HEADER HYDROLASE 09-APR-12 4EKS TITLE T4 LYSOZYME L99A/M102H WITH ISOXAZOLE BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENDOLYSIN, LYSIS PROTEIN, MURAMIDASE; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_TAXID: 10665; SOURCE 4 GENE: E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS HYDROLASE, ALKYLATION OF CYS97 EXPDTA X-RAY DIFFRACTION AUTHOR M.MERSKI,B.K.SHOICHET REVDAT 4 13-SEP-23 4EKS 1 REMARK SEQADV LINK REVDAT 3 17-OCT-12 4EKS 1 JRNL REVDAT 2 03-OCT-12 4EKS 1 JRNL REVDAT 1 05-SEP-12 4EKS 0 JRNL AUTH M.MERSKI,B.K.SHOICHET JRNL TITL ENGINEERING A MODEL PROTEIN CAVITY TO CATALYZE THE KEMP JRNL TITL 2 ELIMINATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 16179 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22988064 JRNL DOI 10.1073/PNAS.1208076109 REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 43969 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2480 - 3.8556 0.89 3099 130 0.1649 0.1623 REMARK 3 2 3.8556 - 3.0605 0.91 3109 133 0.1582 0.1745 REMARK 3 3 3.0605 - 2.6736 0.93 3188 131 0.1751 0.1905 REMARK 3 4 2.6736 - 2.4292 0.95 3235 130 0.1689 0.2009 REMARK 3 5 2.4292 - 2.2551 0.95 3258 143 0.1603 0.2067 REMARK 3 6 2.2551 - 2.1221 0.96 3241 135 0.1582 0.1978 REMARK 3 7 2.1221 - 2.0158 0.96 3265 137 0.1603 0.1996 REMARK 3 8 2.0158 - 1.9281 0.97 3273 135 0.1650 0.2156 REMARK 3 9 1.9281 - 1.8539 0.97 3312 139 0.1719 0.1985 REMARK 3 10 1.8539 - 1.7899 0.97 3282 140 0.1859 0.2263 REMARK 3 11 1.7899 - 1.7339 0.97 3307 138 0.2035 0.2279 REMARK 3 12 1.7339 - 1.6844 0.98 3328 138 0.2137 0.2548 REMARK 3 13 1.6844 - 1.6400 0.98 3301 142 0.2430 0.3044 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 49.80 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.46790 REMARK 3 B22 (A**2) : 1.23150 REMARK 3 B33 (A**2) : -0.76360 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.25600 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2997 REMARK 3 ANGLE : 1.205 4050 REMARK 3 CHIRALITY : 0.078 439 REMARK 3 PLANARITY : 0.005 523 REMARK 3 DIHEDRAL : 13.126 1134 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID -10:164 OR RESID 201:208) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4791 13.6915 10.2451 REMARK 3 T TENSOR REMARK 3 T11: -0.2336 T22: -0.1906 REMARK 3 T33: -0.2784 T12: 0.0996 REMARK 3 T13: 0.1322 T23: -0.1152 REMARK 3 L TENSOR REMARK 3 L11: 0.7713 L22: 0.4636 REMARK 3 L33: 0.6199 L12: 0.1890 REMARK 3 L13: 0.2622 L23: -0.4023 REMARK 3 S TENSOR REMARK 3 S11: 0.1322 S12: -0.3638 S13: 0.3771 REMARK 3 S21: 0.2831 S22: 0.0554 S23: 0.2053 REMARK 3 S31: -0.2806 S32: -0.1502 S33: 0.4011 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND (RESID -9:164 OR RESID 201:207) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5492 20.3242 -9.0777 REMARK 3 T TENSOR REMARK 3 T11: 0.0401 T22: 0.0383 REMARK 3 T33: 0.0448 T12: -0.0068 REMARK 3 T13: -0.0109 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.4817 L22: 0.5682 REMARK 3 L33: 0.5252 L12: 0.2383 REMARK 3 L13: 0.0572 L23: 0.2773 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: 0.0307 S13: -0.0430 REMARK 3 S21: -0.0089 S22: 0.0420 S23: -0.0227 REMARK 3 S31: 0.0714 S32: 0.0032 S33: -0.0095 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EKS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071742. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.116 REMARK 200 MONOCHROMATOR : TWO FLAT SI(111) CRYSTALS, REMARK 200 MOUNTED IN A MODEL DCM FROM KHOZU REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43970 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.31300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.7.1_743 REMARK 200 STARTING MODEL: PDB ENTRY 4E97 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% (W/V) PEG-6000, 0.3 M LISO4, 3% REMARK 280 (W/V) TMAO, 50 MM 2-MERCAPTOETHANOL, 50 MM 2-HYDROXYETHYL REMARK 280 DISULFIDE, PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.68500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 48.30000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -37.68500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 GLY A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 ASP A -14 REMARK 465 TYR A -13 REMARK 465 ASP A -12 REMARK 465 ILE A -11 REMARK 465 MET B -22 REMARK 465 GLY B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 ASP B -14 REMARK 465 TYR B -13 REMARK 465 ASP B -12 REMARK 465 ILE B -11 REMARK 465 PRO B -10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A -7 CG CD OE1 OE2 REMARK 470 LYS A 16 CD CE NZ REMARK 470 LYS A 19 NZ REMARK 470 LYS A 35 NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 THR B -9 OG1 CG2 REMARK 470 GLU B -7 CG CD OE1 OE2 REMARK 470 LYS B 35 NZ REMARK 470 ARG B 137 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 142 67.52 -151.09 REMARK 500 CYS A 142 66.71 -150.57 REMARK 500 CYS B 142 67.95 -151.42 REMARK 500 CYS B 142 67.52 -151.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0R1 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0R1 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HED B 207 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4E97 RELATED DB: PDB REMARK 900 RELATED ID: 4EKP RELATED DB: PDB REMARK 900 RELATED ID: 4EKQ RELATED DB: PDB REMARK 900 RELATED ID: 4EKR RELATED DB: PDB DBREF 4EKS A 1 164 UNP P00720 LYS_BPT4 1 164 DBREF 4EKS B 1 164 UNP P00720 LYS_BPT4 1 164 SEQADV 4EKS MET A -22 UNP P00720 EXPRESSION TAG SEQADV 4EKS GLY A -21 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS A -20 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS A -19 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS A -18 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS A -17 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS A -16 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS A -15 UNP P00720 EXPRESSION TAG SEQADV 4EKS ASP A -14 UNP P00720 EXPRESSION TAG SEQADV 4EKS TYR A -13 UNP P00720 EXPRESSION TAG SEQADV 4EKS ASP A -12 UNP P00720 EXPRESSION TAG SEQADV 4EKS ILE A -11 UNP P00720 EXPRESSION TAG SEQADV 4EKS PRO A -10 UNP P00720 EXPRESSION TAG SEQADV 4EKS THR A -9 UNP P00720 EXPRESSION TAG SEQADV 4EKS THR A -8 UNP P00720 EXPRESSION TAG SEQADV 4EKS GLU A -7 UNP P00720 EXPRESSION TAG SEQADV 4EKS ASN A -6 UNP P00720 EXPRESSION TAG SEQADV 4EKS LEU A -5 UNP P00720 EXPRESSION TAG SEQADV 4EKS TYR A -4 UNP P00720 EXPRESSION TAG SEQADV 4EKS PHE A -3 UNP P00720 EXPRESSION TAG SEQADV 4EKS GLN A -2 UNP P00720 EXPRESSION TAG SEQADV 4EKS GLY A -1 UNP P00720 EXPRESSION TAG SEQADV 4EKS SER A 0 UNP P00720 EXPRESSION TAG SEQADV 4EKS CYS A 21 UNP P00720 THR 21 ENGINEERED MUTATION SEQADV 4EKS ASP A 38 UNP P00720 SER 38 ENGINEERED MUTATION SEQADV 4EKS ALA A 99 UNP P00720 LEU 99 ENGINEERED MUTATION SEQADV 4EKS HIS A 102 UNP P00720 MET 102 ENGINEERED MUTATION SEQADV 4EKS VAL A 108 UNP P00720 GLU 108 ENGINEERED MUTATION SEQADV 4EKS VAL A 117 UNP P00720 SER 117 ENGINEERED MUTATION SEQADV 4EKS CYS A 142 UNP P00720 THR 142 ENGINEERED MUTATION SEQADV 4EKS ASP A 144 UNP P00720 ASN 144 ENGINEERED MUTATION SEQADV 4EKS MET B -22 UNP P00720 EXPRESSION TAG SEQADV 4EKS GLY B -21 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS B -20 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS B -19 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS B -18 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS B -17 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS B -16 UNP P00720 EXPRESSION TAG SEQADV 4EKS HIS B -15 UNP P00720 EXPRESSION TAG SEQADV 4EKS ASP B -14 UNP P00720 EXPRESSION TAG SEQADV 4EKS TYR B -13 UNP P00720 EXPRESSION TAG SEQADV 4EKS ASP B -12 UNP P00720 EXPRESSION TAG SEQADV 4EKS ILE B -11 UNP P00720 EXPRESSION TAG SEQADV 4EKS PRO B -10 UNP P00720 EXPRESSION TAG SEQADV 4EKS THR B -9 UNP P00720 EXPRESSION TAG SEQADV 4EKS THR B -8 UNP P00720 EXPRESSION TAG SEQADV 4EKS GLU B -7 UNP P00720 EXPRESSION TAG SEQADV 4EKS ASN B -6 UNP P00720 EXPRESSION TAG SEQADV 4EKS LEU B -5 UNP P00720 EXPRESSION TAG SEQADV 4EKS TYR B -4 UNP P00720 EXPRESSION TAG SEQADV 4EKS PHE B -3 UNP P00720 EXPRESSION TAG SEQADV 4EKS GLN B -2 UNP P00720 EXPRESSION TAG SEQADV 4EKS GLY B -1 UNP P00720 EXPRESSION TAG SEQADV 4EKS SER B 0 UNP P00720 EXPRESSION TAG SEQADV 4EKS CYS B 21 UNP P00720 THR 21 ENGINEERED MUTATION SEQADV 4EKS ASP B 38 UNP P00720 SER 38 ENGINEERED MUTATION SEQADV 4EKS ALA B 99 UNP P00720 LEU 99 ENGINEERED MUTATION SEQADV 4EKS HIS B 102 UNP P00720 MET 102 ENGINEERED MUTATION SEQADV 4EKS VAL B 108 UNP P00720 GLU 108 ENGINEERED MUTATION SEQADV 4EKS VAL B 117 UNP P00720 SER 117 ENGINEERED MUTATION SEQADV 4EKS CYS B 142 UNP P00720 THR 142 ENGINEERED MUTATION SEQADV 4EKS ASP B 144 UNP P00720 ASN 144 ENGINEERED MUTATION SEQRES 1 A 187 MET GLY HIS HIS HIS HIS HIS HIS ASP TYR ASP ILE PRO SEQRES 2 A 187 THR THR GLU ASN LEU TYR PHE GLN GLY SER MET ASN ILE SEQRES 3 A 187 PHE GLU MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS SEQRES 4 A 187 ILE TYR LYS ASP CYS GLU GLY TYR TYR THR ILE GLY ILE SEQRES 5 A 187 GLY HIS LEU LEU THR LYS SER PRO ASP LEU ASN ALA ALA SEQRES 6 A 187 LYS SER GLU LEU ASP LYS ALA ILE GLY ARG ASN CYS ASN SEQRES 7 A 187 GLY VAL ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN SEQRES 8 A 187 GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN SEQRES 9 A 187 ALA LYS LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL SEQRES 10 A 187 ARG ARG CYS ALA ALA ILE ASN HIS VAL PHE GLN MET GLY SEQRES 11 A 187 VAL THR GLY VAL ALA GLY PHE THR ASN VAL LEU ARG MET SEQRES 12 A 187 LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU SEQRES 13 A 187 ALA LYS SER ARG TRP TYR ASN GLN CYS PRO ASP ARG ALA SEQRES 14 A 187 LYS ARG VAL ILE THR THR PHE ARG THR GLY THR TRP ASP SEQRES 15 A 187 ALA TYR LYS ASN LEU SEQRES 1 B 187 MET GLY HIS HIS HIS HIS HIS HIS ASP TYR ASP ILE PRO SEQRES 2 B 187 THR THR GLU ASN LEU TYR PHE GLN GLY SER MET ASN ILE SEQRES 3 B 187 PHE GLU MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS SEQRES 4 B 187 ILE TYR LYS ASP CYS GLU GLY TYR TYR THR ILE GLY ILE SEQRES 5 B 187 GLY HIS LEU LEU THR LYS SER PRO ASP LEU ASN ALA ALA SEQRES 6 B 187 LYS SER GLU LEU ASP LYS ALA ILE GLY ARG ASN CYS ASN SEQRES 7 B 187 GLY VAL ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN SEQRES 8 B 187 GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN SEQRES 9 B 187 ALA LYS LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL SEQRES 10 B 187 ARG ARG CYS ALA ALA ILE ASN HIS VAL PHE GLN MET GLY SEQRES 11 B 187 VAL THR GLY VAL ALA GLY PHE THR ASN VAL LEU ARG MET SEQRES 12 B 187 LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU SEQRES 13 B 187 ALA LYS SER ARG TRP TYR ASN GLN CYS PRO ASP ARG ALA SEQRES 14 B 187 LYS ARG VAL ILE THR THR PHE ARG THR GLY THR TRP ASP SEQRES 15 B 187 ALA TYR LYS ASN LEU HET BME A 201 4 HET 0R1 A 202 9 HET SO4 A 203 5 HET SO4 A 205 5 HET SO4 A 204 5 HET ACT A 206 4 HET BME A 207 4 HET ACT A 208 4 HET BME B 201 4 HET 0R1 B 202 9 HET SO4 B 203 5 HET SO4 B 204 5 HET ACT B 205 4 HET BME B 206 4 HET HED B 207 8 HETNAM BME BETA-MERCAPTOETHANOL HETNAM 0R1 1,2-BENZISOXAZOLE HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM HED 2-HYDROXYETHYL DISULFIDE FORMUL 3 BME 4(C2 H6 O S) FORMUL 4 0R1 2(C7 H5 N O) FORMUL 5 SO4 5(O4 S 2-) FORMUL 8 ACT 3(C2 H3 O2 1-) FORMUL 17 HED C4 H10 O2 S2 FORMUL 18 HOH *315(H2 O) HELIX 1 1 THR A -9 MET A 1 1 11 HELIX 2 2 ASN A 2 GLY A 12 1 11 HELIX 3 3 ASP A 38 GLY A 51 1 14 HELIX 4 4 THR A 59 ARG A 80 1 22 HELIX 5 5 LYS A 83 LEU A 91 1 9 HELIX 6 6 ASP A 92 GLY A 107 1 16 HELIX 7 7 GLY A 107 GLY A 113 1 7 HELIX 8 8 PHE A 114 GLN A 123 1 10 HELIX 9 9 ARG A 125 ALA A 134 1 10 HELIX 10 10 SER A 136 CYS A 142 1 7 HELIX 11 11 CYS A 142 GLY A 156 1 15 HELIX 12 12 TRP A 158 LYS A 162 5 5 HELIX 13 13 THR B -8 MET B 1 1 10 HELIX 14 14 ASN B 2 GLY B 12 1 11 HELIX 15 15 ASP B 38 GLY B 51 1 14 HELIX 16 16 THR B 59 ARG B 80 1 22 HELIX 17 17 LYS B 83 LEU B 91 1 9 HELIX 18 18 ASP B 92 GLY B 107 1 16 HELIX 19 19 GLY B 107 GLY B 113 1 7 HELIX 20 20 PHE B 114 GLN B 123 1 10 HELIX 21 21 ARG B 125 ALA B 134 1 10 HELIX 22 22 SER B 136 CYS B 142 1 7 HELIX 23 23 CYS B 142 GLY B 156 1 15 HELIX 24 24 TRP B 158 LYS B 162 5 5 SHEET 1 A 3 ARG A 14 LYS A 19 0 SHEET 2 A 3 TYR A 25 GLY A 28 -1 O THR A 26 N TYR A 18 SHEET 3 A 3 HIS A 31 LEU A 32 -1 O HIS A 31 N ILE A 27 SHEET 1 B 3 ARG B 14 LYS B 19 0 SHEET 2 B 3 TYR B 25 GLY B 28 -1 O THR B 26 N TYR B 18 SHEET 3 B 3 HIS B 31 THR B 34 -1 O LEU B 33 N TYR B 25 SSBOND 1 CYS A 21 CYS A 142 1555 1555 2.03 SSBOND 2 CYS B 21 CYS B 142 1555 1555 2.04 LINK SG CYS A 97 S2 BME A 201 1555 1555 2.07 LINK SG CYS B 97 S2 BME B 201 1555 1555 2.07 SITE 1 AC1 6 ILE A 3 ALA A 93 ARG A 96 CYS A 97 SITE 2 AC1 6 ILE A 100 HOH A 309 SITE 1 AC2 11 ILE A 78 LEU A 84 VAL A 87 TYR A 88 SITE 2 AC2 11 ALA A 99 HIS A 102 VAL A 103 VAL A 111 SITE 3 AC2 11 LEU A 118 LEU A 121 PHE A 153 SITE 1 AC3 5 ARG A 76 ARG A 80 HOH A 408 LYS B 135 SITE 2 AC3 5 HOH B 354 SITE 1 AC4 3 ARG A 119 ARG A 125 LYS B 48 SITE 1 AC5 5 ARG A 14 LEU A 15 LYS A 16 HOH A 319 SITE 2 AC5 5 HOH A 321 SITE 1 AC6 6 PHE A 4 ILE A 29 PHE A 67 HOH A 466 SITE 2 AC6 6 GLY B 51 HOH B 396 SITE 1 AC7 7 PHE A -3 TYR A 161 HOH A 311 HOH A 423 SITE 2 AC7 7 CYS B 54 ASN B 55 HOH B 331 SITE 1 AC8 5 LYS A 135 ARG B 76 ARG B 80 SO4 B 204 SITE 2 AC8 5 HOH B 401 SITE 1 AC9 3 ILE B 3 CYS B 97 ILE B 100 SITE 1 BC1 8 ILE B 78 LEU B 84 ALA B 99 HIS B 102 SITE 2 BC1 8 VAL B 103 VAL B 111 LEU B 121 PHE B 153 SITE 1 BC2 2 ARG B 119 ARG B 125 SITE 1 BC3 4 ACT A 208 ARG B 76 ARG B 80 HOH B 337 SITE 1 BC4 2 LEU B 15 LYS B 16 SITE 1 BC5 5 GLY B 30 LEU B 32 ASP B 70 PHE B 104 SITE 2 BC5 5 HOH B 335 SITE 1 BC6 6 THR A 109 HOH A 433 ALA B 130 ILE B 150 SITE 2 BC6 6 THR B 151 ARG B 154 CRYST1 48.300 75.370 52.650 90.00 93.15 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020704 0.000000 0.001139 0.00000 SCALE2 0.000000 0.013268 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019022 0.00000