data_4F78 # _entry.id 4F78 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4F78 RCSB RCSB072542 WWPDB D_1000072542 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetTrack IDP91774 . unspecified PDB 4MUQ 'Crystal Structure of Vancomycin Resistance D,D-dipeptidase VanXYg in complex with D-Ala-D-Ala phosphinate analog' unspecified PDB 4MUR 'Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant' unspecified PDB 4MUS ;Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant in complex with D-Ala-D-Ala phosphinate analog ; unspecified PDB 4MUT 'Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant in complex with D-Alanine' unspecified PDB 4OAK ;Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant in complex with D-Alanine-D-Alanine and copper (II) ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4F78 _pdbx_database_status.recvd_initial_deposition_date 2012-05-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stogios, P.J.' 1 'Wawrzak, Z.' 2 'Evdokimova, E.' 3 'Minasov, G.' 4 'Egorova, O.' 5 'Di Leo, R.' 6 'Kudritska, M.' 7 'Yim, V.' 8 'Meziane-Cherif, D.' 9 'Courvalin, P.' 10 'Savchenko, A.' 11 'Anderson, W.F.' 12 'Center for Structural Genomics of Infectious Diseases (CSGID)' 13 # _citation.id primary _citation.title 'Structural basis for the evolution of vancomycin resistance D,D-peptidases.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 111 _citation.page_first 5872 _citation.page_last 5877 _citation.year 2014 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24711382 _citation.pdbx_database_id_DOI 10.1073/pnas.1402259111 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Meziane-Cherif, D.' 1 primary 'Stogios, P.J.' 2 primary 'Evdokimova, E.' 3 primary 'Savchenko, A.' 4 primary 'Courvalin, P.' 5 # _cell.entry_id 4F78 _cell.length_a 38.912 _cell.length_b 43.960 _cell.length_c 80.199 _cell.angle_alpha 90.00 _cell.angle_beta 99.19 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4F78 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man D,D-dipeptidase/D,D-carboxypeptidase 29775.939 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 10 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 7 water nat water 18.015 187 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'D,D-peptidase, VanXYG' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)(MSE)KTIELEKEEIYCGNLLLVNKNYPLRDNNVKGLVPADIRFPNIL(MSE)KRDVANVLQLIFEKISAGNSI VPVSGYRSLEEQTAIYDGSLKDNGEDFTRKYVALPNHSEHQTGLAIDLGLNKKDIDFIRPDFPYDGICDEFRRAAPDYGF TQRYARDKEEITGISHEPWHFRYVGYPHSKI(MSE)QENGFSLEEYTQFIKAYLEDNKYLFEQAHRAEIEIYYVPAKDDK TLIKIPENCVYQISGNNIDGFVVTIWRKTDD ; _entity_poly.pdbx_seq_one_letter_code_can ;GMMKTIELEKEEIYCGNLLLVNKNYPLRDNNVKGLVPADIRFPNILMKRDVANVLQLIFEKISAGNSIVPVSGYRSLEEQ TAIYDGSLKDNGEDFTRKYVALPNHSEHQTGLAIDLGLNKKDIDFIRPDFPYDGICDEFRRAAPDYGFTQRYARDKEEIT GISHEPWHFRYVGYPHSKIMQENGFSLEEYTQFIKAYLEDNKYLFEQAHRAEIEIYYVPAKDDKTLIKIPENCVYQISGN NIDGFVVTIWRKTDD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP91774 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 MSE n 1 4 LYS n 1 5 THR n 1 6 ILE n 1 7 GLU n 1 8 LEU n 1 9 GLU n 1 10 LYS n 1 11 GLU n 1 12 GLU n 1 13 ILE n 1 14 TYR n 1 15 CYS n 1 16 GLY n 1 17 ASN n 1 18 LEU n 1 19 LEU n 1 20 LEU n 1 21 VAL n 1 22 ASN n 1 23 LYS n 1 24 ASN n 1 25 TYR n 1 26 PRO n 1 27 LEU n 1 28 ARG n 1 29 ASP n 1 30 ASN n 1 31 ASN n 1 32 VAL n 1 33 LYS n 1 34 GLY n 1 35 LEU n 1 36 VAL n 1 37 PRO n 1 38 ALA n 1 39 ASP n 1 40 ILE n 1 41 ARG n 1 42 PHE n 1 43 PRO n 1 44 ASN n 1 45 ILE n 1 46 LEU n 1 47 MSE n 1 48 LYS n 1 49 ARG n 1 50 ASP n 1 51 VAL n 1 52 ALA n 1 53 ASN n 1 54 VAL n 1 55 LEU n 1 56 GLN n 1 57 LEU n 1 58 ILE n 1 59 PHE n 1 60 GLU n 1 61 LYS n 1 62 ILE n 1 63 SER n 1 64 ALA n 1 65 GLY n 1 66 ASN n 1 67 SER n 1 68 ILE n 1 69 VAL n 1 70 PRO n 1 71 VAL n 1 72 SER n 1 73 GLY n 1 74 TYR n 1 75 ARG n 1 76 SER n 1 77 LEU n 1 78 GLU n 1 79 GLU n 1 80 GLN n 1 81 THR n 1 82 ALA n 1 83 ILE n 1 84 TYR n 1 85 ASP n 1 86 GLY n 1 87 SER n 1 88 LEU n 1 89 LYS n 1 90 ASP n 1 91 ASN n 1 92 GLY n 1 93 GLU n 1 94 ASP n 1 95 PHE n 1 96 THR n 1 97 ARG n 1 98 LYS n 1 99 TYR n 1 100 VAL n 1 101 ALA n 1 102 LEU n 1 103 PRO n 1 104 ASN n 1 105 HIS n 1 106 SER n 1 107 GLU n 1 108 HIS n 1 109 GLN n 1 110 THR n 1 111 GLY n 1 112 LEU n 1 113 ALA n 1 114 ILE n 1 115 ASP n 1 116 LEU n 1 117 GLY n 1 118 LEU n 1 119 ASN n 1 120 LYS n 1 121 LYS n 1 122 ASP n 1 123 ILE n 1 124 ASP n 1 125 PHE n 1 126 ILE n 1 127 ARG n 1 128 PRO n 1 129 ASP n 1 130 PHE n 1 131 PRO n 1 132 TYR n 1 133 ASP n 1 134 GLY n 1 135 ILE n 1 136 CYS n 1 137 ASP n 1 138 GLU n 1 139 PHE n 1 140 ARG n 1 141 ARG n 1 142 ALA n 1 143 ALA n 1 144 PRO n 1 145 ASP n 1 146 TYR n 1 147 GLY n 1 148 PHE n 1 149 THR n 1 150 GLN n 1 151 ARG n 1 152 TYR n 1 153 ALA n 1 154 ARG n 1 155 ASP n 1 156 LYS n 1 157 GLU n 1 158 GLU n 1 159 ILE n 1 160 THR n 1 161 GLY n 1 162 ILE n 1 163 SER n 1 164 HIS n 1 165 GLU n 1 166 PRO n 1 167 TRP n 1 168 HIS n 1 169 PHE n 1 170 ARG n 1 171 TYR n 1 172 VAL n 1 173 GLY n 1 174 TYR n 1 175 PRO n 1 176 HIS n 1 177 SER n 1 178 LYS n 1 179 ILE n 1 180 MSE n 1 181 GLN n 1 182 GLU n 1 183 ASN n 1 184 GLY n 1 185 PHE n 1 186 SER n 1 187 LEU n 1 188 GLU n 1 189 GLU n 1 190 TYR n 1 191 THR n 1 192 GLN n 1 193 PHE n 1 194 ILE n 1 195 LYS n 1 196 ALA n 1 197 TYR n 1 198 LEU n 1 199 GLU n 1 200 ASP n 1 201 ASN n 1 202 LYS n 1 203 TYR n 1 204 LEU n 1 205 PHE n 1 206 GLU n 1 207 GLN n 1 208 ALA n 1 209 HIS n 1 210 ARG n 1 211 ALA n 1 212 GLU n 1 213 ILE n 1 214 GLU n 1 215 ILE n 1 216 TYR n 1 217 TYR n 1 218 VAL n 1 219 PRO n 1 220 ALA n 1 221 LYS n 1 222 ASP n 1 223 ASP n 1 224 LYS n 1 225 THR n 1 226 LEU n 1 227 ILE n 1 228 LYS n 1 229 ILE n 1 230 PRO n 1 231 GLU n 1 232 ASN n 1 233 CYS n 1 234 VAL n 1 235 TYR n 1 236 GLN n 1 237 ILE n 1 238 SER n 1 239 GLY n 1 240 ASN n 1 241 ASN n 1 242 ILE n 1 243 ASP n 1 244 GLY n 1 245 PHE n 1 246 VAL n 1 247 VAL n 1 248 THR n 1 249 ILE n 1 250 TRP n 1 251 ARG n 1 252 LYS n 1 253 THR n 1 254 ASP n 1 255 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'vanXYG, vanYG2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain BM4518 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterococcus faecalis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1351 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'p15Tv lic' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9KHL8_ENTFL _struct_ref.pdbx_db_accession Q9KHL8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MMKTIELEKEEIYCGNLLLVNKNYPLRDNNVKGLVPADIRFPNILMKRDVANVLQLIFEKISAGNSIVPVSGYRSLEEQT AIYDGSLKDNGEDFTRKYVALPNHSEHQTGLAIDLGLNKKDIDFIRPDFPYDGICDEFRRAAPDYGFTQRYARDKEEITG ISHEPWHFRYVGYPHSKIMQENGFSLEEYTQFIKAYLEDNKYLFEQAHRAEIEIYYVPAKDDKTLIKIPENCVYQISGNN IDGFVVTIWRKTDD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4F78 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 255 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9KHL8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 254 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 254 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4F78 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9KHL8 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4F78 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_percent_sol 45.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pdbx_details '0.2 M ammonium sulfate, 0.1 M sodium cacodylate, 30% PEG 8K, pH 6.3, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2011-07-09 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI {1,1,1}' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97918 # _reflns.entry_id 4F78 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 79.17 _reflns.d_resolution_high 1.95 _reflns.number_obs 19747 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.078 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.06 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.329 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2850 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4F78 _refine.ls_number_reflns_obs 19734 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.584 _refine.ls_d_res_high 1.950 _refine.ls_percent_reflns_obs 98.35 _refine.ls_R_factor_obs 0.1554 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1536 _refine.ls_R_factor_R_free 0.1864 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.99 _refine.ls_number_reflns_R_free 949 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -1.7143 _refine.aniso_B[2][2] 1.3494 _refine.aniso_B[3][3] 0.3648 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -4.2779 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.399 _refine.solvent_model_param_bsol 48.654 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.73 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.19 _refine.pdbx_overall_phase_error 18.50 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2054 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 65 _refine_hist.number_atoms_solvent 187 _refine_hist.number_atoms_total 2306 _refine_hist.d_res_high 1.950 _refine_hist.d_res_low 39.584 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.016 ? ? 2201 ? 'X-RAY DIFFRACTION' f_angle_d 1.494 ? ? 2966 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.268 ? ? 840 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.116 ? ? 310 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 386 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.9500 2.0027 2747 0.2171 98.00 0.2775 . . 123 . . . . 'X-RAY DIFFRACTION' . 2.0027 2.0617 2708 0.1947 98.00 0.2068 . . 146 . . . . 'X-RAY DIFFRACTION' . 2.0617 2.1282 2768 0.1755 98.00 0.2173 . . 144 . . . . 'X-RAY DIFFRACTION' . 2.1282 2.2043 2715 0.1596 98.00 0.2052 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.2043 2.2925 2811 0.1600 98.00 0.2152 . . 146 . . . . 'X-RAY DIFFRACTION' . 2.2925 2.3968 2673 0.1557 98.00 0.1972 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.3968 2.5232 2766 0.1580 98.00 0.2262 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.5232 2.6812 2757 0.1529 99.00 0.1956 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.6812 2.8882 2757 0.1515 99.00 0.1882 . . 152 . . . . 'X-RAY DIFFRACTION' . 2.8882 3.1787 2758 0.1497 99.00 0.1934 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.1787 3.6384 2772 0.1439 99.00 0.1718 . . 145 . . . . 'X-RAY DIFFRACTION' . 3.6384 4.5829 2756 0.1227 99.00 0.1564 . . 147 . . . . 'X-RAY DIFFRACTION' . 4.5829 39.5926 2738 0.1596 98.00 0.1556 . . 144 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4F78 _struct.title 'Crystal Structure of Vancomycin Resistance D,D-dipeptidase VanXYg' _struct.pdbx_descriptor 'Crystal Structure of Vancomycin Resistance D,D-dipeptidase VanXYg' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4F78 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, NIAID, ALPHA+BETA PROTEIN, METALLOPEPTIDASE, HEDGEHOG/DD-PEPTIDASE FOLD, MEROPS M15B SUBFAMILY, ZN2+-DEPENDENT D, D-DIPEPTIDASE, VANCOMYCIN RESISTANCE, D-ALANINE-D-ALANINE, HYDROLASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 6 ? P N N 6 ? Q N N 6 ? R N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 11 ? CYS A 15 ? GLU A 10 CYS A 14 5 ? 5 HELX_P HELX_P2 2 ARG A 49 ? ILE A 62 ? ARG A 48 ILE A 61 1 ? 14 HELX_P HELX_P3 3 SER A 76 ? GLY A 92 ? SER A 75 GLY A 91 1 ? 17 HELX_P HELX_P4 4 GLY A 92 ? VAL A 100 ? GLY A 91 VAL A 99 1 ? 9 HELX_P HELX_P5 5 SER A 106 ? GLY A 111 ? SER A 105 GLY A 110 5 ? 6 HELX_P HELX_P6 6 ASP A 133 ? ALA A 143 ? ASP A 132 ALA A 142 1 ? 11 HELX_P HELX_P7 7 PRO A 144 ? TYR A 146 ? PRO A 143 TYR A 145 5 ? 3 HELX_P HELX_P8 8 ALA A 153 ? ASP A 155 ? ALA A 152 ASP A 154 5 ? 3 HELX_P HELX_P9 9 LYS A 156 ? GLY A 161 ? LYS A 155 GLY A 160 1 ? 6 HELX_P HELX_P10 10 PRO A 175 ? GLY A 184 ? PRO A 174 GLY A 183 1 ? 10 HELX_P HELX_P11 11 SER A 186 ? LYS A 195 ? SER A 185 LYS A 194 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.335 ? covale2 covale ? ? A MSE 2 C ? ? ? 1_555 A MSE 3 N ? ? A MSE 1 A MSE 2 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A MSE 3 C ? ? ? 1_555 A LYS 4 N ? ? A MSE 2 A LYS 3 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A LEU 46 C ? ? ? 1_555 A MSE 47 N A ? A LEU 45 A MSE 46 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A LEU 46 C ? ? ? 1_555 A MSE 47 N B ? A LEU 45 A MSE 46 1_555 ? ? ? ? ? ? ? 1.336 ? covale6 covale ? ? A MSE 47 C A ? ? 1_555 A LYS 48 N ? ? A MSE 46 A LYS 47 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A MSE 47 C B ? ? 1_555 A LYS 48 N ? ? A MSE 46 A LYS 47 1_555 ? ? ? ? ? ? ? 1.333 ? covale8 covale ? ? A ILE 179 C ? ? ? 1_555 A MSE 180 N ? ? A ILE 178 A MSE 179 1_555 ? ? ? ? ? ? ? 1.329 ? covale9 covale ? ? A MSE 180 C ? ? ? 1_555 A GLN 181 N ? ? A MSE 179 A GLN 180 1_555 ? ? ? ? ? ? ? 1.327 ? metalc1 metalc ? ? A ASP 115 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 114 A ZN 301 1_555 ? ? ? ? ? ? ? 2.180 ? metalc2 metalc ? ? A HIS 168 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 167 A ZN 301 1_555 ? ? ? ? ? ? ? 2.192 ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 R HOH . O ? ? A ZN 301 A HOH 418 1_555 ? ? ? ? ? ? ? 2.205 ? metalc4 metalc ? ? A HIS 108 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 107 A ZN 301 1_555 ? ? ? ? ? ? ? 2.228 ? metalc5 metalc ? ? A ASP 115 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 114 A ZN 301 1_555 ? ? ? ? ? ? ? 2.558 ? metalc6 metalc ? ? B ZN . ZN ? ? ? 1_555 D SO4 . O2 ? ? A ZN 301 A SO4 303 1_555 ? ? ? ? ? ? ? 2.700 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 174 A . ? TYR 173 A PRO 175 A ? PRO 174 A 1 4.71 2 HIS 209 A . ? HIS 208 A ARG 210 A ? ARG 209 A 1 -10.50 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 4 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MSE A 3 ? GLU A 9 ? MSE A 2 GLU A 8 A 2 LYS A 224 ? PRO A 230 ? LYS A 223 PRO A 229 B 1 LEU A 35 ? PRO A 37 ? LEU A 34 PRO A 36 B 2 LEU A 46 ? LYS A 48 ? LEU A 45 LYS A 47 C 1 ILE A 68 ? SER A 72 ? ILE A 67 SER A 71 C 2 ALA A 113 ? LEU A 118 ? ALA A 112 LEU A 117 C 3 HIS A 168 ? TYR A 171 ? HIS A 167 TYR A 170 C 4 PHE A 148 ? GLN A 150 ? PHE A 147 GLN A 149 D 1 TYR A 203 ? GLU A 206 ? TYR A 202 GLU A 205 D 2 GLU A 212 ? PRO A 219 ? GLU A 211 PRO A 218 D 3 GLY A 244 ? TRP A 250 ? GLY A 243 TRP A 249 D 4 VAL A 234 ? GLY A 239 ? VAL A 233 GLY A 238 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 4 ? N LYS A 3 O ILE A 229 ? O ILE A 228 B 1 2 N VAL A 36 ? N VAL A 35 O MSE A 47 ? O MSE A 46 C 1 2 N VAL A 71 ? N VAL A 70 O ASP A 115 ? O ASP A 114 C 2 3 N ILE A 114 ? N ILE A 113 O PHE A 169 ? O PHE A 168 C 3 4 O ARG A 170 ? O ARG A 169 N THR A 149 ? N THR A 148 D 1 2 N PHE A 205 ? N PHE A 204 O ILE A 213 ? O ILE A 212 D 2 3 N GLU A 214 ? N GLU A 213 O ILE A 249 ? O ILE A 248 D 3 4 O TRP A 250 ? O TRP A 249 N VAL A 234 ? N VAL A 233 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ZN A 301' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 302' AC3 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE SO4 A 303' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 304' AC5 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A 305' AC6 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 306' AC7 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 307' AC8 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE EDO A 308' AC9 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 309' BC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 310' BC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 311' BC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 312' BC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 313' BC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL A 314' BC6 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL A 315' BC7 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 316' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 108 ? HIS A 107 . ? 1_555 ? 2 AC1 5 ASP A 115 ? ASP A 114 . ? 1_555 ? 3 AC1 5 HIS A 168 ? HIS A 167 . ? 1_555 ? 4 AC1 5 SO4 D . ? SO4 A 303 . ? 1_555 ? 5 AC1 5 HOH R . ? HOH A 418 . ? 1_555 ? 6 AC2 4 MSE A 3 ? MSE A 2 . ? 1_555 ? 7 AC2 4 LYS A 4 ? LYS A 3 . ? 1_555 ? 8 AC2 4 THR A 5 ? THR A 4 . ? 1_555 ? 9 AC2 4 LYS A 228 ? LYS A 227 . ? 1_555 ? 10 AC3 11 ARG A 75 ? ARG A 74 . ? 1_555 ? 11 AC3 11 GLN A 80 ? GLN A 79 . ? 1_555 ? 12 AC3 11 VAL A 100 ? VAL A 99 . ? 1_555 ? 13 AC3 11 ALA A 101 ? ALA A 100 . ? 1_555 ? 14 AC3 11 SER A 106 ? SER A 105 . ? 1_555 ? 15 AC3 11 HIS A 108 ? HIS A 107 . ? 1_555 ? 16 AC3 11 HIS A 168 ? HIS A 167 . ? 1_555 ? 17 AC3 11 ZN B . ? ZN A 301 . ? 1_555 ? 18 AC3 11 HOH R . ? HOH A 424 . ? 1_555 ? 19 AC3 11 HOH R . ? HOH A 460 . ? 1_555 ? 20 AC3 11 HOH R . ? HOH A 483 . ? 1_555 ? 21 AC4 3 LYS A 121 ? LYS A 120 . ? 1_655 ? 22 AC4 3 GLU A 158 ? GLU A 157 . ? 1_555 ? 23 AC4 3 EDO K . ? EDO A 310 . ? 1_555 ? 24 AC5 7 PRO A 37 ? PRO A 36 . ? 1_555 ? 25 AC5 7 ALA A 38 ? ALA A 37 . ? 1_555 ? 26 AC5 7 ASN A 53 ? ASN A 52 . ? 1_555 ? 27 AC5 7 GLN A 192 ? GLN A 191 . ? 1_455 ? 28 AC5 7 HOH R . ? HOH A 442 . ? 1_455 ? 29 AC5 7 HOH R . ? HOH A 512 . ? 1_455 ? 30 AC5 7 HOH R . ? HOH A 516 . ? 1_555 ? 31 AC6 3 GLU A 189 ? GLU A 188 . ? 1_555 ? 32 AC6 3 PHE A 193 ? PHE A 192 . ? 1_555 ? 33 AC6 3 HOH R . ? HOH A 470 . ? 1_655 ? 34 AC7 5 PRO A 219 ? PRO A 218 . ? 1_555 ? 35 AC7 5 EDO I . ? EDO A 308 . ? 1_555 ? 36 AC7 5 HOH R . ? HOH A 431 . ? 1_555 ? 37 AC7 5 HOH R . ? HOH A 491 . ? 1_555 ? 38 AC7 5 HOH R . ? HOH A 524 . ? 1_555 ? 39 AC8 2 ASP A 200 ? ASP A 199 . ? 1_555 ? 40 AC8 2 EDO H . ? EDO A 307 . ? 1_555 ? 41 AC9 4 ASN A 22 ? ASN A 21 . ? 1_555 ? 42 AC9 4 LYS A 23 ? LYS A 22 . ? 1_555 ? 43 AC9 4 ILE A 159 ? ILE A 158 . ? 1_555 ? 44 AC9 4 THR A 160 ? THR A 159 . ? 1_555 ? 45 BC1 5 LYS A 98 ? LYS A 97 . ? 1_555 ? 46 BC1 5 GLY A 161 ? GLY A 160 . ? 1_555 ? 47 BC1 5 ILE A 162 ? ILE A 161 . ? 1_555 ? 48 BC1 5 SER A 163 ? SER A 162 . ? 1_555 ? 49 BC1 5 EDO E . ? EDO A 304 . ? 1_555 ? 50 BC2 4 GLY A 92 ? GLY A 91 . ? 1_555 ? 51 BC2 4 GLU A 93 ? GLU A 92 . ? 1_555 ? 52 BC2 4 ASP A 94 ? ASP A 93 . ? 1_555 ? 53 BC2 4 HOH R . ? HOH A 420 . ? 1_555 ? 54 BC3 4 GLU A 182 ? GLU A 181 . ? 1_555 ? 55 BC3 4 PHE A 205 ? PHE A 204 . ? 1_555 ? 56 BC3 4 GLU A 206 ? GLU A 205 . ? 1_555 ? 57 BC3 4 HOH R . ? HOH A 584 . ? 1_555 ? 58 BC4 3 ASP A 145 ? ASP A 144 . ? 1_555 ? 59 BC4 3 ARG A 210 ? ARG A 209 . ? 1_555 ? 60 BC4 3 HOH R . ? HOH A 531 . ? 1_555 ? 61 BC5 3 ALA A 153 ? ALA A 152 . ? 1_555 ? 62 BC5 3 ARG A 154 ? ARG A 153 . ? 1_555 ? 63 BC5 3 ASP A 155 ? ASP A 154 . ? 1_555 ? 64 BC6 3 ASN A 66 ? ASN A 65 . ? 1_555 ? 65 BC6 3 SER A 67 ? SER A 66 . ? 1_555 ? 66 BC6 3 LYS A 156 ? LYS A 155 . ? 1_455 ? 67 BC7 7 CYS A 15 ? CYS A 14 . ? 1_555 ? 68 BC7 7 GLY A 16 ? GLY A 15 . ? 1_555 ? 69 BC7 7 LEU A 19 ? LEU A 18 . ? 1_555 ? 70 BC7 7 VAL A 32 ? VAL A 31 . ? 1_555 ? 71 BC7 7 THR A 110 ? THR A 109 . ? 1_555 ? 72 BC7 7 HOH R . ? HOH A 578 . ? 1_555 ? 73 BC7 7 HOH R . ? HOH A 585 . ? 1_555 ? # _database_PDB_matrix.entry_id 4F78 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4F78 _atom_sites.fract_transf_matrix[1][1] 0.025699 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004159 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022748 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012631 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 MSE 3 2 2 MSE MSE A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 ILE 6 5 5 ILE ILE A . n A 1 7 GLU 7 6 6 GLU GLU A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 GLU 9 8 8 GLU GLU A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 GLU 11 10 10 GLU GLU A . n A 1 12 GLU 12 11 11 GLU GLU A . n A 1 13 ILE 13 12 12 ILE ILE A . n A 1 14 TYR 14 13 13 TYR TYR A . n A 1 15 CYS 15 14 14 CYS CYS A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 ASN 17 16 16 ASN ASN A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 ASN 22 21 21 ASN ASN A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 ASN 24 23 23 ASN ASN A . n A 1 25 TYR 25 24 24 TYR TYR A . n A 1 26 PRO 26 25 25 PRO PRO A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 ARG 28 27 27 ARG ARG A . n A 1 29 ASP 29 28 28 ASP ASP A . n A 1 30 ASN 30 29 29 ASN ASN A . n A 1 31 ASN 31 30 30 ASN ASN A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 LYS 33 32 32 LYS LYS A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 ALA 38 37 37 ALA ALA A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 ARG 41 40 40 ARG ARG A . n A 1 42 PHE 42 41 41 PHE PHE A . n A 1 43 PRO 43 42 42 PRO PRO A . n A 1 44 ASN 44 43 43 ASN ASN A . n A 1 45 ILE 45 44 44 ILE ILE A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 MSE 47 46 46 MSE MSE A . n A 1 48 LYS 48 47 47 LYS LYS A . n A 1 49 ARG 49 48 48 ARG ARG A . n A 1 50 ASP 50 49 49 ASP ASP A . n A 1 51 VAL 51 50 50 VAL VAL A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 ASN 53 52 52 ASN ASN A . n A 1 54 VAL 54 53 53 VAL VAL A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 GLN 56 55 55 GLN GLN A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 PHE 59 58 58 PHE PHE A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 LYS 61 60 60 LYS LYS A . n A 1 62 ILE 62 61 61 ILE ILE A . n A 1 63 SER 63 62 62 SER SER A . n A 1 64 ALA 64 63 63 ALA ALA A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 ASN 66 65 65 ASN ASN A . n A 1 67 SER 67 66 66 SER SER A . n A 1 68 ILE 68 67 67 ILE ILE A . n A 1 69 VAL 69 68 68 VAL VAL A . n A 1 70 PRO 70 69 69 PRO PRO A . n A 1 71 VAL 71 70 70 VAL VAL A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 GLY 73 72 72 GLY GLY A . n A 1 74 TYR 74 73 73 TYR TYR A . n A 1 75 ARG 75 74 74 ARG ARG A . n A 1 76 SER 76 75 75 SER SER A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 GLU 78 77 77 GLU GLU A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 GLN 80 79 79 GLN GLN A . n A 1 81 THR 81 80 80 THR THR A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 TYR 84 83 83 TYR TYR A . n A 1 85 ASP 85 84 84 ASP ASP A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 ASN 91 90 90 ASN ASN A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 GLU 93 92 92 GLU GLU A . n A 1 94 ASP 94 93 93 ASP ASP A . n A 1 95 PHE 95 94 94 PHE PHE A . n A 1 96 THR 96 95 95 THR THR A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 LYS 98 97 97 LYS LYS A . n A 1 99 TYR 99 98 98 TYR TYR A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 PRO 103 102 102 PRO PRO A . n A 1 104 ASN 104 103 103 ASN ASN A . n A 1 105 HIS 105 104 104 HIS HIS A . n A 1 106 SER 106 105 105 SER SER A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 HIS 108 107 107 HIS HIS A . n A 1 109 GLN 109 108 108 GLN GLN A . n A 1 110 THR 110 109 109 THR THR A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 ILE 114 113 113 ILE ILE A . n A 1 115 ASP 115 114 114 ASP ASP A . n A 1 116 LEU 116 115 115 LEU LEU A . n A 1 117 GLY 117 116 116 GLY GLY A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 ASN 119 118 118 ASN ASN A . n A 1 120 LYS 120 119 119 LYS LYS A . n A 1 121 LYS 121 120 120 LYS LYS A . n A 1 122 ASP 122 121 121 ASP ASP A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 ASP 124 123 123 ASP ASP A . n A 1 125 PHE 125 124 124 PHE PHE A . n A 1 126 ILE 126 125 125 ILE ILE A . n A 1 127 ARG 127 126 126 ARG ARG A . n A 1 128 PRO 128 127 127 PRO PRO A . n A 1 129 ASP 129 128 128 ASP ASP A . n A 1 130 PHE 130 129 129 PHE PHE A . n A 1 131 PRO 131 130 130 PRO PRO A . n A 1 132 TYR 132 131 131 TYR TYR A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 GLY 134 133 133 GLY GLY A . n A 1 135 ILE 135 134 134 ILE ILE A . n A 1 136 CYS 136 135 135 CYS CYS A . n A 1 137 ASP 137 136 136 ASP ASP A . n A 1 138 GLU 138 137 137 GLU GLU A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 ARG 140 139 139 ARG ARG A . n A 1 141 ARG 141 140 140 ARG ARG A . n A 1 142 ALA 142 141 141 ALA ALA A . n A 1 143 ALA 143 142 142 ALA ALA A . n A 1 144 PRO 144 143 143 PRO PRO A . n A 1 145 ASP 145 144 144 ASP ASP A . n A 1 146 TYR 146 145 145 TYR TYR A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 PHE 148 147 147 PHE PHE A . n A 1 149 THR 149 148 148 THR THR A . n A 1 150 GLN 150 149 149 GLN GLN A . n A 1 151 ARG 151 150 150 ARG ARG A . n A 1 152 TYR 152 151 151 TYR TYR A . n A 1 153 ALA 153 152 152 ALA ALA A . n A 1 154 ARG 154 153 153 ARG ARG A . n A 1 155 ASP 155 154 154 ASP ASP A . n A 1 156 LYS 156 155 155 LYS LYS A . n A 1 157 GLU 157 156 156 GLU GLU A . n A 1 158 GLU 158 157 157 GLU GLU A . n A 1 159 ILE 159 158 158 ILE ILE A . n A 1 160 THR 160 159 159 THR THR A . n A 1 161 GLY 161 160 160 GLY GLY A . n A 1 162 ILE 162 161 161 ILE ILE A . n A 1 163 SER 163 162 162 SER SER A . n A 1 164 HIS 164 163 163 HIS HIS A . n A 1 165 GLU 165 164 164 GLU GLU A . n A 1 166 PRO 166 165 165 PRO PRO A . n A 1 167 TRP 167 166 166 TRP TRP A . n A 1 168 HIS 168 167 167 HIS HIS A . n A 1 169 PHE 169 168 168 PHE PHE A . n A 1 170 ARG 170 169 169 ARG ARG A . n A 1 171 TYR 171 170 170 TYR TYR A . n A 1 172 VAL 172 171 171 VAL VAL A . n A 1 173 GLY 173 172 172 GLY GLY A . n A 1 174 TYR 174 173 173 TYR TYR A . n A 1 175 PRO 175 174 174 PRO PRO A . n A 1 176 HIS 176 175 175 HIS HIS A . n A 1 177 SER 177 176 176 SER SER A . n A 1 178 LYS 178 177 177 LYS LYS A . n A 1 179 ILE 179 178 178 ILE ILE A . n A 1 180 MSE 180 179 179 MSE MSE A . n A 1 181 GLN 181 180 180 GLN GLN A . n A 1 182 GLU 182 181 181 GLU GLU A . n A 1 183 ASN 183 182 182 ASN ASN A . n A 1 184 GLY 184 183 183 GLY GLY A . n A 1 185 PHE 185 184 184 PHE PHE A . n A 1 186 SER 186 185 185 SER SER A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 GLU 188 187 187 GLU GLU A . n A 1 189 GLU 189 188 188 GLU GLU A . n A 1 190 TYR 190 189 189 TYR TYR A . n A 1 191 THR 191 190 190 THR THR A . n A 1 192 GLN 192 191 191 GLN GLN A . n A 1 193 PHE 193 192 192 PHE PHE A . n A 1 194 ILE 194 193 193 ILE ILE A . n A 1 195 LYS 195 194 194 LYS LYS A . n A 1 196 ALA 196 195 195 ALA ALA A . n A 1 197 TYR 197 196 196 TYR TYR A . n A 1 198 LEU 198 197 197 LEU LEU A . n A 1 199 GLU 199 198 198 GLU GLU A . n A 1 200 ASP 200 199 199 ASP ASP A . n A 1 201 ASN 201 200 200 ASN ASN A . n A 1 202 LYS 202 201 201 LYS LYS A . n A 1 203 TYR 203 202 202 TYR TYR A . n A 1 204 LEU 204 203 203 LEU LEU A . n A 1 205 PHE 205 204 204 PHE PHE A . n A 1 206 GLU 206 205 205 GLU GLU A . n A 1 207 GLN 207 206 206 GLN GLN A . n A 1 208 ALA 208 207 207 ALA ALA A . n A 1 209 HIS 209 208 208 HIS HIS A . n A 1 210 ARG 210 209 209 ARG ARG A . n A 1 211 ALA 211 210 210 ALA ALA A . n A 1 212 GLU 212 211 211 GLU GLU A . n A 1 213 ILE 213 212 212 ILE ILE A . n A 1 214 GLU 214 213 213 GLU GLU A . n A 1 215 ILE 215 214 214 ILE ILE A . n A 1 216 TYR 216 215 215 TYR TYR A . n A 1 217 TYR 217 216 216 TYR TYR A . n A 1 218 VAL 218 217 217 VAL VAL A . n A 1 219 PRO 219 218 218 PRO PRO A . n A 1 220 ALA 220 219 219 ALA ALA A . n A 1 221 LYS 221 220 220 LYS LYS A . n A 1 222 ASP 222 221 221 ASP ASP A . n A 1 223 ASP 223 222 222 ASP ASP A . n A 1 224 LYS 224 223 223 LYS LYS A . n A 1 225 THR 225 224 224 THR THR A . n A 1 226 LEU 226 225 225 LEU LEU A . n A 1 227 ILE 227 226 226 ILE ILE A . n A 1 228 LYS 228 227 227 LYS LYS A . n A 1 229 ILE 229 228 228 ILE ILE A . n A 1 230 PRO 230 229 229 PRO PRO A . n A 1 231 GLU 231 230 230 GLU GLU A . n A 1 232 ASN 232 231 231 ASN ASN A . n A 1 233 CYS 233 232 232 CYS CYS A . n A 1 234 VAL 234 233 233 VAL VAL A . n A 1 235 TYR 235 234 234 TYR TYR A . n A 1 236 GLN 236 235 235 GLN GLN A . n A 1 237 ILE 237 236 236 ILE ILE A . n A 1 238 SER 238 237 237 SER SER A . n A 1 239 GLY 239 238 238 GLY GLY A . n A 1 240 ASN 240 239 239 ASN ASN A . n A 1 241 ASN 241 240 240 ASN ASN A . n A 1 242 ILE 242 241 241 ILE ILE A . n A 1 243 ASP 243 242 242 ASP ASP A . n A 1 244 GLY 244 243 243 GLY GLY A . n A 1 245 PHE 245 244 244 PHE PHE A . n A 1 246 VAL 246 245 245 VAL VAL A . n A 1 247 VAL 247 246 246 VAL VAL A . n A 1 248 THR 248 247 247 THR THR A . n A 1 249 ILE 249 248 248 ILE ILE A . n A 1 250 TRP 250 249 249 TRP TRP A . n A 1 251 ARG 251 250 250 ARG ARG A . n A 1 252 LYS 252 251 ? ? ? A . n A 1 253 THR 253 252 ? ? ? A . n A 1 254 ASP 254 253 ? ? ? A . n A 1 255 ASP 255 254 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 301 1 ZN ZN A . C 3 CL 1 302 2 CL CL A . D 4 SO4 1 303 3 SO4 SO4 A . E 5 EDO 1 304 9 EDO EDO A . F 5 EDO 1 305 10 EDO EDO A . G 5 EDO 1 306 11 EDO EDO A . H 5 EDO 1 307 12 EDO EDO A . I 5 EDO 1 308 13 EDO EDO A . J 5 EDO 1 309 14 EDO EDO A . K 5 EDO 1 310 15 EDO EDO A . L 5 EDO 1 311 16 EDO EDO A . M 5 EDO 1 312 17 EDO EDO A . N 5 EDO 1 313 18 EDO EDO A . O 6 GOL 1 314 19 GOL GOL A . P 6 GOL 1 315 20 GOL GOL A . Q 6 GOL 1 316 21 GOL GOL A . R 7 HOH 1 401 2 HOH HOH A . R 7 HOH 2 402 3 HOH HOH A . R 7 HOH 3 403 4 HOH HOH A . R 7 HOH 4 404 5 HOH HOH A . R 7 HOH 5 405 6 HOH HOH A . R 7 HOH 6 406 7 HOH HOH A . R 7 HOH 7 407 8 HOH HOH A . R 7 HOH 8 408 9 HOH HOH A . R 7 HOH 9 409 10 HOH HOH A . R 7 HOH 10 410 11 HOH HOH A . R 7 HOH 11 411 12 HOH HOH A . R 7 HOH 12 412 13 HOH HOH A . R 7 HOH 13 413 14 HOH HOH A . R 7 HOH 14 414 15 HOH HOH A . R 7 HOH 15 415 16 HOH HOH A . R 7 HOH 16 416 17 HOH HOH A . R 7 HOH 17 417 18 HOH HOH A . R 7 HOH 18 418 19 HOH HOH A . R 7 HOH 19 419 20 HOH HOH A . R 7 HOH 20 420 21 HOH HOH A . R 7 HOH 21 421 23 HOH HOH A . R 7 HOH 22 422 24 HOH HOH A . R 7 HOH 23 423 25 HOH HOH A . R 7 HOH 24 424 26 HOH HOH A . R 7 HOH 25 425 27 HOH HOH A . R 7 HOH 26 426 28 HOH HOH A . R 7 HOH 27 427 29 HOH HOH A . R 7 HOH 28 428 30 HOH HOH A . R 7 HOH 29 429 31 HOH HOH A . R 7 HOH 30 430 32 HOH HOH A . R 7 HOH 31 431 33 HOH HOH A . R 7 HOH 32 432 34 HOH HOH A . R 7 HOH 33 433 35 HOH HOH A . R 7 HOH 34 434 36 HOH HOH A . R 7 HOH 35 435 37 HOH HOH A . R 7 HOH 36 436 38 HOH HOH A . R 7 HOH 37 437 39 HOH HOH A . R 7 HOH 38 438 40 HOH HOH A . R 7 HOH 39 439 41 HOH HOH A . R 7 HOH 40 440 44 HOH HOH A . R 7 HOH 41 441 45 HOH HOH A . R 7 HOH 42 442 46 HOH HOH A . R 7 HOH 43 443 47 HOH HOH A . R 7 HOH 44 444 48 HOH HOH A . R 7 HOH 45 445 49 HOH HOH A . R 7 HOH 46 446 51 HOH HOH A . R 7 HOH 47 447 52 HOH HOH A . R 7 HOH 48 448 53 HOH HOH A . R 7 HOH 49 449 54 HOH HOH A . R 7 HOH 50 450 55 HOH HOH A . R 7 HOH 51 451 56 HOH HOH A . R 7 HOH 52 452 57 HOH HOH A . R 7 HOH 53 453 58 HOH HOH A . R 7 HOH 54 454 59 HOH HOH A . R 7 HOH 55 455 60 HOH HOH A . R 7 HOH 56 456 62 HOH HOH A . R 7 HOH 57 457 63 HOH HOH A . R 7 HOH 58 458 65 HOH HOH A . R 7 HOH 59 459 66 HOH HOH A . R 7 HOH 60 460 67 HOH HOH A . R 7 HOH 61 461 68 HOH HOH A . R 7 HOH 62 462 70 HOH HOH A . R 7 HOH 63 463 72 HOH HOH A . R 7 HOH 64 464 73 HOH HOH A . R 7 HOH 65 465 74 HOH HOH A . R 7 HOH 66 466 75 HOH HOH A . R 7 HOH 67 467 76 HOH HOH A . R 7 HOH 68 468 77 HOH HOH A . R 7 HOH 69 469 78 HOH HOH A . R 7 HOH 70 470 79 HOH HOH A . R 7 HOH 71 471 80 HOH HOH A . R 7 HOH 72 472 81 HOH HOH A . R 7 HOH 73 473 83 HOH HOH A . R 7 HOH 74 474 86 HOH HOH A . R 7 HOH 75 475 87 HOH HOH A . R 7 HOH 76 476 88 HOH HOH A . R 7 HOH 77 477 89 HOH HOH A . R 7 HOH 78 478 90 HOH HOH A . R 7 HOH 79 479 91 HOH HOH A . R 7 HOH 80 480 92 HOH HOH A . R 7 HOH 81 481 93 HOH HOH A . R 7 HOH 82 482 94 HOH HOH A . R 7 HOH 83 483 95 HOH HOH A . R 7 HOH 84 484 96 HOH HOH A . R 7 HOH 85 485 97 HOH HOH A . R 7 HOH 86 486 98 HOH HOH A . R 7 HOH 87 487 99 HOH HOH A . R 7 HOH 88 488 100 HOH HOH A . R 7 HOH 89 489 101 HOH HOH A . R 7 HOH 90 490 102 HOH HOH A . R 7 HOH 91 491 103 HOH HOH A . R 7 HOH 92 492 106 HOH HOH A . R 7 HOH 93 493 108 HOH HOH A . R 7 HOH 94 494 109 HOH HOH A . R 7 HOH 95 495 110 HOH HOH A . R 7 HOH 96 496 112 HOH HOH A . R 7 HOH 97 497 113 HOH HOH A . R 7 HOH 98 498 114 HOH HOH A . R 7 HOH 99 499 115 HOH HOH A . R 7 HOH 100 500 116 HOH HOH A . R 7 HOH 101 501 122 HOH HOH A . R 7 HOH 102 502 123 HOH HOH A . R 7 HOH 103 503 124 HOH HOH A . R 7 HOH 104 504 127 HOH HOH A . R 7 HOH 105 505 129 HOH HOH A . R 7 HOH 106 506 130 HOH HOH A . R 7 HOH 107 507 132 HOH HOH A . R 7 HOH 108 508 133 HOH HOH A . R 7 HOH 109 509 135 HOH HOH A . R 7 HOH 110 510 137 HOH HOH A . R 7 HOH 111 511 138 HOH HOH A . R 7 HOH 112 512 140 HOH HOH A . R 7 HOH 113 513 141 HOH HOH A . R 7 HOH 114 514 142 HOH HOH A . R 7 HOH 115 515 143 HOH HOH A . R 7 HOH 116 516 144 HOH HOH A . R 7 HOH 117 517 145 HOH HOH A . R 7 HOH 118 518 146 HOH HOH A . R 7 HOH 119 519 149 HOH HOH A . R 7 HOH 120 520 150 HOH HOH A . R 7 HOH 121 521 151 HOH HOH A . R 7 HOH 122 522 152 HOH HOH A . R 7 HOH 123 523 153 HOH HOH A . R 7 HOH 124 524 154 HOH HOH A . R 7 HOH 125 525 155 HOH HOH A . R 7 HOH 126 526 156 HOH HOH A . R 7 HOH 127 527 157 HOH HOH A . R 7 HOH 128 528 158 HOH HOH A . R 7 HOH 129 529 159 HOH HOH A . R 7 HOH 130 530 160 HOH HOH A . R 7 HOH 131 531 161 HOH HOH A . R 7 HOH 132 532 162 HOH HOH A . R 7 HOH 133 533 168 HOH HOH A . R 7 HOH 134 534 169 HOH HOH A . R 7 HOH 135 535 172 HOH HOH A . R 7 HOH 136 536 173 HOH HOH A . R 7 HOH 137 537 174 HOH HOH A . R 7 HOH 138 538 179 HOH HOH A . R 7 HOH 139 539 183 HOH HOH A . R 7 HOH 140 540 184 HOH HOH A . R 7 HOH 141 541 188 HOH HOH A . R 7 HOH 142 542 189 HOH HOH A . R 7 HOH 143 543 197 HOH HOH A . R 7 HOH 144 544 203 HOH HOH A . R 7 HOH 145 545 205 HOH HOH A . R 7 HOH 146 546 207 HOH HOH A . R 7 HOH 147 547 208 HOH HOH A . R 7 HOH 148 548 209 HOH HOH A . R 7 HOH 149 549 212 HOH HOH A . R 7 HOH 150 550 213 HOH HOH A . R 7 HOH 151 551 214 HOH HOH A . R 7 HOH 152 552 215 HOH HOH A . R 7 HOH 153 553 217 HOH HOH A . R 7 HOH 154 554 218 HOH HOH A . R 7 HOH 155 555 219 HOH HOH A . R 7 HOH 156 556 221 HOH HOH A . R 7 HOH 157 557 222 HOH HOH A . R 7 HOH 158 558 225 HOH HOH A . R 7 HOH 159 559 228 HOH HOH A . R 7 HOH 160 560 229 HOH HOH A . R 7 HOH 161 561 230 HOH HOH A . R 7 HOH 162 562 231 HOH HOH A . R 7 HOH 163 563 233 HOH HOH A . R 7 HOH 164 564 234 HOH HOH A . R 7 HOH 165 565 236 HOH HOH A . R 7 HOH 166 566 238 HOH HOH A . R 7 HOH 167 567 239 HOH HOH A . R 7 HOH 168 568 241 HOH HOH A . R 7 HOH 169 569 243 HOH HOH A . R 7 HOH 170 570 244 HOH HOH A . R 7 HOH 171 571 245 HOH HOH A . R 7 HOH 172 572 246 HOH HOH A . R 7 HOH 173 573 247 HOH HOH A . R 7 HOH 174 574 249 HOH HOH A . R 7 HOH 175 575 251 HOH HOH A . R 7 HOH 176 576 252 HOH HOH A . R 7 HOH 177 577 253 HOH HOH A . R 7 HOH 178 578 254 HOH HOH A . R 7 HOH 179 579 255 HOH HOH A . R 7 HOH 180 580 257 HOH HOH A . R 7 HOH 181 581 259 HOH HOH A . R 7 HOH 182 582 262 HOH HOH A . R 7 HOH 183 583 264 HOH HOH A . R 7 HOH 184 584 265 HOH HOH A . R 7 HOH 185 585 266 HOH HOH A . R 7 HOH 186 586 267 HOH HOH A . R 7 HOH 187 587 268 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 3 A MSE 2 ? MET SELENOMETHIONINE 3 A MSE 47 A MSE 46 ? MET SELENOMETHIONINE 4 A MSE 180 A MSE 179 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 115 ? A ASP 114 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 ND1 ? A HIS 168 ? A HIS 167 ? 1_555 91.9 ? 2 OD1 ? A ASP 115 ? A ASP 114 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O ? R HOH . ? A HOH 418 ? 1_555 99.2 ? 3 ND1 ? A HIS 168 ? A HIS 167 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O ? R HOH . ? A HOH 418 ? 1_555 94.0 ? 4 OD1 ? A ASP 115 ? A ASP 114 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 108 ? A HIS 107 ? 1_555 95.7 ? 5 ND1 ? A HIS 168 ? A HIS 167 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 108 ? A HIS 107 ? 1_555 101.5 ? 6 O ? R HOH . ? A HOH 418 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 108 ? A HIS 107 ? 1_555 158.1 ? 7 OD1 ? A ASP 115 ? A ASP 114 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 115 ? A ASP 114 ? 1_555 55.2 ? 8 ND1 ? A HIS 168 ? A HIS 167 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 115 ? A ASP 114 ? 1_555 147.1 ? 9 O ? R HOH . ? A HOH 418 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 115 ? A ASP 114 ? 1_555 92.2 ? 10 NE2 ? A HIS 108 ? A HIS 107 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 115 ? A ASP 114 ? 1_555 83.3 ? 11 OD1 ? A ASP 115 ? A ASP 114 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O2 ? D SO4 . ? A SO4 303 ? 1_555 151.7 ? 12 ND1 ? A HIS 168 ? A HIS 167 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O2 ? D SO4 . ? A SO4 303 ? 1_555 116.4 ? 13 O ? R HOH . ? A HOH 418 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O2 ? D SO4 . ? A SO4 303 ? 1_555 79.0 ? 14 NE2 ? A HIS 108 ? A HIS 107 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O2 ? D SO4 . ? A SO4 303 ? 1_555 80.2 ? 15 OD2 ? A ASP 115 ? A ASP 114 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O2 ? D SO4 . ? A SO4 303 ? 1_555 96.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-23 2 'Structure model' 1 1 2013-10-02 3 'Structure model' 1 2 2013-10-16 4 'Structure model' 1 3 2014-01-22 5 'Structure model' 1 4 2014-04-23 6 'Structure model' 1 5 2014-05-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' Other 4 5 'Structure model' 'Database references' 5 6 'Structure model' 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -13.4764 -13.8820 -18.1936 0.1352 0.1233 0.1346 -0.0144 0.0118 0.0325 0.3823 0.7702 1.4629 0.0117 0.5165 -0.0827 -0.0166 -0.3294 -0.2666 0.1715 0.0401 0.1086 0.1831 -0.0589 -0.0657 'X-RAY DIFFRACTION' 2 ? refined -17.2558 -5.3482 -31.1827 0.0502 0.0542 0.1032 -0.0142 -0.0138 0.0050 1.0575 1.6291 3.0137 -0.4240 -0.5374 0.7564 0.0413 -0.0201 0.0131 -0.0517 -0.0586 0.0985 0.0093 -0.1347 0.0057 'X-RAY DIFFRACTION' 3 ? refined -11.8754 3.1163 -23.7725 0.0715 0.0411 0.0841 -0.0035 0.0197 -0.0185 2.6162 2.2842 2.1523 -0.6600 -0.0608 -0.2919 0.0153 -0.0502 0.1704 -0.0675 0.0561 0.0946 -0.2049 -0.1041 -0.0282 'X-RAY DIFFRACTION' 4 ? refined -3.1852 -8.8349 -5.4101 0.1725 0.2656 0.0305 0.0405 -0.0385 0.0223 2.7849 3.8666 3.0980 0.4257 0.4265 -0.5094 -0.0539 -0.6402 -0.0715 0.7326 -0.0311 0.0969 0.2433 -0.0655 0.0156 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'chain A and resi 0:50' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain A and resi 51:116' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'chain A and resi 117:194' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'chain A and resi 195:250' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 PHENIX 'model building' '(phenix.autosol)' ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 PHENIX phasing ? ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O4 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SO4 _pdbx_validate_close_contact.auth_seq_id_1 303 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 483 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 121 ? ? -93.20 51.54 2 1 TYR A 131 ? ? -96.39 39.91 3 1 HIS A 163 ? ? -37.40 122.11 4 1 ASN A 200 ? ? -155.63 67.33 5 1 ASN A 200 ? ? -151.60 59.19 6 1 GLN A 206 ? ? -103.08 -79.85 7 1 ALA A 207 ? ? -177.20 105.97 8 1 HIS A 208 ? ? -26.39 117.57 9 1 ARG A 209 ? ? 56.21 -140.97 10 1 ASP A 222 ? ? -116.75 -96.12 11 1 ASN A 231 ? ? -78.69 39.66 12 1 ILE A 241 ? ? -127.26 -58.31 13 1 ASP A 242 ? ? -155.66 -0.20 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 251 ? A LYS 252 2 1 Y 1 A THR 252 ? A THR 253 3 1 Y 1 A ASP 253 ? A ASP 254 4 1 Y 1 A ASP 254 ? A ASP 255 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'CHLORIDE ION' CL 4 'SULFATE ION' SO4 5 1,2-ETHANEDIOL EDO 6 GLYCEROL GOL 7 water HOH #