HEADER TRANSFERASE/DNA 02-MAY-12 4EZ9 TITLE BACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: BACILLUS FRAGMENT (ANALOGOUS TO E. COLI KLENOW FRAGMENT, COMPND 5 UNP RESIDUES 287-878); COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(2DT))-3'); COMPND 11 CHAIN: B, E; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: DNA PRIMER STRAND; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*GP*TP*CP*AP*GP*G)-3'); COMPND 16 CHAIN: C, F; COMPND 17 ENGINEERED: YES; COMPND 18 OTHER_DETAILS: DNA TEMPLATE STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS KAUSTOPHILUS; SOURCE 3 ORGANISM_TAXID: 235909; SOURCE 4 GENE: POLA, GK2730; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES KEYWDS DNA POLYMERASE I, PROTEIN-DNA COMPLEX, CLOSED FORM, TRANSFERASE-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.WANG,L.S.BEESE REVDAT 3 13-SEP-23 4EZ9 1 REMARK SEQADV LINK REVDAT 2 04-FEB-15 4EZ9 1 REMARK REVDAT 1 24-JUL-13 4EZ9 0 JRNL AUTH W.WANG,H.W.HELLINGA,L.S.BEESE JRNL TITL STRUCTURES OF A HIGH-FIDELITY DNA POLYMERASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.WANG,H.W.HELLINGA,L.S.BEESE REMARK 1 TITL STRUCTURAL EVIDENCE FOR THE RARE TAUTOMER HYPOTHESIS OF REMARK 1 TITL 2 SPONTANEOUS MUTAGENESIS. REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 108 17644 2011 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 22006298 REMARK 1 DOI 10.1073/PNAS.1114496108 REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1026 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.2 REMARK 3 NUMBER OF REFLECTIONS : 161679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.550 REMARK 3 FREE R VALUE TEST SET COUNT : 7358 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.1402 - 5.0932 0.92 5821 304 0.1961 0.1964 REMARK 3 2 5.0932 - 4.0436 0.98 5944 309 0.1390 0.1627 REMARK 3 3 4.0436 - 3.5327 0.97 5855 299 0.1645 0.1866 REMARK 3 4 3.5327 - 3.2098 0.98 5875 312 0.1611 0.1731 REMARK 3 5 3.2098 - 2.9798 0.99 5943 292 0.1721 0.1906 REMARK 3 6 2.9798 - 2.8042 0.98 5873 278 0.1698 0.1978 REMARK 3 7 2.8042 - 2.6637 0.98 5880 256 0.1707 0.1835 REMARK 3 8 2.6637 - 2.5478 0.98 5896 251 0.1633 0.1732 REMARK 3 9 2.5478 - 2.4497 0.98 5886 245 0.1572 0.1683 REMARK 3 10 2.4497 - 2.3652 0.98 5877 234 0.1573 0.1935 REMARK 3 11 2.3652 - 2.2913 0.96 5775 224 0.1565 0.1833 REMARK 3 12 2.2913 - 2.2258 0.81 1107 39 0.1737 0.2276 REMARK 3 13 2.2258 - 2.1672 0.89 5270 262 0.1688 0.2104 REMARK 3 14 2.1672 - 2.1143 0.98 5829 228 0.1618 0.1881 REMARK 3 15 2.1143 - 2.0662 0.98 5854 233 0.1623 0.1877 REMARK 3 16 2.0662 - 2.0223 0.97 5796 211 0.1638 0.1843 REMARK 3 17 2.0223 - 1.9818 0.96 5762 219 0.1705 0.1902 REMARK 3 18 1.9818 - 1.9444 0.85 5003 263 0.1812 0.2226 REMARK 3 19 1.9444 - 1.9097 0.19 8 1 0.1339 0.1035 REMARK 3 20 1.9097 - 1.8773 0.77 2181 115 0.1780 0.2301 REMARK 3 21 1.8773 - 1.8470 0.89 5241 276 0.1727 0.2233 REMARK 3 22 1.8470 - 1.8186 0.92 5415 285 0.1767 0.2061 REMARK 3 23 1.8186 - 1.7919 0.92 5449 286 0.1761 0.2160 REMARK 3 24 1.7919 - 1.7666 0.92 5394 284 0.1780 0.2206 REMARK 3 25 1.7666 - 1.7428 0.91 5300 279 0.1829 0.2106 REMARK 3 26 1.7428 - 1.7201 0.91 5349 282 0.1897 0.2350 REMARK 3 27 1.7201 - 1.6986 0.90 5270 277 0.1992 0.2502 REMARK 3 28 1.6986 - 1.6782 0.89 5200 274 0.2031 0.2440 REMARK 3 29 1.6782 - 1.6586 0.88 5144 271 0.2101 0.2591 REMARK 3 30 1.6586 - 1.6400 0.86 5124 269 0.2138 0.2329 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 10478 REMARK 3 ANGLE : 1.348 14360 REMARK 3 CHIRALITY : 0.077 1613 REMARK 3 PLANARITY : 0.007 1716 REMARK 3 DIHEDRAL : 15.327 4058 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 298:409) REMARK 3 ORIGIN FOR THE GROUP (A): 119.9829 -59.5602 25.4924 REMARK 3 T TENSOR REMARK 3 T11: 0.4090 T22: 0.2248 REMARK 3 T33: 0.2782 T12: 0.0537 REMARK 3 T13: 0.1068 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 1.3988 L22: 2.3232 REMARK 3 L33: 1.4717 L12: 0.6739 REMARK 3 L13: -0.1981 L23: -0.1532 REMARK 3 S TENSOR REMARK 3 S11: -0.1416 S12: 0.2101 S13: -0.3923 REMARK 3 S21: -0.4192 S22: 0.0706 S23: -0.2508 REMARK 3 S31: 0.3611 S32: 0.0516 S33: 0.0796 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 410:676) REMARK 3 ORIGIN FOR THE GROUP (A): 115.7149 -35.3449 39.9055 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.1688 REMARK 3 T33: 0.1269 T12: -0.0474 REMARK 3 T13: -0.0205 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 0.7110 L22: 1.4669 REMARK 3 L33: 1.4911 L12: -0.3310 REMARK 3 L13: -0.2844 L23: 0.2424 REMARK 3 S TENSOR REMARK 3 S11: -0.0447 S12: -0.0053 S13: 0.0035 REMARK 3 S21: -0.0082 S22: 0.0019 S23: -0.0175 REMARK 3 S31: -0.0197 S32: 0.2174 S33: 0.0522 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 677:743) REMARK 3 ORIGIN FOR THE GROUP (A): 129.8458 -9.3681 40.2717 REMARK 3 T TENSOR REMARK 3 T11: 0.6209 T22: 0.7159 REMARK 3 T33: 0.5099 T12: 0.0211 REMARK 3 T13: 0.0033 T23: -0.1785 REMARK 3 L TENSOR REMARK 3 L11: 5.3872 L22: 2.7637 REMARK 3 L33: 2.3732 L12: 0.1957 REMARK 3 L13: -0.0472 L23: 0.3355 REMARK 3 S TENSOR REMARK 3 S11: -0.2120 S12: -1.5491 S13: 0.4426 REMARK 3 S21: 0.0129 S22: 0.3421 S23: -0.7467 REMARK 3 S31: -1.0845 S32: 0.4324 S33: -0.1186 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 744:875) REMARK 3 ORIGIN FOR THE GROUP (A): 132.0972 -32.5729 34.6155 REMARK 3 T TENSOR REMARK 3 T11: 0.1832 T22: 0.4531 REMARK 3 T33: 0.2544 T12: -0.0497 REMARK 3 T13: 0.0138 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.9350 L22: 1.1785 REMARK 3 L33: 2.7171 L12: 0.3875 REMARK 3 L13: -0.6597 L23: -0.0743 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: -0.1853 S13: 0.0333 REMARK 3 S21: -0.0247 S22: -0.1042 S23: -0.4265 REMARK 3 S31: -0.1097 S32: 0.8690 S33: 0.0985 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 298:604) REMARK 3 ORIGIN FOR THE GROUP (A): 131.2374 -35.2537 -19.0391 REMARK 3 T TENSOR REMARK 3 T11: 0.0923 T22: 0.1035 REMARK 3 T33: 0.0909 T12: -0.0038 REMARK 3 T13: 0.0168 T23: -0.0295 REMARK 3 L TENSOR REMARK 3 L11: 0.4080 L22: 0.9722 REMARK 3 L33: 0.6967 L12: -0.0649 REMARK 3 L13: 0.1128 L23: -0.1929 REMARK 3 S TENSOR REMARK 3 S11: 0.0184 S12: 0.0655 S13: -0.0001 REMARK 3 S21: -0.1549 S22: 0.0179 S23: -0.0413 REMARK 3 S31: 0.0262 S32: 0.0495 S33: -0.0370 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 605:876) REMARK 3 ORIGIN FOR THE GROUP (A): 118.4814 -18.0668 -8.5447 REMARK 3 T TENSOR REMARK 3 T11: 0.0653 T22: 0.1134 REMARK 3 T33: 0.1243 T12: 0.0177 REMARK 3 T13: 0.0080 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 0.9336 L22: 1.1148 REMARK 3 L33: 1.1006 L12: 0.0238 REMARK 3 L13: -0.1062 L23: 0.4768 REMARK 3 S TENSOR REMARK 3 S11: 0.0484 S12: 0.1139 S13: 0.1541 REMARK 3 S21: -0.0817 S22: -0.0491 S23: 0.0889 REMARK 3 S31: -0.1228 S32: -0.0887 S33: 0.0022 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 21:29) REMARK 3 ORIGIN FOR THE GROUP (A): 108.8756 -28.0144 40.0605 REMARK 3 T TENSOR REMARK 3 T11: 0.3086 T22: 0.1259 REMARK 3 T33: 0.2121 T12: -0.0662 REMARK 3 T13: -0.0763 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 4.1885 L22: 0.9643 REMARK 3 L33: 2.6795 L12: -0.5219 REMARK 3 L13: -0.2607 L23: -0.0594 REMARK 3 S TENSOR REMARK 3 S11: -0.1637 S12: 0.0313 S13: -0.1130 REMARK 3 S21: -0.5566 S22: 0.0824 S23: 0.2612 REMARK 3 S31: -0.1172 S32: -0.1462 S33: 0.0925 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 2:12) REMARK 3 ORIGIN FOR THE GROUP (A): 109.9828 -27.9524 37.8676 REMARK 3 T TENSOR REMARK 3 T11: 0.2231 T22: 0.1558 REMARK 3 T33: 0.1821 T12: 0.0028 REMARK 3 T13: -0.0301 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 2.2656 L22: 2.2435 REMARK 3 L33: 2.0697 L12: 0.2311 REMARK 3 L13: -0.5468 L23: 0.1013 REMARK 3 S TENSOR REMARK 3 S11: 0.0913 S12: 0.0877 S13: 0.2832 REMARK 3 S21: -0.2753 S22: -0.0629 S23: 0.3753 REMARK 3 S31: -0.3321 S32: -0.0108 S33: -0.0028 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'E' AND (RESSEQ 21:29) REMARK 3 ORIGIN FOR THE GROUP (A): 129.9347 -18.5852 -26.9085 REMARK 3 T TENSOR REMARK 3 T11: 0.1625 T22: 0.1058 REMARK 3 T33: 0.2315 T12: 0.0241 REMARK 3 T13: 0.0372 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 2.3003 L22: 0.8458 REMARK 3 L33: 4.3319 L12: 0.8812 REMARK 3 L13: -0.8369 L23: -0.9249 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: 0.3019 S13: -0.0198 REMARK 3 S21: -0.0602 S22: 0.0666 S23: -0.3433 REMARK 3 S31: 0.0561 S32: 0.0203 S33: -0.0586 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'F' AND (RESSEQ 1:12) REMARK 3 ORIGIN FOR THE GROUP (A): 131.4037 -17.4703 -23.8326 REMARK 3 T TENSOR REMARK 3 T11: 0.1656 T22: 0.1671 REMARK 3 T33: 0.1803 T12: -0.0294 REMARK 3 T13: 0.0932 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.6608 L22: 0.8594 REMARK 3 L33: 1.7935 L12: -0.4925 REMARK 3 L13: -0.2714 L23: -0.0407 REMARK 3 S TENSOR REMARK 3 S11: 0.1060 S12: 0.1651 S13: 0.1443 REMARK 3 S21: -0.4225 S22: 0.1413 S23: -0.3992 REMARK 3 S31: -0.2701 S32: 0.2394 S33: -0.2133 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EZ9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072255. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-10 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 12.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 171000 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.850 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2HVI WITH INSERTION SITE BASE PAIR, REMARK 200 METAL IONS, AND PROTEIN RESIDUES 681-721 DELETED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 48%-53% SATURATED AMMONIUM SULFATE, REMARK 280 2.5% MPD, 10MM MGSO4, 100MM MES, PH 5.8, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.96000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.74500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.48000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.74500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.96000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.48000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 285 REMARK 465 GLU A 286 REMARK 465 SER A 287 REMARK 465 PRO A 288 REMARK 465 SER A 289 REMARK 465 SER A 290 REMARK 465 GLU A 291 REMARK 465 GLU A 292 REMARK 465 GLU A 293 REMARK 465 LYS A 294 REMARK 465 PRO A 295 REMARK 465 LEU A 296 REMARK 465 ALA A 297 REMARK 465 LYS A 876 REMARK 465 MET D 285 REMARK 465 GLU D 286 REMARK 465 SER D 287 REMARK 465 PRO D 288 REMARK 465 SER D 289 REMARK 465 SER D 290 REMARK 465 GLU D 291 REMARK 465 GLU D 292 REMARK 465 GLU D 293 REMARK 465 LYS D 294 REMARK 465 PRO D 295 REMARK 465 LEU D 296 REMARK 465 ALA D 297 REMARK 465 DC C 0 REMARK 465 DA C 1 REMARK 465 DC F 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS D 298 CG CD CE NZ REMARK 470 DA F 1 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1434 O HOH A 1435 1.83 REMARK 500 O HOH D 1674 O HOH D 1675 1.87 REMARK 500 O HOH A 1329 O HOH A 1342 1.88 REMARK 500 O HOH D 1490 O HOH D 1607 1.89 REMARK 500 OD1 ASN D 812 O HOH D 1422 1.94 REMARK 500 O HOH A 1355 O HOH A 1358 1.96 REMARK 500 O HOH D 1554 O HOH D 1594 1.97 REMARK 500 O HOH D 1208 O HOH D 1342 2.02 REMARK 500 OD2 ASP D 471 O HOH D 1475 2.02 REMARK 500 O HOH A 1375 O HOH A 1376 2.03 REMARK 500 O HOH A 1265 O HOH A 1305 2.04 REMARK 500 O HOH D 1670 O HOH D 1673 2.05 REMARK 500 O HOH A 1344 O HOH A 1392 2.06 REMARK 500 OD1 ASP D 408 O HOH D 1552 2.07 REMARK 500 O HOH A 1144 O HOH A 1277 2.07 REMARK 500 O HOH D 1678 O HOH D 1683 2.07 REMARK 500 O HOH A 1066 O HOH A 1294 2.07 REMARK 500 O HOH D 1374 O HOH D 1380 2.07 REMARK 500 O HOH A 1138 O HOH A 1224 2.08 REMARK 500 O HOH A 1117 O HOH A 1334 2.08 REMARK 500 NH1 ARG D 459 O HOH D 1617 2.08 REMARK 500 O HOH D 1685 O HOH D 1693 2.08 REMARK 500 O HOH D 1401 O HOH D 1450 2.09 REMARK 500 O HOH E 123 O HOH E 125 2.09 REMARK 500 NH1 ARG D 629 O HOH D 1218 2.11 REMARK 500 NH2 ARG D 472 O HOH D 1167 2.12 REMARK 500 O HOH D 1465 O HOH D 1522 2.12 REMARK 500 O HOH A 1368 O HOH A 1373 2.12 REMARK 500 O HOH D 1175 O HOH D 1368 2.13 REMARK 500 O HOH E 117 O HOH E 125 2.13 REMARK 500 O HOH C 166 O HOH C 167 2.13 REMARK 500 O HOH D 1307 O HOH D 1437 2.13 REMARK 500 OD1 ASN A 607 O HOH A 1330 2.13 REMARK 500 OG1 THR D 513 O HOH D 1493 2.14 REMARK 500 O HOH C 112 O HOH C 133 2.15 REMARK 500 O HOH D 1302 O HOH D 1530 2.15 REMARK 500 O HOH A 1228 O HOH A 1299 2.16 REMARK 500 O HOH A 1362 O HOH A 1367 2.16 REMARK 500 O HOH D 1664 O HOH D 1667 2.16 REMARK 500 O HOH D 1250 O HOH D 1584 2.16 REMARK 500 NH2 ARG D 459 O HOH D 1657 2.19 REMARK 500 O HOH D 1380 O HOH D 1585 2.19 REMARK 500 O HOH A 1118 O HOH A 1428 2.19 REMARK 500 O HOH D 1237 O HOH D 1286 2.19 REMARK 500 O HOH A 1159 O HOH A 1330 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 1649 O HOH D 1659 3854 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC B 22 O3' DC B 22 C3' -0.039 REMARK 500 DC C 9 O3' DC C 9 C3' -0.037 REMARK 500 DG F 7 C5 DG F 7 N7 0.036 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 634 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG D 634 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG D 859 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC B 21 O4' - C1' - C2' ANGL. DEV. = 3.5 DEGREES REMARK 500 DT B 23 O4' - C1' - N1 ANGL. DEV. = -7.0 DEGREES REMARK 500 DT B 23 N3 - C4 - O4 ANGL. DEV. = 4.2 DEGREES REMARK 500 DA B 25 C5' - C4' - C3' ANGL. DEV. = 9.5 DEGREES REMARK 500 DC B 26 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT C 2 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 DT C 3 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG C 5 O4' - C4' - C3' ANGL. DEV. = -2.5 DEGREES REMARK 500 DT C 8 O4' - C1' - N1 ANGL. DEV. = -5.8 DEGREES REMARK 500 DG C 12 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT E 23 O4' - C1' - N1 ANGL. DEV. = -6.7 DEGREES REMARK 500 DA E 25 O5' - P - OP2 ANGL. DEV. = -7.1 DEGREES REMARK 500 DA E 25 O4' - C4' - C3' ANGL. DEV. = -2.5 DEGREES REMARK 500 DA E 25 C5' - C4' - C3' ANGL. DEV. = 11.1 DEGREES REMARK 500 DA E 25 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC E 26 O4' - C4' - C3' ANGL. DEV. = 4.2 DEGREES REMARK 500 DC E 26 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DC E 28 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT F 2 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DT F 3 O4' - C1' - C2' ANGL. DEV. = 3.2 DEGREES REMARK 500 DA F 4 O4' - C1' - C2' ANGL. DEV. = 3.2 DEGREES REMARK 500 DT F 8 O4' - C1' - N1 ANGL. DEV. = -6.9 DEGREES REMARK 500 DA F 10 O4' - C1' - N9 ANGL. DEV. = -4.6 DEGREES REMARK 500 DG F 12 O5' - C5' - C4' ANGL. DEV. = -6.1 DEGREES REMARK 500 DG F 12 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 312 40.01 -108.67 REMARK 500 ASP A 372 64.97 60.82 REMARK 500 ASP A 402 100.58 -168.58 REMARK 500 ASP A 408 13.83 -141.19 REMARK 500 ALA A 421 37.25 -85.36 REMARK 500 GLN A 524 147.84 -171.35 REMARK 500 ILE A 588 -69.29 -105.58 REMARK 500 LEU A 610 -52.46 -123.35 REMARK 500 ILE A 628 -30.62 -147.47 REMARK 500 GLN A 691 66.92 62.20 REMARK 500 HIS A 768 19.14 82.21 REMARK 500 HIS A 829 -51.60 72.95 REMARK 500 ASP D 372 61.14 62.44 REMARK 500 ASP D 402 93.45 -167.55 REMARK 500 ASP D 408 10.47 -140.69 REMARK 500 ALA D 421 46.82 -90.04 REMARK 500 GLN D 524 146.37 -177.00 REMARK 500 ILE D 588 -68.89 -106.86 REMARK 500 LEU D 610 -50.02 -123.44 REMARK 500 ILE D 628 -25.59 -152.01 REMARK 500 HIS D 768 21.02 83.09 REMARK 500 HIS D 829 -52.75 71.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D3T D 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 902 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4EZ6 RELATED DB: PDB REMARK 900 RELATED ID: 4F2S RELATED DB: PDB REMARK 900 RELATED ID: 4F4K RELATED DB: PDB REMARK 900 RELATED ID: 4F2R RELATED DB: PDB REMARK 900 RELATED ID: 4F3O RELATED DB: PDB REMARK 900 RELATED ID: 4F8R RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE PROTEIN WAS ISOLATED FROM A STRAIN OF REMARK 999 GEOBACILLUS SPECIES WHOSE SEQUENCE IS NOT AVAILABLE IN THE UNIPROT REMARK 999 DATABASE. IT DIFFERS FROM UNP Q5KWC1 BY THIS SINGLE RESIDUE DBREF 4EZ9 A 285 876 UNP Q5KWC1 Q5KWC1_GEOKA 287 878 DBREF 4EZ9 D 285 876 UNP Q5KWC1 Q5KWC1_GEOKA 287 878 DBREF 4EZ9 B 21 29 PDB 4EZ9 4EZ9 21 29 DBREF 4EZ9 E 21 29 PDB 4EZ9 4EZ9 21 29 DBREF 4EZ9 C 0 12 PDB 4EZ9 4EZ9 0 12 DBREF 4EZ9 F 0 12 PDB 4EZ9 4EZ9 0 12 SEQADV 4EZ9 ALA A 598 UNP Q5KWC1 ASP 600 ENGINEERED MUTATION SEQADV 4EZ9 TYR A 710 UNP Q5KWC1 PHE 712 ENGINEERED MUTATION SEQADV 4EZ9 HIS A 823 UNP Q5KWC1 ARG 825 SEE REMARK 999 SEQADV 4EZ9 ALA D 598 UNP Q5KWC1 ASP 600 ENGINEERED MUTATION SEQADV 4EZ9 TYR D 710 UNP Q5KWC1 PHE 712 ENGINEERED MUTATION SEQADV 4EZ9 HIS D 823 UNP Q5KWC1 ARG 825 SEE REMARK 999 SEQRES 1 A 592 MET GLU SER PRO SER SER GLU GLU GLU LYS PRO LEU ALA SEQRES 2 A 592 LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU GLU SEQRES 3 A 592 MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL VAL SEQRES 4 A 592 GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE ALA SEQRES 5 A 592 VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO GLU SEQRES 6 A 592 THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU GLY SEQRES 7 A 592 ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS ARG SEQRES 8 A 592 ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU CYS SEQRES 9 A 592 GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU LEU SEQRES 10 A 592 ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA ALA SEQRES 11 A 592 LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU ALA SEQRES 12 A 592 VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP GLU SEQRES 13 A 592 PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA ALA SEQRES 14 A 592 ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU ARG SEQRES 15 A 592 ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU GLN SEQRES 16 A 592 PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA GLY SEQRES 17 A 592 VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY LYS SEQRES 18 A 592 GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG ILE SEQRES 19 A 592 TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER PRO SEQRES 20 A 592 LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN LEU SEQRES 21 A 592 PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR SER SEQRES 22 A 592 ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU ILE SEQRES 23 A 592 VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS LEU SEQRES 24 A 592 GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL ARG SEQRES 25 A 592 PRO ALA THR LYS LYS VAL HIS THR ILE PHE ASN GLN ALA SEQRES 26 A 592 LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO ASN SEQRES 27 A 592 LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG LYS SEQRES 28 A 592 ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP LEU SEQRES 29 A 592 ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG VAL SEQRES 30 A 592 LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU ALA SEQRES 31 A 592 PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA MET SEQRES 32 A 592 ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO ASN SEQRES 33 A 592 MET ARG ARG GLN ALA LYS ALA VAL ASN TYR GLY ILE VAL SEQRES 34 A 592 TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU ASN SEQRES 35 A 592 ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG TYR SEQRES 36 A 592 PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU ASN SEQRES 37 A 592 ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR THR SEQRES 38 A 592 LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR SER SEQRES 39 A 592 ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET ALA SEQRES 40 A 592 MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE ILE SEQRES 41 A 592 LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS GLU SEQRES 42 A 592 GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS ASP SEQRES 43 A 592 GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU ARG SEQRES 44 A 592 LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA VAL SEQRES 45 A 592 THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR GLY SEQRES 46 A 592 SER THR TRP TYR ASP ALA LYS SEQRES 1 D 592 MET GLU SER PRO SER SER GLU GLU GLU LYS PRO LEU ALA SEQRES 2 D 592 LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU GLU SEQRES 3 D 592 MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL VAL SEQRES 4 D 592 GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE ALA SEQRES 5 D 592 VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO GLU SEQRES 6 D 592 THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU GLY SEQRES 7 D 592 ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS ARG SEQRES 8 D 592 ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU CYS SEQRES 9 D 592 GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU LEU SEQRES 10 D 592 ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA ALA SEQRES 11 D 592 LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU ALA SEQRES 12 D 592 VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP GLU SEQRES 13 D 592 PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA ALA SEQRES 14 D 592 ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU ARG SEQRES 15 D 592 ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU GLN SEQRES 16 D 592 PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA GLY SEQRES 17 D 592 VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY LYS SEQRES 18 D 592 GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG ILE SEQRES 19 D 592 TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER PRO SEQRES 20 D 592 LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN LEU SEQRES 21 D 592 PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR SER SEQRES 22 D 592 ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU ILE SEQRES 23 D 592 VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS LEU SEQRES 24 D 592 GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL ARG SEQRES 25 D 592 PRO ALA THR LYS LYS VAL HIS THR ILE PHE ASN GLN ALA SEQRES 26 D 592 LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO ASN SEQRES 27 D 592 LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG LYS SEQRES 28 D 592 ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP LEU SEQRES 29 D 592 ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG VAL SEQRES 30 D 592 LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU ALA SEQRES 31 D 592 PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA MET SEQRES 32 D 592 ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO ASN SEQRES 33 D 592 MET ARG ARG GLN ALA LYS ALA VAL ASN TYR GLY ILE VAL SEQRES 34 D 592 TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU ASN SEQRES 35 D 592 ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG TYR SEQRES 36 D 592 PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU ASN SEQRES 37 D 592 ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR THR SEQRES 38 D 592 LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR SER SEQRES 39 D 592 ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET ALA SEQRES 40 D 592 MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE ILE SEQRES 41 D 592 LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS GLU SEQRES 42 D 592 GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS ASP SEQRES 43 D 592 GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU ARG SEQRES 44 D 592 LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA VAL SEQRES 45 D 592 THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR GLY SEQRES 46 D 592 SER THR TRP TYR ASP ALA LYS SEQRES 1 B 9 DC DC DT DG DA DC DT DC 2DT SEQRES 1 C 13 DC DA DT DT DA DG DA DG DT DC DA DG DG SEQRES 1 E 9 DC DC DT DG DA DC DT DC 2DT SEQRES 1 F 13 DC DA DT DT DA DG DA DG DT DC DA DG DG MODRES 4EZ9 2DT B 29 DT 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE MODRES 4EZ9 2DT E 29 DT 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE HET 2DT B 29 30 HET 2DT E 29 30 HET SO4 A 901 5 HET MPD A 902 22 HET D3T D 901 28 HET SO4 D 902 5 HETNAM 2DT 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE HETNAM SO4 SULFATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM D3T 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE HETSYN 2DT 2',3'-DIDEOXYTHYMIDINE-5'-MONOPHOSPHATE FORMUL 3 2DT 2(C10 H15 N2 O7 P) FORMUL 7 SO4 2(O4 S 2-) FORMUL 8 MPD C6 H14 O2 FORMUL 9 D3T C10 H17 N2 O13 P3 FORMUL 11 HOH *1363(H2 O) HELIX 1 1 THR A 308 LEU A 312 5 5 HELIX 2 2 ARG A 347 LEU A 352 1 6 HELIX 3 3 ASP A 354 GLY A 362 1 9 HELIX 4 4 ASP A 372 LYS A 383 1 12 HELIX 5 5 LEU A 394 ASP A 402 1 9 HELIX 6 6 PRO A 403 GLY A 406 5 4 HELIX 7 7 ASP A 409 MET A 416 1 8 HELIX 8 8 PRO A 424 GLY A 430 1 7 HELIX 9 9 LYS A 431 ARG A 435 5 5 HELIX 10 10 ASP A 439 ASN A 468 1 30 HELIX 11 11 GLN A 470 LEU A 477 1 8 HELIX 12 12 LEU A 477 GLY A 492 1 16 HELIX 13 13 ASP A 496 GLY A 523 1 28 HELIX 14 14 SER A 530 GLU A 540 1 11 HELIX 15 15 SER A 557 LEU A 564 1 8 HELIX 16 16 GLU A 569 TYR A 587 1 19 HELIX 17 17 ILE A 588 VAL A 595 1 8 HELIX 18 18 LEU A 630 LYS A 635 1 6 HELIX 19 19 ILE A 636 GLN A 638 5 3 HELIX 20 20 GLN A 656 GLU A 667 1 12 HELIX 21 21 ASP A 668 ARG A 677 1 10 HELIX 22 22 ASP A 680 PHE A 690 1 11 HELIX 23 23 SER A 693 VAL A 697 5 5 HELIX 24 24 THR A 698 TYR A 714 1 17 HELIX 25 25 SER A 717 ASN A 726 1 10 HELIX 26 26 SER A 728 PHE A 743 1 16 HELIX 27 27 PHE A 743 GLY A 761 1 19 HELIX 28 28 ASN A 780 GLU A 818 1 39 HELIX 29 29 GLU A 840 ALA A 855 1 16 HELIX 30 30 THR D 308 LEU D 312 5 5 HELIX 31 31 ARG D 347 LEU D 352 1 6 HELIX 32 32 ASP D 354 ASP D 363 1 10 HELIX 33 33 ASP D 372 LYS D 383 1 12 HELIX 34 34 LEU D 394 ASP D 402 1 9 HELIX 35 35 PRO D 403 GLY D 406 5 4 HELIX 36 36 ASP D 409 MET D 416 1 8 HELIX 37 37 PRO D 424 GLY D 430 1 7 HELIX 38 38 LYS D 431 ARG D 435 5 5 HELIX 39 39 ASP D 439 ASN D 468 1 30 HELIX 40 40 GLN D 470 LEU D 477 1 8 HELIX 41 41 LEU D 477 GLY D 492 1 16 HELIX 42 42 ASP D 496 GLY D 523 1 28 HELIX 43 43 SER D 530 GLU D 540 1 11 HELIX 44 44 SER D 557 LEU D 564 1 8 HELIX 45 45 GLU D 569 ILE D 588 1 20 HELIX 46 46 ILE D 588 VAL D 595 1 8 HELIX 47 47 LEU D 630 LYS D 635 1 6 HELIX 48 48 ILE D 636 GLN D 638 5 3 HELIX 49 49 GLN D 656 GLU D 667 1 12 HELIX 50 50 ASP D 668 ARG D 677 1 10 HELIX 51 51 ASP D 680 PHE D 690 1 11 HELIX 52 52 SER D 693 VAL D 697 5 5 HELIX 53 53 THR D 698 TYR D 714 1 17 HELIX 54 54 SER D 717 ASN D 726 1 10 HELIX 55 55 SER D 728 PHE D 743 1 16 HELIX 56 56 PHE D 743 GLY D 761 1 19 HELIX 57 57 PRO D 774 SER D 778 5 5 HELIX 58 58 ASN D 780 GLU D 818 1 39 HELIX 59 59 GLU D 840 GLN D 854 1 15 HELIX 60 60 TRP D 872 LYS D 876 5 5 SHEET 1 A 6 THR A 302 LEU A 303 0 SHEET 2 A 6 GLY A 342 LEU A 346 1 O ARG A 343 N THR A 302 SHEET 3 A 6 GLY A 334 ASN A 339 -1 N VAL A 337 O PHE A 344 SHEET 4 A 6 LYS A 315 GLU A 321 -1 N ALA A 317 O VAL A 338 SHEET 5 A 6 LYS A 367 MET A 370 1 O SER A 369 N LEU A 318 SHEET 6 A 6 VAL A 390 ASP A 393 1 O PHE A 392 N MET A 370 SHEET 1 B 3 LYS A 601 VAL A 602 0 SHEET 2 B 3 VAL A 493 VAL A 495 -1 N VAL A 493 O VAL A 602 SHEET 3 B 3 PHE A 640 VAL A 641 -1 O VAL A 641 N LYS A 494 SHEET 1 C 2 ILE A 605 ASN A 607 0 SHEET 2 C 2 SER A 617 THR A 619 -1 O THR A 619 N ILE A 605 SHEET 1 D 4 HIS A 823 GLN A 827 0 SHEET 2 D 4 GLU A 831 PRO A 837 -1 O ILE A 833 N LEU A 825 SHEET 3 D 4 TRP A 647 TYR A 654 -1 N PHE A 650 O LEU A 834 SHEET 4 D 4 VAL A 864 GLY A 869 -1 O GLY A 869 N ILE A 649 SHEET 1 E 2 TYR A 762 THR A 764 0 SHEET 2 E 2 ARG A 770 TYR A 772 -1 O ARG A 771 N VAL A 763 SHEET 1 F 6 THR D 302 LEU D 303 0 SHEET 2 F 6 GLY D 342 LEU D 346 1 O PHE D 345 N THR D 302 SHEET 3 F 6 GLY D 334 ASN D 339 -1 N ILE D 335 O LEU D 346 SHEET 4 F 6 LYS D 315 GLU D 321 -1 N ALA D 317 O VAL D 338 SHEET 5 F 6 LYS D 367 MET D 370 1 O SER D 369 N ALA D 316 SHEET 6 F 6 VAL D 390 ASP D 393 1 O PHE D 392 N MET D 370 SHEET 1 G 3 LYS D 601 VAL D 602 0 SHEET 2 G 3 VAL D 493 VAL D 495 -1 N VAL D 493 O VAL D 602 SHEET 3 G 3 PHE D 640 VAL D 641 -1 O VAL D 641 N LYS D 494 SHEET 1 H 2 LYS D 549 THR D 550 0 SHEET 2 H 2 GLY D 553 TYR D 554 -1 O GLY D 553 N THR D 550 SHEET 1 I 2 ILE D 605 ASN D 607 0 SHEET 2 I 2 SER D 617 THR D 619 -1 O THR D 619 N ILE D 605 SHEET 1 J 4 HIS D 823 GLN D 827 0 SHEET 2 J 4 GLU D 831 PRO D 837 -1 O ILE D 833 N LEU D 825 SHEET 3 J 4 TRP D 647 TYR D 654 -1 N PHE D 650 O LEU D 834 SHEET 4 J 4 VAL D 864 GLY D 869 -1 O HIS D 867 N ALA D 651 SHEET 1 K 2 TYR D 762 THR D 764 0 SHEET 2 K 2 ARG D 770 TYR D 772 -1 O ARG D 771 N VAL D 763 LINK O3' DC B 28 P 2DT B 29 1555 1555 1.62 LINK O3' DC E 28 P 2DT E 29 1555 1555 1.62 CISPEP 1 GLU A 620 PRO A 621 0 -0.34 CISPEP 2 GLU D 620 PRO D 621 0 0.35 SITE 1 AC1 6 ARG A 779 ASN A 780 HOH A1196 PRO D 424 SITE 2 AC1 6 HOH D1440 HOH D1607 SITE 1 AC2 4 HOH A1013 LEU D 352 LYS D 383 HOH D1062 SITE 1 AC3 17 GLN D 656 GLU D 658 HIS D 682 ARG D 702 SITE 2 AC3 17 LYS D 706 TYR D 710 HOH D1021 HOH D1043 SITE 3 AC3 17 HOH D1090 HOH D1130 HOH D1151 HOH D1396 SITE 4 AC3 17 HOH D1494 2DT E 29 HOH E 111 DT F 3 SITE 5 AC3 17 DA F 4 SITE 1 AC4 4 MET D 299 ALA D 300 ARG D 343 ARG D 677 CRYST1 93.920 108.960 149.490 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010647 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009178 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006689 0.00000