HEADER PROTEIN BINDING 20-APR-12 4ERR TITLE 1.55 ANGSTROM CRYSTAL STRUCTURE OF THE FOUR HELICAL BUNDLE MEMBRANE TITLE 2 LOCALIZATION DOMAIN (4HBM) OF THE VIBRIO VULNIFICUS MARTX EFFECTOR TITLE 3 DOMAIN DUF5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUTOTRANSPORTER ADHESIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EFFECTOR DOMAIN DUF5 (UNP RESIDUES 3591-3669); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO VULNIFICUS; SOURCE 3 ORGANISM_TAXID: 672; SOURCE 4 STRAIN: CMCP6; SOURCE 5 GENE: VV2_0479; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PYCPET KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID, FOUR HELICAL BUNDLE MEMBRANE LOCALIZATION DOMAIN, KEYWDS 4 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,Z.WAWRZAK,B.GEISSLER,L.SHUVALOVA,I.DUBROVSKA,J.WINSOR, AUTHOR 2 K.J.SATCHELL,W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 3 INFECTIOUS DISEASES (CSGID) REVDAT 3 13-SEP-23 4ERR 1 REMARK SEQADV REVDAT 2 15-NOV-17 4ERR 1 REMARK REVDAT 1 02-MAY-12 4ERR 0 JRNL AUTH G.MINASOV,Z.WAWRZAK,B.GEISSLER,L.SHUVALOVA,I.DUBROVSKA, JRNL AUTH 2 J.WINSOR,K.J.SATCHELL,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 1.55 ANGSTROM CRYSTAL STRUCTURE OF THE FOUR HELICAL BUNDLE JRNL TITL 2 MEMBRANE LOCALIZATION DOMAIN (4HBM) OF THE VIBRIO VULNIFICUS JRNL TITL 3 MARTX EFFECTOR DOMAIN DUF5. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 22766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1223 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1607 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1285 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 239 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.50000 REMARK 3 B22 (A**2) : 1.19000 REMARK 3 B33 (A**2) : -0.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.134 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.576 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1538 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1065 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2098 ; 1.187 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2651 ; 0.852 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 211 ; 3.671 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 73 ;38.114 ;26.438 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 310 ;13.260 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;10.595 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 227 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1823 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 283 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 963 ; 1.970 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 386 ; 0.828 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1573 ; 3.268 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 575 ; 4.420 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 525 ; 6.532 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2603 ; 1.063 ; 1.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3590 A 3595 REMARK 3 ORIGIN FOR THE GROUP (A): 19.3461 30.7754 25.3372 REMARK 3 T TENSOR REMARK 3 T11: 0.0210 T22: 0.0868 REMARK 3 T33: 0.0303 T12: -0.0110 REMARK 3 T13: 0.0064 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.9367 L22: 0.1917 REMARK 3 L33: 1.0218 L12: 0.1398 REMARK 3 L13: -0.7513 L23: 0.1990 REMARK 3 S TENSOR REMARK 3 S11: -0.0493 S12: 0.3136 S13: -0.0751 REMARK 3 S21: -0.0201 S22: 0.0402 S23: 0.0058 REMARK 3 S31: -0.0039 S32: -0.1277 S33: 0.0092 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3596 A 3606 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8661 33.1665 35.3124 REMARK 3 T TENSOR REMARK 3 T11: 0.0208 T22: 0.0425 REMARK 3 T33: 0.0301 T12: -0.0010 REMARK 3 T13: 0.0018 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.5429 L22: 0.0825 REMARK 3 L33: 0.6948 L12: -0.0219 REMARK 3 L13: -0.3801 L23: -0.1189 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: 0.0359 S13: 0.0241 REMARK 3 S21: 0.0070 S22: 0.0097 S23: 0.0070 REMARK 3 S31: -0.0152 S32: -0.0376 S33: -0.0298 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3607 A 3627 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7977 33.7278 59.8278 REMARK 3 T TENSOR REMARK 3 T11: 0.0358 T22: 0.0392 REMARK 3 T33: 0.0334 T12: -0.0032 REMARK 3 T13: 0.0032 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.0249 L22: 0.0725 REMARK 3 L33: 1.2142 L12: 0.0300 REMARK 3 L13: -0.1344 L23: -0.0410 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: -0.0032 S13: 0.0068 REMARK 3 S21: 0.0205 S22: -0.0070 S23: 0.0157 REMARK 3 S31: -0.0706 S32: -0.0022 S33: -0.0136 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3628 A 3650 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0954 24.8110 63.3124 REMARK 3 T TENSOR REMARK 3 T11: 0.0237 T22: 0.0413 REMARK 3 T33: 0.0324 T12: -0.0018 REMARK 3 T13: -0.0029 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.1631 L22: 0.1421 REMARK 3 L33: 1.3848 L12: 0.1175 REMARK 3 L13: -0.4134 L23: -0.1605 REMARK 3 S TENSOR REMARK 3 S11: -0.0045 S12: -0.0018 S13: 0.0022 REMARK 3 S21: -0.0003 S22: -0.0035 S23: 0.0046 REMARK 3 S31: 0.0374 S32: -0.0083 S33: 0.0079 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3651 A 3671 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1478 22.9164 32.2725 REMARK 3 T TENSOR REMARK 3 T11: 0.0200 T22: 0.0558 REMARK 3 T33: 0.0619 T12: -0.0070 REMARK 3 T13: 0.0098 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 0.9744 L22: 0.3663 REMARK 3 L33: 0.6985 L12: 0.5885 REMARK 3 L13: 0.1865 L23: 0.1923 REMARK 3 S TENSOR REMARK 3 S11: -0.0318 S12: 0.1192 S13: -0.1815 REMARK 3 S21: -0.0244 S22: 0.0866 S23: -0.1128 REMARK 3 S31: -0.0148 S32: 0.0479 S33: -0.0548 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3590 B 3595 REMARK 3 ORIGIN FOR THE GROUP (A): 25.6254 31.8211 65.6468 REMARK 3 T TENSOR REMARK 3 T11: 0.0790 T22: 0.1368 REMARK 3 T33: 0.0307 T12: -0.0772 REMARK 3 T13: -0.0051 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 1.2349 L22: 0.4625 REMARK 3 L33: 0.9540 L12: 0.7123 REMARK 3 L13: -1.0831 L23: -0.6389 REMARK 3 S TENSOR REMARK 3 S11: 0.2092 S12: -0.3280 S13: 0.0639 REMARK 3 S21: 0.0729 S22: -0.1504 S23: 0.0558 REMARK 3 S31: -0.1680 S32: 0.2784 S33: -0.0588 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3596 B 3606 REMARK 3 ORIGIN FOR THE GROUP (A): 28.8844 34.2100 55.5102 REMARK 3 T TENSOR REMARK 3 T11: 0.0503 T22: 0.0612 REMARK 3 T33: 0.0455 T12: -0.0293 REMARK 3 T13: 0.0087 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 1.7910 L22: 0.1070 REMARK 3 L33: 1.5757 L12: 0.2357 REMARK 3 L13: -1.3435 L23: -0.3843 REMARK 3 S TENSOR REMARK 3 S11: 0.1434 S12: -0.1730 S13: 0.1454 REMARK 3 S21: 0.0329 S22: -0.0370 S23: 0.0203 REMARK 3 S31: -0.1498 S32: 0.1806 S33: -0.1065 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3607 B 3627 REMARK 3 ORIGIN FOR THE GROUP (A): 29.9929 32.9699 31.3467 REMARK 3 T TENSOR REMARK 3 T11: 0.0236 T22: 0.0412 REMARK 3 T33: 0.0339 T12: -0.0043 REMARK 3 T13: 0.0016 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.5633 L22: 0.0348 REMARK 3 L33: 0.7546 L12: 0.0479 REMARK 3 L13: -0.1393 L23: -0.1545 REMARK 3 S TENSOR REMARK 3 S11: -0.0055 S12: 0.0210 S13: -0.0236 REMARK 3 S21: 0.0061 S22: 0.0004 S23: -0.0078 REMARK 3 S31: -0.0179 S32: 0.0327 S33: 0.0051 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3628 B 3650 REMARK 3 ORIGIN FOR THE GROUP (A): 30.8678 23.9769 28.5455 REMARK 3 T TENSOR REMARK 3 T11: 0.0195 T22: 0.0486 REMARK 3 T33: 0.0513 T12: -0.0056 REMARK 3 T13: 0.0100 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.5150 L22: 0.2298 REMARK 3 L33: 1.7761 L12: -0.2007 REMARK 3 L13: -0.6783 L23: 0.1370 REMARK 3 S TENSOR REMARK 3 S11: -0.0824 S12: 0.0871 S13: -0.0955 REMARK 3 S21: 0.0149 S22: -0.0662 S23: 0.0069 REMARK 3 S31: 0.1126 S32: -0.0602 S33: 0.1487 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3651 B 3672 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7245 23.5627 59.9677 REMARK 3 T TENSOR REMARK 3 T11: 0.0229 T22: 0.0492 REMARK 3 T33: 0.0503 T12: -0.0084 REMARK 3 T13: -0.0051 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 2.2294 L22: 0.0137 REMARK 3 L33: 7.2676 L12: -0.1723 REMARK 3 L13: -0.6894 L23: 0.0055 REMARK 3 S TENSOR REMARK 3 S11: -0.0055 S12: -0.2040 S13: -0.1863 REMARK 3 S21: -0.0025 S22: 0.0164 S23: 0.0153 REMARK 3 S31: 0.2751 S32: 0.0318 S33: -0.0109 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4ERR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071987. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24039 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.55500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2EBF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 13MG/ML, 0.1M SODIUM REMARK 280 CHLORIDE, TRIS-HCL PH 7.0, 6.9 MM PHOSPHATIDYLSERINE (PS); REMARK 280 SCREEN: JCSG+ (G10), 0.15M POTASSIUM BROMIDE, 30% W/V PEG MME REMARK 280 2000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.44800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.05100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.93700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.05100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.44800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.93700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3589 REMARK 465 GLU A 3672 REMARK 465 HIS A 3673 REMARK 465 HIS A 3674 REMARK 465 HIS A 3675 REMARK 465 HIS A 3676 REMARK 465 HIS A 3677 REMARK 465 HIS A 3678 REMARK 465 MET B 3589 REMARK 465 HIS B 3673 REMARK 465 HIS B 3674 REMARK 465 HIS B 3675 REMARK 465 HIS B 3676 REMARK 465 HIS B 3677 REMARK 465 HIS B 3678 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 3701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 3702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR B 3701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 3702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP91511 RELATED DB: TARGETTRACK DBREF 4ERR A 3591 3669 UNP Q8D6P9 Q8D6P9_VIBVU 3591 3669 DBREF 4ERR B 3591 3669 UNP Q8D6P9 Q8D6P9_VIBVU 3591 3669 SEQADV 4ERR MET A 3589 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR GLY A 3590 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR GLY A 3670 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR LEU A 3671 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR GLU A 3672 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS A 3673 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS A 3674 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS A 3675 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS A 3676 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS A 3677 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS A 3678 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR MET B 3589 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR GLY B 3590 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR GLY B 3670 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR LEU B 3671 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR GLU B 3672 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS B 3673 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS B 3674 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS B 3675 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS B 3676 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS B 3677 UNP Q8D6P9 EXPRESSION TAG SEQADV 4ERR HIS B 3678 UNP Q8D6P9 EXPRESSION TAG SEQRES 1 A 90 MET GLY GLN ILE PHE THR VAL GLN GLU LEU LYS GLU ARG SEQRES 2 A 90 ALA LYS VAL PHE ALA LYS PRO ILE GLY ALA SER TYR GLN SEQRES 3 A 90 GLY ILE LEU ASP GLN LEU ASP LEU VAL HIS GLN ALA LYS SEQRES 4 A 90 GLY ARG ASP GLN ILE ALA ALA SER PHE GLU LEU ASN LYS SEQRES 5 A 90 LYS ILE ASN ASP TYR ILE ALA GLU HIS PRO THR SER GLY SEQRES 6 A 90 ARG ASN GLN ALA LEU THR GLN LEU LYS GLU GLN VAL THR SEQRES 7 A 90 SER ALA LEU GLY LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 90 MET GLY GLN ILE PHE THR VAL GLN GLU LEU LYS GLU ARG SEQRES 2 B 90 ALA LYS VAL PHE ALA LYS PRO ILE GLY ALA SER TYR GLN SEQRES 3 B 90 GLY ILE LEU ASP GLN LEU ASP LEU VAL HIS GLN ALA LYS SEQRES 4 B 90 GLY ARG ASP GLN ILE ALA ALA SER PHE GLU LEU ASN LYS SEQRES 5 B 90 LYS ILE ASN ASP TYR ILE ALA GLU HIS PRO THR SER GLY SEQRES 6 B 90 ARG ASN GLN ALA LEU THR GLN LEU LYS GLU GLN VAL THR SEQRES 7 B 90 SER ALA LEU GLY LEU GLU HIS HIS HIS HIS HIS HIS HET BR A3701 1 HET CL A3702 1 HET BR B3701 1 HET CL B3702 1 HETNAM BR BROMIDE ION HETNAM CL CHLORIDE ION FORMUL 3 BR 2(BR 1-) FORMUL 4 CL 2(CL 1-) FORMUL 7 HOH *239(H2 O) HELIX 1 1 THR A 3594 ALA A 3626 1 33 HELIX 2 2 LYS A 3627 HIS A 3649 1 23 HELIX 3 3 SER A 3652 GLY A 3670 1 19 HELIX 4 4 THR B 3594 ALA B 3626 1 33 HELIX 5 5 GLY B 3628 HIS B 3649 1 22 HELIX 6 6 SER B 3652 GLY B 3670 1 19 SITE 1 AC1 5 SER A3652 TYR B3645 SER B3652 CL B3702 SITE 2 AC1 5 HOH B3809 SITE 1 AC2 4 GLY A3653 HOH A3808 BR B3701 HOH B3805 SITE 1 AC3 4 TYR A3645 CL A3702 SER B3652 ASN B3655 SITE 1 AC4 4 BR A3701 GLY B3653 HOH B3803 HOH B3822 CRYST1 44.896 49.874 72.102 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022274 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020051 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013869 0.00000