOH HOH A . J 7 HOH 2 602 602 HOH HOH A . J 7 HOH 3 603 603 HOH HOH A . J 7 HOH 4 604 604 HOH HOH A . J 7 HOH 5 605 605 HOH HOH A . J 7 HOH 6 606 606 HOH HOH A . J 7 HOH 7 607 607 HOH HOH A . J 7 HOH 8 608 608 HOH HOH A . J 7 HOH 9 609 609 HOH HOH A . J 7 HOH 10 610 610 HOH HOH A . J 7 HOH 11 611 611 HOH HOH A . J 7 HOH 12 612 612 HOH HOH A . J 7 HOH 13 613 613 HOH HOH A . J 7 HOH 14 614 614 HOH HOH A . J 7 HOH 15 615 615 HOH HOH A . J 7 HOH 16 616 616 HOH HOH A . J 7 HOH 17 617 617 HOH HOH A . J 7 HOH 18 618 618 HOH HOH A . J 7 HOH 19 619 619 HOH HOH A . J 7 HOH 20 620 620 HOH HOH A . J 7 HOH 21 621 621 HOH HOH A . J 7 HOH 22 622 622 HOH HOH A . J 7 HOH 23 623 623 HOH HOH A . J 7 HOH 24 624 624 HOH HOH A . J 7 HOH 25 625 625 HOH HOH A . J 7 HOH 26 626 626 HOH HOH A . J 7 HOH 27 627 627 HOH HOH A . J 7 HOH 28 628 628 HOH HOH A . J 7 HOH 29 629 629 HOH HOH A . J 7 HOH 30 630 630 HOH HOH A . J 7 HOH 31 631 631 HOH HOH A . J 7 HOH 32 632 632 HOH HOH A . J 7 HOH 33 633 633 HOH HOH A . J 7 HOH 34 634 634 HOH HOH A . J 7 HOH 35 635 635 HOH HOH A . J 7 HOH 36 636 636 HOH HOH A . J 7 HOH 37 637 637 HOH HOH A . J 7 HOH 38 638 638 HOH HOH A . J 7 HOH 39 639 639 HOH HOH A . J 7 HOH 40 640 640 HOH HOH A . J 7 HOH 41 641 641 HOH HOH A . J 7 HOH 42 642 642 HOH HOH A . J 7 HOH 43 643 643 HOH HOH A . J 7 HOH 44 644 644 HOH HOH A . J 7 HOH 45 645 645 HOH HOH A . J 7 HOH 46 646 646 HOH HOH A . J 7 HOH 47 647 647 HOH HOH A . J 7 HOH 48 648 648 HOH HOH A . J 7 HOH 49 649 649 HOH HOH A . J 7 HOH 50 650 650 HOH HOH A . J 7 HOH 51 651 651 HOH HOH A . J 7 HOH 52 652 652 HOH HOH A . J 7 HOH 53 653 653 HOH HOH A . J 7 HOH 54 654 654 HOH HOH A . J 7 HOH 55 655 655 HOH HOH A . J 7 HOH 56 656 656 HOH HOH A . J 7 HOH 57 657 657 HOH HOH A . J 7 HOH 58 658 658 HOH HOH A . J 7 HOH 59 659 659 HOH HOH A . J 7 HOH 60 660 660 HOH HOH A . J 7 HOH 61 661 661 HOH HOH A . J 7 HOH 62 662 662 HOH HOH A . J 7 HOH 63 663 663 HOH HOH A . J 7 HOH 64 664 664 HOH HOH A . J 7 HOH 65 665 665 HOH HOH A . J 7 HOH 66 666 666 HOH HOH A . J 7 HOH 67 667 667 HOH HOH A . J 7 HOH 68 668 668 HOH HOH A . J 7 HOH 69 669 669 HOH HOH A . J 7 HOH 70 670 671 HOH HOH A . J 7 HOH 71 671 672 HOH HOH A . J 7 HOH 72 672 673 HOH HOH A . J 7 HOH 73 673 674 HOH HOH A . J 7 HOH 74 674 675 HOH HOH A . J 7 HOH 75 675 676 HOH HOH A . J 7 HOH 76 676 677 HOH HOH A . J 7 HOH 77 677 678 HOH HOH A . J 7 HOH 78 678 679 HOH HOH A . J 7 HOH 79 679 680 HOH HOH A . J 7 HOH 80 680 681 HOH HOH A . J 7 HOH 81 681 682 HOH HOH A . J 7 HOH 82 682 683 HOH HOH A . J 7 HOH 83 683 684 HOH HOH A . J 7 HOH 84 684 685 HOH HOH A . J 7 HOH 85 685 686 HOH HOH A . J 7 HOH 86 686 687 HOH HOH A . J 7 HOH 87 687 688 HOH HOH A . J 7 HOH 88 688 689 HOH HOH A . J 7 HOH 89 689 690 HOH HOH A . J 7 HOH 90 690 691 HOH HOH A . J 7 HOH 91 691 692 HOH HOH A . J 7 HOH 92 692 693 HOH HOH A . J 7 HOH 93 693 694 HOH HOH A . J 7 HOH 94 694 695 HOH HOH A . J 7 HOH 95 695 696 HOH HOH A . J 7 HOH 96 696 697 HOH HOH A . J 7 HOH 97 697 698 HOH HOH A . J 7 HOH 98 698 699 HOH HOH A . J 7 HOH 99 699 700 HOH HOH A . J 7 HOH 100 700 701 HOH HOH A . J 7 HOH 101 701 702 HOH HOH A . J 7 HOH 102 702 703 HOH HOH A . J 7 HOH 103 703 704 HOH HOH A . J 7 HOH 104 704 705 HOH HOH A . J 7 HOH 105 705 706 HOH HOH A . J 7 HOH 106 706 707 HOH HOH A . J 7 HOH 107 707 708 HOH HOH A . J 7 HOH 108 708 709 HOH HOH A . J 7 HOH 109 709 710 HOH HOH A . J 7 HOH 110 710 711 HOH HOH A . J 7 HOH 111 711 712 HOH HOH A . J 7 HOH 112 712 713 HOH HOH A . J 7 HOH 113 713 714 HOH HOH A . J 7 HOH 114 714 715 HOH HOH A . J 7 HOH 115 715 716 HOH HOH A . J 7 HOH 116 716 717 HOH HOH A . J 7 HOH 117 717 718 HOH HOH A . J 7 HOH 118 718 719 HOH HOH A . J 7 HOH 119 719 720 HOH HOH A . J 7 HOH 120 720 721 HOH HOH A . J 7 HOH 121 721 722 HOH HOH A . J 7 HOH 122 722 723 HOH HOH A . K 7 HOH 1 101 724 HOH HOH P . K 7 HOH 2 102 101 HOH HOH P . K 7 HOH 3 103 102 HOH HOH P . K 7 HOH 4 104 103 HOH HOH P . K 7 HOH 5 105 104 HOH HOH P . K 7 HOH 6 106 105 HOH HOH P . K 7 HOH 7 107 101 HOH HOH P . L 7 HOH 1 101 670 HOH HOH T . L 7 HOH 2 102 725 HOH HOH T . L 7 HOH 3 103 726 HOH HOH T . L 7 HOH 4 104 102 HOH HOH T . L 7 HOH 5 105 103 HOH HOH T . L 7 HOH 6 106 104 HOH HOH T . L 7 HOH 7 107 105 HOH HOH T . L 7 HOH 8 108 106 HOH HOH T . L 7 HOH 9 109 107 HOH HOH T . L 7 HOH 10 110 108 HOH HOH T . L 7 HOH 11 111 109 HOH HOH T . L 7 HOH 12 112 110 HOH HOH T . L 7 HOH 13 113 111 HOH HOH T . L 7 HOH 14 114 112 HOH HOH T . L 7 HOH 15 115 113 HOH HOH T . L 7 HOH 16 116 114 HOH HOH T . L 7 HOH 17 117 115 HOH HOH T . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id DOC _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id DOC _pdbx_struct_mod_residue.auth_seq_id 7 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4960 ? 1 MORE -63 ? 1 'SSA (A^2)' 19310 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 677 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 90.2 ? 2 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 651 ? 1_555 168.9 ? 3 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 651 ? 1_555 100.3 ? 4 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 662 ? 1_555 83.1 ? 5 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 662 ? 1_555 161.3 ? 6 O ? J HOH . ? A HOH 651 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 662 ? 1_555 88.0 ? 7 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 707 ? 1_555 59.3 ? 8 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 707 ? 1_555 112.9 ? 9 O ? J HOH . ? A HOH 651 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 707 ? 1_555 112.5 ? 10 O ? J HOH . ? A HOH 662 ? 1_555 CA ? E CA . ? A CA 502 ? 1_555 O ? J HOH . ? A HOH 707 ? 1_555 78.4 ? 11 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 O ? A LEU 35 ? A LEU 35 ? 1_555 93.3 ? 12 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAF ? D 0OJ . ? A 0OJ 501 ? 1_555 111.0 ? 13 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAF ? D 0OJ . ? A 0OJ 501 ? 1_555 77.0 ? 14 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAI ? D 0OJ . ? A 0OJ 501 ? 1_555 169.5 ? 15 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAI ? D 0OJ . ? A 0OJ 501 ? 1_555 79.8 ? 16 OAF ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAI ? D 0OJ . ? A 0OJ 501 ? 1_555 75.2 ? 17 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAC ? D 0OJ . ? A 0OJ 501 ? 1_555 110.1 ? 18 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAC ? D 0OJ . ? A 0OJ 501 ? 1_555 150.4 ? 19 OAF ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAC ? D 0OJ . ? A 0OJ 501 ? 1_555 109.4 ? 20 OAI ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAC ? D 0OJ . ? A 0OJ 501 ? 1_555 74.4 ? 21 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAT ? D 0OJ . ? A 0OJ 501 ? 1_555 140.2 ? 22 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAT ? D 0OJ . ? A 0OJ 501 ? 1_555 122.0 ? 23 OAF ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAT ? D 0OJ . ? A 0OJ 501 ? 1_555 65.4 ? 24 OAI ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAT ? D 0OJ . ? A 0OJ 501 ? 1_555 49.7 ? 25 OAC ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 OAT ? D 0OJ . ? A 0OJ 501 ? 1_555 46.4 ? 26 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 O ? J HOH . ? A HOH 722 ? 1_555 62.0 ? 27 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 O ? J HOH . ? A HOH 722 ? 1_555 72.1 ? 28 OAF ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 O ? J HOH . ? A HOH 722 ? 1_555 49.9 ? 29 OAI ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 O ? J HOH . ? A HOH 722 ? 1_555 122.1 ? 30 OAC ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 O ? J HOH . ? A HOH 722 ? 1_555 134.7 ? 31 OAT ? D 0OJ . ? A 0OJ 501 ? 1_555 CA ? F CA . ? A CA 503 ? 1_555 O ? J HOH . ? A HOH 722 ? 1_555 108.7 ? 32 O ? A LYS 237 ? A LYS 237 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? A ILE 239 ? A ILE 239 ? 1_555 87.1 ? 33 O ? A LYS 237 ? A LYS 237 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? A ILE 242 ? A ILE 242 ? 1_555 77.4 ? 34 O ? A ILE 239 ? A ILE 239 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? A ILE 242 ? A ILE 242 ? 1_555 69.2 ? 35 O ? A LYS 237 ? A LYS 237 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? J HOH . ? A HOH 702 ? 1_555 100.2 ? 36 O ? A ILE 239 ? A ILE 239 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? J HOH . ? A HOH 702 ? 1_555 112.1 ? 37 O ? A ILE 242 ? A ILE 242 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? J HOH . ? A HOH 702 ? 1_555 177.3 ? 38 O ? A LYS 237 ? A LYS 237 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? J HOH . ? A HOH 708 ? 1_555 71.7 ? 39 O ? A ILE 239 ? A ILE 239 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? J HOH . ? A HOH 708 ? 1_555 140.3 ? 40 O ? A ILE 242 ? A ILE 242 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? J HOH . ? A HOH 708 ? 1_555 133.5 ? 41 O ? J HOH . ? A HOH 702 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 O ? J HOH . ? A HOH 708 ? 1_555 44.0 ? 42 O ? A LYS 237 ? A LYS 237 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 OP1 ? B DC 6 ? P DC 6 ? 1_555 156.4 ? 43 O ? A ILE 239 ? A ILE 239 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 OP1 ? B DC 6 ? P DC 6 ? 1_555 83.9 ? 44 O ? A ILE 242 ? A ILE 242 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 OP1 ? B DC 6 ? P DC 6 ? 1_555 79.0 ? 45 O ? J HOH . ? A HOH 702 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 OP1 ? B DC 6 ? P DC 6 ? 1_555 103.4 ? 46 O ? J HOH . ? A HOH 708 ? 1_555 CA ? G CA . ? A CA 504 ? 1_555 OP1 ? B DC 6 ? P DC 6 ? 1_555 127.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-13 2 'Structure model' 1 1 2012-07-11 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_struct_conn_angle 8 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 23 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 37 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -1.7498 16.6301 21.2738 0.3865 0.2868 0.3520 -0.1487 0.0683 -0.0390 0.1037 0.2666 0.6204 -0.1634 -0.0741 0.0286 -0.1015 0.1673 0.0029 0.0677 0.0213 0.2821 0.5600 -0.1717 -0.0151 'X-RAY DIFFRACTION' 2 ? refined 11.2927 22.6029 2.9596 0.2197 0.1851 0.1739 -0.0012 -0.0347 0.0018 0.6721 0.6048 1.1654 0.6409 0.2418 0.1179 -0.0370 -0.0331 0.0306 -0.1145 -0.0313 0.0166 0.0891 0.1379 -0.0312 'X-RAY DIFFRACTION' 3 ? refined 7.2556 41.0486 31.6550 0.5346 0.3730 0.4097 -0.2042 0.1229 -0.1275 0.6897 0.9812 0.6669 0.3058 -0.0138 -0.1956 0.2715 -0.3375 0.2406 0.3378 -0.0860 0.2201 -0.5437 0.3833 0.0465 'X-RAY DIFFRACTION' 4 ? refined 3.7487 40.9610 15.3276 0.5142 0.3311 0.6058 -0.1345 0.0393 -0.0728 -0.0045 0.0032 0.0411 0.0001 -0.0014 0.0133 0.0986 0.0118 0.0570 0.1512 -0.2748 0.2847 -0.3442 0.2839 -0.0009 'X-RAY DIFFRACTION' 5 ? refined 5.0689 36.2413 20.0059 0.4305 0.3827 0.4127 -0.1637 0.0019 -0.0431 0.0102 0.0573 0.1786 -0.0270 0.0431 -0.0649 -0.1345 -0.0992 0.3753 -0.1858 -0.0293 0.3936 -0.4542 -0.1138 -0.0016 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 26:99) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 100:286) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 287:414) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'P' and (resseq 1:7) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'T' and (resseq 3:11) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OP2 _pdbx_validate_close_contact.auth_asym_id_1 T _pdbx_validate_close_contact.auth_comp_id_1 DG _pdbx_validate_close_contact.auth_seq_id_1 6 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GOL _pdbx_validate_close_contact.auth_seq_id_2 505 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C1'" P DG 2 ? ? "O4'" P DG 2 ? ? "C4'" P DG 2 ? ? 103.57 110.10 -6.53 1.00 N 2 1 "O4'" P DG 2 ? ? "C1'" P DG 2 ? ? N9 P DG 2 ? ? 110.26 108.30 1.96 0.30 N 3 1 "O4'" P DA 4 ? ? "C1'" P DA 4 ? ? N9 P DA 4 ? ? 111.34 108.30 3.04 0.30 N 4 1 "O4'" P DC 5 ? ? "C4'" P DC 5 ? ? "C3'" P DC 5 ? ? 100.98 104.50 -3.52 0.40 N 5 1 "O4'" T DC 3 ? ? "C1'" T DC 3 ? ? N1 T DC 3 ? ? 113.51 108.30 5.21 0.30 N 6 1 "O4'" T DG 5 ? ? "C1'" T DG 5 ? ? N9 T DG 5 ? ? 114.49 108.30 6.19 0.30 N 7 1 "O4'" T DT 11 ? ? "C4'" T DT 11 ? ? "C3'" T DT 11 ? ? 98.91 104.50 -5.59 0.40 N 8 1 "C5'" T DT 11 ? ? "C4'" T DT 11 ? ? "O4'" T DT 11 ? ? 117.44 109.80 7.64 1.10 N 9 1 "C3'" T DT 11 ? ? "C2'" T DT 11 ? ? "C1'" T DT 11 ? ? 93.84 102.40 -8.56 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 37 ? ? 24.91 63.34 2 1 ASP A 52 ? ? 75.95 -22.15 3 1 LYS A 60 ? ? 49.79 -123.10 4 1 GLU A 69 ? ? -52.76 -2.33 5 1 GLU A 86 ? ? -69.89 14.21 6 1 LYS A 87 ? ? -141.54 -11.04 7 1 CYS A 88 ? ? -170.69 90.20 8 1 CYS A 311 ? ? -162.16 99.12 9 1 CYS A 333 ? ? -67.17 -120.19 10 1 GLN A 334 ? ? 52.57 -128.33 11 1 ILE A 369 ? ? -77.20 36.40 12 1 VAL A 379 ? ? -152.35 -18.94 13 1 CYS A 411 ? ? -127.78 -157.00 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 259 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.089 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 0 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id LYS _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 310 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id CE _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id LYS _pdbx_unobs_or_zero_occ_atoms.label_seq_id 310 _pdbx_unobs_or_zero_occ_atoms.label_atom_id CE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A ALA 4 ? A ALA 4 5 1 Y 1 A ASP 5 ? A ASP 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A GLY 7 ? A GLY 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A ALA 9 ? A ALA 9 10 1 Y 1 A ALA 10 ? A ALA 10 11 1 Y 1 A SER 11 ? A SER 11 12 1 Y 1 A SER 12 ? A SER 12 13 1 Y 1 A GLN 13 ? A GLN 13 14 1 Y 1 A GLY 14 ? A GLY 14 15 1 Y 1 A VAL 15 ? A VAL 15 16 1 Y 1 A HIS 16 ? A HIS 16 17 1 Y 1 A ASP 17 ? A ASP 17 18 1 Y 1 A GLN 18 ? A GLN 18 19 1 Y 1 A VAL 19 ? A VAL 19 20 1 Y 1 A LEU 20 ? A LEU 20 21 1 Y 1 A PRO 21 ? A PRO 21 22 1 Y 1 A THR 22 ? A THR 22 23 1 Y 1 A PRO 23 ? A PRO 23 24 1 Y 1 A ASN 24 ? A ASN 24 25 1 Y 1 A ALA 25 ? A ALA 25 26 1 Y 1 A GLY 336 ? A GLY 336 27 1 Y 1 A SER 350 ? A SER 350 28 1 Y 1 A SER 351 ? A SER 351 29 1 Y 1 A GLU 352 ? A GLU 352 30 1 Y 1 A LYS 353 ? A LYS 353 31 1 Y 1 A HIS 354 ? A HIS 354 32 1 Y 1 A TYR 355 ? A TYR 355 33 1 Y 1 A LEU 372 ? A LEU 372 34 1 Y 1 A GLY 373 ? A GLY 373 35 1 Y 1 A THR 374 ? A THR 374 36 1 Y 1 A GLY 375 ? A GLY 375 37 1 Y 1 A ASN 376 ? A ASN 376 38 1 Y 1 A TYR 377 ? A TYR 377 39 1 Y 1 A ALA 415 ? A ALA 415 40 1 Y 1 A LEU 416 ? A LEU 416 41 1 Y 1 A ASN 417 ? A ASN 417 42 1 Y 1 A THR 418 ? A THR 418 43 1 Y 1 A ALA 419 ? A ALA 419 44 1 Y 1 A LYS 420 ? A LYS 420 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0OJ OAF O N N 1 0OJ PBC P N N 2 0OJ OAG O N N 3 0OJ OAB O N N 4 0OJ OAS O N N 5 0OJ PBE P N N 6 0OJ OAI O N N 7 0OJ OAD O N N 8 0OJ OAT O N N 9 0OJ PBD P N N 10 0OJ OAH O N N 11 0OJ OAC O N N 12 0OJ OAR O N N 13 0OJ CAL C N N 14 0OJ CAY C N R 15 0OJ CAZ C N S 16 0OJ CAN C N N 17 0OJ CAX C N S 18 0OJ OAE O N N 19 0OJ CAM C N N 20 0OJ CBB C N S 21 0OJ N9 N Y N 22 0OJ C8 C Y N 23 0OJ N7 N Y N 24 0OJ C5 C Y N 25 0OJ C4 C Y N 26 0OJ N3 N Y N 27 0OJ C2 C Y N 28 0OJ N1 N Y N 29 0OJ C6 C Y N 30 0OJ N6 N N N 31 0OJ H1 H N N 32 0OJ H2 H N N 33 0OJ H3 H N N 34 0OJ H4 H N N 35 0OJ H5 H N N 36 0OJ H6 H N N 37 0OJ H7 H N N 38 0OJ H8 H N N 39 0OJ H9 H N N 40 0OJ H10 H N N 41 0OJ H11 H N N 42 0OJ H12 H N N 43 0OJ H13 H N N 44 0OJ H14 H N N 45 0OJ H15 H N N 46 0OJ H16 H N N 47 0OJ H17 H N N 48 0OJ H18 H N N 49 ALA N N N N 50 ALA CA C N S 51 ALA C C N N 52 ALA O O N N 53 ALA CB C N N 54 ALA OXT O N N 55 ALA H H N N 56 ALA H2 H N N 57 ALA HA H N N 58 ALA HB1 H N N 59 ALA HB2 H N N 60 ALA HB3 H N N 61 ALA HXT H N N 62 ARG N N N N 63 ARG CA C N S 64 ARG C C N N 65 ARG O O N N 66 ARG CB C N N 67 ARG CG C N N 68 ARG CD C N N 69 ARG NE N N N 70 ARG CZ C N N 71 ARG NH1 N N N 72 ARG NH2 N N N 73 ARG OXT O N N 74 ARG H H N N 75 ARG H2 H N N 76 ARG HA H N N 77 ARG HB2 H N N 78 ARG HB3 H N N 79 ARG HG2 H N N 80 ARG HG3 H N N 81 ARG HD2 H N N 82 ARG HD3 H N N 83 ARG HE H N N 84 ARG HH11 H N N 85 ARG HH12 H N N 86 ARG HH21 H N N 87 ARG HH22 H N N 88 ARG HXT H N N 89 ASN N N N N 90 ASN CA C N S 91 ASN C C N N 92 ASN O O N N 93 ASN CB C N N 94 ASN CG C N N 95 ASN OD1 O N N 96 ASN ND2 N N N 97 ASN OXT O N N 98 ASN H H N N 99 ASN H2 H N N 100 ASN HA H N N 101 ASN HB2 H N N 102 ASN HB3 H N N 103 ASN HD21 H N N 104 ASN HD22 H N N 105 ASN HXT H N N 106 ASP N N N N 107 ASP CA C N S 108 ASP C C N N 109 ASP O O N N 110 ASP CB C N N 111 ASP CG C N N 112 ASP OD1 O N N 113 ASP OD2 O N N 114 ASP OXT O N N 115 ASP H H N N 116 ASP H2 H N N 117 ASP HA H N N 118 ASP HB2 H N N 119 ASP HB3 H N N 120 ASP HD2 H N N 121 ASP HXT H N N 122 CA CA CA N N 123 CYS N N N N 124 CYS CA C N R 125 CYS C C N N 126 CYS O O N N 127 CYS CB C N N 128 CYS SG S N N 129 CYS OXT O N N 130 CYS H H N N 131 CYS H2 H N N 132 CYS HA H N N 133 CYS HB2 H N N 134 CYS HB3 H N N 135 CYS HG H N N 136 CYS HXT H N N 137 DA OP3 O N N 138 DA P P N N 139 DA OP1 O N N 140 DA OP2 O N N 141 DA "O5'" O N N 142 DA "C5'" C N N 143 DA "C4'" C N R 144 DA "O4'" O N N 145 DA "C3'" C N S 146 DA "O3'" O N N 147 DA "C2'" C N N 148 DA "C1'" C N R 149 DA N9 N Y N 150 DA C8 C Y N 151 DA N7 N Y N 152 DA C5 C Y N 153 DA C6 C Y N 154 DA N6 N N N 155 DA N1 N Y N 156 DA C2 C Y N 157 DA N3 N Y N 158 DA C4 C Y N 159 DA HOP3 H N N 160 DA HOP2 H N N 161 DA "H5'" H N N 162 DA "H5''" H N N 163 DA "H4'" H N N 164 DA "H3'" H N N 165 DA "HO3'" H N N 166 DA "H2'" H N N 167 DA "H2''" H N N 168 DA "H1'" H N N 169 DA H8 H N N 170 DA H61 H N N 171 DA H62 H N N 172 DA H2 H N N 173 DC OP3 O N N 174 DC P P N N 175 DC OP1 O N N 176 DC OP2 O N N 177 DC "O5'" O N N 178 DC "C5'" C N N 179 DC "C4'" C N R 180 DC "O4'" O N N 181 DC "C3'" C N S 182 DC "O3'" O N N 183 DC "C2'" C N N 184 DC "C1'" C N R 185 DC N1 N N N 186 DC C2 C N N 187 DC O2 O N N 188 DC N3 N N N 189 DC C4 C N N 190 DC N4 N N N 191 DC C5 C N N 192 DC C6 C N N 193 DC HOP3 H N N 194 DC HOP2 H N N 195 DC "H5'" H N N 196 DC "H5''" H N N 197 DC "H4'" H N N 198 DC "H3'" H N N 199 DC "HO3'" H N N 200 DC "H2'" H N N 201 DC "H2''" H N N 202 DC "H1'" H N N 203 DC H41 H N N 204 DC H42 H N N 205 DC H5 H N N 206 DC H6 H N N 207 DG OP3 O N N 208 DG P P N N 209 DG OP1 O N N 210 DG OP2 O N N 211 DG "O5'" O N N 212 DG "C5'" C N N 213 DG "C4'" C N R 214 DG "O4'" O N N 215 DG "C3'" C N S 216 DG "O3'" O N N 217 DG "C2'" C N N 218 DG "C1'" C N R 219 DG N9 N Y N 220 DG C8 C Y N 221 DG N7 N Y N 222 DG C5 C Y N 223 DG C6 C N N 224 DG O6 O N N 225 DG N1 N N N 226 DG C2 C N N 227 DG N2 N N N 228 DG N3 N N N 229 DG C4 C Y N 230 DG HOP3 H N N 231 DG HOP2 H N N 232 DG "H5'" H N N 233 DG "H5''" H N N 234 DG "H4'" H N N 235 DG "H3'" H N N 236 DG "HO3'" H N N 237 DG "H2'" H N N 238 DG "H2''" H N N 239 DG "H1'" H N N 240 DG H8 H N N 241 DG H1 H N N 242 DG H21 H N N 243 DG H22 H N N 244 DOC N1 N N N 245 DOC C2 C N N 246 DOC N3 N N N 247 DOC C4 C N N 248 DOC C5 C N N 249 DOC C6 C N N 250 DOC O2 O N N 251 DOC N4 N N N 252 DOC "C1'" C N R 253 DOC "C2'" C N N 254 DOC "C3'" C N N 255 DOC "C4'" C N S 256 DOC "O4'" O N N 257 DOC "C5'" C N N 258 DOC "O5'" O N N 259 DOC P P N N 260 DOC OP1 O N N 261 DOC OP2 O N N 262 DOC OP3 O N N 263 DOC H5 H N N 264 DOC H6 H N N 265 DOC HN41 H N N 266 DOC HN42 H N N 267 DOC "H1'" H N N 268 DOC "H2'" H N N 269 DOC "H2''" H N N 270 DOC "H3'1" H N N 271 DOC "H3'2" H N N 272 DOC "H4'" H N N 273 DOC "H5'" H N N 274 DOC "H5''" H N N 275 DOC HOP2 H N N 276 DOC HOP3 H N N 277 DT OP3 O N N 278 DT P P N N 279 DT OP1 O N N 280 DT OP2 O N N 281 DT "O5'" O N N 282 DT "C5'" C N N 283 DT "C4'" C N R 284 DT "O4'" O N N 285 DT "C3'" C N S 286 DT "O3'" O N N 287 DT "C2'" C N N 288 DT "C1'" C N R 289 DT N1 N N N 290 DT C2 C N N 291 DT O2 O N N 292 DT N3 N N N 293 DT C4 C N N 294 DT O4 O N N 295 DT C5 C N N 296 DT C7 C N N 297 DT C6 C N N 298 DT HOP3 H N N 299 DT HOP2 H N N 300 DT "H5'" H N N 301 DT "H5''" H N N 302 DT "H4'" H N N 303 DT "H3'" H N N 304 DT "HO3'" H N N 305 DT "H2'" H N N 306 DT "H2''" H N N 307 DT "H1'" H N N 308 DT H3 H N N 309 DT H71 H N N 310 DT H72 H N N 311 DT H73 H N N 312 DT H6 H N N 313 GLN N N N N 314 GLN CA C N S 315 GLN C C N N 316 GLN O O N N 317 GLN CB C N N 318 GLN CG C N N 319 GLN CD C N N 320 GLN OE1 O N N 321 GLN NE2 N N N 322 GLN OXT O N N 323 GLN H H N N 324 GLN H2 H N N 325 GLN HA H N N 326 GLN HB2 H N N 327 GLN HB3 H N N 328 GLN HG2 H N N 329 GLN HG3 H N N 330 GLN HE21 H N N 331 GLN HE22 H N N 332 GLN HXT H N N 333 GLU N N N N 334 GLU CA C N S 335 GLU C C N N 336 GLU O O N N 337 GLU CB C N N 338 GLU CG C N N 339 GLU CD C N N 340 GLU OE1 O N N 341 GLU OE2 O N N 342 GLU OXT O N N 343 GLU H H N N 344 GLU H2 H N N 345 GLU HA H N N 346 GLU HB2 H N N 347 GLU HB3 H N N 348 GLU HG2 H N N 349 GLU HG3 H N N 350 GLU HE2 H N N 351 GLU HXT H N N 352 GLY N N N N 353 GLY CA C N N 354 GLY C C N N 355 GLY O O N N 356 GLY OXT O N N 357 GLY H H N N 358 GLY H2 H N N 359 GLY HA2 H N N 360 GLY HA3 H N N 361 GLY HXT H N N 362 GOL C1 C N N 363 GOL O1 O N N 364 GOL C2 C N N 365 GOL O2 O N N 366 GOL C3 C N N 367 GOL O3 O N N 368 GOL H11 H N N 369 GOL H12 H N N 370 GOL HO1 H N N 371 GOL H2 H N N 372 GOL HO2 H N N 373 GOL H31 H N N 374 GOL H32 H N N 375 GOL HO3 H N N 376 HIS N N N N 377 HIS CA C N S 378 HIS C C N N 379 HIS O O N N 380 HIS CB C N N 381 HIS CG C Y N 382 HIS ND1 N Y N 383 HIS CD2 C Y N 384 HIS CE1 C Y N 385 HIS NE2 N Y N 386 HIS OXT O N N 387 HIS H H N N 388 HIS H2 H N N 389 HIS HA H N N 390 HIS HB2 H N N 391 HIS HB3 H N N 392 HIS HD1 H N N 393 HIS HD2 H N N 394 HIS HE1 H N N 395 HIS HE2 H N N 396 HIS HXT H N N 397 HOH O O N N 398 HOH H1 H N N 399 HOH H2 H N N 400 ILE N N N N 401 ILE CA C N S 402 ILE C C N N 403 ILE O O N N 404 ILE CB C N S 405 ILE CG1 C N N 406 ILE CG2 C N N 407 ILE CD1 C N N 408 ILE OXT O N N 409 ILE H H N N 410 ILE H2 H N N 411 ILE HA H N N 412 ILE HB H N N 413 ILE HG12 H N N 414 ILE HG13 H N N 415 ILE HG21 H N N 416 ILE HG22 H N N 417 ILE HG23 H N N 418 ILE HD11 H N N 419 ILE HD12 H N N 420 ILE HD13 H N N 421 ILE HXT H N N 422 LEU N N N N 423 LEU CA C N S 424 LEU C C N N 425 LEU O O N N 426 LEU CB C N N 427 LEU CG C N N 428 LEU CD1 C N N 429 LEU CD2 C N N 430 LEU OXT O N N 431 LEU H H N N 432 LEU H2 H N N 433 LEU HA H N N 434 LEU HB2 H N N 435 LEU HB3 H N N 436 LEU HG H N N 437 LEU HD11 H N N 438 LEU HD12 H N N 439 LEU HD13 H N N 440 LEU HD21 H N N 441 LEU HD22 H N N 442 LEU HD23 H N N 443 LEU HXT H N N 444 LYS N N N N 445 LYS CA C N S 446 LYS C C N N 447 LYS O O N N 448 LYS CB C N N 449 LYS CG C N N 450 LYS CD C N N 451 LYS CE C N N 452 LYS NZ N N N 453 LYS OXT O N N 454 LYS H H N N 455 LYS H2 H N N 456 LYS HA H N N 457 LYS HB2 H N N 458 LYS HB3 H N N 459 LYS HG2 H N N 460 LYS HG3 H N N 461 LYS HD2 H N N 462 LYS HD3 H N N 463 LYS HE2 H N N 464 LYS HE3 H N N 465 LYS HZ1 H N N 466 LYS HZ2 H N N 467 LYS HZ3 H N N 468 LYS HXT H N N 469 MET N N N N 470 MET CA C N S 471 MET C C N N 472 MET O O N N 473 MET CB C N N 474 MET CG C N N 475 MET SD S N N 476 MET CE C N N 477 MET OXT O N N 478 MET H H N N 479 MET H2 H N N 480 MET HA H N N 481 MET HB2 H N N 482 MET HB3 H N N 483 MET HG2 H N N 484 MET HG3 H N N 485 MET HE1 H N N 486 MET HE2 H N N 487 MET HE3 H N N 488 MET HXT H N N 489 PHE N N N N 490 PHE CA C N S 491 PHE C C N N 492 PHE O O N N 493 PHE CB C N N 494 PHE CG C Y N 495 PHE CD1 C Y N 496 PHE CD2 C Y N 497 PHE CE1 C Y N 498 PHE CE2 C Y N 499 PHE CZ C Y N 500 PHE OXT O N N 501 PHE H H N N 502 PHE H2 H N N 503 PHE HA H N N 504 PHE HB2 H N N 505 PHE HB3 H N N 506 PHE HD1 H N N 507 PHE HD2 H N N 508 PHE HE1 H N N 509 PHE HE2 H N N 510 PHE HZ H N N 511 PHE HXT H N N 512 PRO N N N N 513 PRO CA C N S 514 PRO C C N N 515 PRO O O N N 516 PRO CB C N N 517 PRO CG C N N 518 PRO CD C N N 519 PRO OXT O N N 520 PRO H H N N 521 PRO HA H N N 522 PRO HB2 H N N 523 PRO HB3 H N N 524 PRO HG2 H N N 525 PRO HG3 H N N 526 PRO HD2 H N N 527 PRO HD3 H N N 528 PRO HXT H N N 529 SER N N N N 530 SER CA C N S 531 SER C C N N 532 SER O O N N 533 SER CB C N N 534 SER OG O N N 535 SER OXT O N N 536 SER H H N N 537 SER H2 H N N 538 SER HA H N N 539 SER HB2 H N N 540 SER HB3 H N N 541 SER HG H N N 542 SER HXT H N N 543 THR N N N N 544 THR CA C N S 545 THR C C N N 546 THR O O N N 547 THR CB C N R 548 THR OG1 O N N 549 THR CG2 C N N 550 THR OXT O N N 551 THR H H N N 552 THR H2 H N N 553 THR HA H N N 554 THR HB H N N 555 THR HG1 H N N 556 THR HG21 H N N 557 THR HG22 H N N 558 THR HG23 H N N 559 THR HXT H N N 560 TYR N N N N 561 TYR CA C N S 562 TYR C C N N 563 TYR O O N N 564 TYR CB C N N 565 TYR CG C Y N 566 TYR CD1 C Y N 567 TYR CD2 C Y N 568 TYR CE1 C Y N 569 TYR CE2 C Y N 570 TYR CZ C Y N 571 TYR OH O N N 572 TYR OXT O N N 573 TYR H H N N 574 TYR H2 H N N 575 TYR HA H N N 576 TYR HB2 H N N 577 TYR HB3 H N N 578 TYR HD1 H N N 579 TYR HD2 H N N 580 TYR HE1 H N N 581 TYR HE2 H N N 582 TYR HH H N N 583 TYR HXT H N N 584 VAL N N N N 585 VAL CA C N S 586 VAL C C N N 587 VAL O O N N 588 VAL CB C N N 589 VAL CG1 C N N 590 VAL CG2 C N N 591 VAL OXT O N N 592 VAL H H N N 593 VAL H2 H N N 594 VAL HA H N N 595 VAL HB H N N 596 VAL HG11 H N N 597 VAL HG12 H N N 598 VAL HG13 H N N 599 VAL HG21 H N N 600 VAL HG22 H N N 601 VAL HG23 H N N 602 VAL HXT H N N 603 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0OJ OAB PBC doub N N 1 0OJ OAF PBC sing N N 2 0OJ OAG PBC sing N N 3 0OJ PBC OAS sing N N 4 0OJ OAH PBD doub N N 5 0OJ OAC PBD sing N N 6 0OJ OAT PBD sing N N 7 0OJ OAT PBE sing N N 8 0OJ PBD OAR sing N N 9 0OJ C2 N1 doub Y N 10 0OJ C2 N3 sing Y N 11 0OJ N1 C6 sing Y N 12 0OJ OAS PBE sing N N 13 0OJ PBE OAI doub N N 14 0OJ PBE OAD sing N N 15 0OJ N3 C4 doub Y N 16 0OJ C6 N6 sing N N 17 0OJ C6 C5 doub Y N 18 0OJ OAR CAL sing N N 19 0OJ C4 C5 sing Y N 20 0OJ C4 N9 sing Y N 21 0OJ CAL CAY sing N N 22 0OJ C5 N7 sing Y N 23 0OJ N9 CBB sing N N 24 0OJ N9 C8 sing Y N 25 0OJ CAM CAX sing N N 26 0OJ CAM CBB sing N N 27 0OJ CAY CAZ sing N N 28 0OJ CAY CAX sing N N 29 0OJ N7 C8 doub Y N 30 0OJ CAZ CBB sing N N 31 0OJ CAZ CAN sing N N 32 0OJ CAX OAE sing N N 33 0OJ CBB CAN sing N N 34 0OJ OAF H1 sing N N 35 0OJ OAG H2 sing N N 36 0OJ OAD H3 sing N N 37 0OJ OAC H4 sing N N 38 0OJ CAL H5 sing N N 39 0OJ CAL H6 sing N N 40 0OJ CAY H7 sing N N 41 0OJ CAZ H8 sing N N 42 0OJ CAN H9 sing N N 43 0OJ CAN H10 sing N N 44 0OJ CAX H11 sing N N 45 0OJ OAE H12 sing N N 46 0OJ CAM H13 sing N N 47 0OJ CAM H14 sing N N 48 0OJ C8 H15 sing N N 49 0OJ C2 H16 sing N N 50 0OJ N6 H17 sing N N 51 0OJ N6 H18 sing N N 52 ALA N CA sing N N 53 ALA N H sing N N 54 ALA N H2 sing N N 55 ALA CA C sing N N 56 ALA CA CB sing N N 57 ALA CA HA sing N N 58 ALA C O doub N N 59 ALA C OXT sing N N 60 ALA CB HB1 sing N N 61 ALA CB HB2 sing N N 62 ALA CB HB3 sing N N 63 ALA OXT HXT sing N N 64 ARG N CA sing N N 65 ARG N H sing N N 66 ARG N H2 sing N N 67 ARG CA C sing N N 68 ARG CA CB sing N N 69 ARG CA HA sing N N 70 ARG C O doub N N 71 ARG C OXT sing N N 72 ARG CB CG sing N N 73 ARG CB HB2 sing N N 74 ARG CB HB3 sing N N 75 ARG CG CD sing N N 76 ARG CG HG2 sing N N 77 ARG CG HG3 sing N N 78 ARG CD NE sing N N 79 ARG CD HD2 sing N N 80 ARG CD HD3 sing N N 81 ARG NE CZ sing N N 82 ARG NE HE sing N N 83 ARG CZ NH1 sing N N 84 ARG CZ NH2 doub N N 85 ARG NH1 HH11 sing N N 86 ARG NH1 HH12 sing N N 87 ARG NH2 HH21 sing N N 88 ARG NH2 HH22 sing N N 89 ARG OXT HXT sing N N 90 ASN N CA sing N N 91 ASN N H sing N N 92 ASN N H2 sing N N 93 ASN CA C sing N N 94 ASN CA CB sing N N 95 ASN CA HA sing N N 96 ASN C O doub N N 97 ASN C OXT sing N N 98 ASN CB CG sing N N 99 ASN CB HB2 sing N N 100 ASN CB HB3 sing N N 101 ASN CG OD1 doub N N 102 ASN CG ND2 sing N N 103 ASN ND2 HD21 sing N N 104 ASN ND2 HD22 sing N N 105 ASN OXT HXT sing N N 106 ASP N CA sing N N 107 ASP N H sing N N 108 ASP N H2 sing N N 109 ASP CA C sing N N 110 ASP CA CB sing N N 111 ASP CA HA sing N N 112 ASP C O doub N N 113 ASP C OXT sing N N 114 ASP CB CG sing N N 115 ASP CB HB2 sing N N 116 ASP CB HB3 sing N N 117 ASP CG OD1 doub N N 118 ASP CG OD2 sing N N 119 ASP OD2 HD2 sing N N 120 ASP OXT HXT sing N N 121 CYS N CA sing N N 122 CYS N H sing N N 123 CYS N H2 sing N N 124 CYS CA C sing N N 125 CYS CA CB sing N N 126 CYS CA HA sing N N 127 CYS C O doub N N 128 CYS C OXT sing N N 129 CYS CB SG sing N N 130 CYS CB HB2 sing N N 131 CYS CB HB3 sing N N 132 CYS SG HG sing N N 133 CYS OXT HXT sing N N 134 DA OP3 P sing N N 135 DA OP3 HOP3 sing N N 136 DA P OP1 doub N N 137 DA P OP2 sing N N 138 DA P "O5'" sing N N 139 DA OP2 HOP2 sing N N 140 DA "O5'" "C5'" sing N N 141 DA "C5'" "C4'" sing N N 142 DA "C5'" "H5'" sing N N 143 DA "C5'" "H5''" sing N N 144 DA "C4'" "O4'" sing N N 145 DA "C4'" "C3'" sing N N 146 DA "C4'" "H4'" sing N N 147 DA "O4'" "C1'" sing N N 148 DA "C3'" "O3'" sing N N 149 DA "C3'" "C2'" sing N N 150 DA "C3'" "H3'" sing N N 151 DA "O3'" "HO3'" sing N N 152 DA "C2'" "C1'" sing N N 153 DA "C2'" "H2'" sing N N 154 DA "C2'" "H2''" sing N N 155 DA "C1'" N9 sing N N 156 DA "C1'" "H1'" sing N N 157 DA N9 C8 sing Y N 158 DA N9 C4 sing Y N 159 DA C8 N7 doub Y N 160 DA C8 H8 sing N N 161 DA N7 C5 sing Y N 162 DA C5 C6 sing Y N 163 DA C5 C4 doub Y N 164 DA C6 N6 sing N N 165 DA C6 N1 doub Y N 166 DA N6 H61 sing N N 167 DA N6 H62 sing N N 168 DA N1 C2 sing Y N 169 DA C2 N3 doub Y N 170 DA C2 H2 sing N N 171 DA N3 C4 sing Y N 172 DC OP3 P sing N N 173 DC OP3 HOP3 sing N N 174 DC P OP1 doub N N 175 DC P OP2 sing N N 176 DC P "O5'" sing N N 177 DC OP2 HOP2 sing N N 178 DC "O5'" "C5'" sing N N 179 DC "C5'" "C4'" sing N N 180 DC "C5'" "H5'" sing N N 181 DC "C5'" "H5''" sing N N 182 DC "C4'" "O4'" sing N N 183 DC "C4'" "C3'" sing N N 184 DC "C4'" "H4'" sing N N 185 DC "O4'" "C1'" sing N N 186 DC "C3'" "O3'" sing N N 187 DC "C3'" "C2'" sing N N 188 DC "C3'" "H3'" sing N N 189 DC "O3'" "HO3'" sing N N 190 DC "C2'" "C1'" sing N N 191 DC "C2'" "H2'" sing N N 192 DC "C2'" "H2''" sing N N 193 DC "C1'" N1 sing N N 194 DC "C1'" "H1'" sing N N 195 DC N1 C2 sing N N 196 DC N1 C6 sing N N 197 DC C2 O2 doub N N 198 DC C2 N3 sing N N 199 DC N3 C4 doub N N 200 DC C4 N4 sing N N 201 DC C4 C5 sing N N 202 DC N4 H41 sing N N 203 DC N4 H42 sing N N 204 DC C5 C6 doub N N 205 DC C5 H5 sing N N 206 DC C6 H6 sing N N 207 DG OP3 P sing N N 208 DG OP3 HOP3 sing N N 209 DG P OP1 doub N N 210 DG P OP2 sing N N 211 DG P "O5'" sing N N 212 DG OP2 HOP2 sing N N 213 DG "O5'" "C5'" sing N N 214 DG "C5'" "C4'" sing N N 215 DG "C5'" "H5'" sing N N 216 DG "C5'" "H5''" sing N N 217 DG "C4'" "O4'" sing N N 218 DG "C4'" "C3'" sing N N 219 DG "C4'" "H4'" sing N N 220 DG "O4'" "C1'" sing N N 221 DG "C3'" "O3'" sing N N 222 DG "C3'" "C2'" sing N N 223 DG "C3'" "H3'" sing N N 224 DG "O3'" "HO3'" sing N N 225 DG "C2'" "C1'" sing N N 226 DG "C2'" "H2'" sing N N 227 DG "C2'" "H2''" sing N N 228 DG "C1'" N9 sing N N 229 DG "C1'" "H1'" sing N N 230 DG N9 C8 sing Y N 231 DG N9 C4 sing Y N 232 DG C8 N7 doub Y N 233 DG C8 H8 sing N N 234 DG N7 C5 sing Y N 235 DG C5 C6 sing N N 236 DG C5 C4 doub Y N 237 DG C6 O6 doub N N 238 DG C6 N1 sing N N 239 DG N1 C2 sing N N 240 DG N1 H1 sing N N 241 DG C2 N2 sing N N 242 DG C2 N3 doub N N 243 DG N2 H21 sing N N 244 DG N2 H22 sing N N 245 DG N3 C4 sing N N 246 DOC N1 C2 sing N N 247 DOC N1 C6 sing N N 248 DOC N1 "C1'" sing N N 249 DOC C2 N3 sing N N 250 DOC C2 O2 doub N N 251 DOC N3 C4 doub N N 252 DOC C4 C5 sing N N 253 DOC C4 N4 sing N N 254 DOC C5 C6 doub N N 255 DOC C5 H5 sing N N 256 DOC C6 H6 sing N N 257 DOC N4 HN41 sing N N 258 DOC N4 HN42 sing N N 259 DOC "C1'" "C2'" sing N N 260 DOC "C1'" "O4'" sing N N 261 DOC "C1'" "H1'" sing N N 262 DOC "C2'" "C3'" sing N N 263 DOC "C2'" "H2'" sing N N 264 DOC "C2'" "H2''" sing N N 265 DOC "C3'" "C4'" sing N N 266 DOC "C3'" "H3'1" sing N N 267 DOC "C3'" "H3'2" sing N N 268 DOC "C4'" "O4'" sing N N 269 DOC "C4'" "C5'" sing N N 270 DOC "C4'" "H4'" sing N N 271 DOC "C5'" "O5'" sing N N 272 DOC "C5'" "H5'" sing N N 273 DOC "C5'" "H5''" sing N N 274 DOC "O5'" P sing N N 275 DOC P OP1 doub N N 276 DOC P OP2 sing N N 277 DOC P OP3 sing N N 278 DOC OP2 HOP2 sing N N 279 DOC OP3 HOP3 sing N N 280 DT OP3 P sing N N 281 DT OP3 HOP3 sing N N 282 DT P OP1 doub N N 283 DT P OP2 sing N N 284 DT P "O5'" sing N N 285 DT OP2 HOP2 sing N N 286 DT "O5'" "C5'" sing N N 287 DT "C5'" "C4'" sing N N 288 DT "C5'" "H5'" sing N N 289 DT "C5'" "H5''" sing N N 290 DT "C4'" "O4'" sing N N 291 DT "C4'" "C3'" sing N N 292 DT "C4'" "H4'" sing N N 293 DT "O4'" "C1'" sing N N 294 DT "C3'" "O3'" sing N N 295 DT "C3'" "C2'" sing N N 296 DT "C3'" "H3'" sing N N 297 DT "O3'" "HO3'" sing N N 298 DT "C2'" "C1'" sing N N 299 DT "C2'" "H2'" sing N N 300 DT "C2'" "H2''" sing N N 301 DT "C1'" N1 sing N N 302 DT "C1'" "H1'" sing N N 303 DT N1 C2 sing N N 304 DT N1 C6 sing N N 305 DT C2 O2 doub N N 306 DT C2 N3 sing N N 307 DT N3 C4 sing N N 308 DT N3 H3 sing N N 309 DT C4 O4 doub N N 310 DT C4 C5 sing N N 311 DT C5 C7 sing N N 312 DT C5 C6 doub N N 313 DT C7 H71 sing N N 314 DT C7 H72 sing N N 315 DT C7 H73 sing N N 316 DT C6 H6 sing N N 317 GLN N CA sing N N 318 GLN N H sing N N 319 GLN N H2 sing N N 320 GLN CA C sing N N 321 GLN CA CB sing N N 322 GLN CA HA sing N N 323 GLN C O doub N N 324 GLN C OXT sing N N 325 GLN CB CG sing N N 326 GLN CB HB2 sing N N 327 GLN CB HB3 sing N N 328 GLN CG CD sing N N 329 GLN CG HG2 sing N N 330 GLN CG HG3 sing N N 331 GLN CD OE1 doub N N 332 GLN CD NE2 sing N N 333 GLN NE2 HE21 sing N N 334 GLN NE2 HE22 sing N N 335 GLN OXT HXT sing N N 336 GLU N CA sing N N 337 GLU N H sing N N 338 GLU N H2 sing N N 339 GLU CA C sing N N 340 GLU CA CB sing N N 341 GLU CA HA sing N N 342 GLU C O doub N N 343 GLU C OXT sing N N 344 GLU CB CG sing N N 345 GLU CB HB2 sing N N 346 GLU CB HB3 sing N N 347 GLU CG CD sing N N 348 GLU CG HG2 sing N N 349 GLU CG HG3 sing N N 350 GLU CD OE1 doub N N 351 GLU CD OE2 sing N N 352 GLU OE2 HE2 sing N N 353 GLU OXT HXT sing N N 354 GLY N CA sing N N 355 GLY N H sing N N 356 GLY N H2 sing N N 357 GLY CA C sing N N 358 GLY CA HA2 sing N N 359 GLY CA HA3 sing N N 360 GLY C O doub N N 361 GLY C OXT sing N N 362 GLY OXT HXT sing N N 363 GOL C1 O1 sing N N 364 GOL C1 C2 sing N N 365 GOL C1 H11 sing N N 366 GOL C1 H12 sing N N 367 GOL O1 HO1 sing N N 368 GOL C2 O2 sing N N 369 GOL C2 C3 sing N N 370 GOL C2 H2 sing N N 371 GOL O2 HO2 sing N N 372 GOL C3 O3 sing N N 373 GOL C3 H31 sing N N 374 GOL C3 H32 sing N N 375 GOL O3 HO3 sing N N 376 HIS N CA sing N N 377 HIS N H sing N N 378 HIS N H2 sing N N 379 HIS CA C sing N N 380 HIS CA CB sing N N 381 HIS CA HA sing N N 382 HIS C O doub N N 383 HIS C OXT sing N N 384 HIS CB CG sing N N 385 HIS CB HB2 sing N N 386 HIS CB HB3 sing N N 387 HIS CG ND1 sing Y N 388 HIS CG CD2 doub Y N 389 HIS ND1 CE1 doub Y N 390 HIS ND1 HD1 sing N N 391 HIS CD2 NE2 sing Y N 392 HIS CD2 HD2 sing N N 393 HIS CE1 NE2 sing Y N 394 HIS CE1 HE1 sing N N 395 HIS NE2 HE2 sing N N 396 HIS OXT HXT sing N N 397 HOH O H1 sing N N 398 HOH O H2 sing N N 399 ILE N CA sing N N 400 ILE N H sing N N 401 ILE N H2 sing N N 402 ILE CA C sing N N 403 ILE CA CB sing N N 404 ILE CA HA sing N N 405 ILE C O doub N N 406 ILE C OXT sing N N 407 ILE CB CG1 sing N N 408 ILE CB CG2 sing N N 409 ILE CB HB sing N N 410 ILE CG1 CD1 sing N N 411 ILE CG1 HG12 sing N N 412 ILE CG1 HG13 sing N N 413 ILE CG2 HG21 sing N N 414 ILE CG2 HG22 sing N N 415 ILE CG2 HG23 sing N N 416 ILE CD1 HD11 sing N N 417 ILE CD1 HD12 sing N N 418 ILE CD1 HD13 sing N N 419 ILE OXT HXT sing N N 420 LEU N CA sing N N 421 LEU N H sing N N 422 LEU N H2 sing N N 423 LEU CA C sing N N 424 LEU CA CB sing N N 425 LEU CA HA sing N N 426 LEU C O doub N N 427 LEU C OXT sing N N 428 LEU CB CG sing N N 429 LEU CB HB2 sing N N 430 LEU CB HB3 sing N N 431 LEU CG CD1 sing N N 432 LEU CG CD2 sing N N 433 LEU CG HG sing N N 434 LEU CD1 HD11 sing N N 435 LEU CD1 HD12 sing N N 436 LEU CD1 HD13 sing N N 437 LEU CD2 HD21 sing N N 438 LEU CD2 HD22 sing N N 439 LEU CD2 HD23 sing N N 440 LEU OXT HXT sing N N 441 LYS N CA sing N N 442 LYS N H sing N N 443 LYS N H2 sing N N 444 LYS CA C sing N N 445 LYS CA CB sing N N 446 LYS CA HA sing N N 447 LYS C O doub N N 448 LYS C OXT sing N N 449 LYS CB CG sing N N 450 LYS CB HB2 sing N N 451 LYS CB HB3 sing N N 452 LYS CG CD sing N N 453 LYS CG HG2 sing N N 454 LYS CG HG3 sing N N 455 LYS CD CE sing N N 456 LYS CD HD2 sing N N 457 LYS CD HD3 sing N N 458 LYS CE NZ sing N N 459 LYS CE HE2 sing N N 460 LYS CE HE3 sing N N 461 LYS NZ HZ1 sing N N 462 LYS NZ HZ2 sing N N 463 LYS NZ HZ3 sing N N 464 LYS OXT HXT sing N N 465 MET N CA sing N N 466 MET N H sing N N 467 MET N H2 sing N N 468 MET CA C sing N N 469 MET CA CB sing N N 470 MET CA HA sing N N 471 MET C O doub N N 472 MET C OXT sing N N 473 MET CB CG sing N N 474 MET CB HB2 sing N N 475 MET CB HB3 sing N N 476 MET CG SD sing N N 477 MET CG HG2 sing N N 478 MET CG HG3 sing N N 479 MET SD CE sing N N 480 MET CE HE1 sing N N 481 MET CE HE2 sing N N 482 MET CE HE3 sing N N 483 MET OXT HXT sing N N 484 PHE N CA sing N N 485 PHE N H sing N N 486 PHE N H2 sing N N 487 PHE CA C sing N N 488 PHE CA CB sing N N 489 PHE CA HA sing N N 490 PHE C O doub N N 491 PHE C OXT sing N N 492 PHE CB CG sing N N 493 PHE CB HB2 sing N N 494 PHE CB HB3 sing N N 495 PHE CG CD1 doub Y N 496 PHE CG CD2 sing Y N 497 PHE CD1 CE1 sing Y N 498 PHE CD1 HD1 sing N N 499 PHE CD2 CE2 doub Y N 500 PHE CD2 HD2 sing N N 501 PHE CE1 CZ doub Y N 502 PHE CE1 HE1 sing N N 503 PHE CE2 CZ sing Y N 504 PHE CE2 HE2 sing N N 505 PHE CZ HZ sing N N 506 PHE OXT HXT sing N N 507 PRO N CA sing N N 508 PRO N CD sing N N 509 PRO N H sing N N 510 PRO CA C sing N N 511 PRO CA CB sing N N 512 PRO CA HA sing N N 513 PRO C O doub N N 514 PRO C OXT sing N N 515 PRO CB CG sing N N 516 PRO CB HB2 sing N N 517 PRO CB HB3 sing N N 518 PRO CG CD sing N N 519 PRO CG HG2 sing N N 520 PRO CG HG3 sing N N 521 PRO CD HD2 sing N N 522 PRO CD HD3 sing N N 523 PRO OXT HXT sing N N 524 SER N CA sing N N 525 SER N H sing N N 526 SER N H2 sing N N 527 SER CA C sing N N 528 SER CA CB sing N N 529 SER CA HA sing N N 530 SER C O doub N N 531 SER C OXT sing N N 532 SER CB OG sing N N 533 SER CB HB2 sing N N 534 SER CB HB3 sing N N 535 SER OG HG sing N N 536 SER OXT HXT sing N N 537 THR N CA sing N N 538 THR N H sing N N 539 THR N H2 sing N N 540 THR CA C sing N N 541 THR CA CB sing N N 542 THR CA HA sing N N 543 THR C O doub N N 544 THR C OXT sing N N 545 THR CB OG1 sing N N 546 THR CB CG2 sing N N 547 THR CB HB sing N N 548 THR OG1 HG1 sing N N 549 THR CG2 HG21 sing N N 550 THR CG2 HG22 sing N N 551 THR CG2 HG23 sing N N 552 THR OXT HXT sing N N 553 TYR N CA sing N N 554 TYR N H sing N N 555 TYR N H2 sing N N 556 TYR CA C sing N N 557 TYR CA CB sing N N 558 TYR CA HA sing N N 559 TYR C O doub N N 560 TYR C OXT sing N N 561 TYR CB CG sing N N 562 TYR CB HB2 sing N N 563 TYR CB HB3 sing N N 564 TYR CG CD1 doub Y N 565 TYR CG CD2 sing Y N 566 TYR CD1 CE1 sing Y N 567 TYR CD1 HD1 sing N N 568 TYR CD2 CE2 doub Y N 569 TYR CD2 HD2 sing N N 570 TYR CE1 CZ doub Y N 571 TYR CE1 HE1 sing N N 572 TYR CE2 CZ sing Y N 573 TYR CE2 HE2 sing N N 574 TYR CZ OH sing N N 575 TYR OH HH sing N N 576 TYR OXT HXT sing N N 577 VAL N CA sing N N 578 VAL N H sing N N 579 VAL N H2 sing N N 580 VAL CA C sing N N 581 VAL CA CB sing N N 582 VAL CA HA sing N N 583 VAL C O doub N N 584 VAL C OXT sing N N 585 VAL CB CG1 sing N N 586 VAL CB CG2 sing N N 587 VAL CB HB sing N N 588 VAL CG1 HG11 sing N N 589 VAL CG1 HG12 sing N N 590 VAL CG1 HG13 sing N N 591 VAL CG2 HG21 sing N N 592 VAL CG2 HG22 sing N N 593 VAL CG2 HG23 sing N N 594 VAL OXT HXT sing N N 595 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4EBD 'double helix' 4EBD 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 9 1_555 0.049 -0.183 0.140 12.281 -8.728 -2.746 1 P_DA1:DT11_T P 1 ? T 11 ? 20 1 1 B DG 2 1_555 C DC 8 1_555 -0.051 -0.464 0.287 7.212 -3.211 -3.243 2 P_DG2:DC10_T P 2 ? T 10 ? 19 1 1 B DG 3 1_555 C DC 7 1_555 0.028 -0.225 0.132 -0.743 -5.893 0.707 3 P_DG3:DC9_T P 3 ? T 9 ? 19 1 1 B DA 4 1_555 C DT 6 1_555 0.129 -0.198 0.207 7.113 -11.374 3.181 4 P_DA4:DT8_T P 4 ? T 8 ? 20 1 1 B DC 5 1_555 C DG 5 1_555 -0.113 -0.252 -0.134 11.191 -12.408 -0.004 5 P_DC5:DG7_T P 5 ? T 7 ? 19 1 1 B DC 6 1_555 C DG 4 1_555 0.331 -0.131 0.235 2.878 -11.439 -2.383 6 P_DC6:DG6_T P 6 ? T 6 ? 19 1 1 B DOC 7 1_555 C DG 3 1_555 0.247 0.030 -0.351 2.212 0.737 4.062 7 P_DOC7:DG5_T P 7 ? T 5 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 9 1_555 B DG 2 1_555 C DC 8 1_555 0.427 -0.573 3.410 -2.287 -1.399 30.802 -0.793 -1.262 3.392 -2.628 4.296 30.916 1 PP_DA1DG2:DC10DT11_TT P 1 ? T 11 ? P 2 ? T 10 ? 1 B DG 2 1_555 C DC 8 1_555 B DG 3 1_555 C DC 7 1_555 0.179 -1.046 3.468 2.230 -2.941 39.215 -1.179 0.018 3.539 -4.371 -3.314 39.382 2 PP_DG2DG3:DC9DC10_TT P 2 ? T 10 ? P 3 ? T 9 ? 1 B DG 3 1_555 C DC 7 1_555 B DA 4 1_555 C DT 6 1_555 0.329 -0.721 3.192 0.457 6.965 28.784 -2.814 -0.552 2.945 13.756 -0.903 29.601 3 PP_DG3DA4:DT8DC9_TT P 3 ? T 9 ? P 4 ? T 8 ? 1 B DA 4 1_555 C DT 6 1_555 B DC 5 1_555 C DG 5 1_555 0.530 -1.467 3.152 0.426 1.673 32.082 -2.936 -0.885 3.080 3.024 -0.771 32.128 4 PP_DA4DC5:DG7DT8_TT P 4 ? T 8 ? P 5 ? T 7 ? 1 B DC 5 1_555 C DG 5 1_555 B DC 6 1_555 C DG 4 1_555 -0.419 -1.940 3.509 -3.617 8.283 32.494 -4.706 0.128 2.967 14.458 6.313 33.695 5 PP_DC5DC6:DG6DG7_TT P 5 ? T 7 ? P 6 ? T 6 ? 1 B DC 6 1_555 C DG 4 1_555 B DOC 7 1_555 C DG 3 1_555 -0.519 -1.468 3.383 5.936 4.028 21.683 -5.113 3.378 2.826 10.350 -15.251 22.825 6 PP_DC6DOC7:DG5DG6_TT P 6 ? T 6 ? P 7 ? T 5 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 ;South-methanocarba-2'-deoxyadenosine triphosphate ; 0OJ 5 'CALCIUM ION' CA 6 GLYCEROL GOL 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3GV5 _pdbx_initial_refinement_model.details 'PDB ENTRY 3GV5' #