HEADER TRANSPORT PROTEIN 30-APR-12 4EXK TITLE A CHIMERA PROTEIN CONTAINING MBP FUSED TO THE C-TERMINAL DOMAIN OF THE TITLE 2 UNCHARACTERIZED PROTEIN STM14_2015 FROM SALMONELLA ENTERICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOSE-BINDING PERIPLASMIC PROTEIN, UNCHARACTERIZED COMPND 3 PROTEIN CHIMERA; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: MBP, MMBP, MALTODEXTRIN-BINDING PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, SALMONELLA ENTERICA SUBSP. SOURCE 3 ENTERICA SEROVAR TYPHIMURIUM STR. 14028S; SOURCE 4 ORGANISM_TAXID: 83333, 588858; SOURCE 5 STRAIN: K12, LT2 / SGSC1412 / ATCC 700720; SOURCE 6 GENE: MALE, B4034, JW3994, STM14_2015, STM1668; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PMCSG30 KEYWDS MCSG, PCSEP, MBP-FUSED TARGET, STRUCTURAL GENOMICS, PSI-BIOLOGY, KEYWDS 2 PROGRAM FOR THE CHARACTERIZATION OF SECRETED EFFECTOR PROTEINS, KEYWDS 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MBP, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,C.HATZOS-SKINTGES,R.JEDRZEJCZAK,G.BABNIGG,R.N.BROWN,J.R.CORT, AUTHOR 2 F.HEFFRON,E.S.NAKAYASU,J.N.ADKINS,A.JOACHIMIAK,PROGRAM FOR THE AUTHOR 3 CHARACTERIZATION OF SECRETED EFFECTOR PROTEINS (PCSEP),MIDWEST AUTHOR 4 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 5 13-SEP-23 4EXK 1 HETSYN REVDAT 4 29-JUL-20 4EXK 1 COMPND REMARK SEQADV HET REVDAT 4 2 1 HETNAM FORMUL LINK SITE REVDAT 4 3 1 ATOM REVDAT 3 16-AUG-17 4EXK 1 SOURCE REMARK REVDAT 2 22-AUG-12 4EXK 1 AUTHOR JRNL REVDAT 1 08-AUG-12 4EXK 0 JRNL AUTH B.NOCEK,C.HATZOS-SKINTGES,R.JEDRZEJCZAK,G.BABNIGG,R.N.BROWN, JRNL AUTH 2 J.R.CORT,F.HEFFRON,E.S.NAKAYASU,J.N.ADKINS,A.JOACHIMIAK JRNL TITL A CHIMERA PROTEIN CONTAINING MBP FUSED TO THE C-TERMINAL JRNL TITL 2 DOMAIN OF THE UNCHARACTERIZED PROTEIN STM14_2015 FORM JRNL TITL 3 SALMONELLA ENTERICA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.6 REMARK 3 NUMBER OF REFLECTIONS : 92285 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4827 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.28 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.32 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2800 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 36.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.1790 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3602 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 492 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.40000 REMARK 3 B22 (A**2) : 0.40000 REMARK 3 B33 (A**2) : -0.60000 REMARK 3 B12 (A**2) : 0.20000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.052 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.030 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.538 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.967 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3883 ; 0.017 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2567 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5329 ; 2.203 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6366 ; 3.863 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 521 ; 6.133 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;34.207 ;25.577 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 634 ;13.420 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;14.352 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 616 ; 0.191 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4343 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 735 ; 0.008 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6449 ; 4.031 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 56 ;44.202 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6773 ;12.977 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4EXK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072194. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 103107 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3HPI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 25 % PEG 3320, REMARK 280 PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 120.60800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.30400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 60.30400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 120.60800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -60.30400 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 845 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -3 REMARK 465 ASN A -2 REMARK 465 ALA A -1 REMARK 465 LEU A 475 REMARK 465 SER A 476 REMARK 465 SER A 477 REMARK 465 VAL A 478 REMARK 465 LYS A 479 REMARK 465 ASN A 480 REMARK 465 ASN A 481 REMARK 465 ILE A 482 REMARK 465 GLY A 483 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 1 CG CD CE NZ REMARK 470 LYS A 29 CE NZ REMARK 470 LYS A 34 CD CE NZ REMARK 470 ASP A 55 CG OD1 OD2 REMARK 470 LYS A 127 CG CD CE NZ REMARK 470 LYS A 200 CG CD CE NZ REMARK 470 GLU A 274 CD OE1 OE2 REMARK 470 GLU A 288 CD OE1 OE2 REMARK 470 LYS A 313 CG CD CE NZ REMARK 470 ARG A 354 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 409 CG CD OE1 OE2 REMARK 470 LYS A 414 CD CE NZ REMARK 470 LYS A 432 CE NZ REMARK 470 HIS A 448 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 466 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 122 62.24 -155.21 REMARK 500 ALA A 168 -82.85 -82.09 REMARK 500 ASN A 420 -10.59 -141.72 REMARK 500 HIS A 448 -50.65 77.56 REMARK 500 SER A 462 -101.96 -125.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PGE A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC101507 RELATED DB: TARGETTRACK DBREF 4EXK A 0 366 UNP P0AEX9 MALE_ECOLI 26 392 DBREF 4EXK A 370 473 UNP D0ZI82 D0ZI82_SALT1 173 276 SEQADV 4EXK SER A -3 UNP P0AEX9 EXPRESSION TAG SEQADV 4EXK ASN A -2 UNP P0AEX9 EXPRESSION TAG SEQADV 4EXK ALA A -1 UNP P0AEX9 EXPRESSION TAG SEQADV 4EXK ALA A 82 UNP P0AEX9 ASP 108 ENGINEERED MUTATION SEQADV 4EXK ALA A 83 UNP P0AEX9 LYS 109 ENGINEERED MUTATION SEQADV 4EXK ALA A 172 UNP P0AEX9 GLU 198 ENGINEERED MUTATION SEQADV 4EXK ALA A 173 UNP P0AEX9 ASN 199 ENGINEERED MUTATION SEQADV 4EXK ALA A 239 UNP P0AEX9 LYS 265 ENGINEERED MUTATION SEQADV 4EXK ALA A 359 UNP P0AEX9 GLU 385 ENGINEERED MUTATION SEQADV 4EXK ALA A 362 UNP P0AEX9 LYS 388 ENGINEERED MUTATION SEQADV 4EXK ALA A 363 UNP P0AEX9 ASP 389 ENGINEERED MUTATION SEQADV 4EXK ASN A 367 UNP D0ZI82 LINKER SEQADV 4EXK ALA A 368 UNP D0ZI82 LINKER SEQADV 4EXK ALA A 369 UNP D0ZI82 LINKER SEQADV 4EXK ALA A 370 UNP D0ZI82 SER 173 ENGINEERED MUTATION SEQADV 4EXK SER A 474 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK LEU A 475 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK SER A 476 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK SER A 477 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK VAL A 478 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK LYS A 479 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK ASN A 480 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK ASN A 481 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK ILE A 482 UNP D0ZI82 EXPRESSION TAG SEQADV 4EXK GLY A 483 UNP D0ZI82 EXPRESSION TAG SEQRES 1 A 487 SER ASN ALA ALA LYS ILE GLU GLU GLY LYS LEU VAL ILE SEQRES 2 A 487 TRP ILE ASN GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU SEQRES 3 A 487 VAL GLY LYS LYS PHE GLU LYS ASP THR GLY ILE LYS VAL SEQRES 4 A 487 THR VAL GLU HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO SEQRES 5 A 487 GLN VAL ALA ALA THR GLY ASP GLY PRO ASP ILE ILE PHE SEQRES 6 A 487 TRP ALA HIS ASP ARG PHE GLY GLY TYR ALA GLN SER GLY SEQRES 7 A 487 LEU LEU ALA GLU ILE THR PRO ALA ALA ALA PHE GLN ASP SEQRES 8 A 487 LYS LEU TYR PRO PHE THR TRP ASP ALA VAL ARG TYR ASN SEQRES 9 A 487 GLY LYS LEU ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SEQRES 10 A 487 SER LEU ILE TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO SEQRES 11 A 487 LYS THR TRP GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU SEQRES 12 A 487 LYS ALA LYS GLY LYS SER ALA LEU MET PHE ASN LEU GLN SEQRES 13 A 487 GLU PRO TYR PHE THR TRP PRO LEU ILE ALA ALA ASP GLY SEQRES 14 A 487 GLY TYR ALA PHE LYS TYR ALA ALA GLY LYS TYR ASP ILE SEQRES 15 A 487 LYS ASP VAL GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY SEQRES 16 A 487 LEU THR PHE LEU VAL ASP LEU ILE LYS ASN LYS HIS MET SEQRES 17 A 487 ASN ALA ASP THR ASP TYR SER ILE ALA GLU ALA ALA PHE SEQRES 18 A 487 ASN LYS GLY GLU THR ALA MET THR ILE ASN GLY PRO TRP SEQRES 19 A 487 ALA TRP SER ASN ILE ASP THR SER ALA VAL ASN TYR GLY SEQRES 20 A 487 VAL THR VAL LEU PRO THR PHE LYS GLY GLN PRO SER LYS SEQRES 21 A 487 PRO PHE VAL GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SEQRES 22 A 487 SER PRO ASN LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN SEQRES 23 A 487 TYR LEU LEU THR ASP GLU GLY LEU GLU ALA VAL ASN LYS SEQRES 24 A 487 ASP LYS PRO LEU GLY ALA VAL ALA LEU LYS SER TYR GLU SEQRES 25 A 487 GLU GLU LEU ALA LYS ASP PRO ARG ILE ALA ALA THR MET SEQRES 26 A 487 GLU ASN ALA GLN LYS GLY GLU ILE MET PRO ASN ILE PRO SEQRES 27 A 487 GLN MET SER ALA PHE TRP TYR ALA VAL ARG THR ALA VAL SEQRES 28 A 487 ILE ASN ALA ALA SER GLY ARG GLN THR VAL ASP ALA ALA SEQRES 29 A 487 LEU ALA ALA ALA GLN THR ASN ALA ALA ALA ASN THR PRO SEQRES 30 A 487 SER PRO ASP LEU THR VAL MET SER ILE ASP LYS SER VAL SEQRES 31 A 487 LEU SER PRO GLY GLU SER ALA THR ILE THR THR ILE VAL SEQRES 32 A 487 LYS ASP ILE ASP GLY ASN PRO VAL ASN GLU VAL HIS ILE SEQRES 33 A 487 ASN LYS THR VAL ALA ARG GLU ASN LEU LYS GLY LEU TRP SEQRES 34 A 487 ASP TYR GLY PRO LEU LYS LYS GLU ASN VAL PRO GLY LYS SEQRES 35 A 487 TYR THR GLN VAL ILE THR TYR ARG GLY HIS SER ASN GLU SEQRES 36 A 487 ARG ILE ASP ILE SER PHE LYS TYR ALA MET SER PHE THR SEQRES 37 A 487 LYS GLU ILE SER ILE ARG GLY ARG LEU SER LEU SER SER SEQRES 38 A 487 VAL LYS ASN ASN ILE GLY HET GLC B 1 12 HET GLC B 2 11 HET GLC B 3 11 HET GLC B 4 11 HET PGE A 502 7 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM PGE TRIETHYLENE GLYCOL HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 GLC 4(C6 H12 O6) FORMUL 3 PGE C6 H14 O4 FORMUL 4 HOH *492(H2 O) HELIX 1 1 GLY A 16 GLY A 32 1 17 HELIX 2 2 LYS A 42 ALA A 51 1 10 HELIX 3 3 ARG A 66 SER A 73 1 8 HELIX 4 4 ALA A 82 ASP A 87 1 6 HELIX 5 5 TYR A 90 VAL A 97 1 8 HELIX 6 6 GLU A 131 ALA A 141 1 11 HELIX 7 7 GLU A 153 ASP A 164 1 12 HELIX 8 8 ASN A 185 ASN A 201 1 17 HELIX 9 9 ASP A 209 LYS A 219 1 11 HELIX 10 10 GLY A 228 TRP A 230 5 3 HELIX 11 11 ALA A 231 SER A 238 1 8 HELIX 12 12 ASN A 272 TYR A 283 1 12 HELIX 13 13 THR A 286 LYS A 297 1 12 HELIX 14 14 LEU A 304 ALA A 312 1 9 HELIX 15 15 ASP A 314 GLY A 327 1 14 HELIX 16 16 GLN A 335 SER A 352 1 18 HELIX 17 17 THR A 356 ALA A 370 1 15 SHEET 1 A 6 LYS A 34 GLU A 38 0 SHEET 2 A 6 LYS A 6 TRP A 10 1 N ILE A 9 O GLU A 38 SHEET 3 A 6 ILE A 59 ALA A 63 1 O PHE A 61 N TRP A 10 SHEET 4 A 6 PHE A 258 ILE A 266 -1 O GLY A 265 N ILE A 60 SHEET 5 A 6 TYR A 106 GLU A 111 -1 N GLU A 111 O GLY A 260 SHEET 6 A 6 ALA A 301 VAL A 302 -1 O ALA A 301 N VAL A 110 SHEET 1 B 5 LYS A 34 GLU A 38 0 SHEET 2 B 5 LYS A 6 TRP A 10 1 N ILE A 9 O GLU A 38 SHEET 3 B 5 ILE A 59 ALA A 63 1 O PHE A 61 N TRP A 10 SHEET 4 B 5 PHE A 258 ILE A 266 -1 O GLY A 265 N ILE A 60 SHEET 5 B 5 GLU A 328 ILE A 329 1 O GLU A 328 N VAL A 259 SHEET 1 C 2 ARG A 98 TYR A 99 0 SHEET 2 C 2 LYS A 102 LEU A 103 -1 O LYS A 102 N TYR A 99 SHEET 1 D 4 SER A 145 LEU A 147 0 SHEET 2 D 4 THR A 222 ASN A 227 1 O ALA A 223 N SER A 145 SHEET 3 D 4 SER A 114 ASN A 118 -1 N ILE A 116 O THR A 225 SHEET 4 D 4 TYR A 242 THR A 245 -1 O THR A 245 N LEU A 115 SHEET 1 E 2 TYR A 167 ALA A 172 0 SHEET 2 E 2 LYS A 175 GLY A 182 -1 O LYS A 175 N ALA A 172 SHEET 1 F 4 VAL A 379 ILE A 382 0 SHEET 2 F 4 SER A 392 ILE A 398 -1 O ILE A 398 N VAL A 379 SHEET 3 F 4 LYS A 438 GLY A 447 -1 O ILE A 443 N ALA A 393 SHEET 4 F 4 LEU A 424 TYR A 427 -1 N LEU A 424 O ARG A 446 SHEET 1 G 4 VAL A 379 ILE A 382 0 SHEET 2 G 4 SER A 392 ILE A 398 -1 O ILE A 398 N VAL A 379 SHEET 3 G 4 LYS A 438 GLY A 447 -1 O ILE A 443 N ALA A 393 SHEET 4 G 4 LYS A 431 LYS A 432 -1 N LYS A 431 O THR A 440 SHEET 1 H 4 VAL A 386 LEU A 387 0 SHEET 2 H 4 PHE A 463 GLY A 471 1 O ARG A 470 N LEU A 387 SHEET 3 H 4 GLU A 451 TYR A 459 -1 N PHE A 457 O LYS A 465 SHEET 4 H 4 ILE A 412 ARG A 418 -1 N THR A 415 O SER A 456 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.41 LINK O4 GLC B 2 C1 GLC B 3 1555 1555 1.42 LINK O4 GLC B 3 C1 GLC B 4 1555 1555 1.42 CRYST1 64.079 64.079 180.912 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015606 0.009010 0.000000 0.00000 SCALE2 0.000000 0.018020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005528 0.00000