HEADER TRANSFERASE/TRANSFERASE INHIBITOR 15-MAY-12 4F6V
TITLE CRYSTAL STRUCTURE OF DEHYDROSQUALENE SYNTHASE (CRTM) FROM S. AUREUS
TITLE 2 COMPLEXED WITH BPH-1034, MG2+ AND FMP.
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DEHYDROSQUALENE SYNTHASE;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: 4,4'-DIAPOPHYTOENE SYNTHASE, DAP SYNTHASE, DIAPOPHYTOENE
COMPND 5 SYNTHASE;
COMPND 6 EC: 2.5.1.96;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS;
SOURCE 3 ORGANISM_TAXID: 1280;
SOURCE 4 GENE: CRTM;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS TRANSFERASE, DEHYDROSQUALENE SYNTHASE, BPH-1034, DIKETO ACID,
KEYWDS 2 VIRULENCE FACTOR, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR F.-Y.LIN,Y.ZHANG,Y.-L.LIU,E.OLDFIELD
REVDAT 4 28-FEB-24 4F6V 1 REMARK SEQADV LINK
REVDAT 3 31-JAN-18 4F6V 1 JRNL
REVDAT 2 27-JUN-12 4F6V 1 JRNL
REVDAT 1 13-JUN-12 4F6V 0
JRNL AUTH Y.ZHANG,F.-Y.LIN,K.LI,W.ZHU,Y.L.LIU,R.CAO,R.PANG,E.LEE,
JRNL AUTH 2 J.AXELSON,M.HENSLER,K.WANG,K.J.MOLOHON,Y.WANG,D.A.MITCHELL,
JRNL AUTH 3 V.NIZET,E.OLDFIELD
JRNL TITL HIV-1 INTEGRASE INHIBITOR-INSPIRED ANTIBACTERIALS TARGETING
JRNL TITL 2 ISOPRENOID BIOSYNTHESIS.
JRNL REF ACS MED CHEM LETT V. 3 402 2012
JRNL REFN ISSN 1948-5875
JRNL PMID 22662288
JRNL DOI 10.1021/ML300038T
REMARK 2
REMARK 2 RESOLUTION. 2.30 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.5.0109
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6
REMARK 3 NUMBER OF REFLECTIONS : 14844
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.202
REMARK 3 R VALUE (WORKING SET) : 0.199
REMARK 3 FREE R VALUE : 0.267
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 779
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1050
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.96
REMARK 3 BIN R VALUE (WORKING SET) : 0.2360
REMARK 3 BIN FREE R VALUE SET COUNT : 53
REMARK 3 BIN FREE R VALUE : 0.2560
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2365
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 57
REMARK 3 SOLVENT ATOMS : 123
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.17
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.93000
REMARK 3 B22 (A**2) : 0.93000
REMARK 3 B33 (A**2) : -1.39000
REMARK 3 B12 (A**2) : 0.46000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): NULL
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.188
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.639
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2473 ; 0.005 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3331 ; 0.620 ; 1.954
REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 279 ; 7.304 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;35.591 ;24.307
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 436 ;18.288 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;21.683 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 346 ; 0.052 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1912 ; 0.014 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1401 ; 1.275 ; 1.500
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2267 ; 2.389 ; 2.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1072 ; 3.918 ; 3.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1064 ; 5.950 ; 4.500
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.40
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 4F6V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-12.
REMARK 100 THE DEPOSITION ID IS D_1000072529.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 01-NOV-09
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.4
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 21-ID-F
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9
REMARK 200 MONOCHROMATOR : GRAPHITE
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29174
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8
REMARK 200 DATA REDUNDANCY : 3.200
REMARK 200 R MERGE (I) : 0.08300
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASES
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 50.02
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2-1.0 M POTASSIUM SODIUM TARTRATE,
REMARK 280 PH 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 Y,X,-Z
REMARK 290 5555 X-Y,-Y,-Z+1/3
REMARK 290 6555 -X,-X+Y,-Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.57600
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.28800
REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.28800
REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 60.57600
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 449 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 ALA A -4
REMARK 465 ALA A -3
REMARK 465 ALA A -2
REMARK 465 ALA A -1
REMARK 465 ALA A 0
REMARK 465 VAL A 53
REMARK 465 TYR A 54
REMARK 465 GLY A 55
REMARK 465 HIS A 285
REMARK 465 ARG A 286
REMARK 465 ILE A 287
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LYS A 283 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O TYR A 284 O HOH A 503 1.96
REMARK 500 CB ASP A 114 O HOH A 523 2.02
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 GLN A 58 -70.02 -47.16
REMARK 500 SER A 82 -109.61 -99.19
REMARK 500 HIS A 116 48.64 -91.57
REMARK 500 ALA A 134 -49.19 -137.18
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 305 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASN A 168 OD1
REMARK 620 2 ASP A 172 OD2 83.5
REMARK 620 3 ZYM A 301 OAC 98.4 81.6
REMARK 620 4 ZYM A 301 OAD 81.2 132.3 56.7
REMARK 620 5 HOH A 495 O 95.0 120.8 155.1 105.4
REMARK 620 6 HOH A 496 O 161.5 85.1 65.5 96.0 103.3
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 304 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ZYM A 301 OAA
REMARK 620 2 SRT A 302 O2 104.4
REMARK 620 3 FJP A 303 OAE 119.4 103.8
REMARK 620 N 1 2
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZYM A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SRT A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FJP A 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 305
DBREF 4F6V A 1 287 UNP A9JQL9 CRTM_STAAU 1 287
SEQADV 4F6V ALA A -4 UNP A9JQL9 EXPRESSION TAG
SEQADV 4F6V ALA A -3 UNP A9JQL9 EXPRESSION TAG
SEQADV 4F6V ALA A -2 UNP A9JQL9 EXPRESSION TAG
SEQADV 4F6V ALA A -1 UNP A9JQL9 EXPRESSION TAG
SEQADV 4F6V ALA A 0 UNP A9JQL9 EXPRESSION TAG
SEQRES 1 A 292 ALA ALA ALA ALA ALA MET THR MET MET ASP MET ASN PHE
SEQRES 2 A 292 LYS TYR CYS HIS LYS ILE MET LYS LYS HIS SER LYS SER
SEQRES 3 A 292 PHE SER TYR ALA PHE ASP LEU LEU PRO GLU ASP GLN ARG
SEQRES 4 A 292 LYS ALA VAL TRP ALA ILE TYR ALA VAL CYS ARG LYS ILE
SEQRES 5 A 292 ASP ASP SER ILE ASP VAL TYR GLY ASP ILE GLN PHE LEU
SEQRES 6 A 292 ASN GLN ILE LYS GLU ASP ILE GLN SER ILE GLU LYS TYR
SEQRES 7 A 292 PRO TYR GLU TYR HIS HIS PHE GLN SER ASP ARG ARG ILE
SEQRES 8 A 292 MET MET ALA LEU GLN HIS VAL ALA GLN HIS LYS ASN ILE
SEQRES 9 A 292 ALA PHE GLN SER PHE TYR ASN LEU ILE ASP THR VAL TYR
SEQRES 10 A 292 LYS ASP GLN HIS PHE THR MET PHE GLU THR ASP ALA GLU
SEQRES 11 A 292 LEU PHE GLY TYR CYS TYR GLY VAL ALA GLY THR VAL GLY
SEQRES 12 A 292 GLU VAL LEU THR PRO ILE LEU SER ASP HIS GLU THR HIS
SEQRES 13 A 292 GLN THR TYR ASP VAL ALA ARG ARG LEU GLY GLU SER LEU
SEQRES 14 A 292 GLN LEU ILE ASN ILE LEU ARG ASP VAL GLY GLU ASP PHE
SEQRES 15 A 292 GLU ASN GLU ARG ILE TYR PHE SER LYS GLN ARG LEU LYS
SEQRES 16 A 292 GLN TYR GLU VAL ASP ILE ALA GLU VAL TYR GLN ASN GLY
SEQRES 17 A 292 VAL ASN ASN HIS TYR ILE ASP LEU TRP GLU TYR TYR ALA
SEQRES 18 A 292 ALA ILE ALA GLU LYS ASP PHE ARG ASP VAL MET ASP GLN
SEQRES 19 A 292 ILE LYS VAL PHE SER ILE GLU ALA GLN PRO ILE ILE GLU
SEQRES 20 A 292 LEU ALA ALA ARG ILE TYR ILE GLU ILE LEU ASP GLU VAL
SEQRES 21 A 292 ARG GLN ALA ASN TYR THR LEU HIS GLU ARG VAL PHE VAL
SEQRES 22 A 292 GLU LYS ARG LYS LYS ALA LYS LEU PHE HIS GLU ILE ASN
SEQRES 23 A 292 SER LYS TYR HIS ARG ILE
HET ZYM A 301 25
HET SRT A 302 10
HET FJP A 303 20
HET MG A 304 1
HET MG A 305 1
HETNAM ZYM 2,4-DIOXO-4-{[3-(3-PHENOXYPHENYL)PROPYL]AMINO}BUTANOIC
HETNAM 2 ZYM ACID
HETNAM SRT S,R MESO-TARTARIC ACID
HETNAM FJP (2E,6Z)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIEN-1-YL
HETNAM 2 FJP DIHYDROGEN PHOSPHATE
HETNAM MG MAGNESIUM ION
FORMUL 2 ZYM C19 H19 N O5
FORMUL 3 SRT C4 H6 O6
FORMUL 4 FJP C15 H27 O4 P
FORMUL 5 MG 2(MG 2+)
FORMUL 7 HOH *123(H2 O)
HELIX 1 1 THR A 2 SER A 19 1 18
HELIX 2 2 SER A 19 ASP A 27 1 9
HELIX 3 3 PRO A 30 ASP A 49 1 20
HELIX 4 4 ILE A 57 TYR A 73 1 17
HELIX 5 5 ASP A 83 LYS A 97 1 15
HELIX 6 6 ALA A 100 GLN A 115 1 16
HELIX 7 7 THR A 122 ALA A 134 1 13
HELIX 8 8 ALA A 134 LEU A 141 1 8
HELIX 9 9 LEU A 141 SER A 146 1 6
HELIX 10 10 THR A 150 ASP A 172 1 23
HELIX 11 11 ASP A 172 ASN A 179 1 8
HELIX 12 12 SER A 185 TYR A 192 1 8
HELIX 13 13 ASP A 195 GLY A 203 1 9
HELIX 14 14 ASN A 205 ASP A 228 1 24
HELIX 15 15 GLN A 229 PHE A 233 5 5
HELIX 16 16 GLU A 236 ALA A 258 1 23
HELIX 17 17 GLU A 269 TYR A 284 1 16
LINK OD1 ASN A 168 MG MG A 305 1555 1555 2.32
LINK OD2 ASP A 172 MG MG A 305 1555 1555 2.37
LINK OAA ZYM A 301 MG MG A 304 1555 1555 2.90
LINK OAC ZYM A 301 MG MG A 305 1555 1555 2.44
LINK OAD ZYM A 301 MG MG A 305 1555 1555 2.54
LINK O2 SRT A 302 MG MG A 304 1555 1555 2.81
LINK OAE FJP A 303 MG MG A 304 1555 1555 2.18
LINK MG MG A 305 O HOH A 495 1555 1555 2.53
LINK MG MG A 305 O HOH A 496 1555 1555 2.49
SITE 1 AC1 15 PHE A 22 TYR A 41 CYS A 44 ARG A 45
SITE 2 AC1 15 ASP A 48 VAL A 133 VAL A 137 GLN A 165
SITE 3 AC1 15 ASN A 168 ARG A 171 ASP A 172 FJP A 303
SITE 4 AC1 15 MG A 304 MG A 305 HOH A 496
SITE 1 AC2 10 HIS A 18 SER A 19 LYS A 20 SER A 21
SITE 2 AC2 10 ARG A 171 ARG A 265 FJP A 303 MG A 304
SITE 3 AC2 10 HOH A 410 HOH A 490
SITE 1 AC3 15 SER A 19 PHE A 22 PHE A 26 TYR A 41
SITE 2 AC3 15 ARG A 45 ALA A 134 GLY A 138 LEU A 160
SITE 3 AC3 15 GLY A 161 LEU A 164 ASN A 168 TYR A 248
SITE 4 AC3 15 ZYM A 301 SRT A 302 MG A 304
SITE 1 AC4 6 ASN A 168 ARG A 171 TYR A 248 ZYM A 301
SITE 2 AC4 6 SRT A 302 FJP A 303
SITE 1 AC5 5 ASN A 168 ASP A 172 ZYM A 301 HOH A 495
SITE 2 AC5 5 HOH A 496
CRYST1 80.712 80.712 90.864 90.00 90.00 120.00 P 32 2 1 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012390 0.007153 0.000000 0.00000
SCALE2 0.000000 0.014306 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011005 0.00000