HEADER METAL TRANSPORT 24-APR-12 4ETV TITLE CRYSTAL STRUCTURE OF MOUSE RYANODINE RECEPTOR 2 (2699-2904) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RYANODINE RECEPTOR 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RYR-2, RYR2, CARDIAC MUSCLE RYANODINE RECEPTOR, CARDIAC COMPND 5 MUSCLE RYANODINE RECEPTOR-CALCIUM RELEASE CHANNEL, TYPE 2 RYANODINE COMPND 6 RECEPTOR; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RYR2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3)PLACI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28HMT KEYWDS RYANODINE RECEPTOR CALCIUM RELEASE CHANNEL, PHOSPHORYLATION, MUSCLE, KEYWDS 2 CARDIAC, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR Z.YUCHI,K.LAU,F.VAN PETEGEM REVDAT 4 27-NOV-24 4ETV 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4ETV 1 REMARK REVDAT 2 17-OCT-12 4ETV 1 JRNL REVDAT 1 13-JUN-12 4ETV 0 JRNL AUTH Z.YUCHI,K.LAU,F.VAN PETEGEM JRNL TITL DISEASE MUTATIONS IN THE RYANODINE RECEPTOR CENTRAL REGION: JRNL TITL 2 CRYSTAL STRUCTURES OF A PHOSPHORYLATION HOT SPOT DOMAIN. JRNL REF STRUCTURE V. 20 1201 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22705209 JRNL DOI 10.1016/J.STR.2012.04.015 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 55490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2921 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4022 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 212 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2628 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 329 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29000 REMARK 3 B22 (A**2) : -0.79000 REMARK 3 B33 (A**2) : 0.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2738 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3710 ; 1.331 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 332 ; 4.629 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;38.779 ;24.524 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 448 ;12.727 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;14.187 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 394 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2063 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4ETV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000072062. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 WITH CRYO-COOLED 1ST CRYSTAL REMARK 200 SAGITTALLY BENT 2ND CRYSTAL REMARK 200 FOLLOWED BY VERTICALLY FOCUSING REMARK 200 MIRROR REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMATOR, REMARK 200 MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58410 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.14100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.01600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9% PEG3350, 0.1M BICINE, PH 9, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.45000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.03500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.11000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.03500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.45000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.11000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2696 REMARK 465 ASN A 2697 REMARK 465 ALA A 2698 REMARK 465 ASN A 2699 REMARK 465 ARG A 2802 REMARK 465 THR A 2803 REMARK 465 ARG A 2804 REMARK 465 ARG A 2805 REMARK 465 ILE A 2806 REMARK 465 SER A 2807 REMARK 465 GLN A 2808 REMARK 465 THR A 2809 REMARK 465 SER A 2810 REMARK 465 GLN A 2811 REMARK 465 VAL A 2812 REMARK 465 SER A 2813 REMARK 465 ILE A 2814 REMARK 465 ASP A 2815 REMARK 465 SER B 2696 REMARK 465 ASN B 2697 REMARK 465 ALA B 2698 REMARK 465 LYS B 2730 REMARK 465 TRP B 2731 REMARK 465 SER B 2732 REMARK 465 MSE B 2733 REMARK 465 ASP B 2734 REMARK 465 LYS B 2735 REMARK 465 LEU B 2736 REMARK 465 ALA B 2737 REMARK 465 ASN B 2738 REMARK 465 GLY B 2739 REMARK 465 TRP B 2740 REMARK 465 ILE B 2741 REMARK 465 TYR B 2742 REMARK 465 GLY B 2743 REMARK 465 GLU B 2744 REMARK 465 ILE B 2745 REMARK 465 TYR B 2746 REMARK 465 SER B 2747 REMARK 465 ASP B 2748 REMARK 465 SER B 2749 REMARK 465 SER B 2750 REMARK 465 LYS B 2751 REMARK 465 ILE B 2752 REMARK 465 GLN B 2753 REMARK 465 PRO B 2754 REMARK 465 LEU B 2755 REMARK 465 MSE B 2756 REMARK 465 LYS B 2757 REMARK 465 PRO B 2758 REMARK 465 TYR B 2759 REMARK 465 LYS B 2760 REMARK 465 LEU B 2761 REMARK 465 LEU B 2762 REMARK 465 GLU B 2793 REMARK 465 GLY B 2794 REMARK 465 ASP B 2795 REMARK 465 SER B 2796 REMARK 465 MSE B 2797 REMARK 465 ALA B 2798 REMARK 465 LEU B 2799 REMARK 465 TYR B 2800 REMARK 465 ASN B 2801 REMARK 465 ARG B 2802 REMARK 465 THR B 2803 REMARK 465 ARG B 2804 REMARK 465 ARG B 2805 REMARK 465 ILE B 2806 REMARK 465 SER B 2807 REMARK 465 GLN B 2808 REMARK 465 THR B 2809 REMARK 465 SER B 2810 REMARK 465 GLN B 2811 REMARK 465 VAL B 2812 REMARK 465 SER B 2813 REMARK 465 ILE B 2814 REMARK 465 ASP B 2815 REMARK 465 ALA B 2816 REMARK 465 ALA B 2817 REMARK 465 HIS B 2818 REMARK 465 GLY B 2819 REMARK 465 TYR B 2820 REMARK 465 SER B 2821 REMARK 465 PRO B 2822 REMARK 465 ARG B 2823 REMARK 465 ALA B 2824 REMARK 465 ILE B 2825 REMARK 465 SER B 2861 REMARK 465 LYS B 2862 REMARK 465 GLY B 2863 REMARK 465 GLY B 2864 REMARK 465 GLY B 2865 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A2765 CG CD CE NZ REMARK 470 ARG A2823 CG CD NE CZ NH1 NH2 REMARK 470 ARG A2834 CG CD NE CZ NH1 NH2 REMARK 470 GLU A2860 CG CD OE1 OE2 REMARK 470 ASN A2866 CG OD1 ND2 REMARK 470 ASP A2874 CG OD1 OD2 REMARK 470 GLU B2714 CG CD OE1 OE2 REMARK 470 LYS B2715 CG CD CE NZ REMARK 470 GLU B2717 CG CD OE1 OE2 REMARK 470 LYS B2722 CG CD CE NZ REMARK 470 GLU B2766 CG CD OE1 OE2 REMARK 470 ARG B2787 CG CD NE CZ NH1 NH2 REMARK 470 ARG B2792 CG CD NE CZ NH1 NH2 REMARK 470 LYS B2854 CG CD CE NZ REMARK 470 GLU B2860 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 2845 O HOH B 3194 1.42 REMARK 500 OD1 ASN A 2721 NH1 ARG A 2771 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A2818 14.50 59.32 REMARK 500 ASN B2701 75.33 -118.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 3001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ERT RELATED DB: PDB REMARK 900 RYR1 2734-2940 REMARK 900 RELATED ID: 4ERV RELATED DB: PDB REMARK 900 RYR3 2597-2800 REMARK 900 RELATED ID: 4ETT RELATED DB: PDB REMARK 900 RYR1 E2764K REMARK 900 RELATED ID: 4ESU RELATED DB: PDB REMARK 900 RYR1 S2776M REMARK 900 RELATED ID: 4ETU RELATED DB: PDB REMARK 900 RYR1 R2939S DBREF 4ETV A 2699 2904 UNP E9Q401 RYR2_MOUSE 2699 2904 DBREF 4ETV B 2699 2904 UNP E9Q401 RYR2_MOUSE 2699 2904 SEQADV 4ETV SER A 2696 UNP E9Q401 EXPRESSION TAG SEQADV 4ETV ASN A 2697 UNP E9Q401 EXPRESSION TAG SEQADV 4ETV ALA A 2698 UNP E9Q401 EXPRESSION TAG SEQADV 4ETV ALA A 2879 UNP E9Q401 LYS 2879 ENGINEERED MUTATION SEQADV 4ETV SER B 2696 UNP E9Q401 EXPRESSION TAG SEQADV 4ETV ASN B 2697 UNP E9Q401 EXPRESSION TAG SEQADV 4ETV ALA B 2698 UNP E9Q401 EXPRESSION TAG SEQADV 4ETV ALA B 2879 UNP E9Q401 LYS 2879 ENGINEERED MUTATION SEQRES 1 A 209 SER ASN ALA ASN PHE ASN PRO GLN PRO VAL ASP THR SER SEQRES 2 A 209 ASN ILE THR ILE PRO GLU LYS LEU GLU TYR PHE ILE ASN SEQRES 3 A 209 LYS TYR ALA GLU HIS SER HIS ASP LYS TRP SER MSE ASP SEQRES 4 A 209 LYS LEU ALA ASN GLY TRP ILE TYR GLY GLU ILE TYR SER SEQRES 5 A 209 ASP SER SER LYS ILE GLN PRO LEU MSE LYS PRO TYR LYS SEQRES 6 A 209 LEU LEU SER GLU LYS GLU LYS GLU ILE TYR ARG TRP PRO SEQRES 7 A 209 ILE LYS GLU SER LEU LYS THR MSE LEU ALA TRP GLY TRP SEQRES 8 A 209 ARG ILE GLU ARG THR ARG GLU GLY ASP SER MSE ALA LEU SEQRES 9 A 209 TYR ASN ARG THR ARG ARG ILE SER GLN THR SER GLN VAL SEQRES 10 A 209 SER ILE ASP ALA ALA HIS GLY TYR SER PRO ARG ALA ILE SEQRES 11 A 209 ASP MSE SER ASN VAL THR LEU SER ARG ASP LEU HIS ALA SEQRES 12 A 209 MSE ALA GLU MSE MSE ALA GLU ASN TYR HIS ASN ILE TRP SEQRES 13 A 209 ALA LYS LYS LYS LYS LEU GLU LEU GLU SER LYS GLY GLY SEQRES 14 A 209 GLY ASN HIS PRO LEU LEU VAL PRO TYR ASP THR LEU THR SEQRES 15 A 209 ALA ALA GLU LYS ALA LYS ASP ARG GLU LYS ALA GLN ASP SEQRES 16 A 209 ILE PHE LYS PHE LEU GLN ILE SER GLY TYR VAL VAL SER SEQRES 17 A 209 ARG SEQRES 1 B 209 SER ASN ALA ASN PHE ASN PRO GLN PRO VAL ASP THR SER SEQRES 2 B 209 ASN ILE THR ILE PRO GLU LYS LEU GLU TYR PHE ILE ASN SEQRES 3 B 209 LYS TYR ALA GLU HIS SER HIS ASP LYS TRP SER MSE ASP SEQRES 4 B 209 LYS LEU ALA ASN GLY TRP ILE TYR GLY GLU ILE TYR SER SEQRES 5 B 209 ASP SER SER LYS ILE GLN PRO LEU MSE LYS PRO TYR LYS SEQRES 6 B 209 LEU LEU SER GLU LYS GLU LYS GLU ILE TYR ARG TRP PRO SEQRES 7 B 209 ILE LYS GLU SER LEU LYS THR MSE LEU ALA TRP GLY TRP SEQRES 8 B 209 ARG ILE GLU ARG THR ARG GLU GLY ASP SER MSE ALA LEU SEQRES 9 B 209 TYR ASN ARG THR ARG ARG ILE SER GLN THR SER GLN VAL SEQRES 10 B 209 SER ILE ASP ALA ALA HIS GLY TYR SER PRO ARG ALA ILE SEQRES 11 B 209 ASP MSE SER ASN VAL THR LEU SER ARG ASP LEU HIS ALA SEQRES 12 B 209 MSE ALA GLU MSE MSE ALA GLU ASN TYR HIS ASN ILE TRP SEQRES 13 B 209 ALA LYS LYS LYS LYS LEU GLU LEU GLU SER LYS GLY GLY SEQRES 14 B 209 GLY ASN HIS PRO LEU LEU VAL PRO TYR ASP THR LEU THR SEQRES 15 B 209 ALA ALA GLU LYS ALA LYS ASP ARG GLU LYS ALA GLN ASP SEQRES 16 B 209 ILE PHE LYS PHE LEU GLN ILE SER GLY TYR VAL VAL SER SEQRES 17 B 209 ARG MODRES 4ETV MSE A 2733 MET SELENOMETHIONINE MODRES 4ETV MSE A 2756 MET SELENOMETHIONINE MODRES 4ETV MSE A 2781 MET SELENOMETHIONINE MODRES 4ETV MSE A 2797 MET SELENOMETHIONINE MODRES 4ETV MSE A 2827 MET SELENOMETHIONINE MODRES 4ETV MSE A 2839 MET SELENOMETHIONINE MODRES 4ETV MSE A 2842 MET SELENOMETHIONINE MODRES 4ETV MSE A 2843 MET SELENOMETHIONINE MODRES 4ETV MSE B 2781 MET SELENOMETHIONINE MODRES 4ETV MSE B 2827 MET SELENOMETHIONINE MODRES 4ETV MSE B 2839 MET SELENOMETHIONINE MODRES 4ETV MSE B 2842 MET SELENOMETHIONINE MODRES 4ETV MSE B 2843 MET SELENOMETHIONINE HET MSE A2733 8 HET MSE A2756 8 HET MSE A2781 8 HET MSE A2797 8 HET MSE A2827 8 HET MSE A2839 8 HET MSE A2842 8 HET MSE A2843 8 HET MSE B2781 8 HET MSE B2827 8 HET MSE B2839 8 HET MSE B2842 8 HET MSE B2843 8 HET CL B3001 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION FORMUL 1 MSE 13(C5 H11 N O2 SE) FORMUL 3 CL CL 1- FORMUL 4 HOH *329(H2 O) HELIX 1 1 PRO A 2713 LYS A 2715 5 3 HELIX 2 2 LEU A 2716 ASN A 2738 1 23 HELIX 3 3 PRO A 2758 LEU A 2762 5 5 HELIX 4 4 SER A 2763 TRP A 2784 1 22 HELIX 5 5 ASP A 2795 TYR A 2800 5 6 HELIX 6 6 ALA A 2816 TYR A 2820 5 5 HELIX 7 7 ASP A 2826 VAL A 2830 5 5 HELIX 8 8 SER A 2833 LYS A 2862 1 30 HELIX 9 9 PRO A 2872 LEU A 2876 5 5 HELIX 10 10 THR A 2877 GLY A 2899 1 23 HELIX 11 11 PRO B 2713 LYS B 2715 5 3 HELIX 12 12 LEU B 2716 ASP B 2729 1 14 HELIX 13 13 GLU B 2764 TRP B 2784 1 21 HELIX 14 14 SER B 2833 GLU B 2860 1 28 HELIX 15 15 PRO B 2872 LEU B 2876 5 5 HELIX 16 16 THR B 2877 SER B 2898 1 22 SHEET 1 A 2 ARG A2787 ARG A2790 0 SHEET 2 A 2 TYR A2900 SER A2903 -1 O VAL A2901 N GLU A2789 SHEET 1 B 2 ARG B2787 ARG B2790 0 SHEET 2 B 2 TYR B2900 SER B2903 -1 O VAL B2901 N GLU B2789 LINK C SER A2732 N MSE A2733 1555 1555 1.34 LINK C MSE A2733 N ASP A2734 1555 1555 1.34 LINK C LEU A2755 N MSE A2756 1555 1555 1.34 LINK C MSE A2756 N LYS A2757 1555 1555 1.33 LINK C THR A2780 N MSE A2781 1555 1555 1.34 LINK C MSE A2781 N LEU A2782 1555 1555 1.32 LINK C SER A2796 N MSE A2797 1555 1555 1.33 LINK C MSE A2797 N ALA A2798 1555 1555 1.33 LINK C ASP A2826 N MSE A2827 1555 1555 1.32 LINK C MSE A2827 N SER A2828 1555 1555 1.35 LINK C ALA A2838 N MSE A2839 1555 1555 1.32 LINK C MSE A2839 N ALA A2840 1555 1555 1.33 LINK C GLU A2841 N MSE A2842 1555 1555 1.34 LINK C MSE A2842 N MSE A2843 1555 1555 1.34 LINK C MSE A2843 N ALA A2844 1555 1555 1.34 LINK C THR B2780 N MSE B2781 1555 1555 1.34 LINK C MSE B2781 N LEU B2782 1555 1555 1.32 LINK C ASP B2826 N MSE B2827 1555 1555 1.33 LINK C MSE B2827 N SER B2828 1555 1555 1.33 LINK C ALA B2838 N MSE B2839 1555 1555 1.33 LINK C MSE B2839 N ALA B2840 1555 1555 1.33 LINK C GLU B2841 N MSE B2842 1555 1555 1.34 LINK C MSE B2842 N MSE B2843 1555 1555 1.34 LINK C MSE B2843 N ALA B2844 1555 1555 1.34 SITE 1 AC1 2 TRP A2851 ARG B2834 CRYST1 58.900 88.220 92.070 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016978 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011335 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010861 0.00000