HEADER PROTEIN TRANSPORT 06-APR-12 4EJE TITLE STRUCTURE OF THE TSG101 UEV DOMAIN IN COMPLEX WITH AN EBOLA PTAP LATE TITLE 2 DOMAIN PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR SUSCEPTIBILITY GENE 101 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UEV DOMAIN (UNP RESIDUES 1-145); COMPND 5 SYNONYM: ESCRT-I COMPLEX SUBUNIT TSG101; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MATRIX PROTEIN VP40; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: EBOLA VIRUS PTAP LATE DOMAIN (UNP RESIDUES 5-13); COMPND 11 SYNONYM: MEMBRANE-ASSOCIATED PROTEIN VP40; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TSG101; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBAT4; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: EBOLA VIRUS; SOURCE 14 ORGANISM_COMMON: ZEBOV; SOURCE 15 ORGANISM_TAXID: 128952; SOURCE 16 OTHER_DETAILS: 9 RESIDUES PEPTIDE OF THE PTAP LATE DOMAIN OF THE SOURCE 17 EBOLA VIRUS KEYWDS ALPHA AND BETA PROTEIN, UEV DOMAIN, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.CAMARA-ARTIGAS REVDAT 3 13-SEP-23 4EJE 1 REMARK SEQADV REVDAT 2 24-JAN-18 4EJE 1 JRNL REVDAT 1 10-APR-13 4EJE 0 JRNL AUTH A.CAMARA-ARTIGAS,A.PALENCIA,M.ANDUJAR-SANCHEZ, JRNL AUTH 2 M.IGLESIAS-BEXIGA,I.LUQUE,J.C.MARTINEZ JRNL TITL TO BE PUBLISHED JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 18878 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2142 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1313 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 156 REMARK 3 BIN FREE R VALUE : 0.4090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2445 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 79 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.18000 REMARK 3 B22 (A**2) : -3.18000 REMARK 3 B33 (A**2) : 6.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.259 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.229 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.193 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.816 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2520 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3442 ; 2.086 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 299 ; 7.277 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;36.410 ;23.878 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;19.364 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;29.315 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 392 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1870 ; 0.012 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1528 ; 1.275 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2529 ; 2.154 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 992 ; 3.418 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 913 ; 5.141 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 5 A 40 2 REMARK 3 1 B 5 B 40 2 REMARK 3 2 A 55 A 140 4 REMARK 3 2 B 55 B 140 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 144 ; 0.200 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 845 ; 0.380 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 144 ; 1.180 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 845 ; 1.520 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4EJE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM16 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21003 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.199 REMARK 200 RESOLUTION RANGE LOW (A) : 74.631 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : 0.05900 REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.40400 REMARK 200 R SYM FOR SHELL (I) : 0.40400 REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2F0R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M OF AMMONIUM SULPHATE, 25% PEG REMARK 280 4K, 25% 0.1 M HEPES, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.77200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.77200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.65200 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.77200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.77200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.65200 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 52.77200 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 52.77200 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 37.65200 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 52.77200 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 52.77200 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 37.65200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 MET B -13 REMARK 465 ARG B -12 REMARK 465 GLY B -11 REMARK 465 SER B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 GLY B -3 REMARK 465 MET B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 PRO B 145 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 17 62.67 -101.49 REMARK 500 LYS A 118 109.16 -162.02 REMARK 500 LYS B 10 -70.80 -38.04 REMARK 500 VAL B 43 -64.63 -107.79 REMARK 500 PHE B 44 -151.40 100.52 REMARK 500 ARG B 50 94.86 -67.42 REMARK 500 PRO B 84 165.93 -35.71 REMARK 500 LYS B 90 76.46 -115.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F0R RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC STRUCTURE OF HUMAN TSG101 UEV DOMAIN DBREF 4EJE A 1 145 UNP Q99816 TS101_HUMAN 1 145 DBREF 4EJE B 1 145 UNP Q99816 TS101_HUMAN 1 145 DBREF 4EJE C 1 9 UNP Q05128 VP40_EBOZM 5 13 DBREF 4EJE D 1 9 UNP Q05128 VP40_EBOZM 5 13 SEQADV 4EJE MET A -13 UNP Q99816 EXPRESSION TAG SEQADV 4EJE ARG A -12 UNP Q99816 EXPRESSION TAG SEQADV 4EJE GLY A -11 UNP Q99816 EXPRESSION TAG SEQADV 4EJE SER A -10 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS A -9 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS A -8 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS A -7 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS A -6 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS A -5 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS A -4 UNP Q99816 EXPRESSION TAG SEQADV 4EJE GLY A -3 UNP Q99816 EXPRESSION TAG SEQADV 4EJE MET A -2 UNP Q99816 EXPRESSION TAG SEQADV 4EJE ALA A -1 UNP Q99816 EXPRESSION TAG SEQADV 4EJE SER A 0 UNP Q99816 EXPRESSION TAG SEQADV 4EJE MET B -13 UNP Q99816 EXPRESSION TAG SEQADV 4EJE ARG B -12 UNP Q99816 EXPRESSION TAG SEQADV 4EJE GLY B -11 UNP Q99816 EXPRESSION TAG SEQADV 4EJE SER B -10 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS B -9 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS B -8 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS B -7 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS B -6 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS B -5 UNP Q99816 EXPRESSION TAG SEQADV 4EJE HIS B -4 UNP Q99816 EXPRESSION TAG SEQADV 4EJE GLY B -3 UNP Q99816 EXPRESSION TAG SEQADV 4EJE MET B -2 UNP Q99816 EXPRESSION TAG SEQADV 4EJE ALA B -1 UNP Q99816 EXPRESSION TAG SEQADV 4EJE SER B 0 UNP Q99816 EXPRESSION TAG SEQRES 1 A 159 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 159 SER MET ALA VAL SER GLU SER GLN LEU LYS LYS MET VAL SEQRES 3 A 159 SER LYS TYR LYS TYR ARG ASP LEU THR VAL ARG GLU THR SEQRES 4 A 159 VAL ASN VAL ILE THR LEU TYR LYS ASP LEU LYS PRO VAL SEQRES 5 A 159 LEU ASP SER TYR VAL PHE ASN ASP GLY SER SER ARG GLU SEQRES 6 A 159 LEU MET ASN LEU THR GLY THR ILE PRO VAL PRO TYR ARG SEQRES 7 A 159 GLY ASN THR TYR ASN ILE PRO ILE CYS LEU TRP LEU LEU SEQRES 8 A 159 ASP THR TYR PRO TYR ASN PRO PRO ILE CYS PHE VAL LYS SEQRES 9 A 159 PRO THR SER SER MET THR ILE LYS THR GLY LYS HIS VAL SEQRES 10 A 159 ASP ALA ASN GLY LYS ILE TYR LEU PRO TYR LEU HIS GLU SEQRES 11 A 159 TRP LYS HIS PRO GLN SER ASP LEU LEU GLY LEU ILE GLN SEQRES 12 A 159 VAL MET ILE VAL VAL PHE GLY ASP GLU PRO PRO VAL PHE SEQRES 13 A 159 SER ARG PRO SEQRES 1 B 159 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 159 SER MET ALA VAL SER GLU SER GLN LEU LYS LYS MET VAL SEQRES 3 B 159 SER LYS TYR LYS TYR ARG ASP LEU THR VAL ARG GLU THR SEQRES 4 B 159 VAL ASN VAL ILE THR LEU TYR LYS ASP LEU LYS PRO VAL SEQRES 5 B 159 LEU ASP SER TYR VAL PHE ASN ASP GLY SER SER ARG GLU SEQRES 6 B 159 LEU MET ASN LEU THR GLY THR ILE PRO VAL PRO TYR ARG SEQRES 7 B 159 GLY ASN THR TYR ASN ILE PRO ILE CYS LEU TRP LEU LEU SEQRES 8 B 159 ASP THR TYR PRO TYR ASN PRO PRO ILE CYS PHE VAL LYS SEQRES 9 B 159 PRO THR SER SER MET THR ILE LYS THR GLY LYS HIS VAL SEQRES 10 B 159 ASP ALA ASN GLY LYS ILE TYR LEU PRO TYR LEU HIS GLU SEQRES 11 B 159 TRP LYS HIS PRO GLN SER ASP LEU LEU GLY LEU ILE GLN SEQRES 12 B 159 VAL MET ILE VAL VAL PHE GLY ASP GLU PRO PRO VAL PHE SEQRES 13 B 159 SER ARG PRO SEQRES 1 C 9 ILE LEU PRO THR ALA PRO PRO GLU TYR SEQRES 1 D 9 ILE LEU PRO THR ALA PRO PRO GLU TYR HET SO4 A 201 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *79(H2 O) HELIX 1 1 SER A 4 VAL A 12 1 9 HELIX 2 2 TYR A 17 TYR A 32 1 16 HELIX 3 3 LEU A 111 GLU A 116 1 6 HELIX 4 4 ASP A 123 GLU A 138 1 16 HELIX 5 5 SER B 4 SER B 13 1 10 HELIX 6 6 TYR B 17 TYR B 32 1 16 HELIX 7 7 LEU B 111 GLU B 116 1 6 HELIX 8 8 ASP B 123 GLU B 138 1 16 SHEET 1 A 4 LYS A 36 VAL A 43 0 SHEET 2 A 4 SER A 49 TYR A 63 -1 O LEU A 52 N ASP A 40 SHEET 3 A 4 ASN A 66 TRP A 75 -1 O ASN A 66 N TYR A 63 SHEET 4 A 4 ILE A 86 VAL A 89 -1 O ILE A 86 N TRP A 75 SHEET 1 B 2 MET A 95 ILE A 97 0 SHEET 2 B 2 VAL A 141 SER A 143 -1 O PHE A 142 N THR A 96 SHEET 1 C 4 LEU B 35 ASP B 40 0 SHEET 2 C 4 LEU B 52 TYR B 63 -1 O THR B 56 N LYS B 36 SHEET 3 C 4 ASN B 66 LEU B 76 -1 O LEU B 76 N MET B 53 SHEET 4 C 4 PRO B 85 VAL B 89 -1 O ILE B 86 N TRP B 75 SHEET 1 D 2 MET B 95 ILE B 97 0 SHEET 2 D 2 VAL B 141 SER B 143 -1 O PHE B 142 N THR B 96 CISPEP 1 TYR A 80 PRO A 81 0 16.10 CISPEP 2 HIS A 119 PRO A 120 0 -6.26 CISPEP 3 ASP B 46 GLY B 47 0 -18.33 CISPEP 4 TYR B 80 PRO B 81 0 25.73 CISPEP 5 HIS B 119 PRO B 120 0 3.31 SITE 1 AC1 4 ASP A 104 ALA A 105 TYR B 17 ARG B 64 CRYST1 105.544 105.544 75.304 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009475 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009475 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013280 0.00000