data_4ERR # _entry.id 4ERR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4ERR pdb_00004err 10.2210/pdb4err/pdb RCSB RCSB071987 ? ? WWPDB D_1000071987 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP91511 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4ERR _pdbx_database_status.recvd_initial_deposition_date 2012-04-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Minasov, G.' 1 'Wawrzak, Z.' 2 'Geissler, B.' 3 'Shuvalova, L.' 4 'Dubrovska, I.' 5 'Winsor, J.' 6 'Satchell, K.J.' 7 'Anderson, W.F.' 8 'Center for Structural Genomics of Infectious Diseases (CSGID)' 9 # _citation.id primary _citation.title ;1.55 Angstrom Crystal Structure of the Four Helical Bundle Membrane Localization Domain (4HBM) of the Vibrio vulnificus MARTX Effector Domain DUF5. ; _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Minasov, G.' 1 ? primary 'Wawrzak, Z.' 2 ? primary 'Geissler, B.' 3 ? primary 'Shuvalova, L.' 4 ? primary 'Dubrovska, I.' 5 ? primary 'Winsor, J.' 6 ? primary 'Satchell, K.J.' 7 ? primary 'Anderson, W.F.' 8 ? primary 'Center for Structural Genomics of Infectious Diseases (CSGID)' 9 ? # _cell.entry_id 4ERR _cell.length_a 44.896 _cell.length_b 49.874 _cell.length_c 72.102 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4ERR _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Autotransporter adhesin' 10151.451 2 ? ? 'Effector Domain DUF5 (UNP residues 3591-3669)' ? 2 non-polymer syn 'BROMIDE ION' 79.904 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 water nat water 18.015 239 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGQIFTVQELKERAKVFAKPIGASYQGILDQLDLVHQAKGRDQIAASFELNKKINDYIAEHPTSGRNQALTQLKEQVTSA LGLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MGQIFTVQELKERAKVFAKPIGASYQGILDQLDLVHQAKGRDQIAASFELNKKINDYIAEHPTSGRNQALTQLKEQVTSA LGLEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier CSGID-IDP91511 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 GLN n 1 4 ILE n 1 5 PHE n 1 6 THR n 1 7 VAL n 1 8 GLN n 1 9 GLU n 1 10 LEU n 1 11 LYS n 1 12 GLU n 1 13 ARG n 1 14 ALA n 1 15 LYS n 1 16 VAL n 1 17 PHE n 1 18 ALA n 1 19 LYS n 1 20 PRO n 1 21 ILE n 1 22 GLY n 1 23 ALA n 1 24 SER n 1 25 TYR n 1 26 GLN n 1 27 GLY n 1 28 ILE n 1 29 LEU n 1 30 ASP n 1 31 GLN n 1 32 LEU n 1 33 ASP n 1 34 LEU n 1 35 VAL n 1 36 HIS n 1 37 GLN n 1 38 ALA n 1 39 LYS n 1 40 GLY n 1 41 ARG n 1 42 ASP n 1 43 GLN n 1 44 ILE n 1 45 ALA n 1 46 ALA n 1 47 SER n 1 48 PHE n 1 49 GLU n 1 50 LEU n 1 51 ASN n 1 52 LYS n 1 53 LYS n 1 54 ILE n 1 55 ASN n 1 56 ASP n 1 57 TYR n 1 58 ILE n 1 59 ALA n 1 60 GLU n 1 61 HIS n 1 62 PRO n 1 63 THR n 1 64 SER n 1 65 GLY n 1 66 ARG n 1 67 ASN n 1 68 GLN n 1 69 ALA n 1 70 LEU n 1 71 THR n 1 72 GLN n 1 73 LEU n 1 74 LYS n 1 75 GLU n 1 76 GLN n 1 77 VAL n 1 78 THR n 1 79 SER n 1 80 ALA n 1 81 LEU n 1 82 GLY n 1 83 LEU n 1 84 GLU n 1 85 HIS n 1 86 HIS n 1 87 HIS n 1 88 HIS n 1 89 HIS n 1 90 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene VV2_0479 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CMCP6 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio vulnificus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 672 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pYCpet _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8D6P9_VIBVU _struct_ref.pdbx_db_accession Q8D6P9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code QIFTVQELKERAKVFAKPIGASYQGILDQLDLVHQAKGRDQIAASFELNKKINDYIAEHPTSGRNQALTQLKEQVTSAL _struct_ref.pdbx_align_begin 3591 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4ERR A 3 ? 81 ? Q8D6P9 3591 ? 3669 ? 3591 3669 2 1 4ERR B 3 ? 81 ? Q8D6P9 3591 ? 3669 ? 3591 3669 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4ERR MET A 1 ? UNP Q8D6P9 ? ? 'expression tag' 3589 1 1 4ERR GLY A 2 ? UNP Q8D6P9 ? ? 'expression tag' 3590 2 1 4ERR GLY A 82 ? UNP Q8D6P9 ? ? 'expression tag' 3670 3 1 4ERR LEU A 83 ? UNP Q8D6P9 ? ? 'expression tag' 3671 4 1 4ERR GLU A 84 ? UNP Q8D6P9 ? ? 'expression tag' 3672 5 1 4ERR HIS A 85 ? UNP Q8D6P9 ? ? 'expression tag' 3673 6 1 4ERR HIS A 86 ? UNP Q8D6P9 ? ? 'expression tag' 3674 7 1 4ERR HIS A 87 ? UNP Q8D6P9 ? ? 'expression tag' 3675 8 1 4ERR HIS A 88 ? UNP Q8D6P9 ? ? 'expression tag' 3676 9 1 4ERR HIS A 89 ? UNP Q8D6P9 ? ? 'expression tag' 3677 10 1 4ERR HIS A 90 ? UNP Q8D6P9 ? ? 'expression tag' 3678 11 2 4ERR MET B 1 ? UNP Q8D6P9 ? ? 'expression tag' 3589 12 2 4ERR GLY B 2 ? UNP Q8D6P9 ? ? 'expression tag' 3590 13 2 4ERR GLY B 82 ? UNP Q8D6P9 ? ? 'expression tag' 3670 14 2 4ERR LEU B 83 ? UNP Q8D6P9 ? ? 'expression tag' 3671 15 2 4ERR GLU B 84 ? UNP Q8D6P9 ? ? 'expression tag' 3672 16 2 4ERR HIS B 85 ? UNP Q8D6P9 ? ? 'expression tag' 3673 17 2 4ERR HIS B 86 ? UNP Q8D6P9 ? ? 'expression tag' 3674 18 2 4ERR HIS B 87 ? UNP Q8D6P9 ? ? 'expression tag' 3675 19 2 4ERR HIS B 88 ? UNP Q8D6P9 ? ? 'expression tag' 3676 20 2 4ERR HIS B 89 ? UNP Q8D6P9 ? ? 'expression tag' 3677 21 2 4ERR HIS B 90 ? UNP Q8D6P9 ? ? 'expression tag' 3678 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BR non-polymer . 'BROMIDE ION' ? 'Br -1' 79.904 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4ERR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 38.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;Protein: 13mG/mL, 0.1M Sodium chloride, TRIS-HCl pH 7.0, 6.9 mM Phosphatidylserine (PS); Screen: JCSG+ (G10), 0.15M Potassium bromide, 30% w/v PEG MME 2000, VAPOR DIFFUSION, SITTING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2012-02-20 _diffrn_detector.details 'Beryllium lenses' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Diamond _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97856 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97856 # _reflns.entry_id 4ERR _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 1.55 _reflns.number_obs 24039 _reflns.number_all 24039 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 26.7 _reflns.B_iso_Wilson_estimate 28.7 _reflns.pdbx_redundancy 6.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.555 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 5.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1175 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4ERR _refine.ls_number_reflns_obs 22766 _refine.ls_number_reflns_all 22766 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.22 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 99.38 _refine.ls_R_factor_obs 0.16983 _refine.ls_R_factor_all 0.16983 _refine.ls_R_factor_R_work 0.16717 _refine.ls_R_factor_R_free 0.21520 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1223 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.953 _refine.B_iso_mean 23.373 _refine.aniso_B[1][1] -0.50 _refine.aniso_B[2][2] 1.19 _refine.aniso_B[3][3] -0.69 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 2EBF _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'Thermal Factors Anisotropically Refined' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.134 _refine.pdbx_overall_ESU_R_Free 0.095 _refine.overall_SU_ML 0.059 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.576 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1285 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 239 _refine_hist.number_atoms_total 1528 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 29.22 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.012 0.022 ? 1538 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 1065 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.187 1.968 ? 2098 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.852 3.000 ? 2651 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 3.671 5.000 ? 211 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 38.114 26.438 ? 73 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.260 15.000 ? 310 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 10.595 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.075 0.200 ? 227 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.006 0.020 ? 1823 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.002 0.020 ? 283 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.970 1.500 ? 963 ? 'X-RAY DIFFRACTION' r_mcbond_other 0.828 1.500 ? 386 ? 'X-RAY DIFFRACTION' r_mcangle_it 3.268 2.000 ? 1573 ? 'X-RAY DIFFRACTION' r_scbond_it 4.420 3.000 ? 575 ? 'X-RAY DIFFRACTION' r_scangle_it 6.532 4.500 ? 525 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 1.063 1.000 ? 2603 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.550 _refine_ls_shell.d_res_low 1.590 _refine_ls_shell.number_reflns_R_work 1607 _refine_ls_shell.R_factor_R_work 0.297 _refine_ls_shell.percent_reflns_obs 96.00 _refine_ls_shell.R_factor_R_free 0.395 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1607 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4ERR _struct.title ;1.55 Angstrom Crystal Structure of the Four Helical Bundle Membrane Localization Domain (4HBM) of the Vibrio vulnificus MARTX Effector Domain DUF5 ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4ERR _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Center for Structural Genomics of Infectious Diseases, CSGID, four helical bundle membrane localization domain, PROTEIN BINDING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 6 ? ALA A 38 ? THR A 3594 ALA A 3626 1 ? 33 HELX_P HELX_P2 2 LYS A 39 ? HIS A 61 ? LYS A 3627 HIS A 3649 1 ? 23 HELX_P HELX_P3 3 SER A 64 ? GLY A 82 ? SER A 3652 GLY A 3670 1 ? 19 HELX_P HELX_P4 4 THR B 6 ? ALA B 38 ? THR B 3594 ALA B 3626 1 ? 33 HELX_P HELX_P5 5 GLY B 40 ? HIS B 61 ? GLY B 3628 HIS B 3649 1 ? 22 HELX_P HELX_P6 6 SER B 64 ? GLY B 82 ? SER B 3652 GLY B 3670 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BR 3701 ? 5 'BINDING SITE FOR RESIDUE BR A 3701' AC2 Software A CL 3702 ? 4 'BINDING SITE FOR RESIDUE CL A 3702' AC3 Software B BR 3701 ? 4 'BINDING SITE FOR RESIDUE BR B 3701' AC4 Software B CL 3702 ? 4 'BINDING SITE FOR RESIDUE CL B 3702' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 64 ? SER A 3652 . ? 1_555 ? 2 AC1 5 TYR B 57 ? TYR B 3645 . ? 1_555 ? 3 AC1 5 SER B 64 ? SER B 3652 . ? 1_555 ? 4 AC1 5 CL F . ? CL B 3702 . ? 1_555 ? 5 AC1 5 HOH H . ? HOH B 3809 . ? 1_555 ? 6 AC2 4 GLY A 65 ? GLY A 3653 . ? 1_555 ? 7 AC2 4 HOH G . ? HOH A 3808 . ? 1_555 ? 8 AC2 4 BR E . ? BR B 3701 . ? 1_555 ? 9 AC2 4 HOH H . ? HOH B 3805 . ? 1_555 ? 10 AC3 4 TYR A 57 ? TYR A 3645 . ? 1_555 ? 11 AC3 4 CL D . ? CL A 3702 . ? 1_555 ? 12 AC3 4 SER B 64 ? SER B 3652 . ? 1_555 ? 13 AC3 4 ASN B 67 ? ASN B 3655 . ? 1_555 ? 14 AC4 4 BR C . ? BR A 3701 . ? 1_555 ? 15 AC4 4 GLY B 65 ? GLY B 3653 . ? 1_555 ? 16 AC4 4 HOH H . ? HOH B 3803 . ? 1_555 ? 17 AC4 4 HOH H . ? HOH B 3822 . ? 1_555 ? # _database_PDB_matrix.entry_id 4ERR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4ERR _atom_sites.fract_transf_matrix[1][1] 0.022274 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020051 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013869 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C CL N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 3589 ? ? ? A . n A 1 2 GLY 2 3590 3590 GLY GLY A . n A 1 3 GLN 3 3591 3591 GLN GLN A . n A 1 4 ILE 4 3592 3592 ILE ILE A . n A 1 5 PHE 5 3593 3593 PHE PHE A . n A 1 6 THR 6 3594 3594 THR THR A . n A 1 7 VAL 7 3595 3595 VAL VAL A . n A 1 8 GLN 8 3596 3596 GLN GLN A . n A 1 9 GLU 9 3597 3597 GLU GLU A . n A 1 10 LEU 10 3598 3598 LEU LEU A . n A 1 11 LYS 11 3599 3599 LYS LYS A . n A 1 12 GLU 12 3600 3600 GLU GLU A . n A 1 13 ARG 13 3601 3601 ARG ARG A . n A 1 14 ALA 14 3602 3602 ALA ALA A . n A 1 15 LYS 15 3603 3603 LYS LYS A . n A 1 16 VAL 16 3604 3604 VAL VAL A . n A 1 17 PHE 17 3605 3605 PHE PHE A . n A 1 18 ALA 18 3606 3606 ALA ALA A . n A 1 19 LYS 19 3607 3607 LYS LYS A . n A 1 20 PRO 20 3608 3608 PRO PRO A . n A 1 21 ILE 21 3609 3609 ILE ILE A . n A 1 22 GLY 22 3610 3610 GLY GLY A . n A 1 23 ALA 23 3611 3611 ALA ALA A . n A 1 24 SER 24 3612 3612 SER SER A . n A 1 25 TYR 25 3613 3613 TYR TYR A . n A 1 26 GLN 26 3614 3614 GLN GLN A . n A 1 27 GLY 27 3615 3615 GLY GLY A . n A 1 28 ILE 28 3616 3616 ILE ILE A . n A 1 29 LEU 29 3617 3617 LEU LEU A . n A 1 30 ASP 30 3618 3618 ASP ASP A . n A 1 31 GLN 31 3619 3619 GLN GLN A . n A 1 32 LEU 32 3620 3620 LEU LEU A . n A 1 33 ASP 33 3621 3621 ASP ASP A . n A 1 34 LEU 34 3622 3622 LEU LEU A . n A 1 35 VAL 35 3623 3623 VAL VAL A . n A 1 36 HIS 36 3624 3624 HIS HIS A . n A 1 37 GLN 37 3625 3625 GLN GLN A . n A 1 38 ALA 38 3626 3626 ALA ALA A . n A 1 39 LYS 39 3627 3627 LYS LYS A . n A 1 40 GLY 40 3628 3628 GLY GLY A . n A 1 41 ARG 41 3629 3629 ARG ARG A . n A 1 42 ASP 42 3630 3630 ASP ASP A . n A 1 43 GLN 43 3631 3631 GLN GLN A . n A 1 44 ILE 44 3632 3632 ILE ILE A . n A 1 45 ALA 45 3633 3633 ALA ALA A . n A 1 46 ALA 46 3634 3634 ALA ALA A . n A 1 47 SER 47 3635 3635 SER SER A . n A 1 48 PHE 48 3636 3636 PHE PHE A . n A 1 49 GLU 49 3637 3637 GLU GLU A . n A 1 50 LEU 50 3638 3638 LEU LEU A . n A 1 51 ASN 51 3639 3639 ASN ASN A . n A 1 52 LYS 52 3640 3640 LYS LYS A . n A 1 53 LYS 53 3641 3641 LYS LYS A . n A 1 54 ILE 54 3642 3642 ILE ILE A . n A 1 55 ASN 55 3643 3643 ASN ASN A . n A 1 56 ASP 56 3644 3644 ASP ASP A . n A 1 57 TYR 57 3645 3645 TYR TYR A . n A 1 58 ILE 58 3646 3646 ILE ILE A . n A 1 59 ALA 59 3647 3647 ALA ALA A . n A 1 60 GLU 60 3648 3648 GLU GLU A . n A 1 61 HIS 61 3649 3649 HIS HIS A . n A 1 62 PRO 62 3650 3650 PRO PRO A . n A 1 63 THR 63 3651 3651 THR THR A . n A 1 64 SER 64 3652 3652 SER SER A . n A 1 65 GLY 65 3653 3653 GLY GLY A . n A 1 66 ARG 66 3654 3654 ARG ARG A . n A 1 67 ASN 67 3655 3655 ASN ASN A . n A 1 68 GLN 68 3656 3656 GLN GLN A . n A 1 69 ALA 69 3657 3657 ALA ALA A . n A 1 70 LEU 70 3658 3658 LEU LEU A . n A 1 71 THR 71 3659 3659 THR THR A . n A 1 72 GLN 72 3660 3660 GLN GLN A . n A 1 73 LEU 73 3661 3661 LEU LEU A . n A 1 74 LYS 74 3662 3662 LYS LYS A . n A 1 75 GLU 75 3663 3663 GLU GLU A . n A 1 76 GLN 76 3664 3664 GLN GLN A . n A 1 77 VAL 77 3665 3665 VAL VAL A . n A 1 78 THR 78 3666 3666 THR THR A . n A 1 79 SER 79 3667 3667 SER SER A . n A 1 80 ALA 80 3668 3668 ALA ALA A . n A 1 81 LEU 81 3669 3669 LEU LEU A . n A 1 82 GLY 82 3670 3670 GLY GLY A . n A 1 83 LEU 83 3671 3671 LEU LEU A . n A 1 84 GLU 84 3672 ? ? ? A . n A 1 85 HIS 85 3673 ? ? ? A . n A 1 86 HIS 86 3674 ? ? ? A . n A 1 87 HIS 87 3675 ? ? ? A . n A 1 88 HIS 88 3676 ? ? ? A . n A 1 89 HIS 89 3677 ? ? ? A . n A 1 90 HIS 90 3678 ? ? ? A . n B 1 1 MET 1 3589 ? ? ? B . n B 1 2 GLY 2 3590 3590 GLY GLY B . n B 1 3 GLN 3 3591 3591 GLN GLN B . n B 1 4 ILE 4 3592 3592 ILE ILE B . n B 1 5 PHE 5 3593 3593 PHE PHE B . n B 1 6 THR 6 3594 3594 THR THR B . n B 1 7 VAL 7 3595 3595 VAL VAL B . n B 1 8 GLN 8 3596 3596 GLN GLN B . n B 1 9 GLU 9 3597 3597 GLU GLU B . n B 1 10 LEU 10 3598 3598 LEU LEU B . n B 1 11 LYS 11 3599 3599 LYS LYS B . n B 1 12 GLU 12 3600 3600 GLU GLU B . n B 1 13 ARG 13 3601 3601 ARG ARG B . n B 1 14 ALA 14 3602 3602 ALA ALA B . n B 1 15 LYS 15 3603 3603 LYS LYS B . n B 1 16 VAL 16 3604 3604 VAL VAL B . n B 1 17 PHE 17 3605 3605 PHE PHE B . n B 1 18 ALA 18 3606 3606 ALA ALA B . n B 1 19 LYS 19 3607 3607 LYS LYS B . n B 1 20 PRO 20 3608 3608 PRO PRO B . n B 1 21 ILE 21 3609 3609 ILE ILE B . n B 1 22 GLY 22 3610 3610 GLY GLY B . n B 1 23 ALA 23 3611 3611 ALA ALA B . n B 1 24 SER 24 3612 3612 SER SER B . n B 1 25 TYR 25 3613 3613 TYR TYR B . n B 1 26 GLN 26 3614 3614 GLN GLN B . n B 1 27 GLY 27 3615 3615 GLY GLY B . n B 1 28 ILE 28 3616 3616 ILE ILE B . n B 1 29 LEU 29 3617 3617 LEU LEU B . n B 1 30 ASP 30 3618 3618 ASP ASP B . n B 1 31 GLN 31 3619 3619 GLN GLN B . n B 1 32 LEU 32 3620 3620 LEU LEU B . n B 1 33 ASP 33 3621 3621 ASP ASP B . n B 1 34 LEU 34 3622 3622 LEU LEU B . n B 1 35 VAL 35 3623 3623 VAL VAL B . n B 1 36 HIS 36 3624 3624 HIS HIS B . n B 1 37 GLN 37 3625 3625 GLN GLN B . n B 1 38 ALA 38 3626 3626 ALA ALA B . n B 1 39 LYS 39 3627 3627 LYS LYS B . n B 1 40 GLY 40 3628 3628 GLY GLY B . n B 1 41 ARG 41 3629 3629 ARG ARG B . n B 1 42 ASP 42 3630 3630 ASP ASP B . n B 1 43 GLN 43 3631 3631 GLN GLN B . n B 1 44 ILE 44 3632 3632 ILE ILE B . n B 1 45 ALA 45 3633 3633 ALA ALA B . n B 1 46 ALA 46 3634 3634 ALA ALA B . n B 1 47 SER 47 3635 3635 SER SER B . n B 1 48 PHE 48 3636 3636 PHE PHE B . n B 1 49 GLU 49 3637 3637 GLU GLU B . n B 1 50 LEU 50 3638 3638 LEU LEU B . n B 1 51 ASN 51 3639 3639 ASN ASN B . n B 1 52 LYS 52 3640 3640 LYS LYS B . n B 1 53 LYS 53 3641 3641 LYS LYS B . n B 1 54 ILE 54 3642 3642 ILE ILE B . n B 1 55 ASN 55 3643 3643 ASN ASN B . n B 1 56 ASP 56 3644 3644 ASP ASP B . n B 1 57 TYR 57 3645 3645 TYR TYR B . n B 1 58 ILE 58 3646 3646 ILE ILE B . n B 1 59 ALA 59 3647 3647 ALA ALA B . n B 1 60 GLU 60 3648 3648 GLU GLU B . n B 1 61 HIS 61 3649 3649 HIS HIS B . n B 1 62 PRO 62 3650 3650 PRO PRO B . n B 1 63 THR 63 3651 3651 THR THR B . n B 1 64 SER 64 3652 3652 SER SER B . n B 1 65 GLY 65 3653 3653 GLY GLY B . n B 1 66 ARG 66 3654 3654 ARG ARG B . n B 1 67 ASN 67 3655 3655 ASN ASN B . n B 1 68 GLN 68 3656 3656 GLN GLN B . n B 1 69 ALA 69 3657 3657 ALA ALA B . n B 1 70 LEU 70 3658 3658 LEU LEU B . n B 1 71 THR 71 3659 3659 THR THR B . n B 1 72 GLN 72 3660 3660 GLN GLN B . n B 1 73 LEU 73 3661 3661 LEU LEU B . n B 1 74 LYS 74 3662 3662 LYS LYS B . n B 1 75 GLU 75 3663 3663 GLU GLU B . n B 1 76 GLN 76 3664 3664 GLN GLN B . n B 1 77 VAL 77 3665 3665 VAL VAL B . n B 1 78 THR 78 3666 3666 THR THR B . n B 1 79 SER 79 3667 3667 SER SER B . n B 1 80 ALA 80 3668 3668 ALA ALA B . n B 1 81 LEU 81 3669 3669 LEU LEU B . n B 1 82 GLY 82 3670 3670 GLY GLY B . n B 1 83 LEU 83 3671 3671 LEU LEU B . n B 1 84 GLU 84 3672 3672 GLU GLU B . n B 1 85 HIS 85 3673 ? ? ? B . n B 1 86 HIS 86 3674 ? ? ? B . n B 1 87 HIS 87 3675 ? ? ? B . n B 1 88 HIS 88 3676 ? ? ? B . n B 1 89 HIS 89 3677 ? ? ? B . n B 1 90 HIS 90 3678 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BR 1 3701 1 BR BR A . D 3 CL 1 3702 3 CL CL A . E 2 BR 1 3701 2 BR BR B . F 3 CL 1 3702 4 CL CL B . G 4 HOH 1 3801 5 HOH HOH A . G 4 HOH 2 3802 6 HOH HOH A . G 4 HOH 3 3803 7 HOH HOH A . G 4 HOH 4 3804 8 HOH HOH A . G 4 HOH 5 3805 9 HOH HOH A . G 4 HOH 6 3806 10 HOH HOH A . G 4 HOH 7 3807 11 HOH HOH A . G 4 HOH 8 3808 12 HOH HOH A . G 4 HOH 9 3809 17 HOH HOH A . G 4 HOH 10 3810 19 HOH HOH A . G 4 HOH 11 3811 20 HOH HOH A . G 4 HOH 12 3812 21 HOH HOH A . G 4 HOH 13 3813 22 HOH HOH A . G 4 HOH 14 3814 24 HOH HOH A . G 4 HOH 15 3815 26 HOH HOH A . G 4 HOH 16 3816 27 HOH HOH A . G 4 HOH 17 3817 28 HOH HOH A . G 4 HOH 18 3818 30 HOH HOH A . G 4 HOH 19 3819 32 HOH HOH A . G 4 HOH 20 3820 34 HOH HOH A . G 4 HOH 21 3821 36 HOH HOH A . G 4 HOH 22 3822 37 HOH HOH A . G 4 HOH 23 3823 39 HOH HOH A . G 4 HOH 24 3824 40 HOH HOH A . G 4 HOH 25 3825 41 HOH HOH A . G 4 HOH 26 3826 43 HOH HOH A . G 4 HOH 27 3827 47 HOH HOH A . G 4 HOH 28 3828 48 HOH HOH A . G 4 HOH 29 3829 49 HOH HOH A . G 4 HOH 30 3830 50 HOH HOH A . G 4 HOH 31 3831 52 HOH HOH A . G 4 HOH 32 3832 53 HOH HOH A . G 4 HOH 33 3833 55 HOH HOH A . G 4 HOH 34 3834 56 HOH HOH A . G 4 HOH 35 3835 59 HOH HOH A . G 4 HOH 36 3836 60 HOH HOH A . G 4 HOH 37 3837 61 HOH HOH A . G 4 HOH 38 3838 63 HOH HOH A . G 4 HOH 39 3839 65 HOH HOH A . G 4 HOH 40 3840 67 HOH HOH A . G 4 HOH 41 3841 68 HOH HOH A . G 4 HOH 42 3842 70 HOH HOH A . G 4 HOH 43 3843 71 HOH HOH A . G 4 HOH 44 3844 72 HOH HOH A . G 4 HOH 45 3845 73 HOH HOH A . G 4 HOH 46 3846 74 HOH HOH A . G 4 HOH 47 3847 75 HOH HOH A . G 4 HOH 48 3848 76 HOH HOH A . G 4 HOH 49 3849 80 HOH HOH A . G 4 HOH 50 3850 82 HOH HOH A . G 4 HOH 51 3851 84 HOH HOH A . G 4 HOH 52 3852 85 HOH HOH A . G 4 HOH 53 3853 86 HOH HOH A . G 4 HOH 54 3854 87 HOH HOH A . G 4 HOH 55 3855 88 HOH HOH A . G 4 HOH 56 3856 89 HOH HOH A . G 4 HOH 57 3857 91 HOH HOH A . G 4 HOH 58 3858 92 HOH HOH A . G 4 HOH 59 3859 93 HOH HOH A . G 4 HOH 60 3860 94 HOH HOH A . G 4 HOH 61 3861 100 HOH HOH A . G 4 HOH 62 3862 101 HOH HOH A . G 4 HOH 63 3863 103 HOH HOH A . G 4 HOH 64 3864 108 HOH HOH A . G 4 HOH 65 3865 116 HOH HOH A . G 4 HOH 66 3866 117 HOH HOH A . G 4 HOH 67 3867 121 HOH HOH A . G 4 HOH 68 3868 122 HOH HOH A . G 4 HOH 69 3869 127 HOH HOH A . G 4 HOH 70 3870 128 HOH HOH A . G 4 HOH 71 3871 130 HOH HOH A . G 4 HOH 72 3872 138 HOH HOH A . G 4 HOH 73 3873 140 HOH HOH A . G 4 HOH 74 3874 141 HOH HOH A . G 4 HOH 75 3875 142 HOH HOH A . G 4 HOH 76 3876 143 HOH HOH A . G 4 HOH 77 3877 144 HOH HOH A . G 4 HOH 78 3878 145 HOH HOH A . G 4 HOH 79 3879 149 HOH HOH A . G 4 HOH 80 3880 150 HOH HOH A . G 4 HOH 81 3881 151 HOH HOH A . G 4 HOH 82 3882 154 HOH HOH A . G 4 HOH 83 3883 155 HOH HOH A . G 4 HOH 84 3884 157 HOH HOH A . G 4 HOH 85 3885 158 HOH HOH A . G 4 HOH 86 3886 159 HOH HOH A . G 4 HOH 87 3887 160 HOH HOH A . G 4 HOH 88 3888 165 HOH HOH A . G 4 HOH 89 3889 168 HOH HOH A . G 4 HOH 90 3890 171 HOH HOH A . G 4 HOH 91 3891 173 HOH HOH A . G 4 HOH 92 3892 175 HOH HOH A . G 4 HOH 93 3893 176 HOH HOH A . G 4 HOH 94 3894 180 HOH HOH A . G 4 HOH 95 3895 181 HOH HOH A . G 4 HOH 96 3896 182 HOH HOH A . G 4 HOH 97 3897 183 HOH HOH A . G 4 HOH 98 3898 184 HOH HOH A . G 4 HOH 99 3899 185 HOH HOH A . G 4 HOH 100 3900 192 HOH HOH A . G 4 HOH 101 3901 195 HOH HOH A . G 4 HOH 102 3902 197 HOH HOH A . G 4 HOH 103 3903 198 HOH HOH A . G 4 HOH 104 3904 200 HOH HOH A . G 4 HOH 105 3905 201 HOH HOH A . G 4 HOH 106 3906 202 HOH HOH A . G 4 HOH 107 3907 203 HOH HOH A . G 4 HOH 108 3908 205 HOH HOH A . G 4 HOH 109 3909 206 HOH HOH A . G 4 HOH 110 3910 207 HOH HOH A . G 4 HOH 111 3911 208 HOH HOH A . G 4 HOH 112 3912 209 HOH HOH A . G 4 HOH 113 3913 210 HOH HOH A . G 4 HOH 114 3914 211 HOH HOH A . G 4 HOH 115 3915 212 HOH HOH A . G 4 HOH 116 3916 221 HOH HOH A . G 4 HOH 117 3917 224 HOH HOH A . G 4 HOH 118 3918 226 HOH HOH A . G 4 HOH 119 3919 228 HOH HOH A . G 4 HOH 120 3920 234 HOH HOH A . G 4 HOH 121 3921 235 HOH HOH A . G 4 HOH 122 3922 236 HOH HOH A . G 4 HOH 123 3923 244 HOH HOH A . H 4 HOH 1 3801 13 HOH HOH B . H 4 HOH 2 3802 14 HOH HOH B . H 4 HOH 3 3803 15 HOH HOH B . H 4 HOH 4 3804 16 HOH HOH B . H 4 HOH 5 3805 18 HOH HOH B . H 4 HOH 6 3806 23 HOH HOH B . H 4 HOH 7 3807 25 HOH HOH B . H 4 HOH 8 3808 29 HOH HOH B . H 4 HOH 9 3809 31 HOH HOH B . H 4 HOH 10 3810 33 HOH HOH B . H 4 HOH 11 3811 35 HOH HOH B . H 4 HOH 12 3812 38 HOH HOH B . H 4 HOH 13 3813 42 HOH HOH B . H 4 HOH 14 3814 44 HOH HOH B . H 4 HOH 15 3815 45 HOH HOH B . H 4 HOH 16 3816 46 HOH HOH B . H 4 HOH 17 3817 51 HOH HOH B . H 4 HOH 18 3818 54 HOH HOH B . H 4 HOH 19 3819 57 HOH HOH B . H 4 HOH 20 3820 58 HOH HOH B . H 4 HOH 21 3821 62 HOH HOH B . H 4 HOH 22 3822 64 HOH HOH B . H 4 HOH 23 3823 66 HOH HOH B . H 4 HOH 24 3824 69 HOH HOH B . H 4 HOH 25 3825 77 HOH HOH B . H 4 HOH 26 3826 78 HOH HOH B . H 4 HOH 27 3827 79 HOH HOH B . H 4 HOH 28 3828 81 HOH HOH B . H 4 HOH 29 3829 83 HOH HOH B . H 4 HOH 30 3830 90 HOH HOH B . H 4 HOH 31 3831 95 HOH HOH B . H 4 HOH 32 3832 96 HOH HOH B . H 4 HOH 33 3833 97 HOH HOH B . H 4 HOH 34 3834 98 HOH HOH B . H 4 HOH 35 3835 99 HOH HOH B . H 4 HOH 36 3836 102 HOH HOH B . H 4 HOH 37 3837 104 HOH HOH B . H 4 HOH 38 3838 105 HOH HOH B . H 4 HOH 39 3839 106 HOH HOH B . H 4 HOH 40 3840 107 HOH HOH B . H 4 HOH 41 3841 109 HOH HOH B . H 4 HOH 42 3842 110 HOH HOH B . H 4 HOH 43 3843 111 HOH HOH B . H 4 HOH 44 3844 112 HOH HOH B . H 4 HOH 45 3845 113 HOH HOH B . H 4 HOH 46 3846 114 HOH HOH B . H 4 HOH 47 3847 115 HOH HOH B . H 4 HOH 48 3848 118 HOH HOH B . H 4 HOH 49 3849 119 HOH HOH B . H 4 HOH 50 3850 120 HOH HOH B . H 4 HOH 51 3851 123 HOH HOH B . H 4 HOH 52 3852 124 HOH HOH B . H 4 HOH 53 3853 125 HOH HOH B . H 4 HOH 54 3854 126 HOH HOH B . H 4 HOH 55 3855 129 HOH HOH B . H 4 HOH 56 3856 131 HOH HOH B . H 4 HOH 57 3857 132 HOH HOH B . H 4 HOH 58 3858 133 HOH HOH B . H 4 HOH 59 3859 134 HOH HOH B . H 4 HOH 60 3860 135 HOH HOH B . H 4 HOH 61 3861 136 HOH HOH B . H 4 HOH 62 3862 137 HOH HOH B . H 4 HOH 63 3863 139 HOH HOH B . H 4 HOH 64 3864 146 HOH HOH B . H 4 HOH 65 3865 147 HOH HOH B . H 4 HOH 66 3866 148 HOH HOH B . H 4 HOH 67 3867 152 HOH HOH B . H 4 HOH 68 3868 153 HOH HOH B . H 4 HOH 69 3869 156 HOH HOH B . H 4 HOH 70 3870 161 HOH HOH B . H 4 HOH 71 3871 162 HOH HOH B . H 4 HOH 72 3872 163 HOH HOH B . H 4 HOH 73 3873 164 HOH HOH B . H 4 HOH 74 3874 166 HOH HOH B . H 4 HOH 75 3875 167 HOH HOH B . H 4 HOH 76 3876 169 HOH HOH B . H 4 HOH 77 3877 170 HOH HOH B . H 4 HOH 78 3878 172 HOH HOH B . H 4 HOH 79 3879 174 HOH HOH B . H 4 HOH 80 3880 177 HOH HOH B . H 4 HOH 81 3881 178 HOH HOH B . H 4 HOH 82 3882 179 HOH HOH B . H 4 HOH 83 3883 186 HOH HOH B . H 4 HOH 84 3884 187 HOH HOH B . H 4 HOH 85 3885 188 HOH HOH B . H 4 HOH 86 3886 189 HOH HOH B . H 4 HOH 87 3887 190 HOH HOH B . H 4 HOH 88 3888 191 HOH HOH B . H 4 HOH 89 3889 193 HOH HOH B . H 4 HOH 90 3890 194 HOH HOH B . H 4 HOH 91 3891 196 HOH HOH B . H 4 HOH 92 3892 199 HOH HOH B . H 4 HOH 93 3893 204 HOH HOH B . H 4 HOH 94 3894 213 HOH HOH B . H 4 HOH 95 3895 214 HOH HOH B . H 4 HOH 96 3896 215 HOH HOH B . H 4 HOH 97 3897 216 HOH HOH B . H 4 HOH 98 3898 218 HOH HOH B . H 4 HOH 99 3899 219 HOH HOH B . H 4 HOH 100 3900 220 HOH HOH B . H 4 HOH 101 3901 222 HOH HOH B . H 4 HOH 102 3902 223 HOH HOH B . H 4 HOH 103 3903 225 HOH HOH B . H 4 HOH 104 3904 227 HOH HOH B . H 4 HOH 105 3905 229 HOH HOH B . H 4 HOH 106 3906 230 HOH HOH B . H 4 HOH 107 3907 231 HOH HOH B . H 4 HOH 108 3908 232 HOH HOH B . H 4 HOH 109 3909 233 HOH HOH B . H 4 HOH 110 3910 237 HOH HOH B . H 4 HOH 111 3911 238 HOH HOH B . H 4 HOH 112 3912 239 HOH HOH B . H 4 HOH 113 3913 240 HOH HOH B . H 4 HOH 114 3914 241 HOH HOH B . H 4 HOH 115 3915 242 HOH HOH B . H 4 HOH 116 3916 243 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3900 ? 1 MORE -50 ? 1 'SSA (A^2)' 9340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-02 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.name' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 19.3461 30.7754 25.3372 0.0210 0.0868 0.0303 -0.0110 0.0064 -0.0117 1.9367 0.1917 1.0218 0.1398 -0.7513 0.1990 -0.0493 0.3136 -0.0751 -0.0201 0.0402 0.0058 -0.0039 -0.1277 0.0092 'X-RAY DIFFRACTION' 2 ? refined 15.8661 33.1665 35.3124 0.0208 0.0425 0.0301 -0.0010 0.0018 -0.0001 0.5429 0.0825 0.6948 -0.0219 -0.3801 -0.1189 0.0200 0.0359 0.0241 0.0070 0.0097 0.0070 -0.0152 -0.0376 -0.0298 'X-RAY DIFFRACTION' 3 ? refined 14.7977 33.7278 59.8278 0.0358 0.0392 0.0334 -0.0032 0.0032 -0.0010 0.0249 0.0725 1.2142 0.0300 -0.1344 -0.0410 0.0206 -0.0032 0.0068 0.0205 -0.0070 0.0157 -0.0706 -0.0022 -0.0136 'X-RAY DIFFRACTION' 4 ? refined 14.0954 24.8110 63.3124 0.0237 0.0413 0.0324 -0.0018 -0.0029 -0.0008 0.1631 0.1421 1.3848 0.1175 -0.4134 -0.1605 -0.0045 -0.0018 0.0022 -0.0003 -0.0035 0.0046 0.0374 -0.0083 0.0079 'X-RAY DIFFRACTION' 5 ? refined 21.1478 22.9164 32.2725 0.0200 0.0558 0.0619 -0.0070 0.0098 -0.0237 0.9744 0.3663 0.6985 0.5885 0.1865 0.1923 -0.0318 0.1192 -0.1815 -0.0244 0.0866 -0.1128 -0.0148 0.0479 -0.0548 'X-RAY DIFFRACTION' 6 ? refined 25.6254 31.8211 65.6468 0.0790 0.1368 0.0307 -0.0772 -0.0051 -0.0145 1.2349 0.4625 0.9540 0.7123 -1.0831 -0.6389 0.2092 -0.3280 0.0639 0.0729 -0.1504 0.0558 -0.1680 0.2784 -0.0588 'X-RAY DIFFRACTION' 7 ? refined 28.8844 34.2100 55.5102 0.0503 0.0612 0.0455 -0.0293 0.0087 -0.0133 1.7910 0.1070 1.5757 0.2357 -1.3435 -0.3843 0.1434 -0.1730 0.1454 0.0329 -0.0370 0.0203 -0.1498 0.1806 -0.1065 'X-RAY DIFFRACTION' 8 ? refined 29.9929 32.9699 31.3467 0.0236 0.0412 0.0339 -0.0043 0.0016 0.0004 0.5633 0.0348 0.7546 0.0479 -0.1393 -0.1545 -0.0055 0.0210 -0.0236 0.0061 0.0004 -0.0078 -0.0179 0.0327 0.0051 'X-RAY DIFFRACTION' 9 ? refined 30.8678 23.9769 28.5455 0.0195 0.0486 0.0513 -0.0056 0.0100 -0.0112 0.5150 0.2298 1.7761 -0.2007 -0.6783 0.1370 -0.0824 0.0871 -0.0955 0.0149 -0.0662 0.0069 0.1126 -0.0602 0.1487 'X-RAY DIFFRACTION' 10 ? refined 23.7245 23.5627 59.9677 0.0229 0.0492 0.0503 -0.0084 -0.0051 0.0115 2.2294 0.0137 7.2676 -0.1723 -0.6894 0.0055 -0.0055 -0.2040 -0.1863 -0.0025 0.0164 0.0153 0.2751 0.0318 -0.0109 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 3590 ? ? A 3595 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 3596 ? ? A 3606 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 3607 ? ? A 3627 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 3628 ? ? A 3650 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 3651 ? ? A 3671 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 3590 ? ? B 3595 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 3596 ? ? B 3606 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 3607 ? ? B 3627 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 3628 ? ? B 3650 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 B 3651 ? ? B 3672 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' Max ? 1 PHENIX 'model building' . ? 2 REFMAC refinement 5.5.0102 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 3589 ? A MET 1 2 1 Y 1 A GLU 3672 ? A GLU 84 3 1 Y 1 A HIS 3673 ? A HIS 85 4 1 Y 1 A HIS 3674 ? A HIS 86 5 1 Y 1 A HIS 3675 ? A HIS 87 6 1 Y 1 A HIS 3676 ? A HIS 88 7 1 Y 1 A HIS 3677 ? A HIS 89 8 1 Y 1 A HIS 3678 ? A HIS 90 9 1 Y 1 B MET 3589 ? B MET 1 10 1 Y 1 B HIS 3673 ? B HIS 85 11 1 Y 1 B HIS 3674 ? B HIS 86 12 1 Y 1 B HIS 3675 ? B HIS 87 13 1 Y 1 B HIS 3676 ? B HIS 88 14 1 Y 1 B HIS 3677 ? B HIS 89 15 1 Y 1 B HIS 3678 ? B HIS 90 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BR BR BR N N 74 CL CL CL N N 75 GLN N N N N 76 GLN CA C N S 77 GLN C C N N 78 GLN O O N N 79 GLN CB C N N 80 GLN CG C N N 81 GLN CD C N N 82 GLN OE1 O N N 83 GLN NE2 N N N 84 GLN OXT O N N 85 GLN H H N N 86 GLN H2 H N N 87 GLN HA H N N 88 GLN HB2 H N N 89 GLN HB3 H N N 90 GLN HG2 H N N 91 GLN HG3 H N N 92 GLN HE21 H N N 93 GLN HE22 H N N 94 GLN HXT H N N 95 GLU N N N N 96 GLU CA C N S 97 GLU C C N N 98 GLU O O N N 99 GLU CB C N N 100 GLU CG C N N 101 GLU CD C N N 102 GLU OE1 O N N 103 GLU OE2 O N N 104 GLU OXT O N N 105 GLU H H N N 106 GLU H2 H N N 107 GLU HA H N N 108 GLU HB2 H N N 109 GLU HB3 H N N 110 GLU HG2 H N N 111 GLU HG3 H N N 112 GLU HE2 H N N 113 GLU HXT H N N 114 GLY N N N N 115 GLY CA C N N 116 GLY C C N N 117 GLY O O N N 118 GLY OXT O N N 119 GLY H H N N 120 GLY H2 H N N 121 GLY HA2 H N N 122 GLY HA3 H N N 123 GLY HXT H N N 124 HIS N N N N 125 HIS CA C N S 126 HIS C C N N 127 HIS O O N N 128 HIS CB C N N 129 HIS CG C Y N 130 HIS ND1 N Y N 131 HIS CD2 C Y N 132 HIS CE1 C Y N 133 HIS NE2 N Y N 134 HIS OXT O N N 135 HIS H H N N 136 HIS H2 H N N 137 HIS HA H N N 138 HIS HB2 H N N 139 HIS HB3 H N N 140 HIS HD1 H N N 141 HIS HD2 H N N 142 HIS HE1 H N N 143 HIS HE2 H N N 144 HIS HXT H N N 145 HOH O O N N 146 HOH H1 H N N 147 HOH H2 H N N 148 ILE N N N N 149 ILE CA C N S 150 ILE C C N N 151 ILE O O N N 152 ILE CB C N S 153 ILE CG1 C N N 154 ILE CG2 C N N 155 ILE CD1 C N N 156 ILE OXT O N N 157 ILE H H N N 158 ILE H2 H N N 159 ILE HA H N N 160 ILE HB H N N 161 ILE HG12 H N N 162 ILE HG13 H N N 163 ILE HG21 H N N 164 ILE HG22 H N N 165 ILE HG23 H N N 166 ILE HD11 H N N 167 ILE HD12 H N N 168 ILE HD13 H N N 169 ILE HXT H N N 170 LEU N N N N 171 LEU CA C N S 172 LEU C C N N 173 LEU O O N N 174 LEU CB C N N 175 LEU CG C N N 176 LEU CD1 C N N 177 LEU CD2 C N N 178 LEU OXT O N N 179 LEU H H N N 180 LEU H2 H N N 181 LEU HA H N N 182 LEU HB2 H N N 183 LEU HB3 H N N 184 LEU HG H N N 185 LEU HD11 H N N 186 LEU HD12 H N N 187 LEU HD13 H N N 188 LEU HD21 H N N 189 LEU HD22 H N N 190 LEU HD23 H N N 191 LEU HXT H N N 192 LYS N N N N 193 LYS CA C N S 194 LYS C C N N 195 LYS O O N N 196 LYS CB C N N 197 LYS CG C N N 198 LYS CD C N N 199 LYS CE C N N 200 LYS NZ N N N 201 LYS OXT O N N 202 LYS H H N N 203 LYS H2 H N N 204 LYS HA H N N 205 LYS HB2 H N N 206 LYS HB3 H N N 207 LYS HG2 H N N 208 LYS HG3 H N N 209 LYS HD2 H N N 210 LYS HD3 H N N 211 LYS HE2 H N N 212 LYS HE3 H N N 213 LYS HZ1 H N N 214 LYS HZ2 H N N 215 LYS HZ3 H N N 216 LYS HXT H N N 217 MET N N N N 218 MET CA C N S 219 MET C C N N 220 MET O O N N 221 MET CB C N N 222 MET CG C N N 223 MET SD S N N 224 MET CE C N N 225 MET OXT O N N 226 MET H H N N 227 MET H2 H N N 228 MET HA H N N 229 MET HB2 H N N 230 MET HB3 H N N 231 MET HG2 H N N 232 MET HG3 H N N 233 MET HE1 H N N 234 MET HE2 H N N 235 MET HE3 H N N 236 MET HXT H N N 237 PHE N N N N 238 PHE CA C N S 239 PHE C C N N 240 PHE O O N N 241 PHE CB C N N 242 PHE CG C Y N 243 PHE CD1 C Y N 244 PHE CD2 C Y N 245 PHE CE1 C Y N 246 PHE CE2 C Y N 247 PHE CZ C Y N 248 PHE OXT O N N 249 PHE H H N N 250 PHE H2 H N N 251 PHE HA H N N 252 PHE HB2 H N N 253 PHE HB3 H N N 254 PHE HD1 H N N 255 PHE HD2 H N N 256 PHE HE1 H N N 257 PHE HE2 H N N 258 PHE HZ H N N 259 PHE HXT H N N 260 PRO N N N N 261 PRO CA C N S 262 PRO C C N N 263 PRO O O N N 264 PRO CB C N N 265 PRO CG C N N 266 PRO CD C N N 267 PRO OXT O N N 268 PRO H H N N 269 PRO HA H N N 270 PRO HB2 H N N 271 PRO HB3 H N N 272 PRO HG2 H N N 273 PRO HG3 H N N 274 PRO HD2 H N N 275 PRO HD3 H N N 276 PRO HXT H N N 277 SER N N N N 278 SER CA C N S 279 SER C C N N 280 SER O O N N 281 SER CB C N N 282 SER OG O N N 283 SER OXT O N N 284 SER H H N N 285 SER H2 H N N 286 SER HA H N N 287 SER HB2 H N N 288 SER HB3 H N N 289 SER HG H N N 290 SER HXT H N N 291 THR N N N N 292 THR CA C N S 293 THR C C N N 294 THR O O N N 295 THR CB C N R 296 THR OG1 O N N 297 THR CG2 C N N 298 THR OXT O N N 299 THR H H N N 300 THR H2 H N N 301 THR HA H N N 302 THR HB H N N 303 THR HG1 H N N 304 THR HG21 H N N 305 THR HG22 H N N 306 THR HG23 H N N 307 THR HXT H N N 308 TYR N N N N 309 TYR CA C N S 310 TYR C C N N 311 TYR O O N N 312 TYR CB C N N 313 TYR CG C Y N 314 TYR CD1 C Y N 315 TYR CD2 C Y N 316 TYR CE1 C Y N 317 TYR CE2 C Y N 318 TYR CZ C Y N 319 TYR OH O N N 320 TYR OXT O N N 321 TYR H H N N 322 TYR H2 H N N 323 TYR HA H N N 324 TYR HB2 H N N 325 TYR HB3 H N N 326 TYR HD1 H N N 327 TYR HD2 H N N 328 TYR HE1 H N N 329 TYR HE2 H N N 330 TYR HH H N N 331 TYR HXT H N N 332 VAL N N N N 333 VAL CA C N S 334 VAL C C N N 335 VAL O O N N 336 VAL CB C N N 337 VAL CG1 C N N 338 VAL CG2 C N N 339 VAL OXT O N N 340 VAL H H N N 341 VAL H2 H N N 342 VAL HA H N N 343 VAL HB H N N 344 VAL HG11 H N N 345 VAL HG12 H N N 346 VAL HG13 H N N 347 VAL HG21 H N N 348 VAL HG22 H N N 349 VAL HG23 H N N 350 VAL HXT H N N 351 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'BROMIDE ION' BR 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2EBF _pdbx_initial_refinement_model.details ? #