HEADER IMMUNE SYSTEM 18-APR-12 4EQ3 TITLE CRYSTAL STRUCTURE ANALYSIS OF SELENOMETHIONINE (SE-MET) SUBSTITUTED TITLE 2 CHICKEN INTERFERON GAMMA RECEPTOR ALPHA CHAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERFERON GAMMA RECEPTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 25-237; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: BANTAM,CHICKENS; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS INTERFERON GAMMA, BETA CHAIN, IG-LIKE STRUCTURE, LIGAND-BINDING, KEYWDS 2 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Z.PING,J.QI,G.LU,Y.SHI,X.WANG,G.F.GAO,M.WANG REVDAT 3 21-MAY-14 4EQ3 1 JRNL REVDAT 2 25-DEC-13 4EQ3 1 JRNL REVDAT 1 24-APR-13 4EQ3 0 JRNL AUTH Z.PING,J.QI,Y.SUN,G.LU,Y.SHI,X.WANG,G.F.GAO,M.WANG JRNL TITL CRYSTAL STRUCTURE OF THE INTERFERON GAMMA RECEPTOR ALPHA JRNL TITL 2 CHAIN FROM CHICKEN REVEALS AN UNDETECTED EXTRA HELIX JRNL TITL 3 COMPARED WITH THE HUMAN COUNTERPARTS. JRNL REF J.INTERFERON CYTOKINE RES. V. 34 41 2014 JRNL REFN ISSN 1079-9907 JRNL PMID 24283193 JRNL DOI 10.1089/JIR.2012.0160 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.220 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 16638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5464 - 3.6355 0.95 2983 168 0.2118 0.2275 REMARK 3 2 3.6355 - 2.8859 0.97 2847 146 0.2228 0.2884 REMARK 3 3 2.8859 - 2.5212 0.96 2761 154 0.2574 0.2909 REMARK 3 4 2.5212 - 2.2907 0.94 2672 144 0.2559 0.2380 REMARK 3 5 2.2907 - 2.1266 0.88 2467 131 0.2609 0.2836 REMARK 3 6 2.1266 - 2.0012 0.90 2548 132 0.2421 0.2741 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 41.16 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.48520 REMARK 3 B22 (A**2) : 4.48520 REMARK 3 B33 (A**2) : -8.97050 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 1692 REMARK 3 ANGLE : 1.288 2299 REMARK 3 CHIRALITY : 0.098 251 REMARK 3 PLANARITY : 0.006 295 REMARK 3 DIHEDRAL : 21.332 603 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain A and (resseq 2:101) REMARK 3 ORIGIN FOR THE GROUP (A): -34.4519 22.1199 7.0915 REMARK 3 T TENSOR REMARK 3 T11: 0.2330 T22: 0.1985 REMARK 3 T33: 0.2039 T12: 0.0791 REMARK 3 T13: -0.0664 T23: -0.0422 REMARK 3 L TENSOR REMARK 3 L11: 0.7216 L22: 1.0024 REMARK 3 L33: 1.5410 L12: -0.1725 REMARK 3 L13: 0.1516 L23: -0.2499 REMARK 3 S TENSOR REMARK 3 S11: -0.0081 S12: -0.0036 S13: 0.0932 REMARK 3 S21: -0.1390 S22: -0.0864 S23: 0.0758 REMARK 3 S31: -0.2180 S32: -0.1245 S33: 0.0885 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain A and (resseq 102:207) REMARK 3 ORIGIN FOR THE GROUP (A): -23.5404 -7.4120 20.7416 REMARK 3 T TENSOR REMARK 3 T11: 0.2225 T22: 0.1844 REMARK 3 T33: 0.1985 T12: -0.0123 REMARK 3 T13: 0.0027 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 0.8087 L22: 1.3465 REMARK 3 L33: 1.5076 L12: 0.1063 REMARK 3 L13: 0.9323 L23: -0.6869 REMARK 3 S TENSOR REMARK 3 S11: 0.0508 S12: -0.0563 S13: -0.0933 REMARK 3 S21: -0.0213 S22: -0.1275 S23: -0.1599 REMARK 3 S31: 0.1452 S32: -0.1007 S33: 0.0633 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EQ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAY-12. REMARK 100 THE RCSB ID CODE IS RCSB071931. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97923, 0.9789, 0.9791, 0.9000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17153 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 32.600 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 59.3280 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 35.80 REMARK 200 R MERGE FOR SHELL (I) : 0.30200 REMARK 200 R SYM FOR SHELL (I) : 0.30200 REMARK 200 FOR SHELL : 18.095 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (V/V) POLYETHYLENE GLYCOL 5000 REMARK 280 MONOMETHYL ETHER, 0.1M HEPES, 0.5M SODIUM CARBONATE , PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 143.83333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.91667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 107.87500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.95833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 179.79167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 143.83333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 71.91667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 35.95833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 107.87500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 179.79167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -7 REMARK 465 GLY A -6 REMARK 465 ARG A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLU A -2 REMARK 465 ARG A -1 REMARK 465 LEU A 0 REMARK 465 PRO A 1 REMARK 465 THR A 208 REMARK 465 GLN A 209 REMARK 465 ALA A 210 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 148 CB ASN A 151 1.62 REMARK 500 O HOH A 374 O HOH A 519 1.84 REMARK 500 OD1 ASN A 53 O HOH A 417 1.85 REMARK 500 O HOH A 451 O HOH A 507 1.86 REMARK 500 O HOH A 442 O HOH A 448 1.86 REMARK 500 O HOH A 437 O HOH A 467 1.88 REMARK 500 O HOH A 433 O HOH A 494 1.89 REMARK 500 OD1 ASN A 148 O HOH A 498 1.93 REMARK 500 O HOH A 378 O HOH A 413 1.94 REMARK 500 O HOH A 445 O HOH A 501 1.94 REMARK 500 OG SER A 175 O HOH A 438 1.97 REMARK 500 OG SER A 175 O HOH A 500 1.97 REMARK 500 OE1 GLU A 139 O HOH A 487 2.00 REMARK 500 O GLU A 176 O PRO A 206 2.00 REMARK 500 OE1 GLU A 128 O HOH A 416 2.01 REMARK 500 O HOH A 380 O HOH A 515 2.02 REMARK 500 NH1 ARG A 154 O HOH A 405 2.03 REMARK 500 O HOH A 502 O HOH A 511 2.04 REMARK 500 O HOH A 383 O HOH A 514 2.04 REMARK 500 O HOH A 450 O HOH A 477 2.10 REMARK 500 N SER A 175 O HOH A 458 2.12 REMARK 500 O VAL A 173 O HOH A 512 2.13 REMARK 500 OE1 GLU A 200 O HOH A 496 2.13 REMARK 500 O HOH A 463 O HOH A 508 2.16 REMARK 500 N VAL A 173 O HOH A 512 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 154 CB - CA - C ANGL. DEV. = -34.6 DEGREES REMARK 500 LYS A 155 N - CA - CB ANGL. DEV. = -24.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 29 -155.27 -102.62 REMARK 500 THR A 57 37.19 -99.71 REMARK 500 GLU A 150 42.57 -71.22 REMARK 500 ASN A 151 -51.44 -159.42 REMARK 500 ARG A 154 93.57 -167.98 REMARK 500 PRO A 174 -82.18 -32.60 REMARK 500 SER A 175 130.98 172.03 REMARK 500 GLU A 176 18.17 159.62 REMARK 500 SER A 178 -152.20 -140.32 REMARK 500 ASP A 190 -91.54 59.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 176 GLY A 177 145.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN A 151 23.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FG9 RELATED DB: PDB REMARK 900 RELATED ID: 1J7V RELATED DB: PDB REMARK 900 RELATED ID: 3DLQ RELATED DB: PDB REMARK 900 RELATED ID: 4EQ2 RELATED DB: PDB DBREF 4EQ3 A -2 210 UNP B4XN22 B4XN22_CHICK 25 237 SEQADV 4EQ3 MSE A -7 UNP B4XN22 EXPRESSION TAG SEQADV 4EQ3 GLY A -6 UNP B4XN22 EXPRESSION TAG SEQADV 4EQ3 ARG A -5 UNP B4XN22 EXPRESSION TAG SEQADV 4EQ3 GLY A -4 UNP B4XN22 EXPRESSION TAG SEQADV 4EQ3 SER A -3 UNP B4XN22 EXPRESSION TAG SEQRES 1 A 218 MSE GLY ARG GLY SER GLU ARG LEU PRO ALA VAL PRO SER SEQRES 2 A 218 PRO THR GLY THR SER VAL LYS SER LYS ASN PHE ARG THR SEQRES 3 A 218 VAL LEU TYR TRP GLN TYR PRO SER MSE SER GLU THR PRO SEQRES 4 A 218 HIS PHE VAL VAL GLU VAL LYS PRO TYR LEU SER GLY LYS SEQRES 5 A 218 TYR GLN THR VAL SER THR CYS VAL ASN ILE SER ALA THR SEQRES 6 A 218 SER CYS ASP LEU SER GLU GLU ILE ASN GLU ILE PHE HIS SEQRES 7 A 218 SER TYR TRP PHE ARG ILE LYS ALA ILE VAL GLY SER GLN SEQRES 8 A 218 GLN SER GLN TYR VAL GLU THR ASP GLU PHE VAL LEU GLN SEQRES 9 A 218 LYS HIS GLY LYS ILE GLY PRO PRO LYS LEU ASN LEU SER SEQRES 10 A 218 ARG HIS GLY ALA GLU ILE ILE VAL ASP VAL TYR HIS PRO SEQRES 11 A 218 GLU PHE PRO SER VAL GLU VAL ARG PRO TRP MSE ARG GLU SEQRES 12 A 218 ILE TYR SER GLU LEU SER TYR SER VAL ILE PHE ARG ASN SEQRES 13 A 218 SER GLU ASN GLU SER ARG LYS ASN PHE THR VAL ALA ASP SEQRES 14 A 218 CYS GLU MSE ASN GLU CYS ASN LEU SER ILE PRO VAL PRO SEQRES 15 A 218 SER GLU GLY SER THR TYR CYS VAL SER ALA LYS GLY HIS SEQRES 16 A 218 PHE PHE ASP ASP LEU ILE VAL GLY ALA SER SER GLU GLU SEQRES 17 A 218 SER CYS ILE TRP VAL PRO ILE THR GLN ALA MODRES 4EQ3 MSE A 27 MET SELENOMETHIONINE MODRES 4EQ3 MSE A 133 MET SELENOMETHIONINE MODRES 4EQ3 MSE A 164 MET SELENOMETHIONINE HET MSE A 27 8 HET MSE A 133 8 HET MSE A 164 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 HOH *221(H2 O) HELIX 1 1 VAL A 94 GLY A 99 1 6 HELIX 2 2 ARG A 130 TRP A 132 5 3 HELIX 3 3 MSE A 133 SER A 138 1 6 HELIX 4 4 CYS A 162 GLU A 166 5 5 SHEET 1 A 3 THR A 7 LYS A 14 0 SHEET 2 A 3 ARG A 17 GLN A 23 -1 O GLN A 23 N THR A 7 SHEET 3 A 3 SER A 58 ASP A 60 -1 O CYS A 59 N LEU A 20 SHEET 1 B 4 GLN A 46 ILE A 54 0 SHEET 2 B 4 HIS A 32 LYS A 38 -1 N VAL A 37 O GLN A 46 SHEET 3 B 4 TRP A 73 VAL A 80 -1 O ILE A 79 N HIS A 32 SHEET 4 B 4 GLN A 83 GLN A 84 -1 O GLN A 83 N VAL A 80 SHEET 1 C 4 GLN A 46 ILE A 54 0 SHEET 2 C 4 HIS A 32 LYS A 38 -1 N VAL A 37 O GLN A 46 SHEET 3 C 4 TRP A 73 VAL A 80 -1 O ILE A 79 N HIS A 32 SHEET 4 C 4 VAL A 88 GLU A 89 -1 O VAL A 88 N ILE A 76 SHEET 1 D 3 LYS A 105 HIS A 111 0 SHEET 2 D 3 GLU A 114 TYR A 120 -1 O TYR A 120 N LYS A 105 SHEET 3 D 3 CYS A 167 PRO A 172 -1 O LEU A 169 N VAL A 117 SHEET 1 E 4 SER A 153 ALA A 160 0 SHEET 2 E 4 LEU A 140 ASN A 148 -1 N PHE A 146 O LYS A 155 SHEET 3 E 4 SER A 178 PHE A 188 -1 O CYS A 181 N ARG A 147 SHEET 4 E 4 ILE A 193 VAL A 194 -1 O ILE A 193 N PHE A 188 SHEET 1 F 4 SER A 153 ALA A 160 0 SHEET 2 F 4 LEU A 140 ASN A 148 -1 N PHE A 146 O LYS A 155 SHEET 3 F 4 SER A 178 PHE A 188 -1 O CYS A 181 N ARG A 147 SHEET 4 F 4 SER A 201 VAL A 205 -1 O SER A 201 N VAL A 182 SSBOND 1 CYS A 51 CYS A 59 1555 1555 2.05 SSBOND 2 CYS A 162 CYS A 167 1555 1555 2.03 SSBOND 3 CYS A 181 CYS A 202 1555 1555 2.04 LINK C SER A 26 N MSE A 27 1555 1555 1.33 LINK C MSE A 27 N SER A 28 1555 1555 1.33 LINK C TRP A 132 N MSE A 133 1555 1555 1.33 LINK C MSE A 133 N ARG A 134 1555 1555 1.33 LINK C GLU A 163 N MSE A 164 1555 1555 1.32 LINK C MSE A 164 N ASN A 165 1555 1555 1.32 CISPEP 1 ASN A 151 GLU A 152 0 6.25 CISPEP 2 SER A 175 GLU A 176 0 -14.50 CRYST1 63.608 63.608 215.750 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015721 0.009077 0.000000 0.00000 SCALE2 0.000000 0.018153 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004635 0.00000