data_4EOT # _entry.id 4EOT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4EOT pdb_00004eot 10.2210/pdb4eot/pdb NDB NA1736 ? ? RCSB RCSB071885 ? ? WWPDB D_1000071885 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4EOT _pdbx_database_status.recvd_initial_deposition_date 2012-04-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lu, X.' 1 'Guanga, G.' 2 'Wan, C.' 3 'Rose, R.B.' 4 # _citation.id primary _citation.title ;A Novel DNA Binding Mechanism for maf Basic Region-Leucine Zipper Factors Inferred from a MafA-DNA Complex Structure and Binding Specificities. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 51 _citation.page_first 9706 _citation.page_last 9717 _citation.year 2012 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23148532 _citation.pdbx_database_id_DOI 10.1021/bi301248j # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lu, X.' 1 ? primary 'Guanga, G.P.' 2 ? primary 'Wan, C.' 3 ? primary 'Rose, R.B.' 4 ? # _cell.entry_id 4EOT _cell.length_a 116.100 _cell.length_b 116.100 _cell.length_c 85.080 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4EOT _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcription factor MafA' 11453.238 2 ? ? 'DNA-binding domain (UNP residues 226-318)' ? 2 polymer syn "5'-D(*CP*CP*GP*GP*TP*GP*CP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*GP*G)-3'" 5886.797 1 ? ? ? 'Maf-response element (MARE) upper strand' 3 polymer syn "5'-D(*CP*CP*CP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*GP*CP*AP*CP*CP*G)-3'" 5726.701 1 ? ? ? 'Maf-response element (MARE) bottom strand' 4 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 5 water nat water 18.015 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Pancreatic beta-cell-specific transcriptional activator, Transcription factor RIPE3b1, V-maf musculoaponeurotic fibrosarcoma oncogene homolog A ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSRFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRL AKERDLYKEKYEKLA ; ;GSRFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRL AKERDLYKEKYEKLA ; A,B ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DG)(DT)(DG)(DC)(DT)(DG)(DA)(DG)(DT)(DC)(DA)(DG)(DC)(DA)(DG)(DG)' CCGGTGCTGAGTCAGCAGG C ? 3 polydeoxyribonucleotide no no '(DC)(DC)(DC)(DT)(DG)(DC)(DT)(DG)(DA)(DC)(DT)(DC)(DA)(DG)(DC)(DA)(DC)(DC)(DG)' CCCTGCTGACTCAGCACCG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ARG n 1 4 PHE n 1 5 SER n 1 6 ASP n 1 7 ASP n 1 8 GLN n 1 9 LEU n 1 10 VAL n 1 11 SER n 1 12 MET n 1 13 SER n 1 14 VAL n 1 15 ARG n 1 16 GLU n 1 17 LEU n 1 18 ASN n 1 19 ARG n 1 20 GLN n 1 21 LEU n 1 22 ARG n 1 23 GLY n 1 24 PHE n 1 25 SER n 1 26 LYS n 1 27 GLU n 1 28 GLU n 1 29 VAL n 1 30 ILE n 1 31 ARG n 1 32 LEU n 1 33 LYS n 1 34 GLN n 1 35 LYS n 1 36 ARG n 1 37 ARG n 1 38 THR n 1 39 LEU n 1 40 LYS n 1 41 ASN n 1 42 ARG n 1 43 GLY n 1 44 TYR n 1 45 ALA n 1 46 GLN n 1 47 SER n 1 48 CYS n 1 49 ARG n 1 50 PHE n 1 51 LYS n 1 52 ARG n 1 53 VAL n 1 54 GLN n 1 55 GLN n 1 56 ARG n 1 57 HIS n 1 58 ILE n 1 59 LEU n 1 60 GLU n 1 61 SER n 1 62 GLU n 1 63 LYS n 1 64 CYS n 1 65 GLN n 1 66 LEU n 1 67 GLN n 1 68 SER n 1 69 GLN n 1 70 VAL n 1 71 GLU n 1 72 GLN n 1 73 LEU n 1 74 LYS n 1 75 LEU n 1 76 GLU n 1 77 VAL n 1 78 GLY n 1 79 ARG n 1 80 LEU n 1 81 ALA n 1 82 LYS n 1 83 GLU n 1 84 ARG n 1 85 ASP n 1 86 LEU n 1 87 TYR n 1 88 LYS n 1 89 GLU n 1 90 LYS n 1 91 TYR n 1 92 GLU n 1 93 LYS n 1 94 LEU n 1 95 ALA n 2 1 DC n 2 2 DC n 2 3 DG n 2 4 DG n 2 5 DT n 2 6 DG n 2 7 DC n 2 8 DT n 2 9 DG n 2 10 DA n 2 11 DG n 2 12 DT n 2 13 DC n 2 14 DA n 2 15 DG n 2 16 DC n 2 17 DA n 2 18 DG n 2 19 DG n 3 1 DC n 3 2 DC n 3 3 DC n 3 4 DT n 3 5 DG n 3 6 DC n 3 7 DT n 3 8 DG n 3 9 DA n 3 10 DC n 3 11 DT n 3 12 DC n 3 13 DA n 3 14 DG n 3 15 DC n 3 16 DA n 3 17 DC n 3 18 DC n 3 19 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MAFA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MAFA_HUMAN Q8NHW3 1 ;RFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAK ERDLYKEKYEKLA ; 226 ? 2 PDB 4EOT 4EOT 2 CCGGTGCTGAGTCAGCAGG 1 ? 3 PDB 4EOT 4EOT 3 CCCTGCTGACTCAGCACCG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4EOT A 3 ? 95 ? Q8NHW3 226 ? 318 ? 226 318 2 1 4EOT B 3 ? 95 ? Q8NHW3 226 ? 318 ? 226 318 3 2 4EOT C 1 ? 19 ? 4EOT 1 ? 19 ? 1 19 4 3 4EOT D 1 ? 19 ? 4EOT 1 ? 19 ? 1 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4EOT GLY A 1 ? UNP Q8NHW3 ? ? 'expression tag' 224 1 1 4EOT SER A 2 ? UNP Q8NHW3 ? ? 'expression tag' 225 2 2 4EOT GLY B 1 ? UNP Q8NHW3 ? ? 'expression tag' 224 3 2 4EOT SER B 2 ? UNP Q8NHW3 ? ? 'expression tag' 225 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4EOT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.80 _exptl_crystal.density_percent_sol 74.35 _exptl_crystal.description 'RMEASURE = 0.073 (0.798)' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '1.2 M ammonium sulfate, 100 mM sodium acetate, pH 4.5, one week of growth, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2008-04-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 4EOT _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.855 _reflns.number_obs 15793 _reflns.number_all 15399 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.55 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.855 3.00 85.1 ? ? 3.03 9.4 ? ? ? ? ? ? 1 1 3.00 3.30 99.9 ? ? ? ? ? ? ? ? ? ? 2 1 3.30 3.60 100.0 ? ? ? ? ? ? ? ? ? ? 3 1 3.60 4.00 100.0 ? ? ? ? ? ? ? ? ? ? 4 1 # _refine.entry_id 4EOT _refine.ls_number_reflns_obs 15288 _refine.ls_number_reflns_all 15793 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.02 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.972 _refine.ls_d_res_high 2.855 _refine.ls_percent_reflns_obs 97.54 _refine.ls_R_factor_obs 0.2227 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2208 _refine.ls_R_factor_R_free 0.2595 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.02 _refine.ls_number_reflns_R_free 768 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.2782 _refine.aniso_B[2][2] 0.2782 _refine.aniso_B[3][3] -0.5564 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.342 _refine.solvent_model_param_bsol 80.996 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.98 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3A5T' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.44 _refine.pdbx_overall_phase_error 25.93 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1360 _refine_hist.pdbx_number_atoms_nucleic_acid 770 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 2149 _refine_hist.d_res_high 2.855 _refine_hist.d_res_low 19.972 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.002 ? ? 2266 ? 'X-RAY DIFFRACTION' f_angle_d 0.696 ? ? 3211 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 22.463 ? ? 888 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.036 ? ? 364 ? 'X-RAY DIFFRACTION' f_plane_restr 0.001 ? ? 280 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.855 3.0752 2697 0.3124 91.0 0.3957 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.0752 3.3833 2889 0.1972 99.0 0.2269 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.3833 3.8698 2899 0.2111 98.0 0.2956 . . 155 . . . . 'X-RAY DIFFRACTION' . 3.8698 4.8638 2964 0.2020 100.0 0.2420 . . 156 . . . . 'X-RAY DIFFRACTION' . 4.8638 19.9720 3071 0.2303 100.0 0.2491 . . 162 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4EOT _struct.title 'Crystal structure of the MafA homodimer bound to the consensus MARE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4EOT _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'leucine zipper, transcription factor, DNA binding, nucleus, TRANSCRIPTION-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 5 ? MET A 12 ? SER A 228 MET A 235 1 ? 8 HELX_P HELX_P2 2 SER A 13 ? LEU A 21 ? SER A 236 LEU A 244 1 ? 9 HELX_P HELX_P3 3 SER A 25 ? LEU A 94 ? SER A 248 LEU A 317 1 ? 70 HELX_P HELX_P4 4 SER B 5 ? MET B 12 ? SER B 228 MET B 235 1 ? 8 HELX_P HELX_P5 5 SER B 13 ? LEU B 21 ? SER B 236 LEU B 244 1 ? 9 HELX_P HELX_P6 6 SER B 25 ? LEU B 94 ? SER B 248 LEU B 317 1 ? 70 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 19 N1 ? ? C DC 2 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 19 O6 ? ? C DC 2 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 19 N2 ? ? C DC 2 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 18 O2 ? ? C DG 3 D DC 18 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog5 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 17 N3 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 17 O2 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 17 N4 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DT 5 N3 ? ? ? 1_555 D DA 16 N1 ? ? C DT 5 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DT 5 O4 ? ? ? 1_555 D DA 16 N6 ? ? C DT 5 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 15 N3 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 15 O2 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 15 N4 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 14 N1 ? ? C DC 7 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 14 O6 ? ? C DC 7 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 14 N2 ? ? C DC 7 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 13 N1 ? ? C DT 8 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 13 N6 ? ? C DT 8 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG 9 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG 9 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG 9 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 11 N3 ? ? C DA 10 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 11 O4 ? ? C DA 10 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 10 N3 ? ? C DG 11 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 10 O2 ? ? C DG 11 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 10 N4 ? ? C DG 11 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 12 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 12 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 13 N3 ? ? ? 1_555 D DG 8 N1 ? ? C DC 13 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DC 13 N4 ? ? ? 1_555 D DG 8 O6 ? ? C DC 13 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 13 O2 ? ? ? 1_555 D DG 8 N2 ? ? C DC 13 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 14 N1 ? ? ? 1_555 D DT 7 N3 ? ? C DA 14 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DA 14 N6 ? ? ? 1_555 D DT 7 O4 ? ? C DA 14 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 15 N1 ? ? ? 1_555 D DC 6 N3 ? ? C DG 15 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 15 N2 ? ? ? 1_555 D DC 6 O2 ? ? C DG 15 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 15 O6 ? ? ? 1_555 D DC 6 N4 ? ? C DG 15 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 16 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 16 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 16 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 17 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 17 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 17 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DG 18 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 18 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DG 18 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 18 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DG 18 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 18 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DG 19 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 19 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DG 19 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 19 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DG 19 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 19 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 401 ? 2 'BINDING SITE FOR RESIDUE SO4 A 401' AC2 Software A SO4 402 ? 5 'BINDING SITE FOR RESIDUE SO4 A 402' AC3 Software B SO4 401 ? 3 'BINDING SITE FOR RESIDUE SO4 B 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ASP A 6 ? ASP A 229 . ? 1_555 ? 2 AC1 2 ARG A 42 ? ARG A 265 . ? 1_555 ? 3 AC2 5 ARG A 49 ? ARG A 272 . ? 1_555 ? 4 AC2 5 ARG A 52 ? ARG A 275 . ? 1_555 ? 5 AC2 5 ARG B 49 ? ARG B 272 . ? 1_555 ? 6 AC2 5 ARG B 52 ? ARG B 275 . ? 1_555 ? 7 AC2 5 DC D 10 ? DC D 10 . ? 1_555 ? 8 AC3 3 ARG A 79 ? ARG A 302 . ? 1_555 ? 9 AC3 3 ARG B 84 ? ARG B 307 . ? 1_555 ? 10 AC3 3 LYS B 88 ? LYS B 311 . ? 5_553 ? # _database_PDB_matrix.entry_id 4EOT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4EOT _atom_sites.fract_transf_matrix[1][1] 0.008613 _atom_sites.fract_transf_matrix[1][2] 0.004973 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009946 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011754 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 224 ? ? ? A . n A 1 2 SER 2 225 ? ? ? A . n A 1 3 ARG 3 226 226 ARG ARG A . n A 1 4 PHE 4 227 227 PHE PHE A . n A 1 5 SER 5 228 228 SER SER A . n A 1 6 ASP 6 229 229 ASP ASP A . n A 1 7 ASP 7 230 230 ASP ASP A . n A 1 8 GLN 8 231 231 GLN GLN A . n A 1 9 LEU 9 232 232 LEU LEU A . n A 1 10 VAL 10 233 233 VAL VAL A . n A 1 11 SER 11 234 234 SER SER A . n A 1 12 MET 12 235 235 MET MET A . n A 1 13 SER 13 236 236 SER SER A . n A 1 14 VAL 14 237 237 VAL VAL A . n A 1 15 ARG 15 238 238 ARG ARG A . n A 1 16 GLU 16 239 239 GLU GLU A . n A 1 17 LEU 17 240 240 LEU LEU A . n A 1 18 ASN 18 241 241 ASN ASN A . n A 1 19 ARG 19 242 242 ARG ARG A . n A 1 20 GLN 20 243 243 GLN GLN A . n A 1 21 LEU 21 244 244 LEU LEU A . n A 1 22 ARG 22 245 245 ARG ARG A . n A 1 23 GLY 23 246 246 GLY GLY A . n A 1 24 PHE 24 247 247 PHE PHE A . n A 1 25 SER 25 248 248 SER SER A . n A 1 26 LYS 26 249 249 LYS LYS A . n A 1 27 GLU 27 250 250 GLU GLU A . n A 1 28 GLU 28 251 251 GLU GLU A . n A 1 29 VAL 29 252 252 VAL VAL A . n A 1 30 ILE 30 253 253 ILE ILE A . n A 1 31 ARG 31 254 254 ARG ARG A . n A 1 32 LEU 32 255 255 LEU LEU A . n A 1 33 LYS 33 256 256 LYS LYS A . n A 1 34 GLN 34 257 257 GLN GLN A . n A 1 35 LYS 35 258 258 LYS LYS A . n A 1 36 ARG 36 259 259 ARG ARG A . n A 1 37 ARG 37 260 260 ARG ARG A . n A 1 38 THR 38 261 261 THR THR A . n A 1 39 LEU 39 262 262 LEU LEU A . n A 1 40 LYS 40 263 263 LYS LYS A . n A 1 41 ASN 41 264 264 ASN ASN A . n A 1 42 ARG 42 265 265 ARG ARG A . n A 1 43 GLY 43 266 266 GLY GLY A . n A 1 44 TYR 44 267 267 TYR TYR A . n A 1 45 ALA 45 268 268 ALA ALA A . n A 1 46 GLN 46 269 269 GLN GLN A . n A 1 47 SER 47 270 270 SER SER A . n A 1 48 CYS 48 271 271 CYS CYS A . n A 1 49 ARG 49 272 272 ARG ARG A . n A 1 50 PHE 50 273 273 PHE PHE A . n A 1 51 LYS 51 274 274 LYS LYS A . n A 1 52 ARG 52 275 275 ARG ARG A . n A 1 53 VAL 53 276 276 VAL VAL A . n A 1 54 GLN 54 277 277 GLN GLN A . n A 1 55 GLN 55 278 278 GLN GLN A . n A 1 56 ARG 56 279 279 ARG ARG A . n A 1 57 HIS 57 280 280 HIS HIS A . n A 1 58 ILE 58 281 281 ILE ILE A . n A 1 59 LEU 59 282 282 LEU LEU A . n A 1 60 GLU 60 283 283 GLU GLU A . n A 1 61 SER 61 284 284 SER SER A . n A 1 62 GLU 62 285 285 GLU GLU A . n A 1 63 LYS 63 286 286 LYS LYS A . n A 1 64 CYS 64 287 287 CYS CYS A . n A 1 65 GLN 65 288 288 GLN GLN A . n A 1 66 LEU 66 289 289 LEU LEU A . n A 1 67 GLN 67 290 290 GLN GLN A . n A 1 68 SER 68 291 291 SER SER A . n A 1 69 GLN 69 292 292 GLN GLN A . n A 1 70 VAL 70 293 293 VAL VAL A . n A 1 71 GLU 71 294 294 GLU GLU A . n A 1 72 GLN 72 295 295 GLN GLN A . n A 1 73 LEU 73 296 296 LEU LEU A . n A 1 74 LYS 74 297 297 LYS LYS A . n A 1 75 LEU 75 298 298 LEU LEU A . n A 1 76 GLU 76 299 299 GLU GLU A . n A 1 77 VAL 77 300 300 VAL VAL A . n A 1 78 GLY 78 301 301 GLY GLY A . n A 1 79 ARG 79 302 302 ARG ARG A . n A 1 80 LEU 80 303 303 LEU LEU A . n A 1 81 ALA 81 304 304 ALA ALA A . n A 1 82 LYS 82 305 305 LYS LYS A . n A 1 83 GLU 83 306 306 GLU GLU A . n A 1 84 ARG 84 307 307 ARG ARG A . n A 1 85 ASP 85 308 308 ASP ASP A . n A 1 86 LEU 86 309 309 LEU LEU A . n A 1 87 TYR 87 310 310 TYR TYR A . n A 1 88 LYS 88 311 311 LYS LYS A . n A 1 89 GLU 89 312 312 GLU GLU A . n A 1 90 LYS 90 313 313 LYS LYS A . n A 1 91 TYR 91 314 314 TYR TYR A . n A 1 92 GLU 92 315 315 GLU GLU A . n A 1 93 LYS 93 316 316 LYS LYS A . n A 1 94 LEU 94 317 317 LEU LEU A . n A 1 95 ALA 95 318 ? ? ? A . n B 1 1 GLY 1 224 ? ? ? B . n B 1 2 SER 2 225 ? ? ? B . n B 1 3 ARG 3 226 ? ? ? B . n B 1 4 PHE 4 227 227 PHE PHE B . n B 1 5 SER 5 228 228 SER SER B . n B 1 6 ASP 6 229 229 ASP ASP B . n B 1 7 ASP 7 230 230 ASP ASP B . n B 1 8 GLN 8 231 231 GLN GLN B . n B 1 9 LEU 9 232 232 LEU LEU B . n B 1 10 VAL 10 233 233 VAL VAL B . n B 1 11 SER 11 234 234 SER SER B . n B 1 12 MET 12 235 235 MET MET B . n B 1 13 SER 13 236 236 SER SER B . n B 1 14 VAL 14 237 237 VAL VAL B . n B 1 15 ARG 15 238 238 ARG ARG B . n B 1 16 GLU 16 239 239 GLU GLU B . n B 1 17 LEU 17 240 240 LEU LEU B . n B 1 18 ASN 18 241 241 ASN ASN B . n B 1 19 ARG 19 242 242 ARG ARG B . n B 1 20 GLN 20 243 243 GLN GLN B . n B 1 21 LEU 21 244 244 LEU LEU B . n B 1 22 ARG 22 245 245 ARG ARG B . n B 1 23 GLY 23 246 246 GLY GLY B . n B 1 24 PHE 24 247 247 PHE PHE B . n B 1 25 SER 25 248 248 SER SER B . n B 1 26 LYS 26 249 249 LYS LYS B . n B 1 27 GLU 27 250 250 GLU GLU B . n B 1 28 GLU 28 251 251 GLU GLU B . n B 1 29 VAL 29 252 252 VAL VAL B . n B 1 30 ILE 30 253 253 ILE ILE B . n B 1 31 ARG 31 254 254 ARG ARG B . n B 1 32 LEU 32 255 255 LEU LEU B . n B 1 33 LYS 33 256 256 LYS LYS B . n B 1 34 GLN 34 257 257 GLN GLN B . n B 1 35 LYS 35 258 258 LYS LYS B . n B 1 36 ARG 36 259 259 ARG ARG B . n B 1 37 ARG 37 260 260 ARG ARG B . n B 1 38 THR 38 261 261 THR THR B . n B 1 39 LEU 39 262 262 LEU LEU B . n B 1 40 LYS 40 263 263 LYS LYS B . n B 1 41 ASN 41 264 264 ASN ASN B . n B 1 42 ARG 42 265 265 ARG ARG B . n B 1 43 GLY 43 266 266 GLY GLY B . n B 1 44 TYR 44 267 267 TYR TYR B . n B 1 45 ALA 45 268 268 ALA ALA B . n B 1 46 GLN 46 269 269 GLN GLN B . n B 1 47 SER 47 270 270 SER SER B . n B 1 48 CYS 48 271 271 CYS CYS B . n B 1 49 ARG 49 272 272 ARG ARG B . n B 1 50 PHE 50 273 273 PHE PHE B . n B 1 51 LYS 51 274 274 LYS LYS B . n B 1 52 ARG 52 275 275 ARG ARG B . n B 1 53 VAL 53 276 276 VAL VAL B . n B 1 54 GLN 54 277 277 GLN GLN B . n B 1 55 GLN 55 278 278 GLN GLN B . n B 1 56 ARG 56 279 279 ARG ARG B . n B 1 57 HIS 57 280 280 HIS HIS B . n B 1 58 ILE 58 281 281 ILE ILE B . n B 1 59 LEU 59 282 282 LEU LEU B . n B 1 60 GLU 60 283 283 GLU GLU B . n B 1 61 SER 61 284 284 SER SER B . n B 1 62 GLU 62 285 285 GLU GLU B . n B 1 63 LYS 63 286 286 LYS LYS B . n B 1 64 CYS 64 287 287 CYS CYS B . n B 1 65 GLN 65 288 288 GLN GLN B . n B 1 66 LEU 66 289 289 LEU LEU B . n B 1 67 GLN 67 290 290 GLN GLN B . n B 1 68 SER 68 291 291 SER SER B . n B 1 69 GLN 69 292 292 GLN GLN B . n B 1 70 VAL 70 293 293 VAL VAL B . n B 1 71 GLU 71 294 294 GLU GLU B . n B 1 72 GLN 72 295 295 GLN GLN B . n B 1 73 LEU 73 296 296 LEU LEU B . n B 1 74 LYS 74 297 297 LYS LYS B . n B 1 75 LEU 75 298 298 LEU LEU B . n B 1 76 GLU 76 299 299 GLU GLU B . n B 1 77 VAL 77 300 300 VAL VAL B . n B 1 78 GLY 78 301 301 GLY GLY B . n B 1 79 ARG 79 302 302 ARG ARG B . n B 1 80 LEU 80 303 303 LEU LEU B . n B 1 81 ALA 81 304 304 ALA ALA B . n B 1 82 LYS 82 305 305 LYS LYS B . n B 1 83 GLU 83 306 306 GLU GLU B . n B 1 84 ARG 84 307 307 ARG ARG B . n B 1 85 ASP 85 308 308 ASP ASP B . n B 1 86 LEU 86 309 309 LEU LEU B . n B 1 87 TYR 87 310 310 TYR TYR B . n B 1 88 LYS 88 311 311 LYS LYS B . n B 1 89 GLU 89 312 312 GLU GLU B . n B 1 90 LYS 90 313 313 LYS LYS B . n B 1 91 TYR 91 314 314 TYR TYR B . n B 1 92 GLU 92 315 315 GLU GLU B . n B 1 93 LYS 93 316 316 LYS LYS B . n B 1 94 LEU 94 317 317 LEU LEU B . n B 1 95 ALA 95 318 318 ALA ALA B . n C 2 1 DC 1 1 1 DC DC C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DG 3 3 3 DG DG C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DT 5 5 5 DT DT C . n C 2 6 DG 6 6 6 DG DG C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DG 9 9 9 DG DG C . n C 2 10 DA 10 10 10 DA DA C . n C 2 11 DG 11 11 11 DG DG C . n C 2 12 DT 12 12 12 DT DT C . n C 2 13 DC 13 13 13 DC DC C . n C 2 14 DA 14 14 14 DA DA C . n C 2 15 DG 15 15 15 DG DG C . n C 2 16 DC 16 16 16 DC DC C . n C 2 17 DA 17 17 17 DA DA C . n C 2 18 DG 18 18 18 DG DG C . n C 2 19 DG 19 19 19 DG DG C . n D 3 1 DC 1 1 1 DC DC D . n D 3 2 DC 2 2 2 DC DC D . n D 3 3 DC 3 3 3 DC DC D . n D 3 4 DT 4 4 4 DT DT D . n D 3 5 DG 5 5 5 DG DG D . n D 3 6 DC 6 6 6 DC DC D . n D 3 7 DT 7 7 7 DT DT D . n D 3 8 DG 8 8 8 DG DG D . n D 3 9 DA 9 9 9 DA DA D . n D 3 10 DC 10 10 10 DC DC D . n D 3 11 DT 11 11 11 DT DT D . n D 3 12 DC 12 12 12 DC DC D . n D 3 13 DA 13 13 13 DA DA D . n D 3 14 DG 14 14 14 DG DG D . n D 3 15 DC 15 15 15 DC DC D . n D 3 16 DA 16 16 16 DA DA D . n D 3 17 DC 17 17 17 DC DC D . n D 3 18 DC 18 18 18 DC DC D . n D 3 19 DG 19 19 19 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 SO4 1 401 2 SO4 SO4 A . F 4 SO4 1 402 3 SO4 SO4 A . G 4 SO4 1 401 1 SO4 SO4 B . H 5 HOH 1 501 2 HOH HOH A . I 5 HOH 1 501 1 HOH HOH B . I 5 HOH 2 502 3 HOH HOH B . I 5 HOH 3 503 4 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7560 ? 1 MORE -98 ? 1 'SSA (A^2)' 17180 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-11-28 2 'Structure model' 1 1 2012-12-26 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -46.4835 17.7656 -19.4154 0.7526 0.2876 0.3744 -0.0068 -0.0741 0.0644 0.3736 3.8577 5.7450 -0.1938 -0.0318 4.1774 0.1067 0.1262 0.1692 -0.5870 -0.4158 0.1731 -0.4946 0.0565 0.2599 'X-RAY DIFFRACTION' 2 ? refined -42.2017 0.9015 -11.4022 0.7464 0.3376 0.2815 0.0804 -0.0121 0.0736 1.3263 0.6045 6.2783 0.1033 -1.1638 0.8020 0.1158 -0.1978 -0.1352 0.0576 -0.2867 0.0183 0.3595 0.7220 0.3048 'X-RAY DIFFRACTION' 3 ? refined -48.7784 17.7927 -0.5718 0.8824 0.3999 0.7192 -0.5122 0.0969 -0.2313 2.2790 4.0795 1.2085 0.2563 0.0561 -0.5365 -0.0827 -0.0699 0.1786 -0.1490 -0.0072 -0.2650 -0.1720 0.2315 -0.0112 'X-RAY DIFFRACTION' 4 ? refined -48.3734 15.8863 -0.1199 0.5695 0.1278 0.5885 -0.3896 -0.0149 -0.1355 1.0739 1.8035 1.6085 -0.2452 0.3267 1.1120 -0.0100 -0.1659 0.5003 0.0953 -0.2086 -0.1180 -0.2442 0.1022 -0.1923 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'chain A' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain B' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'chain C' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'chain D' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" C DG 15 ? ? "C2'" C DG 15 ? ? "C1'" C DG 15 ? ? 96.93 102.40 -5.47 0.80 N 2 1 "O4'" C DG 15 ? ? "C1'" C DG 15 ? ? N9 C DG 15 ? ? 111.63 108.30 3.33 0.30 N 3 1 "O4'" D DG 14 ? ? "C1'" D DG 14 ? ? N9 D DG 14 ? ? 110.71 108.30 2.41 0.30 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 226 ? NE ? A ARG 3 NE 2 1 Y 1 A ARG 226 ? CZ ? A ARG 3 CZ 3 1 Y 1 A ARG 226 ? NH1 ? A ARG 3 NH1 4 1 Y 1 A ARG 226 ? NH2 ? A ARG 3 NH2 5 1 Y 1 A PHE 227 ? CG ? A PHE 4 CG 6 1 Y 1 A PHE 227 ? CD1 ? A PHE 4 CD1 7 1 Y 1 A PHE 227 ? CD2 ? A PHE 4 CD2 8 1 Y 1 A PHE 227 ? CE1 ? A PHE 4 CE1 9 1 Y 1 A PHE 227 ? CE2 ? A PHE 4 CE2 10 1 Y 1 A PHE 227 ? CZ ? A PHE 4 CZ 11 1 Y 1 A ASP 230 ? CG ? A ASP 7 CG 12 1 Y 1 A ASP 230 ? OD1 ? A ASP 7 OD1 13 1 Y 1 A ASP 230 ? OD2 ? A ASP 7 OD2 14 1 Y 1 A GLN 231 ? CG ? A GLN 8 CG 15 1 Y 1 A GLN 231 ? CD ? A GLN 8 CD 16 1 Y 1 A GLN 231 ? OE1 ? A GLN 8 OE1 17 1 Y 1 A GLN 231 ? NE2 ? A GLN 8 NE2 18 1 Y 1 A ARG 238 ? CG ? A ARG 15 CG 19 1 Y 1 A ARG 238 ? CD ? A ARG 15 CD 20 1 Y 1 A ARG 238 ? NE ? A ARG 15 NE 21 1 Y 1 A ARG 238 ? CZ ? A ARG 15 CZ 22 1 Y 1 A ARG 238 ? NH1 ? A ARG 15 NH1 23 1 Y 1 A ARG 238 ? NH2 ? A ARG 15 NH2 24 1 Y 1 A LEU 240 ? CD1 ? A LEU 17 CD1 25 1 Y 1 A LEU 240 ? CD2 ? A LEU 17 CD2 26 1 Y 1 A ARG 242 ? CG ? A ARG 19 CG 27 1 Y 1 A ARG 242 ? CD ? A ARG 19 CD 28 1 Y 1 A ARG 242 ? NE ? A ARG 19 NE 29 1 Y 1 A ARG 242 ? CZ ? A ARG 19 CZ 30 1 Y 1 A ARG 242 ? NH1 ? A ARG 19 NH1 31 1 Y 1 A ARG 242 ? NH2 ? A ARG 19 NH2 32 1 Y 1 A ARG 245 ? CZ ? A ARG 22 CZ 33 1 Y 1 A ARG 245 ? NH1 ? A ARG 22 NH1 34 1 Y 1 A ARG 245 ? NH2 ? A ARG 22 NH2 35 1 Y 1 A GLU 250 ? CG ? A GLU 27 CG 36 1 Y 1 A GLU 250 ? CD ? A GLU 27 CD 37 1 Y 1 A GLU 250 ? OE1 ? A GLU 27 OE1 38 1 Y 1 A GLU 250 ? OE2 ? A GLU 27 OE2 39 1 Y 1 A GLU 251 ? CD ? A GLU 28 CD 40 1 Y 1 A GLU 251 ? OE1 ? A GLU 28 OE1 41 1 Y 1 A GLU 251 ? OE2 ? A GLU 28 OE2 42 1 Y 1 A ARG 254 ? CD ? A ARG 31 CD 43 1 Y 1 A ARG 254 ? NE ? A ARG 31 NE 44 1 Y 1 A ARG 254 ? CZ ? A ARG 31 CZ 45 1 Y 1 A ARG 254 ? NH1 ? A ARG 31 NH1 46 1 Y 1 A ARG 254 ? NH2 ? A ARG 31 NH2 47 1 Y 1 A LEU 255 ? CG ? A LEU 32 CG 48 1 Y 1 A LEU 255 ? CD1 ? A LEU 32 CD1 49 1 Y 1 A LEU 255 ? CD2 ? A LEU 32 CD2 50 1 Y 1 A LYS 256 ? CD ? A LYS 33 CD 51 1 Y 1 A LYS 256 ? CE ? A LYS 33 CE 52 1 Y 1 A LYS 256 ? NZ ? A LYS 33 NZ 53 1 Y 1 A GLN 257 ? CD ? A GLN 34 CD 54 1 Y 1 A GLN 257 ? OE1 ? A GLN 34 OE1 55 1 Y 1 A GLN 257 ? NE2 ? A GLN 34 NE2 56 1 Y 1 A LYS 258 ? CD ? A LYS 35 CD 57 1 Y 1 A LYS 258 ? CE ? A LYS 35 CE 58 1 Y 1 A LYS 258 ? NZ ? A LYS 35 NZ 59 1 Y 1 A LYS 263 ? CD ? A LYS 40 CD 60 1 Y 1 A LYS 263 ? CE ? A LYS 40 CE 61 1 Y 1 A LYS 263 ? NZ ? A LYS 40 NZ 62 1 Y 1 A LYS 274 ? CG ? A LYS 51 CG 63 1 Y 1 A LYS 274 ? CD ? A LYS 51 CD 64 1 Y 1 A LYS 274 ? CE ? A LYS 51 CE 65 1 Y 1 A LYS 274 ? NZ ? A LYS 51 NZ 66 1 Y 1 A GLN 278 ? CD ? A GLN 55 CD 67 1 Y 1 A GLN 278 ? OE1 ? A GLN 55 OE1 68 1 Y 1 A GLN 278 ? NE2 ? A GLN 55 NE2 69 1 Y 1 A ARG 279 ? CD ? A ARG 56 CD 70 1 Y 1 A ARG 279 ? NE ? A ARG 56 NE 71 1 Y 1 A ARG 279 ? CZ ? A ARG 56 CZ 72 1 Y 1 A ARG 279 ? NH1 ? A ARG 56 NH1 73 1 Y 1 A ARG 279 ? NH2 ? A ARG 56 NH2 74 1 Y 1 A GLU 283 ? CD ? A GLU 60 CD 75 1 Y 1 A GLU 283 ? OE1 ? A GLU 60 OE1 76 1 Y 1 A GLU 283 ? OE2 ? A GLU 60 OE2 77 1 Y 1 A GLN 288 ? CG ? A GLN 65 CG 78 1 Y 1 A GLN 288 ? CD ? A GLN 65 CD 79 1 Y 1 A GLN 288 ? OE1 ? A GLN 65 OE1 80 1 Y 1 A GLN 288 ? NE2 ? A GLN 65 NE2 81 1 Y 1 A LYS 297 ? CD ? A LYS 74 CD 82 1 Y 1 A LYS 297 ? CE ? A LYS 74 CE 83 1 Y 1 A LYS 297 ? NZ ? A LYS 74 NZ 84 1 Y 1 A LYS 305 ? CD ? A LYS 82 CD 85 1 Y 1 A LYS 305 ? CE ? A LYS 82 CE 86 1 Y 1 A LYS 305 ? NZ ? A LYS 82 NZ 87 1 Y 1 A GLU 306 ? OE1 ? A GLU 83 OE1 88 1 Y 1 A GLU 306 ? OE2 ? A GLU 83 OE2 89 1 Y 1 A LEU 309 ? CD1 ? A LEU 86 CD1 90 1 Y 1 A LEU 309 ? CD2 ? A LEU 86 CD2 91 1 Y 1 A LYS 311 ? CG ? A LYS 88 CG 92 1 Y 1 A LYS 311 ? CD ? A LYS 88 CD 93 1 Y 1 A LYS 311 ? CE ? A LYS 88 CE 94 1 Y 1 A LYS 311 ? NZ ? A LYS 88 NZ 95 1 Y 1 A GLU 312 ? CG ? A GLU 89 CG 96 1 Y 1 A GLU 312 ? CD ? A GLU 89 CD 97 1 Y 1 A GLU 312 ? OE1 ? A GLU 89 OE1 98 1 Y 1 A GLU 312 ? OE2 ? A GLU 89 OE2 99 1 Y 1 A LYS 313 ? CD ? A LYS 90 CD 100 1 Y 1 A LYS 313 ? CE ? A LYS 90 CE 101 1 Y 1 A LYS 313 ? NZ ? A LYS 90 NZ 102 1 Y 1 A GLU 315 ? CG ? A GLU 92 CG 103 1 Y 1 A GLU 315 ? CD ? A GLU 92 CD 104 1 Y 1 A GLU 315 ? OE1 ? A GLU 92 OE1 105 1 Y 1 A GLU 315 ? OE2 ? A GLU 92 OE2 106 1 Y 1 A LYS 316 ? CG ? A LYS 93 CG 107 1 Y 1 A LYS 316 ? CD ? A LYS 93 CD 108 1 Y 1 A LYS 316 ? CE ? A LYS 93 CE 109 1 Y 1 A LYS 316 ? NZ ? A LYS 93 NZ 110 1 Y 1 A LEU 317 ? CG ? A LEU 94 CG 111 1 Y 1 A LEU 317 ? CD1 ? A LEU 94 CD1 112 1 Y 1 A LEU 317 ? CD2 ? A LEU 94 CD2 113 1 Y 1 B ARG 238 ? CG ? B ARG 15 CG 114 1 Y 1 B ARG 238 ? CD ? B ARG 15 CD 115 1 Y 1 B ARG 238 ? NE ? B ARG 15 NE 116 1 Y 1 B ARG 238 ? CZ ? B ARG 15 CZ 117 1 Y 1 B ARG 238 ? NH1 ? B ARG 15 NH1 118 1 Y 1 B ARG 238 ? NH2 ? B ARG 15 NH2 119 1 Y 1 B GLU 239 ? CD ? B GLU 16 CD 120 1 Y 1 B GLU 239 ? OE1 ? B GLU 16 OE1 121 1 Y 1 B GLU 239 ? OE2 ? B GLU 16 OE2 122 1 Y 1 B ARG 242 ? CG ? B ARG 19 CG 123 1 Y 1 B ARG 242 ? CD ? B ARG 19 CD 124 1 Y 1 B ARG 242 ? NE ? B ARG 19 NE 125 1 Y 1 B ARG 242 ? CZ ? B ARG 19 CZ 126 1 Y 1 B ARG 242 ? NH1 ? B ARG 19 NH1 127 1 Y 1 B ARG 242 ? NH2 ? B ARG 19 NH2 128 1 Y 1 B GLN 243 ? CD ? B GLN 20 CD 129 1 Y 1 B GLN 243 ? OE1 ? B GLN 20 OE1 130 1 Y 1 B GLN 243 ? NE2 ? B GLN 20 NE2 131 1 Y 1 B LEU 244 ? CG ? B LEU 21 CG 132 1 Y 1 B LEU 244 ? CD1 ? B LEU 21 CD1 133 1 Y 1 B LEU 244 ? CD2 ? B LEU 21 CD2 134 1 Y 1 B ARG 245 ? CG ? B ARG 22 CG 135 1 Y 1 B ARG 245 ? CD ? B ARG 22 CD 136 1 Y 1 B ARG 245 ? NE ? B ARG 22 NE 137 1 Y 1 B ARG 245 ? CZ ? B ARG 22 CZ 138 1 Y 1 B ARG 245 ? NH1 ? B ARG 22 NH1 139 1 Y 1 B ARG 245 ? NH2 ? B ARG 22 NH2 140 1 Y 1 B LYS 249 ? CG ? B LYS 26 CG 141 1 Y 1 B LYS 249 ? CD ? B LYS 26 CD 142 1 Y 1 B LYS 249 ? CE ? B LYS 26 CE 143 1 Y 1 B LYS 249 ? NZ ? B LYS 26 NZ 144 1 Y 1 B GLU 250 ? CD ? B GLU 27 CD 145 1 Y 1 B GLU 250 ? OE1 ? B GLU 27 OE1 146 1 Y 1 B GLU 250 ? OE2 ? B GLU 27 OE2 147 1 Y 1 B ILE 253 ? CD1 ? B ILE 30 CD1 148 1 Y 1 B ARG 254 ? NE ? B ARG 31 NE 149 1 Y 1 B ARG 254 ? CZ ? B ARG 31 CZ 150 1 Y 1 B ARG 254 ? NH1 ? B ARG 31 NH1 151 1 Y 1 B ARG 254 ? NH2 ? B ARG 31 NH2 152 1 Y 1 B LYS 256 ? CD ? B LYS 33 CD 153 1 Y 1 B LYS 256 ? CE ? B LYS 33 CE 154 1 Y 1 B LYS 256 ? NZ ? B LYS 33 NZ 155 1 Y 1 B GLN 269 ? CG ? B GLN 46 CG 156 1 Y 1 B GLN 269 ? CD ? B GLN 46 CD 157 1 Y 1 B GLN 269 ? OE1 ? B GLN 46 OE1 158 1 Y 1 B GLN 269 ? NE2 ? B GLN 46 NE2 159 1 Y 1 B GLN 277 ? CD ? B GLN 54 CD 160 1 Y 1 B GLN 277 ? OE1 ? B GLN 54 OE1 161 1 Y 1 B GLN 277 ? NE2 ? B GLN 54 NE2 162 1 Y 1 B GLU 283 ? CG ? B GLU 60 CG 163 1 Y 1 B GLU 283 ? CD ? B GLU 60 CD 164 1 Y 1 B GLU 283 ? OE1 ? B GLU 60 OE1 165 1 Y 1 B GLU 283 ? OE2 ? B GLU 60 OE2 166 1 Y 1 B GLN 288 ? CG ? B GLN 65 CG 167 1 Y 1 B GLN 288 ? CD ? B GLN 65 CD 168 1 Y 1 B GLN 288 ? OE1 ? B GLN 65 OE1 169 1 Y 1 B GLN 288 ? NE2 ? B GLN 65 NE2 170 1 Y 1 B GLU 294 ? CD ? B GLU 71 CD 171 1 Y 1 B GLU 294 ? OE1 ? B GLU 71 OE1 172 1 Y 1 B GLU 294 ? OE2 ? B GLU 71 OE2 173 1 Y 1 B GLN 295 ? CG ? B GLN 72 CG 174 1 Y 1 B GLN 295 ? CD ? B GLN 72 CD 175 1 Y 1 B GLN 295 ? OE1 ? B GLN 72 OE1 176 1 Y 1 B GLN 295 ? NE2 ? B GLN 72 NE2 177 1 Y 1 B LEU 298 ? CD1 ? B LEU 75 CD1 178 1 Y 1 B LEU 298 ? CD2 ? B LEU 75 CD2 179 1 Y 1 B GLU 299 ? CD ? B GLU 76 CD 180 1 Y 1 B GLU 299 ? OE1 ? B GLU 76 OE1 181 1 Y 1 B GLU 299 ? OE2 ? B GLU 76 OE2 182 1 Y 1 B ARG 302 ? CG ? B ARG 79 CG 183 1 Y 1 B ARG 302 ? CD ? B ARG 79 CD 184 1 Y 1 B ARG 302 ? NE ? B ARG 79 NE 185 1 Y 1 B ARG 302 ? CZ ? B ARG 79 CZ 186 1 Y 1 B ARG 302 ? NH1 ? B ARG 79 NH1 187 1 Y 1 B ARG 302 ? NH2 ? B ARG 79 NH2 188 1 Y 1 B LYS 305 ? CD ? B LYS 82 CD 189 1 Y 1 B LYS 305 ? CE ? B LYS 82 CE 190 1 Y 1 B LYS 305 ? NZ ? B LYS 82 NZ 191 1 Y 1 B GLU 306 ? CG ? B GLU 83 CG 192 1 Y 1 B GLU 306 ? CD ? B GLU 83 CD 193 1 Y 1 B GLU 306 ? OE1 ? B GLU 83 OE1 194 1 Y 1 B GLU 306 ? OE2 ? B GLU 83 OE2 195 1 Y 1 B LEU 309 ? CG ? B LEU 86 CG 196 1 Y 1 B LEU 309 ? CD1 ? B LEU 86 CD1 197 1 Y 1 B LEU 309 ? CD2 ? B LEU 86 CD2 198 1 Y 1 B LYS 313 ? CD ? B LYS 90 CD 199 1 Y 1 B LYS 313 ? CE ? B LYS 90 CE 200 1 Y 1 B LYS 313 ? NZ ? B LYS 90 NZ 201 1 Y 1 B LYS 316 ? CG ? B LYS 93 CG 202 1 Y 1 B LYS 316 ? CD ? B LYS 93 CD 203 1 Y 1 B LYS 316 ? CE ? B LYS 93 CE 204 1 Y 1 B LYS 316 ? NZ ? B LYS 93 NZ 205 1 Y 1 B LEU 317 ? CD1 ? B LEU 94 CD1 206 1 Y 1 B LEU 317 ? CD2 ? B LEU 94 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 224 ? A GLY 1 2 1 Y 1 A SER 225 ? A SER 2 3 1 Y 1 A ALA 318 ? A ALA 95 4 1 Y 1 B GLY 224 ? B GLY 1 5 1 Y 1 B SER 225 ? B SER 2 6 1 Y 1 B ARG 226 ? B ARG 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 SER N N N N 416 SER CA C N S 417 SER C C N N 418 SER O O N N 419 SER CB C N N 420 SER OG O N N 421 SER OXT O N N 422 SER H H N N 423 SER H2 H N N 424 SER HA H N N 425 SER HB2 H N N 426 SER HB3 H N N 427 SER HG H N N 428 SER HXT H N N 429 SO4 S S N N 430 SO4 O1 O N N 431 SO4 O2 O N N 432 SO4 O3 O N N 433 SO4 O4 O N N 434 THR N N N N 435 THR CA C N S 436 THR C C N N 437 THR O O N N 438 THR CB C N R 439 THR OG1 O N N 440 THR CG2 C N N 441 THR OXT O N N 442 THR H H N N 443 THR H2 H N N 444 THR HA H N N 445 THR HB H N N 446 THR HG1 H N N 447 THR HG21 H N N 448 THR HG22 H N N 449 THR HG23 H N N 450 THR HXT H N N 451 TYR N N N N 452 TYR CA C N S 453 TYR C C N N 454 TYR O O N N 455 TYR CB C N N 456 TYR CG C Y N 457 TYR CD1 C Y N 458 TYR CD2 C Y N 459 TYR CE1 C Y N 460 TYR CE2 C Y N 461 TYR CZ C Y N 462 TYR OH O N N 463 TYR OXT O N N 464 TYR H H N N 465 TYR H2 H N N 466 TYR HA H N N 467 TYR HB2 H N N 468 TYR HB3 H N N 469 TYR HD1 H N N 470 TYR HD2 H N N 471 TYR HE1 H N N 472 TYR HE2 H N N 473 TYR HH H N N 474 TYR HXT H N N 475 VAL N N N N 476 VAL CA C N S 477 VAL C C N N 478 VAL O O N N 479 VAL CB C N N 480 VAL CG1 C N N 481 VAL CG2 C N N 482 VAL OXT O N N 483 VAL H H N N 484 VAL H2 H N N 485 VAL HA H N N 486 VAL HB H N N 487 VAL HG11 H N N 488 VAL HG12 H N N 489 VAL HG13 H N N 490 VAL HG21 H N N 491 VAL HG22 H N N 492 VAL HG23 H N N 493 VAL HXT H N N 494 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 SER N CA sing N N 409 SER N H sing N N 410 SER N H2 sing N N 411 SER CA C sing N N 412 SER CA CB sing N N 413 SER CA HA sing N N 414 SER C O doub N N 415 SER C OXT sing N N 416 SER CB OG sing N N 417 SER CB HB2 sing N N 418 SER CB HB3 sing N N 419 SER OG HG sing N N 420 SER OXT HXT sing N N 421 SO4 S O1 doub N N 422 SO4 S O2 doub N N 423 SO4 S O3 sing N N 424 SO4 S O4 sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TYR N CA sing N N 442 TYR N H sing N N 443 TYR N H2 sing N N 444 TYR CA C sing N N 445 TYR CA CB sing N N 446 TYR CA HA sing N N 447 TYR C O doub N N 448 TYR C OXT sing N N 449 TYR CB CG sing N N 450 TYR CB HB2 sing N N 451 TYR CB HB3 sing N N 452 TYR CG CD1 doub Y N 453 TYR CG CD2 sing Y N 454 TYR CD1 CE1 sing Y N 455 TYR CD1 HD1 sing N N 456 TYR CD2 CE2 doub Y N 457 TYR CD2 HD2 sing N N 458 TYR CE1 CZ doub Y N 459 TYR CE1 HE1 sing N N 460 TYR CE2 CZ sing Y N 461 TYR CE2 HE2 sing N N 462 TYR CZ OH sing N N 463 TYR OH HH sing N N 464 TYR OXT HXT sing N N 465 VAL N CA sing N N 466 VAL N H sing N N 467 VAL N H2 sing N N 468 VAL CA C sing N N 469 VAL CA CB sing N N 470 VAL CA HA sing N N 471 VAL C O doub N N 472 VAL C OXT sing N N 473 VAL CB CG1 sing N N 474 VAL CB CG2 sing N N 475 VAL CB HB sing N N 476 VAL CG1 HG11 sing N N 477 VAL CG1 HG12 sing N N 478 VAL CG1 HG13 sing N N 479 VAL CG2 HG21 sing N N 480 VAL CG2 HG22 sing N N 481 VAL CG2 HG23 sing N N 482 VAL OXT HXT sing N N 483 # _ndb_struct_conf_na.entry_id 4EOT _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 2 1_555 D DG 19 1_555 0.481 -0.319 0.342 -3.044 -7.182 5.890 1 C_DC2:DG19_D C 2 ? D 19 ? 19 1 1 C DG 3 1_555 D DC 18 1_555 -2.158 -0.501 0.274 4.939 -8.721 9.832 2 C_DG3:DC18_D C 3 ? D 18 ? ? 1 1 C DG 4 1_555 D DC 17 1_555 0.296 -0.377 0.500 2.946 -12.687 -6.935 3 C_DG4:DC17_D C 4 ? D 17 ? 19 1 1 C DT 5 1_555 D DA 16 1_555 0.020 -0.345 0.365 -5.332 -7.746 8.099 4 C_DT5:DA16_D C 5 ? D 16 ? 20 1 1 C DG 6 1_555 D DC 15 1_555 -0.162 -0.219 0.083 2.045 -8.270 -0.813 5 C_DG6:DC15_D C 6 ? D 15 ? 19 1 1 C DC 7 1_555 D DG 14 1_555 0.149 -0.281 0.289 -1.213 -11.596 -1.389 6 C_DC7:DG14_D C 7 ? D 14 ? 19 1 1 C DT 8 1_555 D DA 13 1_555 0.023 -0.225 0.293 2.523 -10.672 1.208 7 C_DT8:DA13_D C 8 ? D 13 ? 20 1 1 C DG 9 1_555 D DC 12 1_555 -0.228 -0.350 -0.077 -3.624 -9.327 -3.067 8 C_DG9:DC12_D C 9 ? D 12 ? 19 1 1 C DA 10 1_555 D DT 11 1_555 -0.105 -0.061 0.101 0.431 -7.261 -0.630 9 C_DA10:DT11_D C 10 ? D 11 ? 20 1 1 C DG 11 1_555 D DC 10 1_555 0.359 -0.440 0.162 -0.398 -3.141 -3.853 10 C_DG11:DC10_D C 11 ? D 10 ? 19 1 1 C DT 12 1_555 D DA 9 1_555 -0.566 -0.187 0.018 1.907 -12.400 2.871 11 C_DT12:DA9_D C 12 ? D 9 ? 20 1 1 C DC 13 1_555 D DG 8 1_555 -0.160 -0.150 -0.114 4.742 -9.434 1.390 12 C_DC13:DG8_D C 13 ? D 8 ? 19 1 1 C DA 14 1_555 D DT 7 1_555 0.186 -0.361 0.049 -0.548 -8.262 -3.275 13 C_DA14:DT7_D C 14 ? D 7 ? 20 1 1 C DG 15 1_555 D DC 6 1_555 -0.103 -0.320 0.153 6.807 -7.114 -0.136 14 C_DG15:DC6_D C 15 ? D 6 ? 19 1 1 C DC 16 1_555 D DG 5 1_555 0.301 -0.197 0.179 2.190 -8.260 1.024 15 C_DC16:DG5_D C 16 ? D 5 ? 19 1 1 C DA 17 1_555 D DT 4 1_555 0.260 -0.462 0.497 8.551 -11.959 4.440 16 C_DA17:DT4_D C 17 ? D 4 ? 20 1 1 C DG 18 1_555 D DC 3 1_555 0.285 -0.437 0.025 -1.019 -10.567 -1.732 17 C_DG18:DC3_D C 18 ? D 3 ? 19 1 1 C DG 19 1_555 D DC 2 1_555 -0.167 -0.472 0.267 -1.409 -9.916 -0.927 18 C_DG19:DC2_D C 19 ? D 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 2 1_555 D DG 19 1_555 C DG 3 1_555 D DC 18 1_555 0.574 -0.171 2.975 -4.256 7.730 22.430 -2.607 -2.586 2.619 18.956 10.437 24.083 1 CC_DC2DG3:DC18DG19_DD C 2 ? D 19 ? C 3 ? D 18 ? 1 C DG 3 1_555 D DC 18 1_555 C DG 4 1_555 D DC 17 1_555 -1.152 0.465 3.424 -5.888 -1.101 50.331 0.626 0.904 3.519 -1.290 6.895 50.663 2 CC_DG3DG4:DC17DC18_DD C 3 ? D 18 ? C 4 ? D 17 ? 1 C DG 4 1_555 D DC 17 1_555 C DT 5 1_555 D DA 16 1_555 0.008 -1.081 3.495 2.303 -2.115 26.759 -1.736 0.621 3.556 -4.550 -4.954 26.938 3 CC_DG4DT5:DA16DC17_DD C 4 ? D 17 ? C 5 ? D 16 ? 1 C DT 5 1_555 D DA 16 1_555 C DG 6 1_555 D DC 15 1_555 -0.367 0.268 3.067 2.526 6.849 33.682 -0.552 0.990 3.027 11.650 -4.296 34.442 4 CC_DT5DG6:DC15DA16_DD C 5 ? D 16 ? C 6 ? D 15 ? 1 C DG 6 1_555 D DC 15 1_555 C DC 7 1_555 D DG 14 1_555 0.581 -0.379 3.284 1.458 2.574 34.672 -1.028 -0.748 3.270 4.309 -2.440 34.794 5 CC_DG6DC7:DG14DC15_DD C 6 ? D 15 ? C 7 ? D 14 ? 1 C DC 7 1_555 D DG 14 1_555 C DT 8 1_555 D DA 13 1_555 -0.008 -0.078 3.227 3.151 10.082 26.288 -2.460 0.736 2.974 21.115 -6.598 28.296 6 CC_DC7DT8:DA13DG14_DD C 7 ? D 14 ? C 8 ? D 13 ? 1 C DT 8 1_555 D DA 13 1_555 C DG 9 1_555 D DC 12 1_555 -0.536 0.412 3.342 -0.141 5.443 42.625 0.006 0.718 3.369 7.452 0.192 42.955 7 CC_DT8DG9:DC12DA13_DD C 8 ? D 13 ? C 9 ? D 12 ? 1 C DG 9 1_555 D DC 12 1_555 C DA 10 1_555 D DT 11 1_555 0.198 -0.253 3.085 -3.578 7.650 30.380 -1.795 -0.987 2.895 14.254 6.668 31.505 8 CC_DG9DA10:DT11DC12_DD C 9 ? D 12 ? C 10 ? D 11 ? 1 C DA 10 1_555 D DT 11 1_555 C DG 11 1_555 D DC 10 1_555 -0.529 -0.633 3.215 -2.624 2.575 36.462 -1.353 0.489 3.194 4.102 4.181 36.641 9 CC_DA10DG11:DC10DT11_DD C 10 ? D 11 ? C 11 ? D 10 ? 1 C DG 11 1_555 D DC 10 1_555 C DT 12 1_555 D DA 9 1_555 0.401 -0.765 3.162 2.549 2.199 31.442 -1.796 -0.281 3.125 4.043 -4.687 31.617 10 CC_DG11DT12:DA9DC10_DD C 11 ? D 10 ? C 12 ? D 9 ? 1 C DT 12 1_555 D DA 9 1_555 C DC 13 1_555 D DG 8 1_555 -0.213 -0.077 3.211 1.555 8.386 32.381 -1.488 0.621 3.083 14.721 -2.730 33.456 11 CC_DT12DC13:DG8DA9_DD C 12 ? D 9 ? C 13 ? D 8 ? 1 C DC 13 1_555 D DG 8 1_555 C DA 14 1_555 D DT 7 1_555 0.147 0.600 3.411 1.396 5.347 42.536 0.259 -0.055 3.461 7.334 -1.915 42.877 12 CC_DC13DA14:DT7DG8_DD C 13 ? D 8 ? C 14 ? D 7 ? 1 C DA 14 1_555 D DT 7 1_555 C DG 15 1_555 D DC 6 1_555 0.554 -0.012 3.108 -1.785 8.983 26.262 -2.068 -1.560 2.901 19.049 3.785 27.787 13 CC_DA14DG15:DC6DT7_DD C 14 ? D 7 ? C 15 ? D 6 ? 1 C DG 15 1_555 D DC 6 1_555 C DC 16 1_555 D DG 5 1_555 -0.487 -0.336 3.317 -2.197 2.647 35.895 -0.924 0.471 3.307 4.284 3.555 36.054 14 CC_DG15DC16:DG5DC6_DD C 15 ? D 6 ? C 16 ? D 5 ? 1 C DC 16 1_555 D DG 5 1_555 C DA 17 1_555 D DT 4 1_555 -0.058 0.136 3.065 -1.402 5.503 34.795 -0.544 -0.100 3.050 9.127 2.325 35.241 15 CC_DC16DA17:DT4DG5_DD C 16 ? D 5 ? C 17 ? D 4 ? 1 C DA 17 1_555 D DT 4 1_555 C DG 18 1_555 D DC 3 1_555 0.048 -0.579 3.512 1.448 3.506 32.750 -1.656 0.178 3.432 6.192 -2.558 32.963 16 CC_DA17DG18:DC3DT4_DD C 17 ? D 4 ? C 18 ? D 3 ? 1 C DG 18 1_555 D DC 3 1_555 C DG 19 1_555 D DC 2 1_555 -0.530 -0.719 3.226 -3.785 2.160 39.798 -1.295 0.346 3.220 3.161 5.540 40.027 17 CC_DG18DG19:DC2DC3_DD C 18 ? D 3 ? C 19 ? D 2 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3A5T _pdbx_initial_refinement_model.details 'PDB ENTRY 3A5T' #