HEADER TRANSFERASE 09-APR-12 4EKU TITLE CRYSTAL STRUCTURE OF FERM DOMAIN OF PROLINE-RICH TYROSINE KINASE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN-TYROSINE KINASE 2-BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 21-409; COMPND 5 SYNONYM: CALCIUM-DEPENDENT TYROSINE KINASE, CADTK, CALCIUM-REGULATED COMPND 6 NON-RECEPTOR PROLINE-RICH TYROSINE KINASE, CELL ADHESION KINASE BETA, COMPND 7 CAK-BETA, CAKB, FOCAL ADHESION KINASE 2, FADK 2, PROLINE-RICH COMPND 8 TYROSINE KINASE 2, RELATED ADHESION FOCAL TYROSINE KINASE, RAFTK; COMPND 9 EC: 2.7.10.2; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FAK2, NM4103, PTK2B, PYK2, RAFTK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS PROLINE-RICH TYROSINE KINASE 2; FERM DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.SAVARIMUTHU,R.LI,Y.WANG REVDAT 2 13-SEP-23 4EKU 1 SEQADV REVDAT 1 25-APR-12 4EKU 0 JRNL AUTH B.SAVARIMUTHU,R.LI,Y.WANG JRNL TITL CRYSTAL STRUCTURE OF THE FERM DOMAIN OF PROLINE-RICH JRNL TITL 2 TYROSINE KINASE 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 546 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 853 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2800 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2813 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 85.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 90.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.53000 REMARK 3 B22 (A**2) : -0.53000 REMARK 3 B33 (A**2) : 0.80000 REMARK 3 B12 (A**2) : -0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.334 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.341 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.229 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 29.600 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2868 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3869 ; 2.215 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 347 ; 8.337 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;40.580 ;24.685 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 535 ;24.733 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;22.120 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 423 ; 0.144 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2167 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1735 ; 0.934 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2802 ; 1.801 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1133 ; 2.330 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1067 ; 4.128 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 138 REMARK 3 ORIGIN FOR THE GROUP (A): 39.5360 13.4510 -26.8050 REMARK 3 T TENSOR REMARK 3 T11: 0.2746 T22: 0.5644 REMARK 3 T33: 0.2008 T12: -0.0954 REMARK 3 T13: 0.1149 T23: -0.2077 REMARK 3 L TENSOR REMARK 3 L11: 3.2763 L22: 8.4751 REMARK 3 L33: 3.9530 L12: -2.5839 REMARK 3 L13: -1.3141 L23: 3.3429 REMARK 3 S TENSOR REMARK 3 S11: 0.0840 S12: 0.3384 S13: 0.0600 REMARK 3 S21: 0.0683 S22: -0.1781 S23: 0.6404 REMARK 3 S31: -0.1987 S32: -0.1183 S33: 0.0941 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 139 A 264 REMARK 3 ORIGIN FOR THE GROUP (A): 48.7380 36.2210 -8.9620 REMARK 3 T TENSOR REMARK 3 T11: 0.5847 T22: 0.6715 REMARK 3 T33: 0.0916 T12: -0.0694 REMARK 3 T13: -0.0835 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 3.4384 L22: 12.2523 REMARK 3 L33: 3.0321 L12: 3.3006 REMARK 3 L13: 0.2590 L23: 2.9534 REMARK 3 S TENSOR REMARK 3 S11: -0.2486 S12: 0.4739 S13: 0.0032 REMARK 3 S21: 0.2308 S22: 0.2202 S23: -0.5851 REMARK 3 S31: -0.2025 S32: 0.6490 S33: 0.0284 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 265 A 366 REMARK 3 ORIGIN FOR THE GROUP (A): 20.8290 14.4360 -8.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.8562 T22: 0.5693 REMARK 3 T33: 0.8965 T12: -0.2200 REMARK 3 T13: 0.5448 T23: -0.2944 REMARK 3 L TENSOR REMARK 3 L11: 11.7341 L22: 6.9847 REMARK 3 L33: 6.0799 L12: -0.5832 REMARK 3 L13: -0.5776 L23: 2.1640 REMARK 3 S TENSOR REMARK 3 S11: -0.1142 S12: -0.1352 S13: -0.5265 REMARK 3 S21: 0.7066 S22: -0.3841 S23: 1.9709 REMARK 3 S31: 0.5098 S32: -0.7659 S33: 0.4983 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EKU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071744. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL (SI 111) REMARK 200 OPTICS : ROSENBAUM-ROCH DOUBLE XTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12393 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.250 REMARK 200 RESOLUTION RANGE LOW (A) : 49.564 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : 0.11300 REMARK 200 FOR THE DATA SET : 22.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 0.77400 REMARK 200 R SYM FOR SHELL (I) : 0.74400 REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2AL6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M AMMONIUM CITRATE TRIBASIC, PH 7.0, REMARK 280 0.1 M BIS-TRIS PROPANE PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.89000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.44500 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.44500 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.89000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -68.89000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 18 REMARK 465 ARG A 367 REMARK 465 LYS A 368 REMARK 465 ASP A 369 REMARK 465 GLY A 370 REMARK 465 GLU A 371 REMARK 465 LYS A 372 REMARK 465 ARG A 373 REMARK 465 ASN A 374 REMARK 465 SER A 375 REMARK 465 LEU A 376 REMARK 465 PRO A 377 REMARK 465 GLN A 378 REMARK 465 ILE A 379 REMARK 465 PRO A 380 REMARK 465 MET A 381 REMARK 465 LEU A 382 REMARK 465 ASN A 383 REMARK 465 LEU A 384 REMARK 465 GLU A 385 REMARK 465 ALA A 386 REMARK 465 ARG A 387 REMARK 465 ARG A 388 REMARK 465 SER A 389 REMARK 465 HIS A 390 REMARK 465 LEU A 391 REMARK 465 SER A 392 REMARK 465 GLU A 393 REMARK 465 SER A 394 REMARK 465 CYS A 395 REMARK 465 SER A 396 REMARK 465 ILE A 397 REMARK 465 GLU A 398 REMARK 465 SER A 399 REMARK 465 ASP A 400 REMARK 465 ILE A 401 REMARK 465 TYR A 402 REMARK 465 ALA A 403 REMARK 465 GLU A 404 REMARK 465 ILE A 405 REMARK 465 PRO A 406 REMARK 465 ASP A 407 REMARK 465 GLU A 408 REMARK 465 THR A 409 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 LYS A 295 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 118 N LEU A 121 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 44 CB CYS A 44 SG -0.127 REMARK 500 GLU A 101 CG GLU A 101 CD 0.100 REMARK 500 CYS A 246 CB CYS A 246 SG -0.109 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 82 C - N - CA ANGL. DEV. = 11.7 DEGREES REMARK 500 PRO A 107 C - N - CA ANGL. DEV. = 9.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 22 -173.76 -50.33 REMARK 500 SER A 47 156.38 176.77 REMARK 500 ASN A 48 34.28 -75.57 REMARK 500 PHE A 50 40.06 -84.44 REMARK 500 PRO A 52 -88.77 13.61 REMARK 500 CYS A 61 -159.98 -161.71 REMARK 500 VAL A 63 -32.62 -33.63 REMARK 500 SER A 77 -17.53 -48.36 REMARK 500 PRO A 82 -125.50 -78.83 REMARK 500 ASN A 83 92.73 -64.29 REMARK 500 LYS A 98 -73.18 -64.16 REMARK 500 ASP A 100 49.95 -103.34 REMARK 500 PRO A 107 -46.05 -27.77 REMARK 500 GLU A 119 -9.02 -56.03 REMARK 500 ARG A 134 -39.53 -137.11 REMARK 500 PHE A 140 -126.23 46.90 REMARK 500 MET A 141 -29.87 -39.28 REMARK 500 SER A 171 141.85 -36.85 REMARK 500 PHE A 187 56.21 -108.42 REMARK 500 LYS A 188 161.68 -44.00 REMARK 500 ASP A 189 -12.11 70.85 REMARK 500 ASN A 193 22.81 -140.89 REMARK 500 ALA A 194 -75.67 -48.71 REMARK 500 LEU A 195 -18.90 -36.58 REMARK 500 VAL A 208 -31.88 -132.04 REMARK 500 PHE A 257 -70.79 -92.10 REMARK 500 GLN A 271 -163.82 -165.76 REMARK 500 SER A 291 97.61 -55.97 REMARK 500 GLN A 292 -25.95 78.83 REMARK 500 ALA A 294 -35.17 -33.33 REMARK 500 SER A 307 115.63 -172.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 313 GLU A 314 -149.37 REMARK 500 REMARK 500 REMARK: NULL DBREF 4EKU A 21 409 UNP Q14289 FAK2_HUMAN 21 409 SEQADV 4EKU MET A 18 UNP Q14289 EXPRESSION TAG SEQADV 4EKU GLU A 19 UNP Q14289 EXPRESSION TAG SEQADV 4EKU LEU A 20 UNP Q14289 EXPRESSION TAG SEQRES 1 A 392 MET GLU LEU GLY PRO ALA GLU PRO MET VAL VAL VAL PRO SEQRES 2 A 392 VAL ASP VAL GLU LYS GLU ASP VAL ARG ILE LEU LYS VAL SEQRES 3 A 392 CYS PHE TYR SER ASN SER PHE ASN PRO GLY LYS ASN PHE SEQRES 4 A 392 LYS LEU VAL LYS CYS THR VAL GLN THR GLU ILE ARG GLU SEQRES 5 A 392 ILE ILE THR SER ILE LEU LEU SER GLY ARG ILE GLY PRO SEQRES 6 A 392 ASN ILE ARG LEU ALA GLU CYS TYR GLY LEU ARG LEU LYS SEQRES 7 A 392 HIS MET LYS SER ASP GLU ILE HIS TRP LEU HIS PRO GLN SEQRES 8 A 392 MET THR VAL GLY GLU VAL GLN ASP LYS TYR GLU CYS LEU SEQRES 9 A 392 HIS VAL GLU ALA GLU TRP ARG TYR ASP LEU GLN ILE ARG SEQRES 10 A 392 TYR LEU PRO GLU ASP PHE MET GLU SER LEU LYS GLU ASP SEQRES 11 A 392 ARG THR THR LEU LEU TYR PHE TYR GLN GLN LEU ARG ASN SEQRES 12 A 392 ASP TYR MET GLN ARG TYR ALA SER LYS VAL SER GLU GLY SEQRES 13 A 392 MET ALA LEU GLN LEU GLY CYS LEU GLU LEU ARG ARG PHE SEQRES 14 A 392 PHE LYS ASP MET PRO HIS ASN ALA LEU ASP LYS LYS SER SEQRES 15 A 392 ASN PHE GLU LEU LEU GLU LYS GLU VAL GLY LEU ASP LEU SEQRES 16 A 392 PHE PHE PRO LYS GLN MET GLN GLU ASN LEU LYS PRO LYS SEQRES 17 A 392 GLN PHE ARG LYS MET ILE GLN GLN THR PHE GLN GLN TYR SEQRES 18 A 392 ALA SER LEU ARG GLU GLU GLU CYS VAL MET LYS PHE PHE SEQRES 19 A 392 ASN THR LEU ALA GLY PHE ALA ASN ILE ASP GLN GLU THR SEQRES 20 A 392 TYR ARG CYS GLU LEU ILE GLN GLY TRP ASN ILE THR VAL SEQRES 21 A 392 ASP LEU VAL ILE GLY PRO LYS GLY ILE ARG GLN LEU THR SEQRES 22 A 392 SER GLN ASP ALA LYS PRO THR CYS LEU ALA GLU PHE LYS SEQRES 23 A 392 GLN ILE ARG SER ILE ARG CYS LEU PRO LEU GLU GLU GLY SEQRES 24 A 392 GLN ALA VAL LEU GLN LEU GLY ILE GLU GLY ALA PRO GLN SEQRES 25 A 392 ALA LEU SER ILE LYS THR SER SER LEU ALA GLU ALA GLU SEQRES 26 A 392 ASN MET ALA ASP LEU ILE ASP GLY TYR CYS ARG LEU GLN SEQRES 27 A 392 GLY GLU HIS GLN GLY SER LEU ILE ILE HIS PRO ARG LYS SEQRES 28 A 392 ASP GLY GLU LYS ARG ASN SER LEU PRO GLN ILE PRO MET SEQRES 29 A 392 LEU ASN LEU GLU ALA ARG ARG SER HIS LEU SER GLU SER SEQRES 30 A 392 CYS SER ILE GLU SER ASP ILE TYR ALA GLU ILE PRO ASP SEQRES 31 A 392 GLU THR HELIX 1 1 GLU A 34 GLU A 36 5 3 HELIX 2 2 ASN A 51 LYS A 54 5 4 HELIX 3 3 GLU A 66 SER A 77 1 12 HELIX 4 4 LEU A 86 GLU A 88 5 3 HELIX 5 5 THR A 110 TYR A 118 1 9 HELIX 6 6 VAL A 123 ALA A 125 5 3 HELIX 7 7 PHE A 140 LYS A 145 1 6 HELIX 8 8 ASP A 147 TYR A 166 1 20 HELIX 9 9 SER A 171 PHE A 187 1 17 HELIX 10 10 ASN A 193 ASP A 196 5 4 HELIX 11 11 LYS A 197 VAL A 208 1 12 HELIX 12 12 GLY A 209 PHE A 213 5 5 HELIX 13 13 PRO A 215 LEU A 222 1 8 HELIX 14 14 LYS A 223 ALA A 239 1 17 HELIX 15 15 ARG A 242 ALA A 255 1 14 HELIX 16 16 GLU A 301 ILE A 305 5 5 HELIX 17 17 SER A 337 GLY A 356 1 20 SHEET 1 A 5 ASN A 55 THR A 62 0 SHEET 2 A 5 VAL A 38 PHE A 45 -1 N ARG A 39 O CYS A 61 SHEET 3 A 5 TRP A 127 ILE A 133 1 O LEU A 131 N CYS A 44 SHEET 4 A 5 TYR A 90 HIS A 96 -1 N GLY A 91 O GLN A 132 SHEET 5 A 5 ILE A 102 LEU A 105 -1 O HIS A 103 N LEU A 94 SHEET 1 B 7 THR A 297 ALA A 300 0 SHEET 2 B 7 GLY A 285 LEU A 289 -1 N ILE A 286 O ALA A 300 SHEET 3 B 7 VAL A 277 GLY A 282 -1 N VAL A 280 O ARG A 287 SHEET 4 B 7 GLU A 263 ILE A 270 -1 N TYR A 265 O LEU A 279 SHEET 5 B 7 LEU A 331 THR A 335 -1 O SER A 332 N ILE A 270 SHEET 6 B 7 GLN A 317 LEU A 322 -1 N ALA A 318 O THR A 335 SHEET 7 B 7 CYS A 310 LEU A 313 -1 N LEU A 311 O VAL A 319 CRYST1 112.971 112.971 103.335 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008852 0.005111 0.000000 0.00000 SCALE2 0.000000 0.010221 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009677 0.00000