data_4F3S # _entry.id 4F3S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4F3S RCSB RCSB072418 WWPDB D_1000072418 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2012-05-23 _pdbx_database_PDB_obs_spr.pdb_id 4F3S _pdbx_database_PDB_obs_spr.replace_pdb_id 3R39 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id NYSGRC-001582 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4F3S _pdbx_database_status.recvd_initial_deposition_date 2012-05-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Agarwal, R.' 1 'Chamala, S.' 2 'Evans, B.' 3 'Gizzi, A.' 4 'Hillerich, B.' 5 'Kar, A.' 6 'Lafleur, J.' 7 'Siedel, R.' 8 'Villigas, G.' 9 'Zencheck, W.' 10 'Foti, R.' 11 'Almo, S.C.' 12 'Swaminathan, S.' 13 'New York Structural Genomics Research Consortium (NYSGRC)' 14 # _citation.id primary _citation.title 'Crystal structure of periplasmic D-alanine ABC transporter from Salmonella enterica' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Agarwal, R.' 1 primary 'Almo, S.C.' 2 primary 'Swaminathan, S.' 3 # _cell.entry_id 4F3S _cell.length_a 80.406 _cell.length_b 80.406 _cell.length_c 187.041 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4F3S _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative periplasmic binding protein' 29598.467 1 ? ? 'UNP residues 23-253' ? 2 non-polymer syn GLYCINE 75.067 1 ? ? ? ? 3 non-polymer syn D-ALANINE 89.093 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 5 water nat water 18.015 70 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)VDSIVEGRTLNVAVSPASPP(MSE)LFKSADGKLQGIDLELFSSYCQSRHCKLNITEYAWDG(MSE)LGAVASGQ ADVAFSGISITDKRKKVIDFSEPYYINSFYLVS(MSE)ANHKITLNNLNELNKYSIGYPRG(MSE)AYSDLIKNDLEPKG YYSLSKVKLYPTYNET(MSE)ADLKNGNLDLAFIEEPVYFTFKNKKK(MSE)PIESRYVFKNVDQLGIAFKKGSPVRDDF NLWLKEQGPQKISGIVDSW(MSE)KAENLYFQSHHHHHHWSHPQFEK ; _entity_poly.pdbx_seq_one_letter_code_can ;MVDSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFSSYCQSRHCKLNITEYAWDGMLGAVASGQADVAFSGISITD KRKKVIDFSEPYYINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPTYNETMADL KNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAFKKGSPVRDDFNLWLKEQGPQKISGIVDSWMKAENLYFQ SHHHHHHWSHPQFEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGRC-001582 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 VAL n 1 3 ASP n 1 4 SER n 1 5 ILE n 1 6 VAL n 1 7 GLU n 1 8 GLY n 1 9 ARG n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 VAL n 1 14 ALA n 1 15 VAL n 1 16 SER n 1 17 PRO n 1 18 ALA n 1 19 SER n 1 20 PRO n 1 21 PRO n 1 22 MSE n 1 23 LEU n 1 24 PHE n 1 25 LYS n 1 26 SER n 1 27 ALA n 1 28 ASP n 1 29 GLY n 1 30 LYS n 1 31 LEU n 1 32 GLN n 1 33 GLY n 1 34 ILE n 1 35 ASP n 1 36 LEU n 1 37 GLU n 1 38 LEU n 1 39 PHE n 1 40 SER n 1 41 SER n 1 42 TYR n 1 43 CYS n 1 44 GLN n 1 45 SER n 1 46 ARG n 1 47 HIS n 1 48 CYS n 1 49 LYS n 1 50 LEU n 1 51 ASN n 1 52 ILE n 1 53 THR n 1 54 GLU n 1 55 TYR n 1 56 ALA n 1 57 TRP n 1 58 ASP n 1 59 GLY n 1 60 MSE n 1 61 LEU n 1 62 GLY n 1 63 ALA n 1 64 VAL n 1 65 ALA n 1 66 SER n 1 67 GLY n 1 68 GLN n 1 69 ALA n 1 70 ASP n 1 71 VAL n 1 72 ALA n 1 73 PHE n 1 74 SER n 1 75 GLY n 1 76 ILE n 1 77 SER n 1 78 ILE n 1 79 THR n 1 80 ASP n 1 81 LYS n 1 82 ARG n 1 83 LYS n 1 84 LYS n 1 85 VAL n 1 86 ILE n 1 87 ASP n 1 88 PHE n 1 89 SER n 1 90 GLU n 1 91 PRO n 1 92 TYR n 1 93 TYR n 1 94 ILE n 1 95 ASN n 1 96 SER n 1 97 PHE n 1 98 TYR n 1 99 LEU n 1 100 VAL n 1 101 SER n 1 102 MSE n 1 103 ALA n 1 104 ASN n 1 105 HIS n 1 106 LYS n 1 107 ILE n 1 108 THR n 1 109 LEU n 1 110 ASN n 1 111 ASN n 1 112 LEU n 1 113 ASN n 1 114 GLU n 1 115 LEU n 1 116 ASN n 1 117 LYS n 1 118 TYR n 1 119 SER n 1 120 ILE n 1 121 GLY n 1 122 TYR n 1 123 PRO n 1 124 ARG n 1 125 GLY n 1 126 MSE n 1 127 ALA n 1 128 TYR n 1 129 SER n 1 130 ASP n 1 131 LEU n 1 132 ILE n 1 133 LYS n 1 134 ASN n 1 135 ASP n 1 136 LEU n 1 137 GLU n 1 138 PRO n 1 139 LYS n 1 140 GLY n 1 141 TYR n 1 142 TYR n 1 143 SER n 1 144 LEU n 1 145 SER n 1 146 LYS n 1 147 VAL n 1 148 LYS n 1 149 LEU n 1 150 TYR n 1 151 PRO n 1 152 THR n 1 153 TYR n 1 154 ASN n 1 155 GLU n 1 156 THR n 1 157 MSE n 1 158 ALA n 1 159 ASP n 1 160 LEU n 1 161 LYS n 1 162 ASN n 1 163 GLY n 1 164 ASN n 1 165 LEU n 1 166 ASP n 1 167 LEU n 1 168 ALA n 1 169 PHE n 1 170 ILE n 1 171 GLU n 1 172 GLU n 1 173 PRO n 1 174 VAL n 1 175 TYR n 1 176 PHE n 1 177 THR n 1 178 PHE n 1 179 LYS n 1 180 ASN n 1 181 LYS n 1 182 LYS n 1 183 LYS n 1 184 MSE n 1 185 PRO n 1 186 ILE n 1 187 GLU n 1 188 SER n 1 189 ARG n 1 190 TYR n 1 191 VAL n 1 192 PHE n 1 193 LYS n 1 194 ASN n 1 195 VAL n 1 196 ASP n 1 197 GLN n 1 198 LEU n 1 199 GLY n 1 200 ILE n 1 201 ALA n 1 202 PHE n 1 203 LYS n 1 204 LYS n 1 205 GLY n 1 206 SER n 1 207 PRO n 1 208 VAL n 1 209 ARG n 1 210 ASP n 1 211 ASP n 1 212 PHE n 1 213 ASN n 1 214 LEU n 1 215 TRP n 1 216 LEU n 1 217 LYS n 1 218 GLU n 1 219 GLN n 1 220 GLY n 1 221 PRO n 1 222 GLN n 1 223 LYS n 1 224 ILE n 1 225 SER n 1 226 GLY n 1 227 ILE n 1 228 VAL n 1 229 ASP n 1 230 SER n 1 231 TRP n 1 232 MSE n 1 233 LYS n 1 234 ALA n 1 235 GLU n 1 236 ASN n 1 237 LEU n 1 238 TYR n 1 239 PHE n 1 240 GLN n 1 241 SER n 1 242 HIS n 1 243 HIS n 1 244 HIS n 1 245 HIS n 1 246 HIS n 1 247 HIS n 1 248 TRP n 1 249 SER n 1 250 HIS n 1 251 PRO n 1 252 GLN n 1 253 PHE n 1 254 GLU n 1 255 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene STM1633 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella enterica subsp. enterica serovar Typhimurium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 90371 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)RIPL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8ZPA3_SALTY _struct_ref.pdbx_db_accession Q8ZPA3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFSSYCQSRHCKLNITEYAWDGMLGAVASGQADVAFSGISITDKR KKVIDFSEPYYINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPTYNETMADLKN GNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAFKKGSPVRDDFNLWLKEQGPQKISGIVDSWMK ; _struct_ref.pdbx_align_begin 23 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4F3S _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 233 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8ZPA3 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 253 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 233 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4F3S MSE A 1 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 1 1 1 4F3S VAL A 2 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 2 2 1 4F3S ALA A 234 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 234 3 1 4F3S GLU A 235 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 235 4 1 4F3S ASN A 236 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 236 5 1 4F3S LEU A 237 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 237 6 1 4F3S TYR A 238 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 238 7 1 4F3S PHE A 239 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 239 8 1 4F3S GLN A 240 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 240 9 1 4F3S SER A 241 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 241 10 1 4F3S HIS A 242 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 242 11 1 4F3S HIS A 243 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 243 12 1 4F3S HIS A 244 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 244 13 1 4F3S HIS A 245 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 245 14 1 4F3S HIS A 246 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 246 15 1 4F3S HIS A 247 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 247 16 1 4F3S TRP A 248 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 248 17 1 4F3S SER A 249 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 249 18 1 4F3S HIS A 250 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 250 19 1 4F3S PRO A 251 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 251 20 1 4F3S GLN A 252 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 252 21 1 4F3S PHE A 253 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 253 22 1 4F3S GLU A 254 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 254 23 1 4F3S LYS A 255 ? UNP Q8ZPA3 ? ? 'EXPRESSION TAG' 255 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4F3S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.95 _exptl_crystal.density_percent_sol 58.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details '1.8M Ammonium citrate tribasic pH 7, 10% Jeffamine M600 pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-02-22 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator SI-III _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9791 # _reflns.entry_id 4F3S _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.14 _reflns.number_obs 20516 _reflns.number_all 20516 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 41 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.14 _reflns_shell.d_res_low 2.22 _reflns_shell.percent_possible_all 97.3 _reflns_shell.Rmerge_I_obs 0.38 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5 _reflns_shell.pdbx_redundancy 37.83 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2004 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4F3S _refine.ls_number_reflns_obs 19397 _refine.ls_number_reflns_all 20516 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.45 _refine.ls_d_res_high 2.14 _refine.ls_percent_reflns_obs 99.66 _refine.ls_R_factor_obs 0.19097 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18933 _refine.ls_R_factor_R_free 0.22099 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1048 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 31.385 _refine.aniso_B[1][1] -0.01 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] 0.02 _refine.aniso_B[1][2] -0.01 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.165 _refine.pdbx_overall_ESU_R_Free 0.151 _refine.overall_SU_ML 0.099 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.706 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1805 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 70 _refine_hist.number_atoms_total 1891 _refine_hist.d_res_high 2.14 _refine_hist.d_res_low 46.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.025 0.022 ? 1861 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.844 1.970 ? 2520 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 7.101 5.000 ? 230 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 36.696 24.750 ? 80 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 16.600 15.000 ? 310 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 11.703 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.146 0.200 ? 273 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.011 0.021 ? 1409 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.287 1.500 ? 1159 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.298 2.000 ? 1860 ? 'X-RAY DIFFRACTION' r_scbond_it 4.154 3.000 ? 702 ? 'X-RAY DIFFRACTION' r_scangle_it 5.773 4.500 ? 660 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.141 _refine_ls_shell.d_res_low 2.197 _refine_ls_shell.number_reflns_R_work 1391 _refine_ls_shell.R_factor_R_work 0.216 _refine_ls_shell.percent_reflns_obs 99.25 _refine_ls_shell.R_factor_R_free 0.253 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4F3S _struct.title 'Crystal structure of periplasmic D-alanine ABC transporter from Salmonella enterica' _struct.pdbx_descriptor 'Putative periplasmic binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4F3S _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'Structural Genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, periplasmic, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 33 ? HIS A 47 ? GLY A 33 HIS A 47 1 ? 15 HELX_P HELX_P2 2 ALA A 56 ? SER A 66 ? ALA A 56 SER A 66 1 ? 11 HELX_P HELX_P3 3 THR A 79 ? LYS A 84 ? THR A 79 LYS A 84 1 ? 6 HELX_P HELX_P4 4 ASN A 111 ? TYR A 118 ? ASN A 111 TYR A 118 5 ? 8 HELX_P HELX_P5 5 ALA A 127 ? LEU A 136 ? ALA A 127 LEU A 136 1 ? 10 HELX_P HELX_P6 6 SER A 143 ? VAL A 147 ? SER A 143 VAL A 147 5 ? 5 HELX_P HELX_P7 7 THR A 152 ? ASN A 162 ? THR A 152 ASN A 162 1 ? 11 HELX_P HELX_P8 8 GLU A 172 ? LYS A 181 ? GLU A 172 LYS A 181 1 ? 10 HELX_P HELX_P9 9 SER A 206 ? GLY A 220 ? SER A 206 GLY A 220 1 ? 15 HELX_P HELX_P10 10 GLY A 220 ? ALA A 234 ? GLY A 220 ALA A 234 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PRO 21 C ? ? ? 1_555 A MSE 22 N ? ? A PRO 21 A MSE 22 1_555 ? ? ? ? ? ? ? 1.365 ? covale2 covale ? ? A MSE 22 C ? ? ? 1_555 A LEU 23 N ? ? A MSE 22 A LEU 23 1_555 ? ? ? ? ? ? ? 1.317 ? covale3 covale ? ? A GLY 59 C ? ? ? 1_555 A MSE 60 N ? ? A GLY 59 A MSE 60 1_555 ? ? ? ? ? ? ? 1.315 ? covale4 covale ? ? A MSE 60 C ? ? ? 1_555 A LEU 61 N ? ? A MSE 60 A LEU 61 1_555 ? ? ? ? ? ? ? 1.353 ? covale5 covale ? ? A SER 101 C ? ? ? 1_555 A MSE 102 N ? ? A SER 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A MSE 102 C ? ? ? 1_555 A ALA 103 N ? ? A MSE 102 A ALA 103 1_555 ? ? ? ? ? ? ? 1.341 ? covale7 covale ? ? A GLY 125 C ? ? ? 1_555 A MSE 126 N ? ? A GLY 125 A MSE 126 1_555 ? ? ? ? ? ? ? 1.337 ? covale8 covale ? ? A MSE 126 C ? ? ? 1_555 A ALA 127 N ? ? A MSE 126 A ALA 127 1_555 ? ? ? ? ? ? ? 1.329 ? covale9 covale ? ? A THR 156 C ? ? ? 1_555 A MSE 157 N ? ? A THR 156 A MSE 157 1_555 ? ? ? ? ? ? ? 1.328 ? covale10 covale ? ? A MSE 157 C ? ? ? 1_555 A ALA 158 N ? ? A MSE 157 A ALA 158 1_555 ? ? ? ? ? ? ? 1.342 ? covale11 covale ? ? A LYS 183 C ? ? ? 1_555 A MSE 184 N ? ? A LYS 183 A MSE 184 1_555 ? ? ? ? ? ? ? 1.330 ? covale12 covale ? ? A MSE 184 C ? ? ? 1_555 A PRO 185 N ? ? A MSE 184 A PRO 185 1_555 ? ? ? ? ? ? ? 1.338 ? covale13 covale ? ? A TRP 231 C ? ? ? 1_555 A MSE 232 N ? ? A TRP 231 A MSE 232 1_555 ? ? ? ? ? ? ? 1.319 ? covale14 covale ? ? A MSE 232 C ? ? ? 1_555 A LYS 233 N ? ? A MSE 232 A LYS 233 1_555 ? ? ? ? ? ? ? 1.340 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 20 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 20 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 21 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 21 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 8 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? parallel B 7 8 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 49 ? GLU A 54 ? LYS A 49 GLU A 54 A 2 THR A 10 ? VAL A 15 ? THR A 10 VAL A 15 A 3 VAL A 71 ? SER A 77 ? VAL A 71 SER A 77 A 4 ILE A 186 ? LYS A 203 ? ILE A 186 LYS A 203 A 5 ILE A 86 ? PHE A 88 ? ILE A 86 PHE A 88 B 1 LYS A 49 ? GLU A 54 ? LYS A 49 GLU A 54 B 2 THR A 10 ? VAL A 15 ? THR A 10 VAL A 15 B 3 VAL A 71 ? SER A 77 ? VAL A 71 SER A 77 B 4 ILE A 186 ? LYS A 203 ? ILE A 186 LYS A 203 B 5 TYR A 93 ? MSE A 102 ? TYR A 93 MSE A 102 B 6 LEU A 167 ? GLU A 171 ? LEU A 167 GLU A 171 B 7 ILE A 120 ? PRO A 123 ? ILE A 120 PRO A 123 B 8 LYS A 148 ? TYR A 150 ? LYS A 148 TYR A 150 C 1 PHE A 24 ? LYS A 25 ? PHE A 24 LYS A 25 C 2 LEU A 31 ? GLN A 32 ? LEU A 31 GLN A 32 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 49 ? O LYS A 49 N LEU A 11 ? N LEU A 11 A 2 3 N ALA A 14 ? N ALA A 14 O VAL A 71 ? O VAL A 71 A 3 4 N ALA A 72 ? N ALA A 72 O ALA A 201 ? O ALA A 201 A 4 5 O PHE A 202 ? O PHE A 202 N ASP A 87 ? N ASP A 87 B 1 2 O LYS A 49 ? O LYS A 49 N LEU A 11 ? N LEU A 11 B 2 3 N ALA A 14 ? N ALA A 14 O VAL A 71 ? O VAL A 71 B 3 4 N ALA A 72 ? N ALA A 72 O ALA A 201 ? O ALA A 201 B 4 5 O ARG A 189 ? O ARG A 189 N LEU A 99 ? N LEU A 99 B 5 6 N VAL A 100 ? N VAL A 100 O ALA A 168 ? O ALA A 168 B 6 7 O PHE A 169 ? O PHE A 169 N GLY A 121 ? N GLY A 121 B 7 8 N ILE A 120 ? N ILE A 120 O LYS A 148 ? O LYS A 148 C 1 2 N PHE A 24 ? N PHE A 24 O GLN A 32 ? O GLN A 32 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE GLY A 301' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE DAL A 302' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE PO4 A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 HOH E . ? HOH A 470 . ? 1_555 ? 2 AC2 9 TRP A 57 ? TRP A 57 . ? 1_555 ? 3 AC2 9 GLY A 75 ? GLY A 75 . ? 1_555 ? 4 AC2 9 ILE A 76 ? ILE A 76 . ? 1_555 ? 5 AC2 9 SER A 77 ? SER A 77 . ? 1_555 ? 6 AC2 9 ARG A 82 ? ARG A 82 . ? 1_555 ? 7 AC2 9 MSE A 126 ? MSE A 126 . ? 1_555 ? 8 AC2 9 ALA A 127 ? ALA A 127 . ? 1_555 ? 9 AC2 9 TYR A 128 ? TYR A 128 . ? 1_555 ? 10 AC2 9 GLU A 171 ? GLU A 171 . ? 1_555 ? 11 AC3 5 PRO A 91 ? PRO A 91 . ? 1_555 ? 12 AC3 5 TYR A 92 ? TYR A 92 . ? 1_555 ? 13 AC3 5 TYR A 93 ? TYR A 93 . ? 1_555 ? 14 AC3 5 HOH E . ? HOH A 415 . ? 1_555 ? 15 AC3 5 HOH E . ? HOH A 434 . ? 1_555 ? # _database_PDB_matrix.entry_id 4F3S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4F3S _atom_sites.fract_transf_matrix[1][1] 0.012437 _atom_sites.fract_transf_matrix[1][2] 0.007180 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014361 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005346 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 VAL 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 MSE 22 22 22 MSE MSE A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 HIS 47 47 47 HIS HIS A . n A 1 48 CYS 48 48 48 CYS CYS A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 TRP 57 57 57 TRP TRP A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 MSE 60 60 60 MSE MSE A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 MSE 102 102 102 MSE MSE A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 MSE 126 126 126 MSE MSE A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 TYR 141 141 141 TYR TYR A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 TYR 153 153 153 TYR TYR A . n A 1 154 ASN 154 154 154 ASN ASN A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 MSE 157 157 157 MSE MSE A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 PHE 169 169 169 PHE PHE A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 TYR 175 175 175 TYR TYR A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 THR 177 177 177 THR THR A . n A 1 178 PHE 178 178 178 PHE PHE A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 ASN 180 180 180 ASN ASN A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 MSE 184 184 184 MSE MSE A . n A 1 185 PRO 185 185 185 PRO PRO A . n A 1 186 ILE 186 186 186 ILE ILE A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 ARG 189 189 189 ARG ARG A . n A 1 190 TYR 190 190 190 TYR TYR A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 PHE 192 192 192 PHE PHE A . n A 1 193 LYS 193 193 193 LYS LYS A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 ASP 196 196 196 ASP ASP A . n A 1 197 GLN 197 197 197 GLN GLN A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 ILE 200 200 200 ILE ILE A . n A 1 201 ALA 201 201 201 ALA ALA A . n A 1 202 PHE 202 202 202 PHE PHE A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 LYS 204 204 204 LYS LYS A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 SER 206 206 206 SER SER A . n A 1 207 PRO 207 207 207 PRO PRO A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 ARG 209 209 209 ARG ARG A . n A 1 210 ASP 210 210 210 ASP ASP A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 PHE 212 212 212 PHE PHE A . n A 1 213 ASN 213 213 213 ASN ASN A . n A 1 214 LEU 214 214 214 LEU LEU A . n A 1 215 TRP 215 215 215 TRP TRP A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 LYS 217 217 217 LYS LYS A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 PRO 221 221 221 PRO PRO A . n A 1 222 GLN 222 222 222 GLN GLN A . n A 1 223 LYS 223 223 223 LYS LYS A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 ILE 227 227 227 ILE ILE A . n A 1 228 VAL 228 228 228 VAL VAL A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 SER 230 230 230 SER SER A . n A 1 231 TRP 231 231 231 TRP TRP A . n A 1 232 MSE 232 232 232 MSE MSE A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 GLU 235 235 ? ? ? A . n A 1 236 ASN 236 236 ? ? ? A . n A 1 237 LEU 237 237 ? ? ? A . n A 1 238 TYR 238 238 ? ? ? A . n A 1 239 PHE 239 239 ? ? ? A . n A 1 240 GLN 240 240 ? ? ? A . n A 1 241 SER 241 241 ? ? ? A . n A 1 242 HIS 242 242 ? ? ? A . n A 1 243 HIS 243 243 ? ? ? A . n A 1 244 HIS 244 244 ? ? ? A . n A 1 245 HIS 245 245 ? ? ? A . n A 1 246 HIS 246 246 ? ? ? A . n A 1 247 HIS 247 247 ? ? ? A . n A 1 248 TRP 248 248 ? ? ? A . n A 1 249 SER 249 249 ? ? ? A . n A 1 250 HIS 250 250 ? ? ? A . n A 1 251 PRO 251 251 ? ? ? A . n A 1 252 GLN 252 252 ? ? ? A . n A 1 253 PHE 253 253 ? ? ? A . n A 1 254 GLU 254 254 ? ? ? A . n A 1 255 LYS 255 255 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'New York Structural Genomics Research Consortium' _pdbx_SG_project.initial_of_center NYSGRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLY 1 301 400 GLY GLY A . C 3 DAL 1 302 501 DAL DAL A . D 4 PO4 1 303 256 PO4 PO4 A . E 5 HOH 1 401 2 HOH HOH A . E 5 HOH 2 402 3 HOH HOH A . E 5 HOH 3 403 4 HOH HOH A . E 5 HOH 4 404 5 HOH HOH A . E 5 HOH 5 405 6 HOH HOH A . E 5 HOH 6 406 7 HOH HOH A . E 5 HOH 7 407 8 HOH HOH A . E 5 HOH 8 408 9 HOH HOH A . E 5 HOH 9 409 10 HOH HOH A . E 5 HOH 10 410 11 HOH HOH A . E 5 HOH 11 411 12 HOH HOH A . E 5 HOH 12 412 13 HOH HOH A . E 5 HOH 13 413 14 HOH HOH A . E 5 HOH 14 414 15 HOH HOH A . E 5 HOH 15 415 16 HOH HOH A . E 5 HOH 16 416 17 HOH HOH A . E 5 HOH 17 417 18 HOH HOH A . E 5 HOH 18 418 19 HOH HOH A . E 5 HOH 19 419 21 HOH HOH A . E 5 HOH 20 420 22 HOH HOH A . E 5 HOH 21 421 23 HOH HOH A . E 5 HOH 22 422 24 HOH HOH A . E 5 HOH 23 423 25 HOH HOH A . E 5 HOH 24 424 26 HOH HOH A . E 5 HOH 25 425 27 HOH HOH A . E 5 HOH 26 426 28 HOH HOH A . E 5 HOH 27 427 29 HOH HOH A . E 5 HOH 28 428 30 HOH HOH A . E 5 HOH 29 429 31 HOH HOH A . E 5 HOH 30 430 32 HOH HOH A . E 5 HOH 31 431 33 HOH HOH A . E 5 HOH 32 432 34 HOH HOH A . E 5 HOH 33 433 35 HOH HOH A . E 5 HOH 34 434 36 HOH HOH A . E 5 HOH 35 435 37 HOH HOH A . E 5 HOH 36 436 38 HOH HOH A . E 5 HOH 37 437 39 HOH HOH A . E 5 HOH 38 438 40 HOH HOH A . E 5 HOH 39 439 41 HOH HOH A . E 5 HOH 40 440 42 HOH HOH A . E 5 HOH 41 441 43 HOH HOH A . E 5 HOH 42 442 44 HOH HOH A . E 5 HOH 43 443 45 HOH HOH A . E 5 HOH 44 444 46 HOH HOH A . E 5 HOH 45 445 47 HOH HOH A . E 5 HOH 46 446 48 HOH HOH A . E 5 HOH 47 447 49 HOH HOH A . E 5 HOH 48 448 50 HOH HOH A . E 5 HOH 49 449 51 HOH HOH A . E 5 HOH 50 450 52 HOH HOH A . E 5 HOH 51 451 53 HOH HOH A . E 5 HOH 52 452 54 HOH HOH A . E 5 HOH 53 453 55 HOH HOH A . E 5 HOH 54 454 56 HOH HOH A . E 5 HOH 55 455 57 HOH HOH A . E 5 HOH 56 456 58 HOH HOH A . E 5 HOH 57 457 59 HOH HOH A . E 5 HOH 58 458 60 HOH HOH A . E 5 HOH 59 459 61 HOH HOH A . E 5 HOH 60 460 62 HOH HOH A . E 5 HOH 61 461 63 HOH HOH A . E 5 HOH 62 462 64 HOH HOH A . E 5 HOH 63 463 65 HOH HOH A . E 5 HOH 64 464 66 HOH HOH A . E 5 HOH 65 465 67 HOH HOH A . E 5 HOH 66 466 68 HOH HOH A . E 5 HOH 67 467 69 HOH HOH A . E 5 HOH 68 468 70 HOH HOH A . E 5 HOH 69 469 71 HOH HOH A . E 5 HOH 70 470 72 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 22 A MSE 22 ? MET SELENOMETHIONINE 2 A MSE 60 A MSE 60 ? MET SELENOMETHIONINE 3 A MSE 102 A MSE 102 ? MET SELENOMETHIONINE 4 A MSE 126 A MSE 126 ? MET SELENOMETHIONINE 5 A MSE 157 A MSE 157 ? MET SELENOMETHIONINE 6 A MSE 184 A MSE 184 ? MET SELENOMETHIONINE 7 A MSE 232 A MSE 232 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 423 ? E HOH . 2 1 A HOH 426 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-23 2 'Structure model' 1 1 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 SHELXD phasing . ? 2 SHELXE 'model building' . ? 3 ARP/wARP 'model building' . ? 4 CCP4 'model building' . ? 5 Coot 'model building' . ? 6 REFMAC refinement 5.5.0109 ? 7 HKL-2000 'data reduction' . ? 8 HKL-2000 'data scaling' . ? 9 CCP4 phasing . ? 10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 16 ? ? -150.60 80.10 2 1 SER A 74 ? ? -169.64 64.67 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 4 ? OG ? A SER 4 OG 2 1 Y 1 A LYS 30 ? CG ? A LYS 30 CG 3 1 Y 1 A LYS 30 ? CD ? A LYS 30 CD 4 1 Y 1 A LYS 30 ? CE ? A LYS 30 CE 5 1 Y 1 A LYS 30 ? NZ ? A LYS 30 NZ 6 1 Y 1 A GLN 44 ? CD ? A GLN 44 CD 7 1 Y 1 A GLN 44 ? OE1 ? A GLN 44 OE1 8 1 Y 1 A GLN 44 ? NE2 ? A GLN 44 NE2 9 1 Y 1 A LYS 49 ? CG ? A LYS 49 CG 10 1 Y 1 A LYS 49 ? CD ? A LYS 49 CD 11 1 Y 1 A LYS 49 ? CE ? A LYS 49 CE 12 1 Y 1 A LYS 49 ? NZ ? A LYS 49 NZ 13 1 Y 1 A LYS 133 ? CD ? A LYS 133 CD 14 1 Y 1 A LYS 133 ? CE ? A LYS 133 CE 15 1 Y 1 A LYS 133 ? NZ ? A LYS 133 NZ 16 1 Y 1 A LYS 139 ? CE ? A LYS 139 CE 17 1 Y 1 A LYS 139 ? NZ ? A LYS 139 NZ 18 1 Y 1 A LYS 181 ? CD ? A LYS 181 CD 19 1 Y 1 A LYS 181 ? CE ? A LYS 181 CE 20 1 Y 1 A LYS 181 ? NZ ? A LYS 181 NZ 21 1 Y 1 A LYS 182 ? CE ? A LYS 182 CE 22 1 Y 1 A LYS 182 ? NZ ? A LYS 182 NZ 23 1 Y 1 A LYS 183 ? CE ? A LYS 183 CE 24 1 Y 1 A LYS 183 ? NZ ? A LYS 183 NZ 25 1 Y 1 A GLN 222 ? OE1 ? A GLN 222 OE1 26 1 Y 1 A GLN 222 ? NE2 ? A GLN 222 NE2 27 1 Y 1 A LYS 223 ? CD ? A LYS 223 CD 28 1 Y 1 A LYS 223 ? CE ? A LYS 223 CE 29 1 Y 1 A LYS 223 ? NZ ? A LYS 223 NZ 30 1 Y 1 A LYS 233 ? CG ? A LYS 233 CG 31 1 Y 1 A LYS 233 ? CD ? A LYS 233 CD 32 1 Y 1 A LYS 233 ? CE ? A LYS 233 CE 33 1 Y 1 A LYS 233 ? NZ ? A LYS 233 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A VAL 2 ? A VAL 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A GLU 235 ? A GLU 235 5 1 Y 1 A ASN 236 ? A ASN 236 6 1 Y 1 A LEU 237 ? A LEU 237 7 1 Y 1 A TYR 238 ? A TYR 238 8 1 Y 1 A PHE 239 ? A PHE 239 9 1 Y 1 A GLN 240 ? A GLN 240 10 1 Y 1 A SER 241 ? A SER 241 11 1 Y 1 A HIS 242 ? A HIS 242 12 1 Y 1 A HIS 243 ? A HIS 243 13 1 Y 1 A HIS 244 ? A HIS 244 14 1 Y 1 A HIS 245 ? A HIS 245 15 1 Y 1 A HIS 246 ? A HIS 246 16 1 Y 1 A HIS 247 ? A HIS 247 17 1 Y 1 A TRP 248 ? A TRP 248 18 1 Y 1 A SER 249 ? A SER 249 19 1 Y 1 A HIS 250 ? A HIS 250 20 1 Y 1 A PRO 251 ? A PRO 251 21 1 Y 1 A GLN 252 ? A GLN 252 22 1 Y 1 A PHE 253 ? A PHE 253 23 1 Y 1 A GLU 254 ? A GLU 254 24 1 Y 1 A LYS 255 ? A LYS 255 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCINE GLY 3 D-ALANINE DAL 4 'PHOSPHATE ION' PO4 5 water HOH #