HEADER TRANSFERASE 29-MAR-12 4EFI TITLE CRYSTAL STRUCTURE OF 3-OXOACYL-(ACYL-CARRIER PROTEIN) SYNTHASE FROM TITLE 2 BURKHOLDERIA XENOVORANS LB400 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-(ACYL-CARRIER PROTEIN) SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.3.1.41; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA XENOVORANS; SOURCE 3 ORGANISM_TAXID: 266265; SOURCE 4 STRAIN: LB400; SOURCE 5 GENE: BXENO_A4297, BXE_A0096; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, SSGCID, ACYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,T.K.CRAIG, AUTHOR 2 J.ABENDROTH,B.STAKER,L.STEWART,SEATTLE STRUCTURAL GENOMICS CENTER AUTHOR 3 FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 13-SEP-23 4EFI 1 REMARK REVDAT 3 15-NOV-17 4EFI 1 REMARK REVDAT 2 09-OCT-13 4EFI 1 JRNL REVDAT 1 11-APR-12 4EFI 0 JRNL AUTH L.BAUGH,L.A.GALLAGHER,R.PATRAPUVICH,M.C.CLIFTON, JRNL AUTH 2 A.S.GARDBERG,T.E.EDWARDS,B.ARMOUR,D.W.BEGLEY,S.H.DIETERICH, JRNL AUTH 3 D.M.DRANOW,J.ABENDROTH,J.W.FAIRMAN,D.FOX,B.L.STAKER,I.PHAN, JRNL AUTH 4 A.GILLESPIE,R.CHOI,S.NAKAZAWA-HEWITT,M.T.NGUYEN,A.NAPULI, JRNL AUTH 5 L.BARRETT,G.W.BUCHKO,R.STACY,P.J.MYLER,L.J.STEWART,C.MANOIL, JRNL AUTH 6 W.C.VAN VOORHIS JRNL TITL COMBINING FUNCTIONAL AND STRUCTURAL GENOMICS TO SAMPLE THE JRNL TITL 2 ESSENTIAL BURKHOLDERIA STRUCTOME. JRNL REF PLOS ONE V. 8 53851 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23382856 JRNL DOI 10.1371/JOURNAL.PONE.0053851 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 69575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 3473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.1540 - 3.9456 0.93 2588 132 0.1726 0.1764 REMARK 3 2 3.9456 - 3.1324 0.88 2393 123 0.1661 0.1662 REMARK 3 3 3.1324 - 2.7366 0.99 2661 138 0.1523 0.1672 REMARK 3 4 2.7366 - 2.4865 1.00 2688 143 0.1500 0.1549 REMARK 3 5 2.4865 - 2.3083 1.00 2686 141 0.1465 0.1648 REMARK 3 6 2.3083 - 2.1722 0.98 2663 140 0.1500 0.1730 REMARK 3 7 2.1722 - 2.0634 1.00 2677 142 0.1468 0.1628 REMARK 3 8 2.0634 - 1.9736 1.00 2697 142 0.1483 0.1538 REMARK 3 9 1.9736 - 1.8977 1.00 2668 141 0.1595 0.1919 REMARK 3 10 1.8977 - 1.8322 1.00 2676 141 0.1560 0.1596 REMARK 3 11 1.8322 - 1.7749 1.00 2670 141 0.1454 0.1947 REMARK 3 12 1.7749 - 1.7242 1.00 2691 141 0.1505 0.1869 REMARK 3 13 1.7242 - 1.6788 1.00 2676 141 0.1474 0.1777 REMARK 3 14 1.6788 - 1.6378 1.00 2676 140 0.1497 0.1634 REMARK 3 15 1.6378 - 1.6006 1.00 2631 139 0.1491 0.1684 REMARK 3 16 1.6006 - 1.5665 1.00 2727 143 0.1537 0.1656 REMARK 3 17 1.5665 - 1.5352 1.00 2687 142 0.1506 0.1824 REMARK 3 18 1.5352 - 1.5062 1.00 2656 140 0.1562 0.1636 REMARK 3 19 1.5062 - 1.4793 1.00 2632 138 0.1699 0.2101 REMARK 3 20 1.4793 - 1.4542 1.00 2684 142 0.1729 0.2162 REMARK 3 21 1.4542 - 1.4308 1.00 2659 140 0.1850 0.2161 REMARK 3 22 1.4308 - 1.4088 1.00 2652 140 0.1944 0.1965 REMARK 3 23 1.4088 - 1.3880 0.99 2687 141 0.2051 0.2325 REMARK 3 24 1.3880 - 1.3685 0.96 2523 134 0.2205 0.2344 REMARK 3 25 1.3685 - 1.3500 0.91 2454 128 0.2342 0.2841 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 48.76 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36860 REMARK 3 B22 (A**2) : -0.71920 REMARK 3 B33 (A**2) : 0.35060 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.45280 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2757 REMARK 3 ANGLE : 1.311 3775 REMARK 3 CHIRALITY : 0.077 435 REMARK 3 PLANARITY : 0.007 505 REMARK 3 DIHEDRAL : 11.396 988 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 8:26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5963 -11.5220 20.7344 REMARK 3 T TENSOR REMARK 3 T11: 0.1386 T22: 0.1215 REMARK 3 T33: 0.1066 T12: -0.0038 REMARK 3 T13: -0.0117 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.3957 L22: 1.5248 REMARK 3 L33: 0.5428 L12: -0.9325 REMARK 3 L13: -0.1714 L23: 0.1282 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: 0.0369 S13: -0.2887 REMARK 3 S21: -0.0436 S22: -0.0062 S23: 0.0727 REMARK 3 S31: 0.0779 S32: 0.0512 S33: -0.0361 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 27:55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.4173 19.2983 5.8525 REMARK 3 T TENSOR REMARK 3 T11: 0.2210 T22: 0.1885 REMARK 3 T33: 0.1833 T12: 0.0082 REMARK 3 T13: -0.0310 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 1.0354 L22: 0.8003 REMARK 3 L33: 4.5490 L12: 0.1577 REMARK 3 L13: -1.6678 L23: -0.8323 REMARK 3 S TENSOR REMARK 3 S11: 0.0707 S12: 0.1358 S13: 0.1566 REMARK 3 S21: -0.1431 S22: -0.0878 S23: 0.0383 REMARK 3 S31: -0.4541 S32: 0.0637 S33: 0.0337 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 56:178 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3271 2.6668 26.4127 REMARK 3 T TENSOR REMARK 3 T11: 0.0889 T22: 0.1246 REMARK 3 T33: 0.1198 T12: -0.0070 REMARK 3 T13: 0.0072 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.5270 L22: 0.6472 REMARK 3 L33: 0.8169 L12: -0.1775 REMARK 3 L13: 0.2182 L23: -0.1413 REMARK 3 S TENSOR REMARK 3 S11: 0.0198 S12: 0.0086 S13: 0.0105 REMARK 3 S21: -0.0128 S22: -0.0248 S23: 0.0017 REMARK 3 S31: -0.0344 S32: 0.0282 S33: 0.0080 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 179:237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5462 5.5553 18.8806 REMARK 3 T TENSOR REMARK 3 T11: 0.1217 T22: 0.1394 REMARK 3 T33: 0.1031 T12: 0.0088 REMARK 3 T13: 0.0054 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 1.0912 L22: 0.6188 REMARK 3 L33: 0.9816 L12: -0.1707 REMARK 3 L13: 0.0073 L23: -0.0268 REMARK 3 S TENSOR REMARK 3 S11: -0.0136 S12: 0.1159 S13: 0.0892 REMARK 3 S21: -0.0979 S22: -0.0149 S23: -0.0825 REMARK 3 S31: -0.0869 S32: 0.0990 S33: 0.0218 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 238:260 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.1803 -4.7880 5.6282 REMARK 3 T TENSOR REMARK 3 T11: 0.2335 T22: 0.2257 REMARK 3 T33: 0.1576 T12: 0.0398 REMARK 3 T13: 0.0259 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 0.9582 L22: 7.8604 REMARK 3 L33: 1.4488 L12: 0.4517 REMARK 3 L13: 0.2603 L23: -0.3370 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: 0.2555 S13: -0.1047 REMARK 3 S21: -0.8178 S22: -0.0419 S23: -0.3627 REMARK 3 S31: 0.0518 S32: 0.1260 S33: 0.0122 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 261:297 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2578 -5.2677 3.0983 REMARK 3 T TENSOR REMARK 3 T11: 0.1930 T22: 0.2037 REMARK 3 T33: 0.1190 T12: 0.0324 REMARK 3 T13: -0.0154 T23: -0.0409 REMARK 3 L TENSOR REMARK 3 L11: 1.5061 L22: 2.5369 REMARK 3 L33: 1.6663 L12: -0.4224 REMARK 3 L13: 0.1384 L23: 0.6340 REMARK 3 S TENSOR REMARK 3 S11: 0.0818 S12: 0.3225 S13: -0.1421 REMARK 3 S21: -0.4100 S22: -0.0760 S23: -0.0082 REMARK 3 S31: 0.1006 S32: 0.0067 S33: 0.0032 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 298:358 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2328 -3.5459 14.3721 REMARK 3 T TENSOR REMARK 3 T11: 0.1359 T22: 0.1394 REMARK 3 T33: 0.1208 T12: 0.0038 REMARK 3 T13: -0.0206 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.7015 L22: 0.8979 REMARK 3 L33: 0.6635 L12: -0.3625 REMARK 3 L13: -0.1714 L23: -0.0380 REMARK 3 S TENSOR REMARK 3 S11: 0.0660 S12: 0.0765 S13: -0.0589 REMARK 3 S21: -0.0760 S22: -0.0328 S23: 0.1057 REMARK 3 S31: 0.0504 S32: -0.0672 S33: -0.0326 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EFI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071552. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97740 REMARK 200 MONOCHROMATOR : SI(220) ASYMMETRIC CUT SINGLE REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78305 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.61000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.4.0 REMARK 200 STARTING MODEL: PDB ENTRY 4DFE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS FROM REMARK 280 BUXEA.00171.A.A1.PW33644 SET UP AT 26.35MG/ML, .4/.4 UL DROPS AT REMARK 280 16C. CRYSTALS WERE FOUND IN CONDITION: 20% PEG 2000MME, 100MM REMARK 280 TRIS PH 8.5, 200MM TRIMETHYLAMINE N-OXIDE CRYOPROTECTED WITH REMARK 280 WELL SOLUTION +20% ETHYLENE GLYCOL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.68850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.20400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.68850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.20400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -14.48049 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 59.08752 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 840 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 7 OG REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 ARG A 42 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 44 CG OD1 OD2 REMARK 470 MET A 54 CG SD CE REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 ASN A 189 CG OD1 ND2 REMARK 470 ASP A 191 CG OD1 OD2 REMARK 470 GLU A 224 CG CD OE1 OE2 REMARK 470 LYS A 229 CG CD CE NZ REMARK 470 LEU A 246 CG CD1 CD2 REMARK 470 ASN A 247 CG OD1 ND2 REMARK 470 LYS A 251 CG CD CE NZ REMARK 470 ASP A 263 CG OD1 OD2 REMARK 470 LYS A 281 CG CD CE NZ REMARK 470 LYS A 286 CG CD CE NZ REMARK 470 LYS A 323 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 306 -138.62 54.28 REMARK 500 SER A 306 -135.96 54.28 REMARK 500 VAL A 336 130.90 -38.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DFE RELATED DB: PDB REMARK 900 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III FROM BURKHOLDERIA REMARK 900 XENOVORANS LB400 REMARK 900 RELATED ID: BUXEA.00171.A RELATED DB: TARGETTRACK DBREF 4EFI A 1 358 UNP Q13SV4 Q13SV4_BURXL 1 354 SEQRES 1 A 354 MET SER SER PRO ASP PHE SER ALA GLY ARG GLU LEU ARG SEQRES 2 A 354 THR GLN GLY ALA ARG ILE ALA GLY VAL VAL SER CYS VAL SEQRES 3 A 354 PRO SER LYS GLN VAL ASP ASN ASP TYR PHE VAL GLU ARG SEQRES 4 A 354 PHE ASP ALA SER ALA VAL ARG ASP VAL VAL LYS MET ILE SEQRES 5 A 354 GLY VAL ASN ARG ARG ARG TRP ALA ASP ALA GLN THR SER SEQRES 6 A 354 ALA GLY ASP LEU CYS ARG LYS ALA GLY GLU LYS LEU LEU SEQRES 7 A 354 ALA GLY LEU GLY TRP GLN ALA ASP SER ILE ASP ALA LEU SEQRES 8 A 354 ILE PHE VAL SER GLN THR PRO ASN TYR ARG LEU PRO ALA SEQRES 9 A 354 THR ALA PHE VAL LEU GLN ALA GLU LEU ASP LEU PRO ALA SEQRES 10 A 354 SER CYS LEU ALA LEU ASP ILE ASN LEU GLY CYS SER GLY SEQRES 11 A 354 TYR PRO GLN ALA LEU TRP LEU GLY MET ASN LEU ILE GLN SEQRES 12 A 354 THR GLY ALA ALA LYS ARG VAL LEU LEU ALA VAL GLY ASP SEQRES 13 A 354 THR ILE SER LYS MET ILE ASP PRO THR ASP ARG SER THR SEQRES 14 A 354 SER LEU LEU PHE GLY ASP ALA GLY THR MET THR ALA LEU SEQRES 15 A 354 GLU THR SER ASN GLY ASP ALA ALA ALA HIS PHE ILE ILE SEQRES 16 A 354 GLY ALA ASP GLY LYS GLY ALA ARG ASN LEU ILE VAL PRO SEQRES 17 A 354 SER GLY GLY PHE LYS PRO TYR ASP ALA ALA ALA ASP GLU SEQRES 18 A 354 ARG MET ALA GLY LYS SER PRO GLU CYS LEU PHE MET ASP SEQRES 19 A 354 GLY GLY GLU ILE PHE ASN PHE THR LEU ASN ALA VAL PRO SEQRES 20 A 354 LYS LEU VAL SER ARG THR LEU ASP ILE ALA GLY ARG ASP SEQRES 21 A 354 LYS ASP SER TYR ASP ALA PHE LEU PHE HIS GLN ALA ASN SEQRES 22 A 354 LEU PHE MET LEU LYS HIS LEU ALA LYS LYS ALA GLY LEU SEQRES 23 A 354 PRO ALA GLU ARG VAL PRO VAL ASN ILE GLY GLU TYR GLY SEQRES 24 A 354 ASN THR SER CYS ALA SER ILE PRO LEU LEU ILE THR THR SEQRES 25 A 354 GLU LEU LYS ASP ARG LEU LYS GLU GLU THR LEU GLN LEU SEQRES 26 A 354 GLY MET PHE GLY PHE GLY VAL GLY TYR SER TRP ALA SER SEQRES 27 A 354 ALA ALA LEU ALA VAL GLY PRO LEU ASN ILE VAL ASP THR SEQRES 28 A 354 ILE GLU THR HET UNL A 401 1 HET CL A 402 1 HET FMT A 403 4 HETNAM UNL UNKNOWN LIGAND HETNAM CL CHLORIDE ION HETNAM FMT FORMIC ACID FORMUL 3 CL CL 1- FORMUL 4 FMT C H2 O2 FORMUL 5 HOH *346(H2 O) HELIX 1 1 ASP A 34 VAL A 40 5 4 HELIX 2 2 ASP A 44 GLY A 56 1 13 HELIX 3 3 SER A 68 GLY A 85 1 18 HELIX 4 4 GLN A 87 ILE A 91 5 5 HELIX 5 5 ALA A 107 LEU A 116 1 10 HELIX 6 6 SER A 132 THR A 147 1 16 HELIX 7 7 THR A 160 ILE A 165 5 6 HELIX 8 8 ASP A 169 LEU A 174 1 6 HELIX 9 9 GLY A 202 ARG A 206 5 5 HELIX 10 10 ASP A 219 ALA A 227 5 9 HELIX 11 11 ASP A 237 GLY A 261 1 25 HELIX 12 12 ASP A 263 TYR A 267 5 5 HELIX 13 13 ASN A 276 ALA A 288 1 12 HELIX 14 14 PRO A 291 VAL A 295 5 5 HELIX 15 15 ASN A 298 GLY A 303 1 6 HELIX 16 16 THR A 305 CYS A 307 5 3 HELIX 17 17 ALA A 308 LEU A 318 1 11 HELIX 18 18 LEU A 318 GLU A 325 1 8 SHEET 1 A 5 ARG A 10 GLN A 15 0 SHEET 2 A 5 ALA A 193 ALA A 200 -1 O PHE A 196 N LEU A 12 SHEET 3 A 5 SER A 339 VAL A 347 -1 O TRP A 340 N GLY A 199 SHEET 4 A 5 LEU A 327 GLY A 335 -1 N LEU A 327 O VAL A 347 SHEET 5 A 5 ALA A 269 PHE A 272 1 N LEU A 271 O GLY A 330 SHEET 1 B 6 LEU A 123 ILE A 127 0 SHEET 2 B 6 ALA A 93 VAL A 97 1 N PHE A 96 O LEU A 125 SHEET 3 B 6 ARG A 152 ASP A 159 1 O ALA A 156 N ILE A 95 SHEET 4 B 6 ALA A 179 THR A 187 -1 O THR A 183 N LEU A 155 SHEET 5 B 6 ALA A 17 VAL A 26 -1 N CYS A 25 O GLY A 180 SHEET 6 B 6 VAL A 353 GLU A 357 1 O ILE A 356 N SER A 24 SHEET 1 C 2 GLN A 30 ASP A 32 0 SHEET 2 C 2 ARG A 59 ARG A 61 -1 O ARG A 60 N VAL A 31 SHEET 1 D 2 LEU A 208 ILE A 209 0 SHEET 2 D 2 PHE A 235 MET A 236 -1 O PHE A 235 N ILE A 209 CISPEP 1 LEU A 105 PRO A 106 0 -2.00 CISPEP 2 GLY A 337 TYR A 338 0 -8.87 CISPEP 3 GLY A 348 PRO A 349 0 1.86 SITE 1 AC1 5 ARG A 49 VAL A 52 ARG A 294 HOH A 720 SITE 2 AC1 5 HOH A 820 SITE 1 AC2 4 GLY A 16 SER A 188 GLY A 190 ALA A 192 CRYST1 101.377 54.408 60.836 90.00 103.77 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009864 0.000000 0.002417 0.00000 SCALE2 0.000000 0.018380 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016924 0.00000