HEADER    TRANSFERASE                             27-MAR-12   4EDG              
TITLE     THE STRUCTURE OF THE S. AUREUS DNAG RNA POLYMERASE DOMAIN BOUND TO ATP
TITLE    2 AND MANGANESE                                                        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA PRIMASE;                                               
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 111-436;                                      
COMPND   5 EC: 2.7.7.-;                                                         
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS;                          
SOURCE   3 ORGANISM_TAXID: 1280;                                                
SOURCE   4 GENE: DNAG;                                                          
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON+;                          
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PET28B                                    
KEYWDS    CATALYTIC DOMAIN, NUCLEOSIDE TRIPHOSPHATE, NUCLEOSIDE POLYPHOSPHATE,  
KEYWDS   2 PROTEIN-LIGAND COMPLEX, TRANSFERASE                                  
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.U.RYMER,F.A.SOLORIO,C.CHU,J.E.CORN,J.D.WANG,J.M.BERGER              
REVDAT   4   13-SEP-23 4EDG    1       REMARK SEQADV LINK                       
REVDAT   3   10-JUL-13 4EDG    1       JRNL                                     
REVDAT   2   01-AUG-12 4EDG    1       TITLE                                    
REVDAT   1   25-JUL-12 4EDG    0                                                
JRNL        AUTH   R.U.RYMER,F.A.SOLORIO,A.K.TEHRANCHI,C.CHU,J.E.CORN,J.L.KECK, 
JRNL        AUTH 2 J.D.WANG,J.M.BERGER                                          
JRNL        TITL   BINDING MECHANISM OF METAL-NTP SUBSTRATES AND                
JRNL        TITL 2 STRINGENT-RESPONSE ALARMONES TO BACTERIAL DNAG-TYPE          
JRNL        TITL 3 PRIMASES.                                                    
JRNL        REF    STRUCTURE                     V.  20  1478 2012              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   22795082                                                     
JRNL        DOI    10.1016/J.STR.2012.05.017                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.7.3_928                                     
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 43.67                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.350                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 34480                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.163                           
REMARK   3   R VALUE            (WORKING SET) : 0.162                           
REMARK   3   FREE R VALUE                     : 0.197                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.940                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1705                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 43.6756 -  4.5838    0.99     2857   148  0.1561 0.1752        
REMARK   3     2  4.5838 -  3.6389    1.00     2787   130  0.1409 0.1681        
REMARK   3     3  3.6389 -  3.1790    1.00     2723   152  0.1683 0.2050        
REMARK   3     4  3.1790 -  2.8884    1.00     2757   137  0.1710 0.2125        
REMARK   3     5  2.8884 -  2.6814    1.00     2715   167  0.1624 0.2083        
REMARK   3     6  2.6814 -  2.5234    1.00     2734   132  0.1672 0.1941        
REMARK   3     7  2.5234 -  2.3970    1.00     2687   145  0.1616 0.2066        
REMARK   3     8  2.3970 -  2.2927    1.00     2711   151  0.1596 0.2018        
REMARK   3     9  2.2927 -  2.2044    1.00     2725   151  0.1626 0.2207        
REMARK   3    10  2.2044 -  2.1283    1.00     2709   135  0.1723 0.2253        
REMARK   3    11  2.1283 -  2.0618    1.00     2705   139  0.1801 0.2105        
REMARK   3    12  2.0618 -  2.0029    0.98     2665   118  0.2114 0.2658        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.20                                          
REMARK   3   SHRINKAGE RADIUS   : 0.98                                          
REMARK   3   K_SOL              : 0.33                                          
REMARK   3   B_SOL              : 46.33                                         
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.240            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.150           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 34.80                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 2.61710                                              
REMARK   3    B22 (A**2) : 2.61710                                              
REMARK   3    B33 (A**2) : -5.23420                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.008           2769                                  
REMARK   3   ANGLE     :  1.062           3757                                  
REMARK   3   CHIRALITY :  0.066            402                                  
REMARK   3   PLANARITY :  0.004            481                                  
REMARK   3   DIHEDRAL  : 13.809           1052                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 4                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESSEQ 108:233)                         
REMARK   3    ORIGIN FOR THE GROUP (A):  25.7354 -63.2181  -7.8824              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2456 T22:   0.1576                                     
REMARK   3      T33:   0.1082 T12:   0.1331                                     
REMARK   3      T13:  -0.0135 T23:  -0.0157                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.1963 L22:   0.9999                                     
REMARK   3      L33:   2.3865 L12:  -0.4759                                     
REMARK   3      L13:  -0.3513 L23:  -0.2981                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0187 S12:   0.0499 S13:  -0.0124                       
REMARK   3      S21:  -0.0041 S22:   0.0021 S23:   0.0354                       
REMARK   3      S31:   0.1956 S32:  -0.0638 S33:   0.0134                       
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESSEQ 234:343)                         
REMARK   3    ORIGIN FOR THE GROUP (A):  16.0761 -42.9050   1.6297              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1925 T22:   0.1737                                     
REMARK   3      T33:   0.1770 T12:   0.1049                                     
REMARK   3      T13:  -0.0368 T23:  -0.0629                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.2436 L22:   3.0522                                     
REMARK   3      L33:   0.5082 L12:  -0.6434                                     
REMARK   3      L13:  -0.3493 L23:   0.2252                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0427 S12:  -0.1001 S13:   0.1516                       
REMARK   3      S21:   0.0479 S22:  -0.0044 S23:  -0.0061                       
REMARK   3      S31:   0.0713 S32:   0.0800 S33:  -0.0143                       
REMARK   3   TLS GROUP : 3                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESSEQ 344:362)                         
REMARK   3    ORIGIN FOR THE GROUP (A):  22.2235 -32.3238 -11.2401              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.5427 T22:   0.3457                                     
REMARK   3      T33:   0.4169 T12:   0.0323                                     
REMARK   3      T13:   0.1010 T23:  -0.0468                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.1824 L22:   0.1167                                     
REMARK   3      L33:   0.0978 L12:   0.0300                                     
REMARK   3      L13:  -0.0123 L23:  -0.0849                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0609 S12:   0.3506 S13:   0.2671                       
REMARK   3      S21:  -0.5107 S22:   0.0641 S23:  -0.2729                       
REMARK   3      S31:  -0.4726 S32:   0.4190 S33:   0.0001                       
REMARK   3   TLS GROUP : 4                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESSEQ 363:428)                         
REMARK   3    ORIGIN FOR THE GROUP (A):  -0.6938 -25.2772   3.7241              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1950 T22:   0.1594                                     
REMARK   3      T33:   0.3283 T12:   0.0386                                     
REMARK   3      T13:  -0.0102 T23:  -0.0487                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.8798 L22:   1.4876                                     
REMARK   3      L33:   0.8225 L12:   0.1567                                     
REMARK   3      L13:   0.2062 L23:  -0.5520                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0177 S12:  -0.1896 S13:   0.2487                       
REMARK   3      S21:   0.1032 S22:   0.0333 S23:   0.1156                       
REMARK   3      S31:  -0.0177 S32:  -0.0569 S33:  -0.0006                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4EDG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-12.                  
REMARK 100 THE DEPOSITION ID IS D_1000071478.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 20-NOV-09                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ALS                                
REMARK 200  BEAMLINE                       : 8.3.1                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.115                              
REMARK 200  MONOCHROMATOR                  : DOUBLE FLAT CRYSTAL, SI(111)       
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315R                  
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : SCALA 3.3.20                       
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 34499                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.003                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 130.996                            
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.8                               
REMARK 200  DATA REDUNDANCY                : 5.400                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.04600                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 22.1000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.11                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 98.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.30                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.28700                            
REMARK 200  R SYM FOR SHELL            (I) : 0.28700                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.800                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHENIX AUTOMR                                         
REMARK 200 STARTING MODEL: PDB ENTRY 4E2K                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 63.60                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M SODIUM THIOCYANATE, 0.1M BIS       
REMARK 280  -TRIS, 13% PEG3350, 2% BENZAMIDINE, 2.5 MM ATP, 5 MM MNCL2, PH      
REMARK 280  6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+5/6                                            
REMARK 290       6555   X-Y,X,Z+1/6                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       12.88833            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       25.77667            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       19.33250            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       32.22083            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000        6.44417            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 300 REMARK: MONOMER                                                      
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLN A   429                                                      
REMARK 465     PHE A   430                                                      
REMARK 465     ASN A   431                                                      
REMARK 465     GLN A   432                                                      
REMARK 465     ALA A   433                                                      
REMARK 465     PRO A   434                                                      
REMARK 465     ALA A   435                                                      
REMARK 465     ASN A   436                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU A 193    CG   CD   OE1  OE2                                  
REMARK 470     PHE A 195    CG   CD1  CD2  CE1  CE2  CZ                         
REMARK 470     GLN A 407    CG   CD   OE1  NE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O2'  ATP A   503     O    HOH A   847              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A 165        2.54     82.59                                   
REMARK 500    HIS A 166       17.19   -141.75                                   
REMARK 500    ASN A 248       -0.09     80.36                                   
REMARK 500    ASN A 281       51.05    -93.43                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 504  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 310   OD2                                                    
REMARK 620 2 ASP A 343   OD2 111.3                                              
REMARK 620 3 ATP A 503   O2A  84.5 160.2                                        
REMARK 620 4 ATP A 503   O2B 152.9  89.1  72.4                                  
REMARK 620 5 ATP A 503   O2B 150.2  89.0  72.0   4.1                            
REMARK 620 6 ATP A 503   O2A  88.7 159.7  16.2  73.1  74.0                      
REMARK 620 7 HOH A 760   O    85.0  81.9  88.0  80.4  76.3 104.0                
REMARK 620 8 HOH A 829   O    85.8 102.2  90.4 107.8 111.8  75.1 170.8          
REMARK 620 N                    1     2     3     4     5     6     7           
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 505  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 343   OD2                                                    
REMARK 620 2 ATP A 503   O3G 167.3                                              
REMARK 620 3 ATP A 503   O3G 162.3   5.5                                        
REMARK 620 4 ATP A 503   O2B  86.4  80.9  75.9                                  
REMARK 620 5 ATP A 503   O2B  86.1  81.4  76.2   4.0                            
REMARK 620 6 HOH A 781   O    91.7  88.6  91.5  99.3 103.3                      
REMARK 620 7 HOH A 782   O   102.9  89.7  94.2 163.7 160.5  93.8                
REMARK 620 8 HOH A 793   O    77.8 101.2  98.0  78.4  74.5 169.3  90.5          
REMARK 620 N                    1     2     3     4     5     6     7           
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 506  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HOH A 776   O                                                      
REMARK 620 2 HOH A 849   O   108.9                                              
REMARK 620 3 HOH A 902   O    87.9 108.5                                        
REMARK 620 N                    1     2                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 501                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 502                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 503                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 504                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 505                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 506                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4E2K   RELATED DB: PDB                                   
REMARK 900 APO PROTEIN                                                          
REMARK 900 RELATED ID: 4EDK   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4EDR   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4EDT   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4EDV   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4EE1   RELATED DB: PDB                                   
DBREF  4EDG A  111   436  UNP    O05338   PRIM_STAAU     111    436             
SEQADV 4EDG SER A  108  UNP  O05338              EXPRESSION TAG                 
SEQADV 4EDG ASN A  109  UNP  O05338              EXPRESSION TAG                 
SEQADV 4EDG ALA A  110  UNP  O05338              EXPRESSION TAG                 
SEQRES   1 A  329  SER ASN ALA ASP ASP LEU GLN MET ILE GLU MET HIS GLU          
SEQRES   2 A  329  LEU ILE GLN GLU PHE TYR TYR TYR ALA LEU THR LYS THR          
SEQRES   3 A  329  VAL GLU GLY GLU GLN ALA LEU THR TYR LEU GLN GLU ARG          
SEQRES   4 A  329  GLY PHE THR ASP ALA LEU ILE LYS GLU ARG GLY ILE GLY          
SEQRES   5 A  329  PHE ALA PRO ASP SER SER HIS PHE CYS HIS ASP PHE LEU          
SEQRES   6 A  329  GLN LYS LYS GLY TYR ASP ILE GLU LEU ALA TYR GLU ALA          
SEQRES   7 A  329  GLY LEU LEU SER ARG ASN GLU GLU ASN PHE SER TYR TYR          
SEQRES   8 A  329  ASP ARG PHE ARG ASN ARG ILE MET PHE PRO LEU LYS ASN          
SEQRES   9 A  329  ALA GLN GLY ARG ILE VAL GLY TYR SER GLY ARG THR TYR          
SEQRES  10 A  329  THR GLY GLN GLU PRO LYS TYR LEU ASN SER PRO GLU THR          
SEQRES  11 A  329  PRO ILE PHE GLN LYS ARG LYS LEU LEU TYR ASN LEU ASP          
SEQRES  12 A  329  LYS ALA ARG LYS SER ILE ARG LYS LEU ASP GLU ILE VAL          
SEQRES  13 A  329  LEU LEU GLU GLY PHE MET ASP VAL ILE LYS SER ASP THR          
SEQRES  14 A  329  ALA GLY LEU LYS ASN VAL VAL ALA THR MET GLY THR GLN          
SEQRES  15 A  329  LEU SER ASP GLU HIS ILE THR PHE ILE ARG LYS LEU THR          
SEQRES  16 A  329  SER ASN ILE THR LEU MET PHE ASP GLY ASP PHE ALA GLY          
SEQRES  17 A  329  SER GLU ALA THR LEU LYS THR GLY GLN HIS LEU LEU GLN          
SEQRES  18 A  329  GLN GLY LEU ASN VAL PHE VAL ILE GLN LEU PRO SER GLY          
SEQRES  19 A  329  MET ASP PRO ASP GLU TYR ILE GLY LYS TYR GLY ASN ASP          
SEQRES  20 A  329  ALA PHE THR THR PHE VAL LYS ASN ASP LYS LYS SER PHE          
SEQRES  21 A  329  ALA HIS TYR LYS VAL SER ILE LEU LYS ASP GLU ILE ALA          
SEQRES  22 A  329  HIS ASN ASP LEU SER TYR GLU ARG TYR LEU LYS GLU LEU          
SEQRES  23 A  329  SER HIS ASP ILE SER LEU MET LYS SER SER ILE LEU GLN          
SEQRES  24 A  329  GLN LYS ALA ILE ASN ASP VAL ALA PRO PHE PHE ASN VAL          
SEQRES  25 A  329  SER PRO GLU GLN LEU ALA ASN GLU ILE GLN PHE ASN GLN          
SEQRES  26 A  329  ALA PRO ALA ASN                                              
HET    BEN  A 501       9                                                       
HET    BEN  A 502       9                                                       
HET    ATP  A 503      62                                                       
HET     MN  A 504       1                                                       
HET     MN  A 505       1                                                       
HET     MN  A 506       1                                                       
HETNAM     BEN BENZAMIDINE                                                      
HETNAM     ATP ADENOSINE-5'-TRIPHOSPHATE                                        
HETNAM      MN MANGANESE (II) ION                                               
FORMUL   2  BEN    2(C7 H8 N2)                                                  
FORMUL   4  ATP    C10 H16 N5 O13 P3                                            
FORMUL   5   MN    3(MN 2+)                                                     
FORMUL   8  HOH   *350(H2 O)                                                    
HELIX    1   1 SER A  108  THR A  133  1                                  26    
HELIX    2   2 GLY A  136  ARG A  146  1                                  11    
HELIX    3   3 THR A  149  GLY A  157  1                                   9    
HELIX    4   4 HIS A  166  LYS A  175  1                                  10    
HELIX    5   5 ASP A  178  ALA A  185  1                                   8    
HELIX    6   6 ASN A  248  ASP A  260  1                                  13    
HELIX    7   7 GLY A  267  GLY A  278  1                                  12    
HELIX    8   8 SER A  291  THR A  302  1                                  12    
HELIX    9   9 ASP A  312  GLN A  329  1                                  18    
HELIX   10  10 ASP A  343  GLY A  352  1                                  10    
HELIX   11  11 GLY A  352  ASP A  363  1                                  12    
HELIX   12  12 PHE A  367  LEU A  375  1                                   9    
HELIX   13  13 LEU A  375  ASN A  382  1                                   8    
HELIX   14  14 ASN A  382  MET A  400  1                                  19    
HELIX   15  15 SER A  402  ALA A  414  1                                  13    
HELIX   16  16 PRO A  415  ASN A  418  5                                   4    
HELIX   17  17 SER A  420  ILE A  428  1                                   9    
SHEET    1   A 4 GLY A 159  ALA A 161  0                                        
SHEET    2   A 4 ARG A 204  LYS A 210 -1  O  ARG A 204   N  ALA A 161           
SHEET    3   A 4 ILE A 216  ARG A 222 -1  O  ARG A 222   N  ILE A 205           
SHEET    4   A 4 TYR A 231  ASN A 233 -1  O  LEU A 232   N  GLY A 221           
SHEET    1   B 2 LEU A 188  ASN A 191  0                                        
SHEET    2   B 2 SER A 196  ASP A 199 -1  O  TYR A 198   N  SER A 189           
SHEET    1   C 5 VAL A 282  VAL A 283  0                                        
SHEET    2   C 5 ILE A 262  LEU A 264  1  N  VAL A 263   O  VAL A 283           
SHEET    3   C 5 ASN A 304  LEU A 307  1  O  THR A 306   N  LEU A 264           
SHEET    4   C 5 ASN A 332  VAL A 335  1  O  PHE A 334   N  LEU A 307           
SHEET    5   C 5 LYS A 365  SER A 366 -1  O  LYS A 365   N  VAL A 335           
LINK         OD2 ASP A 310                MN    MN A 504     1555   1555  2.48  
LINK         OD2 ASP A 343                MN    MN A 504     1555   1555  2.32  
LINK         OD2 ASP A 343                MN    MN A 505     1555   1555  2.35  
LINK         O2ABATP A 503                MN    MN A 504     1555   1555  2.42  
LINK         O2BAATP A 503                MN    MN A 504     1555   1555  2.45  
LINK         O2BBATP A 503                MN    MN A 504     1555   1555  2.47  
LINK         O2AAATP A 503                MN    MN A 504     1555   1555  2.48  
LINK         O3GAATP A 503                MN    MN A 505     1555   1555  2.37  
LINK         O3GBATP A 503                MN    MN A 505     1555   1555  2.38  
LINK         O2BAATP A 503                MN    MN A 505     1555   1555  2.53  
LINK         O2BBATP A 503                MN    MN A 505     1555   1555  2.56  
LINK        MN    MN A 504                 O   HOH A 760     1555   1555  2.52  
LINK        MN    MN A 504                 O   HOH A 829     1555   1555  2.31  
LINK        MN    MN A 505                 O   HOH A 781     1555   1555  2.41  
LINK        MN    MN A 505                 O   HOH A 782     1555   1555  2.38  
LINK        MN    MN A 505                 O   HOH A 793     1555   1555  2.43  
LINK        MN    MN A 506                 O   HOH A 776     1555   1555  2.48  
LINK        MN    MN A 506                 O   HOH A 849     1555   1555  2.53  
LINK        MN    MN A 506                 O   HOH A 902     1555   1555  1.95  
CISPEP   1 GLU A  228    PRO A  229          0        -2.56                     
SITE     1 AC1  6 GLU A 117  PHE A 125  TYR A 128  VAL A 134                    
SITE     2 AC1  6 HOH A 694  HOH A 753                                          
SITE     1 AC2  6 GLN A 289  LEU A 290  ASP A 292  LYS A 321                    
SITE     2 AC2  6 HIS A 325  HOH A 789                                          
SITE     1 AC3 25 ARG A 146  ARG A 222  PRO A 229  LYS A 230                    
SITE     2 AC3 25 TYR A 231  GLU A 266  GLY A 267  PHE A 268                    
SITE     3 AC3 25 MET A 269  GLY A 287  ASP A 310  ASP A 343                    
SITE     4 AC3 25  MN A 504   MN A 505  HOH A 620  HOH A 656                    
SITE     5 AC3 25 HOH A 704  HOH A 760  HOH A 781  HOH A 793                    
SITE     6 AC3 25 HOH A 811  HOH A 829  HOH A 847  HOH A 866                    
SITE     7 AC3 25 HOH A 902                                                     
SITE     1 AC4  6 ASP A 310  ASP A 343  ATP A 503   MN A 505                    
SITE     2 AC4  6 HOH A 760  HOH A 829                                          
SITE     1 AC5  6 ASP A 343  ATP A 503   MN A 504  HOH A 781                    
SITE     2 AC5  6 HOH A 782  HOH A 793                                          
SITE     1 AC6  5 ASP A 310  ASP A 312  HOH A 776  HOH A 849                    
SITE     2 AC6  5 HOH A 902                                                     
CRYST1  151.261  151.261   38.665  90.00  90.00 120.00 P 61          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.006611  0.003817  0.000000        0.00000                         
SCALE2      0.000000  0.007634  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.025863        0.00000