data_4EFO # _entry.id 4EFO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4EFO pdb_00004efo 10.2210/pdb4efo/pdb RCSB RCSB071558 ? ? WWPDB D_1000071558 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-27 2 'Structure model' 1 1 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4EFO _pdbx_database_status.recvd_initial_deposition_date 2012-03-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, J.' 1 'Li, J.' 2 'Miyahira, A.' 3 'Sun, J.' 4 'Liu, Y.' 5 'Cheng, G.' 6 'Liang, H.' 7 # _citation.id primary _citation.title 'Crystal structure of the ubiquitin-like domain of human TBK1.' _citation.journal_abbrev 'Protein Cell' _citation.journal_volume 3 _citation.page_first 383 _citation.page_last 391 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country CN _citation.journal_id_ISSN 1674-800X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22610919 _citation.pdbx_database_id_DOI 10.1007/s13238-012-2929-1 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, J.' 1 ? primary 'Li, J.' 2 ? primary 'Miyahira, A.' 3 ? primary 'Sun, J.' 4 ? primary 'Liu, Y.' 5 ? primary 'Cheng, G.' 6 ? primary 'Liang, H.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Serine/threonine-protein kinase TBK1' 10941.543 2 2.7.11.1 ? 'ubiquitin-like domain, UNP RESIDUE 302-383' ? 2 water nat water 18.015 214 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NF-kappa-B-activating kinase, T2K, TANK-binding kinase 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSTSDILHRMVIHVFSLQQMTAHKIYIHSYNTATIFHELVYKQTKIISSNQELIYEGRRLVLEPGRLAQHFPKTTEE NPIFVVSLERPHRD ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSTSDILHRMVIHVFSLQQMTAHKIYIHSYNTATIFHELVYKQTKIISSNQELIYEGRRLVLEPGRLAQHFPKTTEE NPIFVVSLERPHRD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 THR n 1 7 SER n 1 8 ASP n 1 9 ILE n 1 10 LEU n 1 11 HIS n 1 12 ARG n 1 13 MET n 1 14 VAL n 1 15 ILE n 1 16 HIS n 1 17 VAL n 1 18 PHE n 1 19 SER n 1 20 LEU n 1 21 GLN n 1 22 GLN n 1 23 MET n 1 24 THR n 1 25 ALA n 1 26 HIS n 1 27 LYS n 1 28 ILE n 1 29 TYR n 1 30 ILE n 1 31 HIS n 1 32 SER n 1 33 TYR n 1 34 ASN n 1 35 THR n 1 36 ALA n 1 37 THR n 1 38 ILE n 1 39 PHE n 1 40 HIS n 1 41 GLU n 1 42 LEU n 1 43 VAL n 1 44 TYR n 1 45 LYS n 1 46 GLN n 1 47 THR n 1 48 LYS n 1 49 ILE n 1 50 ILE n 1 51 SER n 1 52 SER n 1 53 ASN n 1 54 GLN n 1 55 GLU n 1 56 LEU n 1 57 ILE n 1 58 TYR n 1 59 GLU n 1 60 GLY n 1 61 ARG n 1 62 ARG n 1 63 LEU n 1 64 VAL n 1 65 LEU n 1 66 GLU n 1 67 PRO n 1 68 GLY n 1 69 ARG n 1 70 LEU n 1 71 ALA n 1 72 GLN n 1 73 HIS n 1 74 PHE n 1 75 PRO n 1 76 LYS n 1 77 THR n 1 78 THR n 1 79 GLU n 1 80 GLU n 1 81 ASN n 1 82 PRO n 1 83 ILE n 1 84 PHE n 1 85 VAL n 1 86 VAL n 1 87 SER n 1 88 LEU n 1 89 GLU n 1 90 ARG n 1 91 PRO n 1 92 HIS n 1 93 ARG n 1 94 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TBK1, NAK' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 297 ? ? ? A . n A 1 2 PRO 2 298 298 PRO PRO A . n A 1 3 LEU 3 299 299 LEU LEU A . n A 1 4 GLY 4 300 300 GLY GLY A . n A 1 5 SER 5 301 301 SER SER A . n A 1 6 THR 6 302 302 THR THR A . n A 1 7 SER 7 303 303 SER SER A . n A 1 8 ASP 8 304 304 ASP ASP A . n A 1 9 ILE 9 305 305 ILE ILE A . n A 1 10 LEU 10 306 306 LEU LEU A . n A 1 11 HIS 11 307 307 HIS HIS A . n A 1 12 ARG 12 308 308 ARG ARG A . n A 1 13 MET 13 309 309 MET MET A . n A 1 14 VAL 14 310 310 VAL VAL A . n A 1 15 ILE 15 311 311 ILE ILE A . n A 1 16 HIS 16 312 312 HIS HIS A . n A 1 17 VAL 17 313 313 VAL VAL A . n A 1 18 PHE 18 314 314 PHE PHE A . n A 1 19 SER 19 315 315 SER SER A . n A 1 20 LEU 20 316 316 LEU LEU A . n A 1 21 GLN 21 317 317 GLN GLN A . n A 1 22 GLN 22 318 318 GLN GLN A . n A 1 23 MET 23 319 319 MET MET A . n A 1 24 THR 24 320 320 THR THR A . n A 1 25 ALA 25 321 321 ALA ALA A . n A 1 26 HIS 26 322 322 HIS HIS A . n A 1 27 LYS 27 323 323 LYS LYS A . n A 1 28 ILE 28 324 324 ILE ILE A . n A 1 29 TYR 29 325 325 TYR TYR A . n A 1 30 ILE 30 326 326 ILE ILE A . n A 1 31 HIS 31 327 327 HIS HIS A . n A 1 32 SER 32 328 328 SER SER A . n A 1 33 TYR 33 329 329 TYR TYR A . n A 1 34 ASN 34 330 330 ASN ASN A . n A 1 35 THR 35 331 331 THR THR A . n A 1 36 ALA 36 332 332 ALA ALA A . n A 1 37 THR 37 333 333 THR THR A . n A 1 38 ILE 38 334 334 ILE ILE A . n A 1 39 PHE 39 335 335 PHE PHE A . n A 1 40 HIS 40 336 336 HIS HIS A . n A 1 41 GLU 41 337 337 GLU GLU A . n A 1 42 LEU 42 338 338 LEU LEU A . n A 1 43 VAL 43 339 339 VAL VAL A . n A 1 44 TYR 44 340 340 TYR TYR A . n A 1 45 LYS 45 341 341 LYS LYS A . n A 1 46 GLN 46 342 342 GLN GLN A . n A 1 47 THR 47 343 343 THR THR A . n A 1 48 LYS 48 344 344 LYS LYS A . n A 1 49 ILE 49 345 345 ILE ILE A . n A 1 50 ILE 50 346 346 ILE ILE A . n A 1 51 SER 51 347 347 SER SER A . n A 1 52 SER 52 348 348 SER SER A . n A 1 53 ASN 53 349 349 ASN ASN A . n A 1 54 GLN 54 350 350 GLN GLN A . n A 1 55 GLU 55 351 351 GLU GLU A . n A 1 56 LEU 56 352 352 LEU LEU A . n A 1 57 ILE 57 353 353 ILE ILE A . n A 1 58 TYR 58 354 354 TYR TYR A . n A 1 59 GLU 59 355 355 GLU GLU A . n A 1 60 GLY 60 356 356 GLY GLY A . n A 1 61 ARG 61 357 357 ARG ARG A . n A 1 62 ARG 62 358 358 ARG ARG A . n A 1 63 LEU 63 359 359 LEU LEU A . n A 1 64 VAL 64 360 360 VAL VAL A . n A 1 65 LEU 65 361 361 LEU LEU A . n A 1 66 GLU 66 362 362 GLU GLU A . n A 1 67 PRO 67 363 363 PRO PRO A . n A 1 68 GLY 68 364 364 GLY GLY A . n A 1 69 ARG 69 365 365 ARG ARG A . n A 1 70 LEU 70 366 366 LEU LEU A . n A 1 71 ALA 71 367 367 ALA ALA A . n A 1 72 GLN 72 368 368 GLN GLN A . n A 1 73 HIS 73 369 369 HIS HIS A . n A 1 74 PHE 74 370 370 PHE PHE A . n A 1 75 PRO 75 371 371 PRO PRO A . n A 1 76 LYS 76 372 372 LYS LYS A . n A 1 77 THR 77 373 373 THR THR A . n A 1 78 THR 78 374 374 THR THR A . n A 1 79 GLU 79 375 375 GLU GLU A . n A 1 80 GLU 80 376 376 GLU GLU A . n A 1 81 ASN 81 377 377 ASN ASN A . n A 1 82 PRO 82 378 378 PRO PRO A . n A 1 83 ILE 83 379 379 ILE ILE A . n A 1 84 PHE 84 380 380 PHE PHE A . n A 1 85 VAL 85 381 381 VAL VAL A . n A 1 86 VAL 86 382 382 VAL VAL A . n A 1 87 SER 87 383 383 SER SER A . n A 1 88 LEU 88 384 384 LEU LEU A . n A 1 89 GLU 89 385 385 GLU GLU A . n A 1 90 ARG 90 386 386 ARG ARG A . n A 1 91 PRO 91 387 ? ? ? A . n A 1 92 HIS 92 388 ? ? ? A . n A 1 93 ARG 93 389 ? ? ? A . n A 1 94 ASP 94 390 ? ? ? A . n B 1 1 GLY 1 297 ? ? ? B . n B 1 2 PRO 2 298 ? ? ? B . n B 1 3 LEU 3 299 ? ? ? B . n B 1 4 GLY 4 300 ? ? ? B . n B 1 5 SER 5 301 ? ? ? B . n B 1 6 THR 6 302 ? ? ? B . n B 1 7 SER 7 303 ? ? ? B . n B 1 8 ASP 8 304 304 ASP ASP B . n B 1 9 ILE 9 305 305 ILE ILE B . n B 1 10 LEU 10 306 306 LEU LEU B . n B 1 11 HIS 11 307 307 HIS HIS B . n B 1 12 ARG 12 308 308 ARG ARG B . n B 1 13 MET 13 309 309 MET MET B . n B 1 14 VAL 14 310 310 VAL VAL B . n B 1 15 ILE 15 311 311 ILE ILE B . n B 1 16 HIS 16 312 312 HIS HIS B . n B 1 17 VAL 17 313 313 VAL VAL B . n B 1 18 PHE 18 314 314 PHE PHE B . n B 1 19 SER 19 315 315 SER SER B . n B 1 20 LEU 20 316 316 LEU LEU B . n B 1 21 GLN 21 317 317 GLN GLN B . n B 1 22 GLN 22 318 318 GLN GLN B . n B 1 23 MET 23 319 319 MET MET B . n B 1 24 THR 24 320 320 THR THR B . n B 1 25 ALA 25 321 321 ALA ALA B . n B 1 26 HIS 26 322 322 HIS HIS B . n B 1 27 LYS 27 323 323 LYS LYS B . n B 1 28 ILE 28 324 324 ILE ILE B . n B 1 29 TYR 29 325 325 TYR TYR B . n B 1 30 ILE 30 326 326 ILE ILE B . n B 1 31 HIS 31 327 327 HIS HIS B . n B 1 32 SER 32 328 328 SER SER B . n B 1 33 TYR 33 329 329 TYR TYR B . n B 1 34 ASN 34 330 330 ASN ASN B . n B 1 35 THR 35 331 331 THR THR B . n B 1 36 ALA 36 332 332 ALA ALA B . n B 1 37 THR 37 333 333 THR THR B . n B 1 38 ILE 38 334 334 ILE ILE B . n B 1 39 PHE 39 335 335 PHE PHE B . n B 1 40 HIS 40 336 336 HIS HIS B . n B 1 41 GLU 41 337 337 GLU GLU B . n B 1 42 LEU 42 338 338 LEU LEU B . n B 1 43 VAL 43 339 339 VAL VAL B . n B 1 44 TYR 44 340 340 TYR TYR B . n B 1 45 LYS 45 341 341 LYS LYS B . n B 1 46 GLN 46 342 342 GLN GLN B . n B 1 47 THR 47 343 343 THR THR B . n B 1 48 LYS 48 344 344 LYS LYS B . n B 1 49 ILE 49 345 345 ILE ILE B . n B 1 50 ILE 50 346 346 ILE ILE B . n B 1 51 SER 51 347 347 SER SER B . n B 1 52 SER 52 348 348 SER SER B . n B 1 53 ASN 53 349 349 ASN ASN B . n B 1 54 GLN 54 350 350 GLN GLN B . n B 1 55 GLU 55 351 351 GLU GLU B . n B 1 56 LEU 56 352 352 LEU LEU B . n B 1 57 ILE 57 353 353 ILE ILE B . n B 1 58 TYR 58 354 354 TYR TYR B . n B 1 59 GLU 59 355 355 GLU GLU B . n B 1 60 GLY 60 356 356 GLY GLY B . n B 1 61 ARG 61 357 357 ARG ARG B . n B 1 62 ARG 62 358 358 ARG ARG B . n B 1 63 LEU 63 359 359 LEU LEU B . n B 1 64 VAL 64 360 360 VAL VAL B . n B 1 65 LEU 65 361 361 LEU LEU B . n B 1 66 GLU 66 362 362 GLU ALA B . n B 1 67 PRO 67 363 363 PRO PRO B . n B 1 68 GLY 68 364 364 GLY GLY B . n B 1 69 ARG 69 365 365 ARG ARG B . n B 1 70 LEU 70 366 366 LEU LEU B . n B 1 71 ALA 71 367 367 ALA ALA B . n B 1 72 GLN 72 368 368 GLN GLN B . n B 1 73 HIS 73 369 369 HIS HIS B . n B 1 74 PHE 74 370 370 PHE PHE B . n B 1 75 PRO 75 371 371 PRO PRO B . n B 1 76 LYS 76 372 372 LYS LYS B . n B 1 77 THR 77 373 373 THR THR B . n B 1 78 THR 78 374 374 THR THR B . n B 1 79 GLU 79 375 375 GLU ALA B . n B 1 80 GLU 80 376 376 GLU GLU B . n B 1 81 ASN 81 377 377 ASN ASN B . n B 1 82 PRO 82 378 378 PRO PRO B . n B 1 83 ILE 83 379 379 ILE ILE B . n B 1 84 PHE 84 380 380 PHE PHE B . n B 1 85 VAL 85 381 381 VAL VAL B . n B 1 86 VAL 86 382 382 VAL VAL B . n B 1 87 SER 87 383 383 SER SER B . n B 1 88 LEU 88 384 384 LEU LEU B . n B 1 89 GLU 89 385 385 GLU ALA B . n B 1 90 ARG 90 386 ? ? ? B . n B 1 91 PRO 91 387 ? ? ? B . n B 1 92 HIS 92 388 ? ? ? B . n B 1 93 ARG 93 389 ? ? ? B . n B 1 94 ASP 94 390 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 401 1 HOH HOH A . C 2 HOH 2 402 3 HOH HOH A . C 2 HOH 3 403 4 HOH HOH A . C 2 HOH 4 404 5 HOH HOH A . C 2 HOH 5 405 6 HOH HOH A . C 2 HOH 6 406 7 HOH HOH A . C 2 HOH 7 407 8 HOH HOH A . C 2 HOH 8 408 10 HOH HOH A . C 2 HOH 9 409 11 HOH HOH A . C 2 HOH 10 410 12 HOH HOH A . C 2 HOH 11 411 13 HOH HOH A . C 2 HOH 12 412 15 HOH HOH A . C 2 HOH 13 413 16 HOH HOH A . C 2 HOH 14 414 17 HOH HOH A . C 2 HOH 15 415 18 HOH HOH A . C 2 HOH 16 416 19 HOH HOH A . C 2 HOH 17 417 20 HOH HOH A . C 2 HOH 18 418 21 HOH HOH A . C 2 HOH 19 419 23 HOH HOH A . C 2 HOH 20 420 24 HOH HOH A . C 2 HOH 21 421 26 HOH HOH A . C 2 HOH 22 422 27 HOH HOH A . C 2 HOH 23 423 29 HOH HOH A . C 2 HOH 24 424 33 HOH HOH A . C 2 HOH 25 425 34 HOH HOH A . C 2 HOH 26 426 35 HOH HOH A . C 2 HOH 27 427 36 HOH HOH A . C 2 HOH 28 428 37 HOH HOH A . C 2 HOH 29 429 41 HOH HOH A . C 2 HOH 30 430 42 HOH HOH A . C 2 HOH 31 431 44 HOH HOH A . C 2 HOH 32 432 46 HOH HOH A . C 2 HOH 33 433 47 HOH HOH A . C 2 HOH 34 434 49 HOH HOH A . C 2 HOH 35 435 51 HOH HOH A . C 2 HOH 36 436 52 HOH HOH A . C 2 HOH 37 437 53 HOH HOH A . C 2 HOH 38 438 56 HOH HOH A . C 2 HOH 39 439 58 HOH HOH A . C 2 HOH 40 440 61 HOH HOH A . C 2 HOH 41 441 63 HOH HOH A . C 2 HOH 42 442 67 HOH HOH A . C 2 HOH 43 443 70 HOH HOH A . C 2 HOH 44 444 71 HOH HOH A . C 2 HOH 45 445 72 HOH HOH A . C 2 HOH 46 446 73 HOH HOH A . C 2 HOH 47 447 75 HOH HOH A . C 2 HOH 48 448 76 HOH HOH A . C 2 HOH 49 449 77 HOH HOH A . C 2 HOH 50 450 79 HOH HOH A . C 2 HOH 51 451 80 HOH HOH A . C 2 HOH 52 452 81 HOH HOH A . C 2 HOH 53 453 82 HOH HOH A . C 2 HOH 54 454 83 HOH HOH A . C 2 HOH 55 455 85 HOH HOH A . C 2 HOH 56 456 87 HOH HOH A . C 2 HOH 57 457 88 HOH HOH A . C 2 HOH 58 458 89 HOH HOH A . C 2 HOH 59 459 90 HOH HOH A . C 2 HOH 60 460 91 HOH HOH A . C 2 HOH 61 461 92 HOH HOH A . C 2 HOH 62 462 95 HOH HOH A . C 2 HOH 63 463 96 HOH HOH A . C 2 HOH 64 464 97 HOH HOH A . C 2 HOH 65 465 99 HOH HOH A . C 2 HOH 66 466 102 HOH HOH A . C 2 HOH 67 467 103 HOH HOH A . C 2 HOH 68 468 106 HOH HOH A . C 2 HOH 69 469 107 HOH HOH A . C 2 HOH 70 470 109 HOH HOH A . C 2 HOH 71 471 114 HOH HOH A . C 2 HOH 72 472 115 HOH HOH A . C 2 HOH 73 473 116 HOH HOH A . C 2 HOH 74 474 118 HOH HOH A . C 2 HOH 75 475 119 HOH HOH A . C 2 HOH 76 476 121 HOH HOH A . C 2 HOH 77 477 124 HOH HOH A . C 2 HOH 78 478 125 HOH HOH A . C 2 HOH 79 479 126 HOH HOH A . C 2 HOH 80 480 127 HOH HOH A . C 2 HOH 81 481 128 HOH HOH A . C 2 HOH 82 482 130 HOH HOH A . C 2 HOH 83 483 133 HOH HOH A . C 2 HOH 84 484 135 HOH HOH A . C 2 HOH 85 485 136 HOH HOH A . C 2 HOH 86 486 137 HOH HOH A . C 2 HOH 87 487 138 HOH HOH A . C 2 HOH 88 488 139 HOH HOH A . C 2 HOH 89 489 140 HOH HOH A . C 2 HOH 90 490 143 HOH HOH A . C 2 HOH 91 491 144 HOH HOH A . C 2 HOH 92 492 145 HOH HOH A . C 2 HOH 93 493 146 HOH HOH A . C 2 HOH 94 494 147 HOH HOH A . C 2 HOH 95 495 150 HOH HOH A . C 2 HOH 96 496 152 HOH HOH A . C 2 HOH 97 497 153 HOH HOH A . C 2 HOH 98 498 154 HOH HOH A . C 2 HOH 99 499 159 HOH HOH A . C 2 HOH 100 500 161 HOH HOH A . C 2 HOH 101 501 162 HOH HOH A . C 2 HOH 102 502 163 HOH HOH A . C 2 HOH 103 503 166 HOH HOH A . C 2 HOH 104 504 168 HOH HOH A . C 2 HOH 105 505 169 HOH HOH A . C 2 HOH 106 506 170 HOH HOH A . C 2 HOH 107 507 171 HOH HOH A . C 2 HOH 108 508 173 HOH HOH A . C 2 HOH 109 509 176 HOH HOH A . C 2 HOH 110 510 181 HOH HOH A . C 2 HOH 111 511 184 HOH HOH A . C 2 HOH 112 512 188 HOH HOH A . C 2 HOH 113 513 190 HOH HOH A . C 2 HOH 114 514 195 HOH HOH A . C 2 HOH 115 515 196 HOH HOH A . C 2 HOH 116 516 199 HOH HOH A . C 2 HOH 117 517 200 HOH HOH A . C 2 HOH 118 518 202 HOH HOH A . C 2 HOH 119 519 203 HOH HOH A . C 2 HOH 120 520 204 HOH HOH A . C 2 HOH 121 521 206 HOH HOH A . C 2 HOH 122 522 207 HOH HOH A . C 2 HOH 123 523 208 HOH HOH A . C 2 HOH 124 524 209 HOH HOH A . C 2 HOH 125 525 210 HOH HOH A . C 2 HOH 126 526 211 HOH HOH A . C 2 HOH 127 527 212 HOH HOH A . C 2 HOH 128 528 213 HOH HOH A . C 2 HOH 129 529 216 HOH HOH A . C 2 HOH 130 530 218 HOH HOH A . D 2 HOH 1 401 2 HOH HOH B . D 2 HOH 2 402 9 HOH HOH B . D 2 HOH 3 403 14 HOH HOH B . D 2 HOH 4 404 22 HOH HOH B . D 2 HOH 5 405 25 HOH HOH B . D 2 HOH 6 406 28 HOH HOH B . D 2 HOH 7 407 30 HOH HOH B . D 2 HOH 8 408 31 HOH HOH B . D 2 HOH 9 409 32 HOH HOH B . D 2 HOH 10 410 38 HOH HOH B . D 2 HOH 11 411 39 HOH HOH B . D 2 HOH 12 412 40 HOH HOH B . D 2 HOH 13 413 43 HOH HOH B . D 2 HOH 14 414 45 HOH HOH B . D 2 HOH 15 415 48 HOH HOH B . D 2 HOH 16 416 50 HOH HOH B . D 2 HOH 17 417 54 HOH HOH B . D 2 HOH 18 418 55 HOH HOH B . D 2 HOH 19 419 57 HOH HOH B . D 2 HOH 20 420 59 HOH HOH B . D 2 HOH 21 421 60 HOH HOH B . D 2 HOH 22 422 62 HOH HOH B . D 2 HOH 23 423 64 HOH HOH B . D 2 HOH 24 424 65 HOH HOH B . D 2 HOH 25 425 66 HOH HOH B . D 2 HOH 26 426 68 HOH HOH B . D 2 HOH 27 427 69 HOH HOH B . D 2 HOH 28 428 74 HOH HOH B . D 2 HOH 29 429 78 HOH HOH B . D 2 HOH 30 430 84 HOH HOH B . D 2 HOH 31 431 86 HOH HOH B . D 2 HOH 32 432 93 HOH HOH B . D 2 HOH 33 433 94 HOH HOH B . D 2 HOH 34 434 98 HOH HOH B . D 2 HOH 35 435 100 HOH HOH B . D 2 HOH 36 436 101 HOH HOH B . D 2 HOH 37 437 104 HOH HOH B . D 2 HOH 38 438 108 HOH HOH B . D 2 HOH 39 439 110 HOH HOH B . D 2 HOH 40 440 111 HOH HOH B . D 2 HOH 41 441 112 HOH HOH B . D 2 HOH 42 442 113 HOH HOH B . D 2 HOH 43 443 117 HOH HOH B . D 2 HOH 44 444 120 HOH HOH B . D 2 HOH 45 445 122 HOH HOH B . D 2 HOH 46 446 123 HOH HOH B . D 2 HOH 47 447 129 HOH HOH B . D 2 HOH 48 448 131 HOH HOH B . D 2 HOH 49 449 132 HOH HOH B . D 2 HOH 50 450 134 HOH HOH B . D 2 HOH 51 451 141 HOH HOH B . D 2 HOH 52 452 142 HOH HOH B . D 2 HOH 53 453 148 HOH HOH B . D 2 HOH 54 454 149 HOH HOH B . D 2 HOH 55 455 151 HOH HOH B . D 2 HOH 56 456 155 HOH HOH B . D 2 HOH 57 457 156 HOH HOH B . D 2 HOH 58 458 157 HOH HOH B . D 2 HOH 59 459 158 HOH HOH B . D 2 HOH 60 460 160 HOH HOH B . D 2 HOH 61 461 164 HOH HOH B . D 2 HOH 62 462 165 HOH HOH B . D 2 HOH 63 463 172 HOH HOH B . D 2 HOH 64 464 174 HOH HOH B . D 2 HOH 65 465 175 HOH HOH B . D 2 HOH 66 466 177 HOH HOH B . D 2 HOH 67 467 178 HOH HOH B . D 2 HOH 68 468 179 HOH HOH B . D 2 HOH 69 469 180 HOH HOH B . D 2 HOH 70 470 183 HOH HOH B . D 2 HOH 71 471 185 HOH HOH B . D 2 HOH 72 472 186 HOH HOH B . D 2 HOH 73 473 187 HOH HOH B . D 2 HOH 74 474 189 HOH HOH B . D 2 HOH 75 475 191 HOH HOH B . D 2 HOH 76 476 192 HOH HOH B . D 2 HOH 77 477 193 HOH HOH B . D 2 HOH 78 478 194 HOH HOH B . D 2 HOH 79 479 197 HOH HOH B . D 2 HOH 80 480 198 HOH HOH B . D 2 HOH 81 481 201 HOH HOH B . D 2 HOH 82 482 205 HOH HOH B . D 2 HOH 83 483 215 HOH HOH B . D 2 HOH 84 484 217 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 362 ? CG ? B GLU 66 CG 2 1 Y 1 B GLU 362 ? CD ? B GLU 66 CD 3 1 Y 1 B GLU 362 ? OE1 ? B GLU 66 OE1 4 1 Y 1 B GLU 362 ? OE2 ? B GLU 66 OE2 5 1 Y 1 B GLU 375 ? CG ? B GLU 79 CG 6 1 Y 1 B GLU 375 ? CD ? B GLU 79 CD 7 1 Y 1 B GLU 375 ? OE1 ? B GLU 79 OE1 8 1 Y 1 B GLU 375 ? OE2 ? B GLU 79 OE2 9 1 Y 1 B GLU 385 ? CG ? B GLU 89 CG 10 1 Y 1 B GLU 385 ? CD ? B GLU 89 CD 11 1 Y 1 B GLU 385 ? OE1 ? B GLU 89 OE1 12 1 Y 1 B GLU 385 ? OE2 ? B GLU 89 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.5_2)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # _cell.entry_id 4EFO _cell.length_a 34.353 _cell.length_b 47.785 _cell.length_c 61.832 _cell.angle_alpha 90.00 _cell.angle_beta 93.54 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4EFO _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4EFO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 46.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.3 _exptl_crystal_grow.pdbx_details '0.1M BIS-TRIS,0.2M NaCl,21% PEG 3350, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.pdbx_collection_date 2010-05-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Numerical link type Si(111) double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.978 # _reflns.entry_id 4EFO _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.769 _reflns.number_obs 19650 _reflns.number_all 19689 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.77 _reflns_shell.d_res_low 1.8 _reflns_shell.percent_possible_all 97 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4EFO _refine.ls_number_reflns_obs 19627 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.857 _refine.ls_d_res_high 1.769 _refine.ls_percent_reflns_obs 99.71 _refine.ls_R_factor_obs 0.1713 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1695 _refine.ls_R_factor_R_free 0.2039 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.12 _refine.ls_number_reflns_R_free 1004 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -4.0962 _refine.aniso_B[2][2] 0.9450 _refine.aniso_B[3][3] 3.1512 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 2.0024 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.364 _refine.solvent_model_param_bsol 43.159 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.14 _refine.pdbx_overall_phase_error 19.31 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1401 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 214 _refine_hist.number_atoms_total 1615 _refine_hist.d_res_high 1.769 _refine_hist.d_res_low 30.857 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 1434 ? 'X-RAY DIFFRACTION' f_angle_d 1.015 ? ? 1942 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.744 ? ? 521 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.069 ? ? 226 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 241 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 7 1.7695 1.8627 2606 0.1859 98.00 0.2556 . . 134 . . . . 'X-RAY DIFFRACTION' 7 1.8627 1.9794 2627 0.1681 100.00 0.2118 . . 150 . . . . 'X-RAY DIFFRACTION' 7 1.9794 2.1322 2656 0.1587 100.00 0.2120 . . 151 . . . . 'X-RAY DIFFRACTION' 7 2.1322 2.3467 2660 0.1666 100.00 0.2157 . . 134 . . . . 'X-RAY DIFFRACTION' 7 2.3467 2.6861 2690 0.1803 100.00 0.2229 . . 131 . . . . 'X-RAY DIFFRACTION' 7 2.6861 3.3836 2662 0.1755 100.00 0.2205 . . 148 . . . . 'X-RAY DIFFRACTION' 7 3.3836 30.8619 2722 0.1589 100.00 0.1717 . . 156 . . . . # _database_PDB_matrix.entry_id 4EFO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4EFO _struct.title 'Crystal structure of the ubiquitin-like domain of human TBK1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4EFO _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'ubiquitin like domain, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TBK1_HUMAN _struct_ref.pdbx_db_accession Q9UHD2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TSDILHRMVIHVFSLQQMTAHKIYIHSYNTATIFHELVYKQTKIISSNQELIYEGRRLVLEPGRLAQHFPKTTEENPIFV VS ; _struct_ref.pdbx_align_begin 302 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4EFO A 6 ? 87 ? Q9UHD2 302 ? 383 ? 302 383 2 1 4EFO B 6 ? 87 ? Q9UHD2 302 ? 383 ? 302 383 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4EFO GLY A 1 ? UNP Q9UHD2 ? ? 'expression tag' 297 1 1 4EFO PRO A 2 ? UNP Q9UHD2 ? ? 'expression tag' 298 2 1 4EFO LEU A 3 ? UNP Q9UHD2 ? ? 'expression tag' 299 3 1 4EFO GLY A 4 ? UNP Q9UHD2 ? ? 'expression tag' 300 4 1 4EFO SER A 5 ? UNP Q9UHD2 ? ? 'expression tag' 301 5 1 4EFO LEU A 88 ? UNP Q9UHD2 ? ? 'expression tag' 384 6 1 4EFO GLU A 89 ? UNP Q9UHD2 ? ? 'expression tag' 385 7 1 4EFO ARG A 90 ? UNP Q9UHD2 ? ? 'expression tag' 386 8 1 4EFO PRO A 91 ? UNP Q9UHD2 ? ? 'expression tag' 387 9 1 4EFO HIS A 92 ? UNP Q9UHD2 ? ? 'expression tag' 388 10 1 4EFO ARG A 93 ? UNP Q9UHD2 ? ? 'expression tag' 389 11 1 4EFO ASP A 94 ? UNP Q9UHD2 ? ? 'expression tag' 390 12 2 4EFO GLY B 1 ? UNP Q9UHD2 ? ? 'expression tag' 297 13 2 4EFO PRO B 2 ? UNP Q9UHD2 ? ? 'expression tag' 298 14 2 4EFO LEU B 3 ? UNP Q9UHD2 ? ? 'expression tag' 299 15 2 4EFO GLY B 4 ? UNP Q9UHD2 ? ? 'expression tag' 300 16 2 4EFO SER B 5 ? UNP Q9UHD2 ? ? 'expression tag' 301 17 2 4EFO LEU B 88 ? UNP Q9UHD2 ? ? 'expression tag' 384 18 2 4EFO GLU B 89 ? UNP Q9UHD2 ? ? 'expression tag' 385 19 2 4EFO ARG B 90 ? UNP Q9UHD2 ? ? 'expression tag' 386 20 2 4EFO PRO B 91 ? UNP Q9UHD2 ? ? 'expression tag' 387 21 2 4EFO HIS B 92 ? UNP Q9UHD2 ? ? 'expression tag' 388 22 2 4EFO ARG B 93 ? UNP Q9UHD2 ? ? 'expression tag' 389 23 2 4EFO ASP B 94 ? UNP Q9UHD2 ? ? 'expression tag' 390 24 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 4 ? LEU A 10 ? GLY A 300 LEU A 306 5 ? 7 HELX_P HELX_P2 2 THR A 35 ? LYS A 48 ? THR A 331 LYS A 344 1 ? 14 HELX_P HELX_P3 3 ILE A 50 ? SER A 52 ? ILE A 346 SER A 348 5 ? 3 HELX_P HELX_P4 4 LEU A 70 ? PHE A 74 ? LEU A 366 PHE A 370 5 ? 5 HELX_P HELX_P5 5 ASP B 8 ? LEU B 10 ? ASP B 304 LEU B 306 5 ? 3 HELX_P HELX_P6 6 THR B 35 ? LYS B 48 ? THR B 331 LYS B 344 1 ? 14 HELX_P HELX_P7 7 ILE B 50 ? SER B 52 ? ILE B 346 SER B 348 5 ? 3 HELX_P HELX_P8 8 LEU B 70 ? PHE B 74 ? LEU B 366 PHE B 370 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 2 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 298 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 LEU _struct_mon_prot_cis.pdbx_label_seq_id_2 3 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 LEU _struct_mon_prot_cis.pdbx_auth_seq_id_2 299 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.32 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 24 ? HIS A 31 ? THR A 320 HIS A 327 A 2 ARG A 12 ? SER A 19 ? ARG A 308 SER A 315 A 3 ILE A 83 ? SER A 87 ? ILE A 379 SER A 383 A 4 GLN A 54 ? TYR A 58 ? GLN A 350 TYR A 354 A 5 ARG A 61 ? LEU A 63 ? ARG A 357 LEU A 359 B 1 THR B 24 ? HIS B 31 ? THR B 320 HIS B 327 B 2 ARG B 12 ? SER B 19 ? ARG B 308 SER B 315 B 3 ILE B 83 ? SER B 87 ? ILE B 379 SER B 383 B 4 GLN B 54 ? TYR B 58 ? GLN B 350 TYR B 354 B 5 ARG B 61 ? LEU B 63 ? ARG B 357 LEU B 359 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 28 ? O ILE A 324 N ILE A 15 ? N ILE A 311 A 2 3 N HIS A 16 ? N HIS A 312 O ILE A 83 ? O ILE A 379 A 3 4 O VAL A 86 ? O VAL A 382 N GLU A 55 ? N GLU A 351 A 4 5 N LEU A 56 ? N LEU A 352 O LEU A 63 ? O LEU A 359 B 1 2 O THR B 24 ? O THR B 320 N SER B 19 ? N SER B 315 B 2 3 N PHE B 18 ? N PHE B 314 O VAL B 85 ? O VAL B 381 B 3 4 O PHE B 84 ? O PHE B 380 N ILE B 57 ? N ILE B 353 B 4 5 N TYR B 58 ? N TYR B 354 O ARG B 61 ? O ARG B 357 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 330 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 421 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 297 ? A GLY 1 2 1 Y 1 A PRO 387 ? A PRO 91 3 1 Y 1 A HIS 388 ? A HIS 92 4 1 Y 1 A ARG 389 ? A ARG 93 5 1 Y 1 A ASP 390 ? A ASP 94 6 1 Y 1 B GLY 297 ? B GLY 1 7 1 Y 1 B PRO 298 ? B PRO 2 8 1 Y 1 B LEU 299 ? B LEU 3 9 1 Y 1 B GLY 300 ? B GLY 4 10 1 Y 1 B SER 301 ? B SER 5 11 1 Y 1 B THR 302 ? B THR 6 12 1 Y 1 B SER 303 ? B SER 7 13 1 Y 1 B ARG 386 ? B ARG 90 14 1 Y 1 B PRO 387 ? B PRO 91 15 1 Y 1 B HIS 388 ? B HIS 92 16 1 Y 1 B ARG 389 ? B ARG 93 17 1 Y 1 B ASP 390 ? B ASP 94 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _atom_sites.entry_id 4EFO _atom_sites.fract_transf_matrix[1][1] 0.029110 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001798 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020927 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016204 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_