HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-APR-12 4EPS TITLE CRYSTAL STRUCTURE OF A FIMBRIAL PROTEIN (BACOVA_04982) FROM TITLE 2 BACTEROIDES OVATUS ATCC 8483 AT 1.85 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS; SOURCE 3 ORGANISM_TAXID: 411476; SOURCE 4 STRAIN: ATCC 8483; SOURCE 5 GENE: BACOVA_04982; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS HYPOTHETICAL PROTEIN (DUF3988), STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 4EPS 1 REMARK SEQADV REVDAT 5 22-APR-20 4EPS 1 JRNL LINK REVDAT 4 24-JAN-18 4EPS 1 JRNL REVDAT 3 15-NOV-17 4EPS 1 REMARK REVDAT 2 24-DEC-14 4EPS 1 TITLE REVDAT 1 13-JUN-12 4EPS 0 JRNL AUTH Q.XU,M.SHOJI,S.SHIBATA,M.NAITO,K.SATO,M.A.ELSLIGER, JRNL AUTH 2 J.C.GRANT,H.L.AXELROD,H.J.CHIU,C.L.FARR,L.JAROSZEWSKI, JRNL AUTH 3 M.W.KNUTH,A.M.DEACON,A.GODZIK,S.A.LESLEY,M.A.CURTIS, JRNL AUTH 4 K.NAKAYAMA,I.A.WILSON JRNL TITL A DISTINCT TYPE OF PILUS FROM THE HUMAN MICROBIOME. JRNL REF CELL V. 165 690 2016 JRNL REFN ISSN 1097-4172 JRNL PMID 27062925 JRNL DOI 10.1016/J.CELL.2016.03.016 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 66923 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3390 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.90 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4846 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2020 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4593 REMARK 3 BIN R VALUE (WORKING SET) : 0.2022 REMARK 3 BIN FREE R VALUE : 0.1988 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.22 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 253 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3898 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 151 REMARK 3 SOLVENT ATOMS : 656 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.31490 REMARK 3 B22 (A**2) : 2.31490 REMARK 3 B33 (A**2) : -4.62980 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.197 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4328 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5895 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2001 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 119 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 639 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4328 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 564 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5368 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.80 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.61 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|32 - 534 } REMARK 3 ORIGIN FOR THE GROUP (A): 46.4263 34.1448 92.1478 REMARK 3 T TENSOR REMARK 3 T11: 0.0030 T22: -0.0606 REMARK 3 T33: -0.0332 T12: -0.0163 REMARK 3 T13: -0.0137 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 0.4324 L22: 0.5564 REMARK 3 L33: 0.3019 L12: -0.4019 REMARK 3 L13: -0.3179 L23: 0.3750 REMARK 3 S TENSOR REMARK 3 S11: -0.0361 S12: -0.0899 S13: 0.0049 REMARK 3 S21: 0.1398 S22: 0.0204 S23: 0.0192 REMARK 3 S31: 0.0544 S32: -0.0082 S33: 0.0158 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. SULFATE, CHLORIDE, GLYCEROL MODELED WERE PRESENT REMARK 3 IN THE CRYSTALLIZATION/CRYO CONDITIONS. REMARK 4 REMARK 4 4EPS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071920. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : RHODIUM-COATED VERTICAL AND REMARK 200 HORIZONTAL FOCUSING MIRRORS; REMARK 200 LIQUID-NITROGEN COOLED DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67064 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 29.056 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11400 REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.99300 REMARK 200 R SYM FOR SHELL (I) : 0.99300 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULFATE, 0.1M MES PH REMARK 280 6.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 125.24900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.97800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.97800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.62450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.97800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.97800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 187.87350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.97800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.97800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.62450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.97800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.97800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 187.87350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 125.24900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -164.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 77.95600 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 77.95600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 125.24900 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLU A 26 REMARK 465 GLU A 27 REMARK 465 GLU A 28 REMARK 465 VAL A 29 REMARK 465 PRO A 30 REMARK 465 GLY A 31 REMARK 465 PRO A 51 REMARK 465 SER A 52 REMARK 465 THR A 53 REMARK 465 ARG A 54 REMARK 465 THR A 55 REMARK 465 GLU A 56 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 34 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 ARG A 106 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 64 159.67 78.92 REMARK 500 SER A 94 -40.32 -130.24 REMARK 500 ASP A 223 -43.67 63.55 REMARK 500 ASP A 223 -49.84 69.29 REMARK 500 ASN A 259 -115.25 55.07 REMARK 500 ASN A 259 46.43 36.17 REMARK 500 MSE A 271 77.69 -100.21 REMARK 500 ASN A 500 -167.48 -161.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 616 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 617 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 618 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 619 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 620 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 621 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 622 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 623 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 624 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 625 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 626 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 627 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 628 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 629 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417033 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 26-534) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4EPS A 26 534 UNP A7M4E1 A7M4E1_BACOV 26 534 SEQADV 4EPS GLY A 0 UNP A7M4E1 EXPRESSION TAG SEQRES 1 A 510 GLY GLU GLU GLU VAL PRO GLY ASN VAL ARG ASN GLY ILE SEQRES 2 A 510 VAL LEU ASN VAL THR ASP THR GLY ILE ILE SER ASN GLU SEQRES 3 A 510 PRO SER THR ARG THR GLU ASP THR GLY PHE VAL THR THR SEQRES 4 A 510 PHE THR GLN GLY ASP GLN ILE GLY LEU PHE ALA VAL LYS SEQRES 5 A 510 ASP GLY ALA ILE LEU ASP GLU ILE ASN ASN MSE PRO PHE SEQRES 6 A 510 THR PHE ASN GLY SER SER TRP SER GLY LYS PRO ILE LEU SEQRES 7 A 510 TYR ASP ASP ARG LEU VAL GLY VAL ASN PHE TYR ALA TYR SEQRES 8 A 510 TYR PRO TYR GLN SER GLU MSE THR GLY LYS THR ASP LEU SEQRES 9 A 510 ILE GLY ASP ASP PHE PHE ALA PRO LEU ALA ALA GLY TRP SEQRES 10 A 510 GLU LEU THR THR GLU GLN SER ASP GLN LYS ALA TYR ALA SEQRES 11 A 510 LYS GLN ASP LEU MSE THR SER ASN ALA THR ALA LEU ILE SEQRES 12 A 510 GLY GLU ASN GLY ASN TYR SER LEU SER PHE GLN LEU THR SEQRES 13 A 510 HIS ARG MSE SER LEU VAL VAL VAL LYS LEU PRO SER THR SEQRES 14 A 510 ARG TYR ILE PHE THR ASP ALA GLU GLY VAL ALA MSE PRO SEQRES 15 A 510 GLU GLU THR PRO TYR VAL ALA MSE SER VAL ASP VAL ALA SEQRES 16 A 510 PHE TYR LEU ASP ASN VAL GLU GLU GLY THR LYS ILE SER SEQRES 17 A 510 PRO TYR TYR ASP ALA LYS LYS ASP GLU TYR ARG LEU LEU SEQRES 18 A 510 ARG LYS PRO SER SER GLU ASN GLN ILE ILE GLY HIS TYR SEQRES 19 A 510 ASN ASP LYS GLN CYS THR LEU ASP THR ALA GLU LYS MSE SEQRES 20 A 510 LYS GLU GLY LYS TYR LYS ARG PHE VAL VAL ASP GLY GLY SEQRES 21 A 510 TYR LYS GLU VAL THR HIS HIS LEU GLN VAL GLY ASP TYR SEQRES 22 A 510 TYR TYR ALA ASP GLY SER VAL VAL SER GLY ASN GLU ALA SEQRES 23 A 510 GLU PRO ALA LYS ASP ASN CYS ILE GLY ILE VAL CYS TRP SEQRES 24 A 510 VAL GLY ASN PRO MSE PRO SER VAL LEU TYR LYS ASP VAL SEQRES 25 A 510 ALA GLY THR PRO TYR THR ALA THR ASN ASP ALA LEU LEU SEQRES 26 A 510 ARG SER HIS PRO ASN CYS VAL HIS GLY LEU VAL MSE SER SEQRES 27 A 510 LEU TYR THR GLU THR GLY LYS PHE SER PRO ALA LEU THR SEQRES 28 A 510 GLN SER ILE HIS ASP TRP PHE MSE THR THR SER PHE THR SEQRES 29 A 510 SER SER TYR VAL SER VAL THR GLY TYR TYR ASP ALA ASN SEQRES 30 A 510 GLU ASN ASN LYS ASN LYS PRO LEU ARG PHE LEU GLY TYR SEQRES 31 A 510 ASN ASN SER GLU VAL LEU ASP LEU TYR TYR ASP THR PHE SEQRES 32 A 510 LYS THR ASP PHE GLU CYS PHE GLN TYR GLN ASP ASP CYS SEQRES 33 A 510 GLU SER SER PHE PRO SER PRO SER ILE THR THR GLY TRP SEQRES 34 A 510 TYR VAL PRO SER SER GLY GLU LEU VAL ALA LEU GLN ASP SEQRES 35 A 510 LYS ASP ASN SER LEU GLU SER LYS LEU ASN THR LYS LEU SEQRES 36 A 510 ILE LYS VAL SER ASP LYS THR MSE ASP ILE SER ALA THR SEQRES 37 A 510 TYR TRP SER SER THR GLU ARG ASN ASN LYS ASN MSE TYR SEQRES 38 A 510 ILE VAL THR TYR SER LYS THR ALA GLY SER ALA GLY THR SEQRES 39 A 510 GLY GLY VAL LYS THR ASN THR TYR THR TYR ARG PHE PHE SEQRES 40 A 510 LEU GLY PHE MODRES 4EPS MSE A 87 MET SELENOMETHIONINE MODRES 4EPS MSE A 122 MET SELENOMETHIONINE MODRES 4EPS MSE A 159 MET SELENOMETHIONINE MODRES 4EPS MSE A 183 MET SELENOMETHIONINE MODRES 4EPS MSE A 205 MET SELENOMETHIONINE MODRES 4EPS MSE A 214 MET SELENOMETHIONINE MODRES 4EPS MSE A 271 MET SELENOMETHIONINE MODRES 4EPS MSE A 328 MET SELENOMETHIONINE MODRES 4EPS MSE A 361 MET SELENOMETHIONINE MODRES 4EPS MSE A 383 MET SELENOMETHIONINE MODRES 4EPS MSE A 487 MET SELENOMETHIONINE MODRES 4EPS MSE A 504 MET SELENOMETHIONINE HET MSE A 87 8 HET MSE A 122 8 HET MSE A 159 13 HET MSE A 183 8 HET MSE A 205 8 HET MSE A 214 8 HET MSE A 271 8 HET MSE A 328 13 HET MSE A 361 8 HET MSE A 383 8 HET MSE A 487 8 HET MSE A 504 8 HET CL A 601 1 HET CL A 602 1 HET CL A 603 1 HET CL A 604 1 HET SO4 A 605 5 HET SO4 A 606 5 HET SO4 A 607 5 HET GOL A 608 6 HET GOL A 609 6 HET GOL A 610 6 HET GOL A 611 6 HET GOL A 612 6 HET GOL A 613 6 HET GOL A 614 6 HET GOL A 615 6 HET GOL A 616 6 HET GOL A 617 6 HET GOL A 618 6 HET GOL A 619 6 HET GOL A 620 6 HET GOL A 621 6 HET GOL A 622 6 HET GOL A 623 6 HET GOL A 624 6 HET GOL A 625 6 HET GOL A 626 6 HET GOL A 627 6 HET GOL A 628 6 HET GOL A 629 6 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 2 CL 4(CL 1-) FORMUL 6 SO4 3(O4 S 2-) FORMUL 9 GOL 22(C3 H8 O3) FORMUL 31 HOH *656(H2 O) HELIX 1 1 ASP A 104 VAL A 108 5 5 HELIX 2 2 PHE A 134 GLY A 140 1 7 HELIX 3 3 ASP A 149 LYS A 155 1 7 HELIX 4 4 GLU A 226 GLY A 228 5 3 HELIX 5 5 MSE A 328 TYR A 333 1 6 HELIX 6 6 THR A 342 ASN A 345 5 4 HELIX 7 7 ASP A 346 HIS A 352 1 7 HELIX 8 8 SER A 377 THR A 384 1 8 HELIX 9 9 ASN A 406 ARG A 410 5 5 HELIX 10 10 LEU A 412 LYS A 428 1 17 HELIX 11 11 PHE A 431 PHE A 444 1 14 HELIX 12 12 SER A 457 ALA A 463 1 7 HELIX 13 13 ASN A 469 LEU A 475 1 7 HELIX 14 14 LEU A 475 SER A 483 1 9 SHEET 1 A 7 VAL A 38 ASP A 43 0 SHEET 2 A 7 ASN A 172 HIS A 181 1 O LEU A 179 N THR A 42 SHEET 3 A 7 MSE A 159 THR A 160 -1 N THR A 160 O THR A 180 SHEET 4 A 7 ASN A 111 TYR A 116 -1 N TYR A 116 O MSE A 159 SHEET 5 A 7 GLN A 69 LYS A 76 -1 N VAL A 75 O ASN A 111 SHEET 6 A 7 MSE A 87 PHE A 91 -1 O MSE A 87 N LEU A 72 SHEET 7 A 7 TRP A 96 SER A 97 -1 O SER A 97 N THR A 90 SHEET 1 B 6 ALA A 79 ILE A 80 0 SHEET 2 B 6 GLN A 69 LYS A 76 -1 N LYS A 76 O ALA A 79 SHEET 3 B 6 ASN A 111 TYR A 116 -1 O ASN A 111 N VAL A 75 SHEET 4 B 6 MSE A 159 THR A 160 -1 O MSE A 159 N TYR A 116 SHEET 5 B 6 ASN A 172 HIS A 181 -1 O THR A 180 N THR A 160 SHEET 6 B 6 ILE A 167 GLU A 169 -1 N ILE A 167 O SER A 174 SHEET 1 C 5 ILE A 47 SER A 48 0 SHEET 2 C 5 LYS A 275 VAL A 280 1 O TYR A 276 N ILE A 47 SHEET 3 C 5 SER A 184 LYS A 189 1 N VAL A 187 O PHE A 279 SHEET 4 C 5 GLU A 241 ARG A 246 -1 O ARG A 246 N SER A 184 SHEET 5 C 5 TYR A 234 ASP A 236 -1 N ASP A 236 O GLU A 241 SHEET 1 D 3 TYR A 211 MSE A 214 0 SHEET 2 D 3 SER A 192 THR A 198 -1 N THR A 193 O ALA A 213 SHEET 3 D 3 TYR A 285 HIS A 291 1 O LYS A 286 N ARG A 194 SHEET 1 E 4 LYS A 230 ILE A 231 0 SHEET 2 E 4 ALA A 219 LEU A 222 -1 N PHE A 220 O ILE A 231 SHEET 3 E 4 GLN A 253 TYR A 258 -1 O HIS A 257 N ALA A 219 SHEET 4 E 4 LYS A 261 ASP A 266 -1 O LEU A 265 N ILE A 254 SHEET 1 F 5 VAL A 304 VAL A 305 0 SHEET 2 F 5 TYR A 297 TYR A 299 -1 N TYR A 297 O VAL A 305 SHEET 3 F 5 CYS A 317 VAL A 324 -1 O GLY A 319 N TYR A 298 SHEET 4 F 5 GLY A 358 SER A 362 -1 O MSE A 361 N ILE A 320 SHEET 5 F 5 PHE A 531 PHE A 534 -1 O LEU A 532 N VAL A 360 SHEET 1 G 2 GLU A 366 GLY A 368 0 SHEET 2 G 2 TYR A 526 TYR A 528 -1 O TYR A 528 N GLU A 366 SHEET 1 H 3 TYR A 493 GLU A 498 0 SHEET 2 H 3 ASN A 503 TYR A 509 -1 O TYR A 505 N THR A 497 SHEET 3 H 3 GLY A 514 VAL A 521 -1 O GLY A 517 N ILE A 506 LINK C ASN A 86 N MSE A 87 1555 1555 1.33 LINK C MSE A 87 N PRO A 88 1555 1555 1.35 LINK C GLU A 121 N MSE A 122 1555 1555 1.34 LINK C MSE A 122 N THR A 123 1555 1555 1.35 LINK C LEU A 158 N MSE A 159 1555 1555 1.35 LINK C MSE A 159 N THR A 160 1555 1555 1.34 LINK C ARG A 182 N MSE A 183 1555 1555 1.34 LINK C MSE A 183 N SER A 184 1555 1555 1.34 LINK C ALA A 204 N MSE A 205 1555 1555 1.33 LINK C MSE A 205 N PRO A 206 1555 1555 1.35 LINK C ALA A 213 N MSE A 214 1555 1555 1.32 LINK C MSE A 214 N SER A 215 1555 1555 1.33 LINK C LYS A 270 N MSE A 271 1555 1555 1.34 LINK C MSE A 271 N LYS A 272 1555 1555 1.34 LINK C PRO A 327 N MSE A 328 1555 1555 1.35 LINK C MSE A 328 N PRO A 329 1555 1555 1.36 LINK C VAL A 360 N MSE A 361 1555 1555 1.33 LINK C MSE A 361 N SER A 362 1555 1555 1.32 LINK C PHE A 382 N MSE A 383 1555 1555 1.34 LINK C MSE A 383 N THR A 384 1555 1555 1.35 LINK C THR A 486 N MSE A 487 1555 1555 1.32 LINK C MSE A 487 N ASP A 488 1555 1555 1.35 LINK C ASN A 503 N MSE A 504 1555 1555 1.34 LINK C MSE A 504 N TYR A 505 1555 1555 1.33 CISPEP 1 TYR A 116 PRO A 117 0 -10.14 SITE 1 AC1 2 GOL A 608 GOL A 609 SITE 1 AC2 2 ALA A 516 HOH A1177 SITE 1 AC3 3 TYR A 285 HOH A1155 HOH A1233 SITE 1 AC4 1 LYS A 511 SITE 1 AC5 9 ASP A 199 ALA A 200 HIS A 291 SER A 306 SITE 2 AC5 9 ASN A 308 HOH A 729 HOH A 801 HOH A 807 SITE 3 AC5 9 HOH A 916 SITE 1 AC6 6 ARG A 499 THR A 518 GOL A 615 HOH A 950 SITE 2 AC6 6 HOH A 966 HOH A1049 SITE 1 AC7 3 ARG A 410 HOH A1130 HOH A1240 SITE 1 AC8 8 GLN A 150 TYR A 153 TYR A 234 ARG A 243 SITE 2 AC8 8 CL A 601 GOL A 609 HOH A1068 HOH A1353 SITE 1 AC9 11 THR A 62 PHE A 64 ASP A 68 TYR A 116 SITE 2 AC9 11 TYR A 153 ASP A 157 MSE A 159 CL A 601 SITE 3 AC9 11 GOL A 608 HOH A1068 HOH A1334 SITE 1 BC1 6 GLN A 119 TRP A 141 GLU A 142 LYS A 155 SITE 2 BC1 6 HOH A 987 HOH A1306 SITE 1 BC2 8 SER A 417 LEU A 420 PHE A 434 GLN A 437 SITE 2 BC2 8 TYR A 454 VAL A 455 SER A 496 HOH A 703 SITE 1 BC3 5 LYS A 314 LYS A 481 SER A 483 ASP A 484 SITE 2 BC3 5 HOH A 939 SITE 1 BC4 6 PRO A 312 ALA A 313 LYS A 314 ASP A 315 SITE 2 BC4 6 HOH A1081 HOH A1271 SITE 1 BC5 8 PRO A 191 SER A 192 THR A 193 ALA A 213 SITE 2 BC5 8 ASN A 259 ASP A 301 HOH A 962 HOH A1118 SITE 1 BC6 9 ARG A 499 ASN A 500 ASN A 503 THR A 518 SITE 2 BC6 9 SO4 A 606 HOH A 797 HOH A 852 HOH A 959 SITE 3 BC6 9 HOH A1079 SITE 1 BC7 4 ASP A 82 GLU A 83 ILE A 84 ASN A 85 SITE 1 BC8 5 ASP A 149 GLN A 150 TYR A 234 HOH A 918 SITE 2 BC8 5 HOH A 956 SITE 1 BC9 4 ASP A 421 TYR A 424 PHE A 434 HOH A1327 SITE 1 CC1 6 TRP A 323 TYR A 333 LEU A 409 PHE A 411 SITE 2 CC1 6 HOH A 714 HOH A 783 SITE 1 CC2 5 LYS A 189 LYS A 239 TYR A 285 HOH A 762 SITE 2 CC2 5 HOH A1233 SITE 1 CC3 5 ASN A 524 THR A 525 HOH A 744 HOH A1046 SITE 2 CC3 5 HOH A1279 SITE 1 CC4 5 VAL A 75 ASP A 77 GLY A 78 GLY A 109 SITE 2 CC4 5 ASN A 111 SITE 1 CC5 2 ARG A 194 HOH A1016 SITE 1 CC6 4 TYR A 118 SER A 120 HOH A1034 HOH A1166 SITE 1 CC7 8 TYR A 414 SER A 417 GLU A 418 ASP A 421 SITE 2 CC7 8 THR A 451 GLY A 452 TRP A 453 HOH A1095 SITE 1 CC8 7 ILE A 37 PHE A 89 SER A 97 GLY A 98 SITE 2 CC8 7 PRO A 100 ILE A 101 HOH A 849 SITE 1 CC9 4 THR A 486 HOH A 724 HOH A1032 HOH A1297 SITE 1 DC1 6 ASN A 316 CYS A 317 SER A 443 PHE A 444 SITE 2 DC1 6 HOH A 736 HOH A 979 SITE 1 DC2 6 ASN A 85 ASN A 86 SER A 120 GLU A 121 SITE 2 DC2 6 MSE A 122 THR A 123 CRYST1 77.956 77.956 250.498 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012828 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012828 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003992 0.00000