HEADER HYDROLASE/HYDROLASE INHIBITOR 08-MAY-12 4F2W TITLE CRYSTAL STRUCTURE OF 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE TITLE 2 NUCLEOSIDASE FROM SALMONELLA ENTERICA WITH METHYL-THIO-DADME- TITLE 3 IMMUCILLIN-A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MTA/SAH NUCLEOSIDASE, MTAN, 5'-METHYLTHIOADENOSINE COMPND 5 NUCLEOSIDASE, S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE; COMPND 6 EC: 3.2.2.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 CHOLERAESUIS STR. SCSA50; SOURCE 4 ORGANISM_TAXID: 904139; SOURCE 5 STRAIN: SCSA50; SOURCE 6 GENE: EMBL EFZ04802.1, MTNN, PFS, SCA50_0219, SCH_0207; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS L-METHIONINE BIOSYNTHETIC PROCESS FROM S-ADENOSYLMETHIONINE, L- KEYWDS 2 METHIONINE SALVAGE FROM METHYLTHIOADENOSINE, 5'- KEYWDS 3 METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE, KEYWDS 4 ADENOSYLHOMOCYSTEINE NUCLEOSIDASE ACTIVITY, METHYLTHIOADENOSINE KEYWDS 5 NUCLEOSIDASE ACTIVITY, ACTING ON GLYCOSYL BONDS, HYDROLASE-HYDROLASE KEYWDS 6 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.M.HAAPALAINEN,K.THOMAS,J.B.BONANNO,S.C.ALMO,V.L.SCHRAMM REVDAT 3 28-FEB-24 4F2W 1 REMARK SEQADV REVDAT 2 19-JUN-13 4F2W 1 JRNL REVDAT 1 01-MAY-13 4F2W 0 JRNL AUTH A.M.HAAPALAINEN,K.THOMAS,P.C.TYLER,G.B.EVANS,S.C.ALMO, JRNL AUTH 2 V.L.SCHRAMM JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE JRNL TITL 3 FROM SALMONELLA ENTERICA WITH METHYL-THIO-DADME-IMMUCILLIN-A JRNL REF STRUCTURE V. 21 963 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23685211 JRNL DOI 10.1016/J.STR.2013.04.009 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0025 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 34563 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1817 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2439 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 127 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3467 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 271 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : -0.48000 REMARK 3 B33 (A**2) : 0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.162 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.147 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.538 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3612 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3565 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4898 ; 1.452 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8189 ; 1.034 ; 3.006 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 480 ; 6.111 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;36.143 ;25.245 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 601 ;12.910 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;17.634 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 589 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4111 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 768 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4F2W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072386. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SAGITTAL FOCUSING MONOCHROMETER REMARK 200 AND VERTICAL FOCUSING MIRROR REMARK 200 OPTICS : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SAGITTAL FOCUSING MONOCHROMETER REMARK 200 AND VERTICAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36435 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 61.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.19600 REMARK 200 R SYM (I) : 0.19600 REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.34700 REMARK 200 R SYM FOR SHELL (I) : 0.34700 REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% 2-METHYL-2,4-PENTANEDIOL, 0.2M REMARK 280 SODIUM CHLORIDE, 0.1M TRIS, PH 7.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.70500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.55500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.27000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.55500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.70500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.27000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 232 REMARK 465 MET B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 GLY B -8 REMARK 465 GLY B -7 REMARK 465 HIS B 231 REMARK 465 GLY B 232 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 85 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 153 43.83 -142.66 REMARK 500 SER A 155 -146.21 57.72 REMARK 500 GLU A 172 -159.58 -151.49 REMARK 500 GLU A 174 -30.44 -139.91 REMARK 500 SER B 155 -143.24 52.59 REMARK 500 GLU B 172 -155.57 -154.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TDI A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TDI B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F1W RELATED DB: PDB REMARK 900 RELATED ID: 4F2P RELATED DB: PDB DBREF 4F2W A 1 232 UNP E8NLP5 E8NLP5_SALET 1 232 DBREF 4F2W B 1 232 UNP E8NLP5 E8NLP5_SALET 1 232 SEQADV 4F2W MET A -15 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS A -14 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS A -13 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS A -12 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS A -11 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS A -10 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS A -9 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W GLY A -8 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W GLY A -7 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W LEU A -6 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W VAL A -5 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W PRO A -4 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W ARG A -3 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W GLY A -2 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W SER A -1 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS A 0 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W MET B -15 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS B -14 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS B -13 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS B -12 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS B -11 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS B -10 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS B -9 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W GLY B -8 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W GLY B -7 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W LEU B -6 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W VAL B -5 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W PRO B -4 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W ARG B -3 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W GLY B -2 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W SER B -1 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2W HIS B 0 UNP E8NLP5 EXPRESSION TAG SEQRES 1 A 248 MET HIS HIS HIS HIS HIS HIS GLY GLY LEU VAL PRO ARG SEQRES 2 A 248 GLY SER HIS MET LYS ILE GLY ILE ILE GLY ALA MET GLU SEQRES 3 A 248 GLU GLU VAL THR LEU LEU ARG ASP LYS ILE ASP ASN ARG SEQRES 4 A 248 GLN THR ILE THR LEU GLY GLY CYS GLU ILE TYR THR GLY SEQRES 5 A 248 GLN LEU ASN GLY THR GLU VAL ALA LEU LEU LYS SER GLY SEQRES 6 A 248 ILE GLY LYS VAL ALA ALA ALA LEU GLY ALA THR LEU LEU SEQRES 7 A 248 LEU GLU HIS CYS LYS PRO ASP VAL ILE ILE ASN THR GLY SEQRES 8 A 248 SER ALA GLY GLY LEU ALA SER THR LEU LYS VAL GLY ASP SEQRES 9 A 248 ILE VAL VAL SER ASP GLU THR ARG TYR HIS ASP ALA ASP SEQRES 10 A 248 VAL THR ALA PHE GLY TYR GLU TYR GLY GLN LEU PRO GLY SEQRES 11 A 248 CYS PRO ALA GLY PHE LYS ALA ASP ASP LYS LEU ILE ALA SEQRES 12 A 248 ALA ALA GLU SER CYS ILE ARG GLU LEU ASN LEU ASN ALA SEQRES 13 A 248 VAL ARG GLY LEU ILE VAL SER GLY ASP ALA PHE ILE ASN SEQRES 14 A 248 GLY SER VAL GLY LEU ALA LYS ILE ARG HIS ASN PHE PRO SEQRES 15 A 248 ASP ALA VAL ALA VAL GLU MET GLU ALA THR ALA ILE ALA SEQRES 16 A 248 HIS VAL CYS HIS ASN PHE ASN VAL PRO PHE VAL VAL VAL SEQRES 17 A 248 ARG ALA ILE SER ASP VAL ALA ASP GLN GLN SER HIS LEU SEQRES 18 A 248 SER PHE ASP GLU PHE LEU ALA VAL ALA ALA LYS GLN SER SEQRES 19 A 248 THR LEU MET VAL GLU THR LEU VAL GLN LYS LEU ALA HIS SEQRES 20 A 248 GLY SEQRES 1 B 248 MET HIS HIS HIS HIS HIS HIS GLY GLY LEU VAL PRO ARG SEQRES 2 B 248 GLY SER HIS MET LYS ILE GLY ILE ILE GLY ALA MET GLU SEQRES 3 B 248 GLU GLU VAL THR LEU LEU ARG ASP LYS ILE ASP ASN ARG SEQRES 4 B 248 GLN THR ILE THR LEU GLY GLY CYS GLU ILE TYR THR GLY SEQRES 5 B 248 GLN LEU ASN GLY THR GLU VAL ALA LEU LEU LYS SER GLY SEQRES 6 B 248 ILE GLY LYS VAL ALA ALA ALA LEU GLY ALA THR LEU LEU SEQRES 7 B 248 LEU GLU HIS CYS LYS PRO ASP VAL ILE ILE ASN THR GLY SEQRES 8 B 248 SER ALA GLY GLY LEU ALA SER THR LEU LYS VAL GLY ASP SEQRES 9 B 248 ILE VAL VAL SER ASP GLU THR ARG TYR HIS ASP ALA ASP SEQRES 10 B 248 VAL THR ALA PHE GLY TYR GLU TYR GLY GLN LEU PRO GLY SEQRES 11 B 248 CYS PRO ALA GLY PHE LYS ALA ASP ASP LYS LEU ILE ALA SEQRES 12 B 248 ALA ALA GLU SER CYS ILE ARG GLU LEU ASN LEU ASN ALA SEQRES 13 B 248 VAL ARG GLY LEU ILE VAL SER GLY ASP ALA PHE ILE ASN SEQRES 14 B 248 GLY SER VAL GLY LEU ALA LYS ILE ARG HIS ASN PHE PRO SEQRES 15 B 248 ASP ALA VAL ALA VAL GLU MET GLU ALA THR ALA ILE ALA SEQRES 16 B 248 HIS VAL CYS HIS ASN PHE ASN VAL PRO PHE VAL VAL VAL SEQRES 17 B 248 ARG ALA ILE SER ASP VAL ALA ASP GLN GLN SER HIS LEU SEQRES 18 B 248 SER PHE ASP GLU PHE LEU ALA VAL ALA ALA LYS GLN SER SEQRES 19 B 248 THR LEU MET VAL GLU THR LEU VAL GLN LYS LEU ALA HIS SEQRES 20 B 248 GLY HET TDI A 301 20 HET EDO A 302 4 HET EDO A 303 4 HET EDO A 304 4 HET CL A 305 1 HET TDI B 301 20 HET EDO B 302 4 HET EDO B 303 4 HET EDO B 304 4 HET CL B 305 1 HETNAM TDI (3R,4S)-1-[(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL) HETNAM 2 TDI METHYL]-4-[(METHYLSULFANYL)METHYL]PYRROLIDIN-3-OL HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN TDI (3R,4S)-1-[9-DEAZAADENIN-9-YL)METHYL]-3-HYDROXY-4- HETSYN 2 TDI (METHYLTHIOMETHYL)PYRROLIDINE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 TDI 2(C13 H19 N5 O S) FORMUL 4 EDO 6(C2 H6 O2) FORMUL 7 CL 2(CL 1-) FORMUL 13 HOH *271(H2 O) HELIX 1 1 MET A 9 LYS A 19 1 11 HELIX 2 2 GLY A 51 LYS A 67 1 17 HELIX 3 3 VAL A 102 GLY A 106 5 5 HELIX 4 4 ASP A 122 ASN A 137 1 16 HELIX 5 5 GLY A 154 PHE A 165 1 12 HELIX 6 6 GLU A 174 PHE A 185 1 12 HELIX 7 7 GLN A 202 HIS A 231 1 30 HELIX 8 8 MET B 9 ILE B 20 1 12 HELIX 9 9 GLY B 51 LYS B 67 1 17 HELIX 10 10 VAL B 102 GLY B 106 5 5 HELIX 11 11 ASP B 122 LEU B 136 1 15 HELIX 12 12 GLY B 154 PHE B 165 1 12 HELIX 13 13 GLU B 174 PHE B 185 1 12 HELIX 14 14 GLN B 202 ALA B 230 1 29 SHEET 1 A11 ILE A 20 LEU A 28 0 SHEET 2 A11 CYS A 31 LEU A 38 -1 O GLN A 37 N ASP A 21 SHEET 3 A11 THR A 41 LYS A 47 -1 O LEU A 45 N TYR A 34 SHEET 4 A11 ILE A 3 GLY A 7 1 N ILE A 5 O LEU A 46 SHEET 5 A11 VAL A 70 ASN A 73 1 O VAL A 70 N GLY A 4 SHEET 6 A11 PHE A 189 ASP A 197 1 O VAL A 192 N ASN A 73 SHEET 7 A11 SER A 76 GLY A 79 1 N GLY A 79 O ASP A 197 SHEET 8 A11 ALA A 168 GLU A 172 -1 O VAL A 171 N GLY A 78 SHEET 9 A11 ALA A 140 SER A 147 1 N LEU A 144 O VAL A 169 SHEET 10 A11 ILE A 89 TYR A 97 1 N GLU A 94 O ILE A 145 SHEET 11 A11 PHE A 119 LYS A 120 -1 O PHE A 119 N THR A 95 SHEET 1 B 8 ILE A 20 LEU A 28 0 SHEET 2 B 8 CYS A 31 LEU A 38 -1 O GLN A 37 N ASP A 21 SHEET 3 B 8 THR A 41 LYS A 47 -1 O LEU A 45 N TYR A 34 SHEET 4 B 8 ILE A 3 GLY A 7 1 N ILE A 5 O LEU A 46 SHEET 5 B 8 VAL A 70 ASN A 73 1 O VAL A 70 N GLY A 4 SHEET 6 B 8 PHE A 189 ASP A 197 1 O VAL A 192 N ASN A 73 SHEET 7 B 8 ILE A 89 TYR A 97 -1 N VAL A 90 O ARG A 193 SHEET 8 B 8 PHE A 119 LYS A 120 -1 O PHE A 119 N THR A 95 SHEET 1 C 9 ASP B 21 LEU B 28 0 SHEET 2 C 9 CYS B 31 LEU B 38 -1 O GLN B 37 N ASP B 21 SHEET 3 C 9 THR B 41 LYS B 47 -1 O LEU B 45 N TYR B 34 SHEET 4 C 9 LYS B 2 GLY B 7 1 N ILE B 5 O LEU B 46 SHEET 5 C 9 VAL B 70 GLY B 79 1 O VAL B 70 N GLY B 4 SHEET 6 C 9 ALA B 168 GLU B 172 -1 O VAL B 171 N GLY B 78 SHEET 7 C 9 ALA B 140 SER B 147 1 N LEU B 144 O VAL B 169 SHEET 8 C 9 ILE B 89 TYR B 97 1 N VAL B 91 O VAL B 141 SHEET 9 C 9 PHE B 119 LYS B 120 -1 O PHE B 119 N THR B 95 SHEET 1 D 8 ASP B 21 LEU B 28 0 SHEET 2 D 8 CYS B 31 LEU B 38 -1 O GLN B 37 N ASP B 21 SHEET 3 D 8 THR B 41 LYS B 47 -1 O LEU B 45 N TYR B 34 SHEET 4 D 8 LYS B 2 GLY B 7 1 N ILE B 5 O LEU B 46 SHEET 5 D 8 VAL B 70 GLY B 79 1 O VAL B 70 N GLY B 4 SHEET 6 D 8 PHE B 189 ASP B 197 1 O ASP B 197 N GLY B 79 SHEET 7 D 8 ILE B 89 TYR B 97 -1 N VAL B 90 O ARG B 193 SHEET 8 D 8 PHE B 119 LYS B 120 -1 O PHE B 119 N THR B 95 SITE 1 AC1 15 ALA A 8 ILE A 50 SER A 76 ALA A 77 SITE 2 AC1 15 GLY A 78 ALA A 150 PHE A 151 ILE A 152 SITE 3 AC1 15 GLU A 172 MET A 173 GLU A 174 SER A 196 SITE 4 AC1 15 ASP A 197 PHE A 207 HOH A 403 SITE 1 AC2 2 ASN A 184 ASN A 186 SITE 1 AC3 5 HIS A 98 ALA A 150 HOH A 428 HOH A 514 SITE 2 AC3 5 HOH B 457 SITE 1 AC4 3 ASP A 208 HOH A 511 ASP B 208 SITE 1 AC5 4 PHE A 165 PRO A 166 ASP A 167 HOH A 446 SITE 1 AC6 14 ILE B 50 SER B 76 ALA B 77 GLY B 78 SITE 2 AC6 14 ALA B 150 PHE B 151 ILE B 152 GLU B 172 SITE 3 AC6 14 MET B 173 GLU B 174 SER B 196 ASP B 197 SITE 4 AC6 14 PHE B 207 HOH B 423 SITE 1 AC7 3 HIS B 0 ASP B 69 SER B 82 SITE 1 AC8 5 ASP A 123 LYS A 124 ASP B 21 ASN B 22 SITE 2 AC8 5 HOH B 490 SITE 1 AC9 4 GLY B 154 SER B 155 ASP B 200 GLN B 201 SITE 1 BC1 3 PHE B 165 PRO B 166 ASP B 167 CRYST1 69.410 82.540 93.110 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014407 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012115 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010740 0.00000