data_4EBR # _entry.id 4EBR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4EBR RCSB RCSB071419 WWPDB D_1000071419 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4EBR _pdbx_database_status.recvd_initial_deposition_date 2012-03-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hong, S.B.' 1 'Kim, B.W.' 2 'Kim, J.H.' 3 'Song, H.K.' 4 # _citation.id primary _citation.title 'Structure of the autophagic E2 enzyme Atg10' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 68 _citation.page_first 1409 _citation.page_last 1417 _citation.year 2012 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22993095 _citation.pdbx_database_id_DOI 10.1107/S0907444912034166 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hong, S.B.' 1 primary 'Kim, B.W.' 2 primary 'Kim, J.H.' 3 primary 'Song, H.K.' 4 # _cell.entry_id 4EBR _cell.length_a 127.833 _cell.length_b 127.833 _cell.length_c 169.589 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4EBR _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ubiquitin-like-conjugating enzyme ATG10' 20109.283 2 6.3.2.- ? ? ? 2 non-polymer syn 'MERCURY (II) ION' 200.590 2 ? ? ? ? 3 water nat water 18.015 36 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Autophagy-related protein 10' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GS(MSE)IPYQEWHSQLQSLYDSQIFHNWALCQDVHLNDEKDGLLLRLIPTRQLQKNTERIENKLLNHIELYLTYSKVYN EPLLLLRIWEEKSIDGIP(MSE)TKL(MSE)LPTDIESLLDVQGKFQLGLDTIINLEGSVWYSFHPCDTSCIVGDQAEF (MSE)STYLRRWVSIFIFSWLGYEDS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMIPYQEWHSQLQSLYDSQIFHNWALCQDVHLNDEKDGLLLRLIPTRQLQKNTERIENKLLNHIELYLTYSKVYNEPLL LLRIWEEKSIDGIPMTKLMLPTDIESLLDVQGKFQLGLDTIINLEGSVWYSFHPCDTSCIVGDQAEFMSTYLRRWVSIFI FSWLGYEDS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MSE n 1 4 ILE n 1 5 PRO n 1 6 TYR n 1 7 GLN n 1 8 GLU n 1 9 TRP n 1 10 HIS n 1 11 SER n 1 12 GLN n 1 13 LEU n 1 14 GLN n 1 15 SER n 1 16 LEU n 1 17 TYR n 1 18 ASP n 1 19 SER n 1 20 GLN n 1 21 ILE n 1 22 PHE n 1 23 HIS n 1 24 ASN n 1 25 TRP n 1 26 ALA n 1 27 LEU n 1 28 CYS n 1 29 GLN n 1 30 ASP n 1 31 VAL n 1 32 HIS n 1 33 LEU n 1 34 ASN n 1 35 ASP n 1 36 GLU n 1 37 LYS n 1 38 ASP n 1 39 GLY n 1 40 LEU n 1 41 LEU n 1 42 LEU n 1 43 ARG n 1 44 LEU n 1 45 ILE n 1 46 PRO n 1 47 THR n 1 48 ARG n 1 49 GLN n 1 50 LEU n 1 51 GLN n 1 52 LYS n 1 53 ASN n 1 54 THR n 1 55 GLU n 1 56 ARG n 1 57 ILE n 1 58 GLU n 1 59 ASN n 1 60 LYS n 1 61 LEU n 1 62 LEU n 1 63 ASN n 1 64 HIS n 1 65 ILE n 1 66 GLU n 1 67 LEU n 1 68 TYR n 1 69 LEU n 1 70 THR n 1 71 TYR n 1 72 SER n 1 73 LYS n 1 74 VAL n 1 75 TYR n 1 76 ASN n 1 77 GLU n 1 78 PRO n 1 79 LEU n 1 80 LEU n 1 81 LEU n 1 82 LEU n 1 83 ARG n 1 84 ILE n 1 85 TRP n 1 86 GLU n 1 87 GLU n 1 88 LYS n 1 89 SER n 1 90 ILE n 1 91 ASP n 1 92 GLY n 1 93 ILE n 1 94 PRO n 1 95 MSE n 1 96 THR n 1 97 LYS n 1 98 LEU n 1 99 MSE n 1 100 LEU n 1 101 PRO n 1 102 THR n 1 103 ASP n 1 104 ILE n 1 105 GLU n 1 106 SER n 1 107 LEU n 1 108 LEU n 1 109 ASP n 1 110 VAL n 1 111 GLN n 1 112 GLY n 1 113 LYS n 1 114 PHE n 1 115 GLN n 1 116 LEU n 1 117 GLY n 1 118 LEU n 1 119 ASP n 1 120 THR n 1 121 ILE n 1 122 ILE n 1 123 ASN n 1 124 LEU n 1 125 GLU n 1 126 GLY n 1 127 SER n 1 128 VAL n 1 129 TRP n 1 130 TYR n 1 131 SER n 1 132 PHE n 1 133 HIS n 1 134 PRO n 1 135 CYS n 1 136 ASP n 1 137 THR n 1 138 SER n 1 139 CYS n 1 140 ILE n 1 141 VAL n 1 142 GLY n 1 143 ASP n 1 144 GLN n 1 145 ALA n 1 146 GLU n 1 147 PHE n 1 148 MSE n 1 149 SER n 1 150 THR n 1 151 TYR n 1 152 LEU n 1 153 ARG n 1 154 ARG n 1 155 TRP n 1 156 VAL n 1 157 SER n 1 158 ILE n 1 159 PHE n 1 160 ILE n 1 161 PHE n 1 162 SER n 1 163 TRP n 1 164 LEU n 1 165 GLY n 1 166 TYR n 1 167 GLU n 1 168 ASP n 1 169 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ATG10, APG10, YLL042C' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508, S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ATG10_YEAST _struct_ref.pdbx_db_accession Q07879 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MIPYQEWHSQLQSLYDSQIFHNWALCQDVHLNDEKDGLLLRLIPTRQLQKNTERIENKLLNHIELYLTYSKVYNEPLLLL RIWEEKSIDGIPMTKLMLPTDIESLLDVQGKFQLGLDTIINLEGSVWYSFHPCDTSCIVGDQAEFMSTYLRRWVSIFIFS WLGYEDS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4EBR A 3 ? 169 ? Q07879 1 ? 167 ? 1 167 2 1 4EBR B 3 ? 169 ? Q07879 1 ? 167 ? 1 167 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4EBR GLY A 1 ? UNP Q07879 ? ? 'EXPRESSION TAG' -1 1 1 4EBR SER A 2 ? UNP Q07879 ? ? 'EXPRESSION TAG' 0 2 2 4EBR GLY B 1 ? UNP Q07879 ? ? 'EXPRESSION TAG' -1 3 2 4EBR SER B 2 ? UNP Q07879 ? ? 'EXPRESSION TAG' 0 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HG non-polymer . 'MERCURY (II) ION' ? 'Hg 2' 200.590 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4EBR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.97 _exptl_crystal.density_percent_sol 75.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '50mM bis-Tris-HCl (pH 6.15), 3M NaCl, 1mM 1,4-diacetoxymercury-2,3-dimetoxybutane, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 315' 2009-11-07 ? 2 CCD 'ADSC QUANTUM 210' 2010-02-08 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'double crystal monochromator' MAD x-ray 2 1 M 'double crystal monochromator' 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97951 1.0 2 0.97966 1.0 3 0.96 1.0 4 1 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'PAL/PLS BEAMLINE 4A' PAL/PLS 4A ? '0.97951, 0.97966, 0.96' 2 SYNCHROTRON 'PHOTON FACTORY BEAMLINE AR-NW12A' 'Photon Factory' AR-NW12A ? 1 # _reflns.entry_id 4EBR _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 27.835 _reflns.d_resolution_high 2.701 _reflns.number_obs 23007 _reflns.number_all 23338 _reflns.percent_possible_obs 98.58 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.75 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 4EBR _refine.ls_number_reflns_obs 21751 _refine.ls_number_reflns_all 23056 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.15 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.835 _refine.ls_d_res_high 2.701 _refine.ls_percent_reflns_obs 94.34 _refine.ls_R_factor_obs 0.224 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2107 _refine.ls_R_factor_R_free 0.2511 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.67 _refine.ls_number_reflns_R_free 1886 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.7844 _refine.aniso_B[2][2] 0.7844 _refine.aniso_B[3][3] -1.5688 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.372 _refine.solvent_model_param_bsol 50.819 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.98 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.36 _refine.pdbx_overall_phase_error 22.72 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1,2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2604 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 2642 _refine_hist.d_res_high 2.701 _refine_hist.d_res_low 27.835 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.010 ? ? 2674 ? 'X-RAY DIFFRACTION' f_angle_d 1.418 ? ? 3636 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 16.726 ? ? 964 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.099 ? ? 402 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 450 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 13 2.7012 2.7742 1295 0.3160 82.00 0.3601 . . 121 . . . . 'X-RAY DIFFRACTION' 13 2.7742 2.8558 1360 0.3086 86.00 0.3275 . . 124 . . . . 'X-RAY DIFFRACTION' 13 2.8558 2.9478 1538 0.2662 96.00 0.3335 . . 144 . . . . 'X-RAY DIFFRACTION' 13 2.9478 3.0531 1550 0.2530 98.00 0.2796 . . 144 . . . . 'X-RAY DIFFRACTION' 13 3.0531 3.1752 1527 0.2412 96.00 0.3019 . . 146 . . . . 'X-RAY DIFFRACTION' 13 3.1752 3.3194 1504 0.2319 94.00 0.2496 . . 147 . . . . 'X-RAY DIFFRACTION' 13 3.3194 3.4941 1467 0.2129 93.00 0.2481 . . 141 . . . . 'X-RAY DIFFRACTION' 13 3.4941 3.7126 1544 0.2097 95.00 0.2629 . . 144 . . . . 'X-RAY DIFFRACTION' 13 3.7126 3.9985 1545 0.1779 96.00 0.2046 . . 152 . . . . 'X-RAY DIFFRACTION' 13 3.9985 4.3994 1569 0.1653 97.00 0.1939 . . 150 . . . . 'X-RAY DIFFRACTION' 13 4.3994 5.0328 1615 0.1482 98.00 0.1743 . . 152 . . . . 'X-RAY DIFFRACTION' 13 5.0328 6.3285 1643 0.2088 99.00 0.2117 . . 157 . . . . 'X-RAY DIFFRACTION' 13 6.3285 27.8367 1708 0.2386 96.00 0.2499 . . 164 . . . . # _struct.entry_id 4EBR _struct.title 'Crystal structure of Autophagic E2, Atg10' _struct.pdbx_descriptor 'Ubiquitin-like-conjugating enzyme ATG10 (E.C.6.3.2.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4EBR _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'E2-Conjugating enzyme, Autophagy, ligase, protein binding, Atg3, Atg5, Atg7, Atg12, Thiolation' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 5 ? SER A 19 ? PRO A 3 SER A 17 1 ? 15 HELX_P HELX_P2 2 LEU A 100 ? ASP A 109 ? LEU A 98 ASP A 107 1 ? 10 HELX_P HELX_P3 3 ASP A 136 ? ILE A 140 ? ASP A 134 ILE A 138 5 ? 5 HELX_P HELX_P4 4 PHE A 147 ? THR A 150 ? PHE A 145 THR A 148 5 ? 4 HELX_P HELX_P5 5 TYR A 151 ? ILE A 160 ? TYR A 149 ILE A 158 1 ? 10 HELX_P HELX_P6 6 ILE A 160 ? GLY A 165 ? ILE A 158 GLY A 163 1 ? 6 HELX_P HELX_P7 7 PRO B 5 ? SER B 19 ? PRO B 3 SER B 17 1 ? 15 HELX_P HELX_P8 8 LEU B 100 ? VAL B 110 ? LEU B 98 VAL B 108 1 ? 11 HELX_P HELX_P9 9 ASP B 136 ? ILE B 140 ? ASP B 134 ILE B 138 5 ? 5 HELX_P HELX_P10 10 PHE B 147 ? SER B 149 ? PHE B 145 SER B 147 5 ? 3 HELX_P HELX_P11 11 THR B 150 ? ILE B 160 ? THR B 148 ILE B 158 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A SER 2 C ? ? ? 1_555 A MSE 3 N ? ? A SER 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 3 C ? ? ? 1_555 A ILE 4 N ? ? A MSE 1 A ILE 2 1_555 ? ? ? ? ? ? ? 1.322 ? covale3 covale ? ? A PRO 94 C ? ? ? 1_555 A MSE 95 N ? ? A PRO 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.336 ? covale4 covale ? ? A MSE 95 C ? ? ? 1_555 A THR 96 N ? ? A MSE 93 A THR 94 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A LEU 98 C ? ? ? 1_555 A MSE 99 N ? ? A LEU 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.335 ? covale6 covale ? ? A MSE 99 C ? ? ? 1_555 A LEU 100 N ? ? A MSE 97 A LEU 98 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? A PHE 147 C ? ? ? 1_555 A MSE 148 N ? ? A PHE 145 A MSE 146 1_555 ? ? ? ? ? ? ? 1.326 ? covale8 covale ? ? A MSE 148 C ? ? ? 1_555 A SER 149 N ? ? A MSE 146 A SER 147 1_555 ? ? ? ? ? ? ? 1.297 ? covale9 covale ? ? B SER 2 C ? ? ? 1_555 B MSE 3 N ? ? B SER 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.326 ? covale10 covale ? ? B MSE 3 C ? ? ? 1_555 B ILE 4 N ? ? B MSE 1 B ILE 2 1_555 ? ? ? ? ? ? ? 1.316 ? covale11 covale ? ? B PRO 94 C ? ? ? 1_555 B MSE 95 N ? ? B PRO 92 B MSE 93 1_555 ? ? ? ? ? ? ? 1.331 ? covale12 covale ? ? B MSE 95 C ? ? ? 1_555 B THR 96 N ? ? B MSE 93 B THR 94 1_555 ? ? ? ? ? ? ? 1.326 ? covale13 covale ? ? B LEU 98 C ? ? ? 1_555 B MSE 99 N ? ? B LEU 96 B MSE 97 1_555 ? ? ? ? ? ? ? 1.327 ? covale14 covale ? ? B MSE 99 C ? ? ? 1_555 B LEU 100 N ? ? B MSE 97 B LEU 98 1_555 ? ? ? ? ? ? ? 1.332 ? covale15 covale ? ? B PHE 147 C ? ? ? 1_555 B MSE 148 N ? ? B PHE 145 B MSE 146 1_555 ? ? ? ? ? ? ? 1.323 ? covale16 covale ? ? B MSE 148 C ? ? ? 1_555 B SER 149 N ? ? B MSE 146 B SER 147 1_555 ? ? ? ? ? ? ? 1.329 ? metalc1 metalc ? ? B CYS 139 SG ? ? ? 1_555 D HG . HG ? ? B CYS 137 B HG 201 1_555 ? ? ? ? ? ? ? 2.592 ? metalc2 metalc ? ? A CYS 139 SG ? ? ? 1_555 C HG . HG ? ? A CYS 137 A HG 201 1_555 ? ? ? ? ? ? ? 2.609 ? metalc3 metalc ? ? A ASP 136 O ? ? ? 1_555 C HG . HG ? ? A ASP 134 A HG 201 1_555 ? ? ? ? ? ? ? 2.818 ? metalc4 metalc ? ? A CYS 135 SG ? ? ? 1_555 C HG . HG ? ? A CYS 133 A HG 201 1_555 ? ? ? ? ? ? ? 2.822 ? metalc5 metalc ? ? B CYS 135 SG ? ? ? 1_555 D HG . HG ? ? B CYS 133 B HG 201 1_555 ? ? ? ? ? ? ? 2.954 ? metalc6 metalc ? ? B ASP 136 O ? ? ? 1_555 D HG . HG ? ? B ASP 134 B HG 201 1_555 ? ? ? ? ? ? ? 3.058 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 112 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 110 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 LYS _struct_mon_prot_cis.pdbx_label_seq_id_2 113 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 LYS _struct_mon_prot_cis.pdbx_auth_seq_id_2 111 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -21.16 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 12 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 28 ? LEU A 33 ? CYS A 26 LEU A 31 A 2 LEU A 40 ? LEU A 44 ? LEU A 38 LEU A 42 A 3 ASN A 63 ? SER A 72 ? ASN A 61 SER A 70 A 4 GLU A 77 ? ILE A 90 ? GLU A 75 ILE A 88 A 5 SER A 127 ? SER A 131 ? SER A 125 SER A 129 A 6 ASP A 119 ? LEU A 124 ? ASP A 117 LEU A 122 A 7 ASP B 119 ? LEU B 124 ? ASP B 117 LEU B 122 A 8 SER B 127 ? SER B 131 ? SER B 125 SER B 129 A 9 GLU B 77 ? ILE B 90 ? GLU B 75 ILE B 88 A 10 ASN B 63 ? SER B 72 ? ASN B 61 SER B 70 A 11 LEU B 40 ? LEU B 44 ? LEU B 38 LEU B 42 A 12 CYS B 28 ? LEU B 33 ? CYS B 26 LEU B 31 B 1 ILE A 93 ? LEU A 98 ? ILE A 91 LEU A 96 B 2 GLU A 77 ? ILE A 90 ? GLU A 75 ILE A 88 B 3 SER A 127 ? SER A 131 ? SER A 125 SER A 129 B 4 ASP A 119 ? LEU A 124 ? ASP A 117 LEU A 122 B 5 ASP B 119 ? LEU B 124 ? ASP B 117 LEU B 122 B 6 SER B 127 ? SER B 131 ? SER B 125 SER B 129 B 7 GLU B 77 ? ILE B 90 ? GLU B 75 ILE B 88 B 8 ILE B 93 ? LEU B 98 ? ILE B 91 LEU B 96 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 32 ? N HIS A 30 O LEU A 41 ? O LEU A 39 A 2 3 N LEU A 42 ? N LEU A 40 O LEU A 67 ? O LEU A 65 A 3 4 N HIS A 64 ? N HIS A 62 O TRP A 85 ? O TRP A 83 A 4 5 N LEU A 82 ? N LEU A 80 O TYR A 130 ? O TYR A 128 A 5 6 O SER A 127 ? O SER A 125 N LEU A 124 ? N LEU A 122 A 6 7 N ILE A 121 ? N ILE A 119 O ILE B 121 ? O ILE B 119 A 7 8 N ILE B 122 ? N ILE B 120 O TRP B 129 ? O TRP B 127 A 8 9 O TYR B 130 ? O TYR B 128 N LEU B 82 ? N LEU B 80 A 9 10 O LEU B 79 ? O LEU B 77 N THR B 70 ? N THR B 68 A 10 11 O LEU B 69 ? O LEU B 67 N LEU B 40 ? N LEU B 38 A 11 12 O LEU B 41 ? O LEU B 39 N HIS B 32 ? N HIS B 30 B 1 2 O MSE A 95 ? O MSE A 93 N LYS A 88 ? N LYS A 86 B 2 3 N LEU A 82 ? N LEU A 80 O TYR A 130 ? O TYR A 128 B 3 4 O SER A 127 ? O SER A 125 N LEU A 124 ? N LEU A 122 B 4 5 N ILE A 121 ? N ILE A 119 O ILE B 121 ? O ILE B 119 B 5 6 N ILE B 122 ? N ILE B 120 O TRP B 129 ? O TRP B 127 B 6 7 O TYR B 130 ? O TYR B 128 N LEU B 82 ? N LEU B 80 B 7 8 N LYS B 88 ? N LYS B 86 O MSE B 95 ? O MSE B 93 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE HG A 201' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE HG B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 CYS A 135 ? CYS A 133 . ? 1_555 ? 2 AC1 3 ASP A 136 ? ASP A 134 . ? 1_555 ? 3 AC1 3 CYS A 139 ? CYS A 137 . ? 1_555 ? 4 AC2 3 CYS B 135 ? CYS B 133 . ? 1_555 ? 5 AC2 3 ASP B 136 ? ASP B 134 . ? 1_555 ? 6 AC2 3 CYS B 139 ? CYS B 137 . ? 1_555 ? # _database_PDB_matrix.entry_id 4EBR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4EBR _atom_sites.fract_transf_matrix[1][1] 0.007823 _atom_sites.fract_transf_matrix[1][2] 0.004516 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009033 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005897 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C HG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 -1 GLY GLY A . n A 1 2 SER 2 0 0 SER SER A . n A 1 3 MSE 3 1 1 MSE MSE A . n A 1 4 ILE 4 2 2 ILE ILE A . n A 1 5 PRO 5 3 3 PRO PRO A . n A 1 6 TYR 6 4 4 TYR TYR A . n A 1 7 GLN 7 5 5 GLN GLN A . n A 1 8 GLU 8 6 6 GLU GLU A . n A 1 9 TRP 9 7 7 TRP TRP A . n A 1 10 HIS 10 8 8 HIS HIS A . n A 1 11 SER 11 9 9 SER SER A . n A 1 12 GLN 12 10 10 GLN GLN A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 GLN 14 12 12 GLN GLN A . n A 1 15 SER 15 13 13 SER SER A . n A 1 16 LEU 16 14 14 LEU LEU A . n A 1 17 TYR 17 15 15 TYR TYR A . n A 1 18 ASP 18 16 16 ASP ASP A . n A 1 19 SER 19 17 17 SER SER A . n A 1 20 GLN 20 18 18 GLN GLN A . n A 1 21 ILE 21 19 19 ILE ILE A . n A 1 22 PHE 22 20 20 PHE PHE A . n A 1 23 HIS 23 21 21 HIS HIS A . n A 1 24 ASN 24 22 22 ASN ASN A . n A 1 25 TRP 25 23 23 TRP TRP A . n A 1 26 ALA 26 24 24 ALA ALA A . n A 1 27 LEU 27 25 25 LEU LEU A . n A 1 28 CYS 28 26 26 CYS CYS A . n A 1 29 GLN 29 27 27 GLN GLN A . n A 1 30 ASP 30 28 28 ASP ASP A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 HIS 32 30 30 HIS HIS A . n A 1 33 LEU 33 31 31 LEU LEU A . n A 1 34 ASN 34 32 32 ASN ASN A . n A 1 35 ASP 35 33 33 ASP ASP A . n A 1 36 GLU 36 34 34 GLU GLU A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 ASP 38 36 36 ASP ASP A . n A 1 39 GLY 39 37 37 GLY GLY A . n A 1 40 LEU 40 38 38 LEU LEU A . n A 1 41 LEU 41 39 39 LEU LEU A . n A 1 42 LEU 42 40 40 LEU LEU A . n A 1 43 ARG 43 41 41 ARG ARG A . n A 1 44 LEU 44 42 42 LEU LEU A . n A 1 45 ILE 45 43 43 ILE ILE A . n A 1 46 PRO 46 44 44 PRO PRO A . n A 1 47 THR 47 45 45 THR THR A . n A 1 48 ARG 48 46 46 ARG ARG A . n A 1 49 GLN 49 47 47 GLN GLN A . n A 1 50 LEU 50 48 48 LEU LEU A . n A 1 51 GLN 51 49 ? ? ? A . n A 1 52 LYS 52 50 ? ? ? A . n A 1 53 ASN 53 51 ? ? ? A . n A 1 54 THR 54 52 ? ? ? A . n A 1 55 GLU 55 53 ? ? ? A . n A 1 56 ARG 56 54 ? ? ? A . n A 1 57 ILE 57 55 ? ? ? A . n A 1 58 GLU 58 56 ? ? ? A . n A 1 59 ASN 59 57 ? ? ? A . n A 1 60 LYS 60 58 ? ? ? A . n A 1 61 LEU 61 59 59 LEU LEU A . n A 1 62 LEU 62 60 60 LEU LEU A . n A 1 63 ASN 63 61 61 ASN ASN A . n A 1 64 HIS 64 62 62 HIS HIS A . n A 1 65 ILE 65 63 63 ILE ILE A . n A 1 66 GLU 66 64 64 GLU GLU A . n A 1 67 LEU 67 65 65 LEU LEU A . n A 1 68 TYR 68 66 66 TYR TYR A . n A 1 69 LEU 69 67 67 LEU LEU A . n A 1 70 THR 70 68 68 THR THR A . n A 1 71 TYR 71 69 69 TYR TYR A . n A 1 72 SER 72 70 70 SER SER A . n A 1 73 LYS 73 71 71 LYS LYS A . n A 1 74 VAL 74 72 72 VAL VAL A . n A 1 75 TYR 75 73 73 TYR TYR A . n A 1 76 ASN 76 74 74 ASN ASN A . n A 1 77 GLU 77 75 75 GLU GLU A . n A 1 78 PRO 78 76 76 PRO PRO A . n A 1 79 LEU 79 77 77 LEU LEU A . n A 1 80 LEU 80 78 78 LEU LEU A . n A 1 81 LEU 81 79 79 LEU LEU A . n A 1 82 LEU 82 80 80 LEU LEU A . n A 1 83 ARG 83 81 81 ARG ARG A . n A 1 84 ILE 84 82 82 ILE ILE A . n A 1 85 TRP 85 83 83 TRP TRP A . n A 1 86 GLU 86 84 84 GLU GLU A . n A 1 87 GLU 87 85 85 GLU GLU A . n A 1 88 LYS 88 86 86 LYS LYS A . n A 1 89 SER 89 87 87 SER SER A . n A 1 90 ILE 90 88 88 ILE ILE A . n A 1 91 ASP 91 89 89 ASP ASP A . n A 1 92 GLY 92 90 90 GLY GLY A . n A 1 93 ILE 93 91 91 ILE ILE A . n A 1 94 PRO 94 92 92 PRO PRO A . n A 1 95 MSE 95 93 93 MSE MSE A . n A 1 96 THR 96 94 94 THR THR A . n A 1 97 LYS 97 95 95 LYS LYS A . n A 1 98 LEU 98 96 96 LEU LEU A . n A 1 99 MSE 99 97 97 MSE MSE A . n A 1 100 LEU 100 98 98 LEU LEU A . n A 1 101 PRO 101 99 99 PRO PRO A . n A 1 102 THR 102 100 100 THR THR A . n A 1 103 ASP 103 101 101 ASP ASP A . n A 1 104 ILE 104 102 102 ILE ILE A . n A 1 105 GLU 105 103 103 GLU GLU A . n A 1 106 SER 106 104 104 SER SER A . n A 1 107 LEU 107 105 105 LEU LEU A . n A 1 108 LEU 108 106 106 LEU LEU A . n A 1 109 ASP 109 107 107 ASP ASP A . n A 1 110 VAL 110 108 108 VAL VAL A . n A 1 111 GLN 111 109 109 GLN GLN A . n A 1 112 GLY 112 110 110 GLY GLY A . n A 1 113 LYS 113 111 111 LYS LYS A . n A 1 114 PHE 114 112 112 PHE PHE A . n A 1 115 GLN 115 113 113 GLN GLN A . n A 1 116 LEU 116 114 114 LEU LEU A . n A 1 117 GLY 117 115 115 GLY GLY A . n A 1 118 LEU 118 116 116 LEU LEU A . n A 1 119 ASP 119 117 117 ASP ASP A . n A 1 120 THR 120 118 118 THR THR A . n A 1 121 ILE 121 119 119 ILE ILE A . n A 1 122 ILE 122 120 120 ILE ILE A . n A 1 123 ASN 123 121 121 ASN ASN A . n A 1 124 LEU 124 122 122 LEU LEU A . n A 1 125 GLU 125 123 123 GLU GLU A . n A 1 126 GLY 126 124 124 GLY GLY A . n A 1 127 SER 127 125 125 SER SER A . n A 1 128 VAL 128 126 126 VAL VAL A . n A 1 129 TRP 129 127 127 TRP TRP A . n A 1 130 TYR 130 128 128 TYR TYR A . n A 1 131 SER 131 129 129 SER SER A . n A 1 132 PHE 132 130 130 PHE PHE A . n A 1 133 HIS 133 131 131 HIS HIS A . n A 1 134 PRO 134 132 132 PRO PRO A . n A 1 135 CYS 135 133 133 CYS CYS A . n A 1 136 ASP 136 134 134 ASP ASP A . n A 1 137 THR 137 135 135 THR THR A . n A 1 138 SER 138 136 136 SER SER A . n A 1 139 CYS 139 137 137 CYS CYS A . n A 1 140 ILE 140 138 138 ILE ILE A . n A 1 141 VAL 141 139 139 VAL VAL A . n A 1 142 GLY 142 140 140 GLY GLY A . n A 1 143 ASP 143 141 141 ASP ASP A . n A 1 144 GLN 144 142 142 GLN GLN A . n A 1 145 ALA 145 143 143 ALA ALA A . n A 1 146 GLU 146 144 144 GLU GLU A . n A 1 147 PHE 147 145 145 PHE PHE A . n A 1 148 MSE 148 146 146 MSE MSE A . n A 1 149 SER 149 147 147 SER SER A . n A 1 150 THR 150 148 148 THR THR A . n A 1 151 TYR 151 149 149 TYR TYR A . n A 1 152 LEU 152 150 150 LEU LEU A . n A 1 153 ARG 153 151 151 ARG ARG A . n A 1 154 ARG 154 152 152 ARG ARG A . n A 1 155 TRP 155 153 153 TRP TRP A . n A 1 156 VAL 156 154 154 VAL VAL A . n A 1 157 SER 157 155 155 SER SER A . n A 1 158 ILE 158 156 156 ILE ILE A . n A 1 159 PHE 159 157 157 PHE PHE A . n A 1 160 ILE 160 158 158 ILE ILE A . n A 1 161 PHE 161 159 159 PHE PHE A . n A 1 162 SER 162 160 160 SER SER A . n A 1 163 TRP 163 161 161 TRP TRP A . n A 1 164 LEU 164 162 162 LEU LEU A . n A 1 165 GLY 165 163 163 GLY GLY A . n A 1 166 TYR 166 164 164 TYR TYR A . n A 1 167 GLU 167 165 165 GLU GLU A . n A 1 168 ASP 168 166 ? ? ? A . n A 1 169 SER 169 167 ? ? ? A . n B 1 1 GLY 1 -1 -1 GLY GLY B . n B 1 2 SER 2 0 0 SER SER B . n B 1 3 MSE 3 1 1 MSE MSE B . n B 1 4 ILE 4 2 2 ILE ILE B . n B 1 5 PRO 5 3 3 PRO PRO B . n B 1 6 TYR 6 4 4 TYR TYR B . n B 1 7 GLN 7 5 5 GLN GLN B . n B 1 8 GLU 8 6 6 GLU GLU B . n B 1 9 TRP 9 7 7 TRP TRP B . n B 1 10 HIS 10 8 8 HIS HIS B . n B 1 11 SER 11 9 9 SER SER B . n B 1 12 GLN 12 10 10 GLN GLN B . n B 1 13 LEU 13 11 11 LEU LEU B . n B 1 14 GLN 14 12 12 GLN GLN B . n B 1 15 SER 15 13 13 SER SER B . n B 1 16 LEU 16 14 14 LEU LEU B . n B 1 17 TYR 17 15 15 TYR TYR B . n B 1 18 ASP 18 16 16 ASP ASP B . n B 1 19 SER 19 17 17 SER SER B . n B 1 20 GLN 20 18 18 GLN GLN B . n B 1 21 ILE 21 19 19 ILE ILE B . n B 1 22 PHE 22 20 20 PHE PHE B . n B 1 23 HIS 23 21 21 HIS HIS B . n B 1 24 ASN 24 22 22 ASN ASN B . n B 1 25 TRP 25 23 23 TRP TRP B . n B 1 26 ALA 26 24 24 ALA ALA B . n B 1 27 LEU 27 25 25 LEU LEU B . n B 1 28 CYS 28 26 26 CYS CYS B . n B 1 29 GLN 29 27 27 GLN GLN B . n B 1 30 ASP 30 28 28 ASP ASP B . n B 1 31 VAL 31 29 29 VAL VAL B . n B 1 32 HIS 32 30 30 HIS HIS B . n B 1 33 LEU 33 31 31 LEU LEU B . n B 1 34 ASN 34 32 32 ASN ASN B . n B 1 35 ASP 35 33 33 ASP ASP B . n B 1 36 GLU 36 34 34 GLU GLU B . n B 1 37 LYS 37 35 35 LYS LYS B . n B 1 38 ASP 38 36 36 ASP ASP B . n B 1 39 GLY 39 37 37 GLY GLY B . n B 1 40 LEU 40 38 38 LEU LEU B . n B 1 41 LEU 41 39 39 LEU LEU B . n B 1 42 LEU 42 40 40 LEU LEU B . n B 1 43 ARG 43 41 41 ARG ARG B . n B 1 44 LEU 44 42 42 LEU LEU B . n B 1 45 ILE 45 43 43 ILE ILE B . n B 1 46 PRO 46 44 44 PRO PRO B . n B 1 47 THR 47 45 45 THR THR B . n B 1 48 ARG 48 46 46 ARG ARG B . n B 1 49 GLN 49 47 47 GLN GLN B . n B 1 50 LEU 50 48 48 LEU LEU B . n B 1 51 GLN 51 49 ? ? ? B . n B 1 52 LYS 52 50 ? ? ? B . n B 1 53 ASN 53 51 ? ? ? B . n B 1 54 THR 54 52 ? ? ? B . n B 1 55 GLU 55 53 ? ? ? B . n B 1 56 ARG 56 54 ? ? ? B . n B 1 57 ILE 57 55 ? ? ? B . n B 1 58 GLU 58 56 ? ? ? B . n B 1 59 ASN 59 57 ? ? ? B . n B 1 60 LYS 60 58 ? ? ? B . n B 1 61 LEU 61 59 59 LEU LEU B . n B 1 62 LEU 62 60 60 LEU LEU B . n B 1 63 ASN 63 61 61 ASN ASN B . n B 1 64 HIS 64 62 62 HIS HIS B . n B 1 65 ILE 65 63 63 ILE ILE B . n B 1 66 GLU 66 64 64 GLU GLU B . n B 1 67 LEU 67 65 65 LEU LEU B . n B 1 68 TYR 68 66 66 TYR TYR B . n B 1 69 LEU 69 67 67 LEU LEU B . n B 1 70 THR 70 68 68 THR THR B . n B 1 71 TYR 71 69 69 TYR TYR B . n B 1 72 SER 72 70 70 SER SER B . n B 1 73 LYS 73 71 71 LYS LYS B . n B 1 74 VAL 74 72 72 VAL VAL B . n B 1 75 TYR 75 73 73 TYR TYR B . n B 1 76 ASN 76 74 74 ASN ASN B . n B 1 77 GLU 77 75 75 GLU GLU B . n B 1 78 PRO 78 76 76 PRO PRO B . n B 1 79 LEU 79 77 77 LEU LEU B . n B 1 80 LEU 80 78 78 LEU LEU B . n B 1 81 LEU 81 79 79 LEU LEU B . n B 1 82 LEU 82 80 80 LEU LEU B . n B 1 83 ARG 83 81 81 ARG ARG B . n B 1 84 ILE 84 82 82 ILE ILE B . n B 1 85 TRP 85 83 83 TRP TRP B . n B 1 86 GLU 86 84 84 GLU GLU B . n B 1 87 GLU 87 85 85 GLU GLU B . n B 1 88 LYS 88 86 86 LYS LYS B . n B 1 89 SER 89 87 87 SER SER B . n B 1 90 ILE 90 88 88 ILE ILE B . n B 1 91 ASP 91 89 89 ASP ASP B . n B 1 92 GLY 92 90 90 GLY GLY B . n B 1 93 ILE 93 91 91 ILE ILE B . n B 1 94 PRO 94 92 92 PRO PRO B . n B 1 95 MSE 95 93 93 MSE MSE B . n B 1 96 THR 96 94 94 THR THR B . n B 1 97 LYS 97 95 95 LYS LYS B . n B 1 98 LEU 98 96 96 LEU LEU B . n B 1 99 MSE 99 97 97 MSE MSE B . n B 1 100 LEU 100 98 98 LEU LEU B . n B 1 101 PRO 101 99 99 PRO PRO B . n B 1 102 THR 102 100 100 THR THR B . n B 1 103 ASP 103 101 101 ASP ASP B . n B 1 104 ILE 104 102 102 ILE ILE B . n B 1 105 GLU 105 103 103 GLU GLU B . n B 1 106 SER 106 104 104 SER SER B . n B 1 107 LEU 107 105 105 LEU LEU B . n B 1 108 LEU 108 106 106 LEU LEU B . n B 1 109 ASP 109 107 107 ASP ASP B . n B 1 110 VAL 110 108 108 VAL VAL B . n B 1 111 GLN 111 109 109 GLN GLN B . n B 1 112 GLY 112 110 110 GLY GLY B . n B 1 113 LYS 113 111 111 LYS LYS B . n B 1 114 PHE 114 112 112 PHE PHE B . n B 1 115 GLN 115 113 113 GLN GLN B . n B 1 116 LEU 116 114 114 LEU LEU B . n B 1 117 GLY 117 115 115 GLY GLY B . n B 1 118 LEU 118 116 116 LEU LEU B . n B 1 119 ASP 119 117 117 ASP ASP B . n B 1 120 THR 120 118 118 THR THR B . n B 1 121 ILE 121 119 119 ILE ILE B . n B 1 122 ILE 122 120 120 ILE ILE B . n B 1 123 ASN 123 121 121 ASN ASN B . n B 1 124 LEU 124 122 122 LEU LEU B . n B 1 125 GLU 125 123 123 GLU GLU B . n B 1 126 GLY 126 124 124 GLY GLY B . n B 1 127 SER 127 125 125 SER SER B . n B 1 128 VAL 128 126 126 VAL VAL B . n B 1 129 TRP 129 127 127 TRP TRP B . n B 1 130 TYR 130 128 128 TYR TYR B . n B 1 131 SER 131 129 129 SER SER B . n B 1 132 PHE 132 130 130 PHE PHE B . n B 1 133 HIS 133 131 131 HIS HIS B . n B 1 134 PRO 134 132 132 PRO PRO B . n B 1 135 CYS 135 133 133 CYS CYS B . n B 1 136 ASP 136 134 134 ASP ASP B . n B 1 137 THR 137 135 135 THR THR B . n B 1 138 SER 138 136 136 SER SER B . n B 1 139 CYS 139 137 137 CYS CYS B . n B 1 140 ILE 140 138 138 ILE ILE B . n B 1 141 VAL 141 139 139 VAL VAL B . n B 1 142 GLY 142 140 140 GLY GLY B . n B 1 143 ASP 143 141 141 ASP ASP B . n B 1 144 GLN 144 142 142 GLN GLN B . n B 1 145 ALA 145 143 143 ALA ALA B . n B 1 146 GLU 146 144 144 GLU GLU B . n B 1 147 PHE 147 145 145 PHE PHE B . n B 1 148 MSE 148 146 146 MSE MSE B . n B 1 149 SER 149 147 147 SER SER B . n B 1 150 THR 150 148 148 THR THR B . n B 1 151 TYR 151 149 149 TYR TYR B . n B 1 152 LEU 152 150 150 LEU LEU B . n B 1 153 ARG 153 151 151 ARG ARG B . n B 1 154 ARG 154 152 152 ARG ARG B . n B 1 155 TRP 155 153 153 TRP TRP B . n B 1 156 VAL 156 154 154 VAL VAL B . n B 1 157 SER 157 155 155 SER SER B . n B 1 158 ILE 158 156 156 ILE ILE B . n B 1 159 PHE 159 157 157 PHE PHE B . n B 1 160 ILE 160 158 158 ILE ILE B . n B 1 161 PHE 161 159 159 PHE PHE B . n B 1 162 SER 162 160 160 SER SER B . n B 1 163 TRP 163 161 161 TRP TRP B . n B 1 164 LEU 164 162 162 LEU LEU B . n B 1 165 GLY 165 163 163 GLY GLY B . n B 1 166 TYR 166 164 164 TYR TYR B . n B 1 167 GLU 167 165 165 GLU GLU B . n B 1 168 ASP 168 166 ? ? ? B . n B 1 169 SER 169 167 ? ? ? B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 3 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 95 A MSE 93 ? MET SELENOMETHIONINE 3 A MSE 99 A MSE 97 ? MET SELENOMETHIONINE 4 A MSE 148 A MSE 146 ? MET SELENOMETHIONINE 5 B MSE 3 B MSE 1 ? MET SELENOMETHIONINE 6 B MSE 95 B MSE 93 ? MET SELENOMETHIONINE 7 B MSE 99 B MSE 97 ? MET SELENOMETHIONINE 8 B MSE 148 B MSE 146 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2180 ? 1 MORE -62 ? 1 'SSA (A^2)' 16020 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 317 ? E HOH . 2 1 B HOH 304 ? F HOH . 3 1 B HOH 315 ? F HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? B CYS 139 ? B CYS 137 ? 1_555 HG ? D HG . ? B HG 201 ? 1_555 SG ? B CYS 135 ? B CYS 133 ? 1_555 136.7 ? 2 SG ? B CYS 139 ? B CYS 137 ? 1_555 HG ? D HG . ? B HG 201 ? 1_555 O ? B ASP 136 ? B ASP 134 ? 1_555 75.7 ? 3 SG ? B CYS 135 ? B CYS 133 ? 1_555 HG ? D HG . ? B HG 201 ? 1_555 O ? B ASP 136 ? B ASP 134 ? 1_555 108.8 ? 4 SG ? A CYS 139 ? A CYS 137 ? 1_555 HG ? C HG . ? A HG 201 ? 1_555 O ? A ASP 136 ? A ASP 134 ? 1_555 101.6 ? 5 SG ? A CYS 139 ? A CYS 137 ? 1_555 HG ? C HG . ? A HG 201 ? 1_555 SG ? A CYS 135 ? A CYS 133 ? 1_555 151.3 ? 6 O ? A ASP 136 ? A ASP 134 ? 1_555 HG ? C HG . ? A HG 201 ? 1_555 SG ? A CYS 135 ? A CYS 133 ? 1_555 80.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-03 2 'Structure model' 1 1 2013-07-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 66.7484 60.9172 113.8053 0.7524 0.4343 0.4740 -0.1329 0.0855 -0.1379 8.2972 6.2177 6.4229 -3.8139 0.4800 2.0702 0.0233 -0.0440 1.1589 -0.6132 0.5121 -0.8412 -1.1239 0.6925 -0.5242 'X-RAY DIFFRACTION' 2 ? refined 69.1762 45.0089 108.3175 0.5072 0.5105 0.3556 0.0344 -0.0155 -0.0568 3.9434 3.7953 5.1365 -3.7570 -3.4038 3.6062 0.0363 -0.0538 -0.0463 -0.1116 0.2254 -0.0919 0.1123 0.7918 -0.2575 'X-RAY DIFFRACTION' 3 ? refined 61.5544 38.7830 119.4785 1.2157 1.0304 1.0402 0.0436 -0.0332 0.2543 1.6746 0.5984 0.5323 -0.9461 -0.9330 0.4693 0.0703 -1.7062 -0.4172 0.5579 -0.4314 -1.3010 0.4920 -0.1487 0.2537 'X-RAY DIFFRACTION' 4 ? refined 61.7120 52.9009 118.7661 0.4129 0.4704 0.3169 0.1028 -0.0039 0.0633 4.1940 7.7530 8.9192 -0.0897 1.9045 5.6716 -0.0218 -0.5156 0.1159 0.4765 0.3177 0.0563 -0.2252 -0.3791 -0.2864 'X-RAY DIFFRACTION' 5 ? refined 37.0395 42.6006 121.6993 0.4814 0.5446 0.4521 0.1813 0.0876 -0.0181 3.9089 3.1390 4.7430 -2.9068 1.0748 0.7934 -0.2503 -1.2176 0.3759 1.0922 0.0686 0.9275 0.4790 -0.1020 0.4226 'X-RAY DIFFRACTION' 6 ? refined 36.8940 35.6351 108.5384 0.3316 0.3602 0.6085 0.1023 0.0753 -0.1284 5.3534 6.7760 3.9116 -0.0882 -1.0783 1.2974 -0.0906 0.4659 -0.6392 -0.0844 -0.4680 0.9981 0.6096 -0.4534 0.4401 'X-RAY DIFFRACTION' 7 ? refined 45.1951 34.9189 95.7244 0.4638 0.4900 0.6371 0.1397 0.0217 -0.0695 1.4547 5.2381 6.8756 -2.4525 -1.4367 4.8107 0.3619 0.3039 -0.2359 -0.5298 0.0375 -0.0207 -0.2994 0.1642 -0.4802 'X-RAY DIFFRACTION' 8 ? refined 44.9710 49.9174 98.7665 1.0206 0.9618 1.1202 0.1968 -0.0465 -0.2179 0.2013 0.1034 2.3304 -0.0921 -0.4345 0.4770 0.3321 1.6806 0.4826 -1.3565 -1.2013 -0.3515 0.4556 -0.8308 1.4387 'X-RAY DIFFRACTION' 9 ? refined 47.2124 42.6096 107.7213 0.3867 0.4949 0.4342 -0.0070 0.0280 -0.0451 7.0420 2.7192 6.4189 -3.3638 -2.4204 3.5583 -0.1481 0.0353 0.3437 0.4988 0.2640 -0.5541 0.1081 0.4563 -0.2380 'X-RAY DIFFRACTION' 10 ? refined 33.3636 49.8118 113.2625 0.3000 0.3003 0.5168 0.0763 0.0400 -0.0496 8.1702 6.8407 8.6991 -3.6846 -2.7900 1.4153 -0.5371 -0.1254 0.4338 0.0382 -0.1308 0.3783 -0.8919 0.2805 0.3253 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ -1:31)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 32:106)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 107:118)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 119:165)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ -1:17)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 18:74)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 75:105)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 106:118)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 119:137)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 138:165)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SOLVE phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 A ASP 134 ? ? OG A SER 136 ? ? 1.57 2 1 CD A PRO 99 ? ? OH A TYR 128 ? ? 1.79 3 1 CG A PRO 99 ? ? CE1 A TYR 128 ? ? 1.80 4 1 OG1 A THR 148 ? ? NH1 A ARG 152 ? ? 1.89 5 1 OG B SER 155 ? ? O B HOH 303 ? ? 1.90 6 1 CE2 B PHE 112 ? ? CD2 B LEU 114 ? ? 1.96 7 1 CG A PRO 99 ? ? OH A TYR 128 ? ? 2.03 8 1 O A THR 148 ? ? O A HOH 306 ? ? 2.03 9 1 OG B SER 147 ? ? O B HOH 317 ? ? 2.05 10 1 O B LEU 106 ? ? O B GLN 109 ? ? 2.08 11 1 CZ B PHE 112 ? ? CD2 B LEU 114 ? ? 2.10 12 1 OH A TYR 4 ? ? OD1 A ASP 36 ? ? 2.13 13 1 O B ASP 107 ? ? N B GLN 109 ? ? 2.13 14 1 CG A PRO 99 ? ? CZ A TYR 128 ? ? 2.13 15 1 OE1 A GLN 5 ? ? O A HOH 313 ? ? 2.14 16 1 O A HOH 305 ? ? O A HOH 310 ? ? 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 123 ? ? 34.73 43.02 2 1 CYS A 133 ? ? -171.13 -177.70 3 1 GLN A 142 ? ? 74.08 -7.40 4 1 ILE A 158 ? ? -120.27 -62.10 5 1 GLN B 18 ? ? 81.15 0.61 6 1 ARG B 46 ? ? -106.80 -62.67 7 1 ILE B 158 ? ? -123.49 -65.01 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLN A 109 ? ? GLY A 110 ? ? -31.64 2 1 THR A 148 ? ? TYR A 149 ? ? -142.63 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 49 ? A GLN 51 2 1 Y 1 A LYS 50 ? A LYS 52 3 1 Y 1 A ASN 51 ? A ASN 53 4 1 Y 1 A THR 52 ? A THR 54 5 1 Y 1 A GLU 53 ? A GLU 55 6 1 Y 1 A ARG 54 ? A ARG 56 7 1 Y 1 A ILE 55 ? A ILE 57 8 1 Y 1 A GLU 56 ? A GLU 58 9 1 Y 1 A ASN 57 ? A ASN 59 10 1 Y 1 A LYS 58 ? A LYS 60 11 1 Y 1 A ASP 166 ? A ASP 168 12 1 Y 1 A SER 167 ? A SER 169 13 1 Y 1 B GLN 49 ? B GLN 51 14 1 Y 1 B LYS 50 ? B LYS 52 15 1 Y 1 B ASN 51 ? B ASN 53 16 1 Y 1 B THR 52 ? B THR 54 17 1 Y 1 B GLU 53 ? B GLU 55 18 1 Y 1 B ARG 54 ? B ARG 56 19 1 Y 1 B ILE 55 ? B ILE 57 20 1 Y 1 B GLU 56 ? B GLU 58 21 1 Y 1 B ASN 57 ? B ASN 59 22 1 Y 1 B LYS 58 ? B LYS 60 23 1 Y 1 B ASP 166 ? B ASP 168 24 1 Y 1 B SER 167 ? B SER 169 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MERCURY (II) ION' HG 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HG 1 201 201 HG HG A . D 2 HG 1 201 201 HG HG B . E 3 HOH 1 301 2 HOH HOH A . E 3 HOH 2 302 5 HOH HOH A . E 3 HOH 3 303 6 HOH HOH A . E 3 HOH 4 304 7 HOH HOH A . E 3 HOH 5 305 8 HOH HOH A . E 3 HOH 6 306 9 HOH HOH A . E 3 HOH 7 307 10 HOH HOH A . E 3 HOH 8 308 12 HOH HOH A . E 3 HOH 9 309 13 HOH HOH A . E 3 HOH 10 310 15 HOH HOH A . E 3 HOH 11 311 18 HOH HOH A . E 3 HOH 12 312 19 HOH HOH A . E 3 HOH 13 313 21 HOH HOH A . E 3 HOH 14 314 25 HOH HOH A . E 3 HOH 15 315 26 HOH HOH A . E 3 HOH 16 316 30 HOH HOH A . E 3 HOH 17 317 33 HOH HOH A . F 3 HOH 1 301 1 HOH HOH B . F 3 HOH 2 302 3 HOH HOH B . F 3 HOH 3 303 4 HOH HOH B . F 3 HOH 4 304 11 HOH HOH B . F 3 HOH 5 305 14 HOH HOH B . F 3 HOH 6 306 16 HOH HOH B . F 3 HOH 7 307 17 HOH HOH B . F 3 HOH 8 308 20 HOH HOH B . F 3 HOH 9 309 22 HOH HOH B . F 3 HOH 10 310 23 HOH HOH B . F 3 HOH 11 311 24 HOH HOH B . F 3 HOH 12 312 27 HOH HOH B . F 3 HOH 13 313 28 HOH HOH B . F 3 HOH 14 314 29 HOH HOH B . F 3 HOH 15 315 31 HOH HOH B . F 3 HOH 16 316 32 HOH HOH B . F 3 HOH 17 317 34 HOH HOH B . F 3 HOH 18 318 35 HOH HOH B . F 3 HOH 19 319 36 HOH HOH B . #