HEADER TRANSFERASE 17-MAY-12 4F84 TITLE STRUCTURE ANALYSIS OF GERANYL DIPHOSPHATE METHYLTRANSFERASE IN COMPLEX TITLE 2 WITH SAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GERANYL DIPHOSPHATE 2-C-METHYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SAM DEPENDENT METHYLTRANSFERASE, GPP METHYLTRANSFERASE; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES LASALIENSIS; SOURCE 3 ORGANISM_TAXID: 324833; SOURCE 4 GENE: GDPMT; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET26B KEYWDS ALPHA/BETA, ROSSMANN FOLD, METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR O.ARIYAWUTTHIPHAN,T.OSE,A.MINAMI,Y.G.GAO,M.YAO,H.OIKAWA,I.TANAKA REVDAT 3 08-NOV-23 4F84 1 REMARK SEQADV REVDAT 2 07-AUG-13 4F84 1 JRNL REVDAT 1 31-OCT-12 4F84 0 JRNL AUTH O.ARIYAWUTTHIPHAN,T.OSE,A.MINAMI,S.SINDE,M.TSUDA,Y.-G.GAO, JRNL AUTH 2 M.YAO,H.OIKAWA,I.TANAKA JRNL TITL STRUCTURE ANALYSIS OF GERANYL PYROPHOSPHATE JRNL TITL 2 METHYLTRANSFERASE AND THE PROPOSED REACTION MECHANISM OF JRNL TITL 3 SAM-DEPENDENT C-METHYLATION JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 68 1558 2012 JRNL REFN ISSN 0907-4449 JRNL PMID 23090405 JRNL DOI 10.1107/S0907444912038486 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2284485.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 21970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.261 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1146 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2068 REMARK 3 BIN R VALUE (WORKING SET) : 0.5020 REMARK 3 BIN FREE R VALUE : 0.5080 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 104 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1937 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 15.41000 REMARK 3 B22 (A**2) : 15.41000 REMARK 3 B33 (A**2) : -30.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.46 REMARK 3 ESD FROM SIGMAA (A) : 0.70 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.50 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.73 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.030 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 46.98 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : SAM.PARAM REMARK 3 PARAMETER FILE 7 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : SAM.TOP REMARK 3 TOPOLOGY FILE 7 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 4F84 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072574. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22017 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.42400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3BUS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M AMMONIUM SUFLATE, 8% GLYCEROL, 0.1M REMARK 280 TRIS-HCL, 10MM SAM, PH 7.75, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.23350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.23350 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.23350 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.23350 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 33.23350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 33.23350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 147.94200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 73.97100 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 128.12153 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 73.97100 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 128.12153 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 33.23350 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 147.94200 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 33.23350 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 33.23350 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 SER A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 VAL A 8 REMARK 465 PRO A 9 REMARK 465 GLY A 10 REMARK 465 PRO A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 ALA A 14 REMARK 465 SER A 15 REMARK 465 SER A 16 REMARK 465 THR A 17 REMARK 465 ALA A 18 REMARK 465 ARG A 19 REMARK 465 GLY A 20 REMARK 465 ARG A 21 REMARK 465 ILE A 22 REMARK 465 PRO A 23 REMARK 465 ALA A 24 REMARK 465 PRO A 25 REMARK 465 ALA A 26 REMARK 465 THR A 27 REMARK 465 PRO A 28 REMARK 465 TYR A 29 REMARK 465 GLN A 30 REMARK 465 GLU A 31 REMARK 465 ASP A 32 REMARK 465 ILE A 33 REMARK 465 ALA A 34 REMARK 465 ARG A 35 REMARK 465 TYR A 36 REMARK 465 TRP A 37 REMARK 465 ASN A 38 REMARK 465 ASN A 39 REMARK 465 GLU A 40 REMARK 465 ALA A 41 REMARK 465 ARG A 42 REMARK 465 PRO A 43 REMARK 465 VAL A 44 REMARK 465 ASN A 45 REMARK 465 LEU A 46 REMARK 465 ARG A 47 REMARK 465 LEU A 48 REMARK 465 GLY A 49 REMARK 465 ASP A 50 REMARK 465 VAL A 51 REMARK 465 ASP A 52 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 55 -74.20 -128.39 REMARK 500 PRO A 72 5.24 -66.46 REMARK 500 HIS A 156 -38.73 -139.13 REMARK 500 GLN A 218 161.18 -41.26 REMARK 500 LEU A 273 -8.60 -58.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SAM A 501 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F85 RELATED DB: PDB REMARK 900 RELATED ID: 4F86 RELATED DB: PDB DBREF 4F84 A 1 300 UNP D3KYU3 GPPMT_STRLS 1 300 SEQADV 4F84 MET A -19 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 GLY A -18 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 SER A -17 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 SER A -16 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 HIS A -15 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 HIS A -14 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 HIS A -13 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 HIS A -12 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 HIS A -11 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 HIS A -10 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 SER A -9 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 SER A -8 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 GLY A -7 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 LEU A -6 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 VAL A -5 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 PRO A -4 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 ARG A -3 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 GLY A -2 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 SER A -1 UNP D3KYU3 EXPRESSION TAG SEQADV 4F84 HIS A 0 UNP D3KYU3 EXPRESSION TAG SEQRES 1 A 320 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 320 LEU VAL PRO ARG GLY SER HIS MET ALA ALA ALA SER ALA SEQRES 3 A 320 PRO VAL PRO GLY PRO GLY GLY ALA SER SER THR ALA ARG SEQRES 4 A 320 GLY ARG ILE PRO ALA PRO ALA THR PRO TYR GLN GLU ASP SEQRES 5 A 320 ILE ALA ARG TYR TRP ASN ASN GLU ALA ARG PRO VAL ASN SEQRES 6 A 320 LEU ARG LEU GLY ASP VAL ASP GLY LEU TYR HIS HIS HIS SEQRES 7 A 320 TYR GLY ILE GLY ALA VAL ASP HIS ALA ALA LEU GLY ASP SEQRES 8 A 320 PRO GLY ASP GLY GLY TYR GLU ALA ARG LEU ILE ALA GLU SEQRES 9 A 320 LEU HIS ARG LEU GLU SER ALA GLN ALA GLU PHE LEU LEU SEQRES 10 A 320 ASP HIS LEU GLY PRO VAL GLY PRO GLY ASP THR LEU VAL SEQRES 11 A 320 ASP ALA GLY CYS GLY ARG GLY GLY SER MET VAL MET ALA SEQRES 12 A 320 HIS GLN ARG PHE GLY CYS LYS VAL GLU GLY VAL THR LEU SEQRES 13 A 320 SER ALA ALA GLN ALA GLU PHE GLY ASN ARG ARG ALA ARG SEQRES 14 A 320 GLU LEU GLY ILE ASP ASP HIS VAL ARG SER ARG VAL CYS SEQRES 15 A 320 ASN MET LEU ASP THR PRO PHE GLU LYS GLY THR VAL ALA SEQRES 16 A 320 ALA SER TRP ASN ASN GLU SER SER MET TYR VAL ASP LEU SEQRES 17 A 320 HIS ASP VAL PHE ALA GLU HIS SER ARG PHE LEU ARG VAL SEQRES 18 A 320 GLY GLY ARG TYR VAL THR VAL THR GLY CYS TRP ASN PRO SEQRES 19 A 320 ARG TYR GLY GLN PRO SER LYS TRP VAL SER GLN ILE ASN SEQRES 20 A 320 ALA HIS PHE GLU CYS ASN ILE HIS SER ARG ARG GLU TYR SEQRES 21 A 320 LEU ARG ALA MET ALA ASP ASN ARG LEU VAL PRO GLN THR SEQRES 22 A 320 VAL VAL ASP LEU THR PRO GLU THR LEU PRO TYR TRP GLU SEQRES 23 A 320 LEU ARG ALA THR SER SER LEU VAL THR GLY ILE GLU GLU SEQRES 24 A 320 ALA PHE ILE GLU SER TYR ARG ASP GLY SER PHE GLN TYR SEQRES 25 A 320 VAL LEU ILE ALA ALA ASP ARG VAL HET SAM A 501 20 HETNAM SAM S-ADENOSYLMETHIONINE FORMUL 2 SAM C15 H22 N6 O5 S FORMUL 3 HOH *6(H2 O) HELIX 1 1 ASP A 65 GLY A 70 1 6 HELIX 2 2 GLY A 76 ASP A 98 1 23 HELIX 3 3 GLY A 117 GLY A 128 1 12 HELIX 4 4 SER A 137 GLY A 152 1 16 HELIX 5 5 SER A 182 VAL A 186 5 5 HELIX 6 6 ASP A 187 PHE A 198 1 12 HELIX 7 7 PRO A 214 GLY A 217 5 4 HELIX 8 8 SER A 220 GLU A 231 1 12 HELIX 9 9 SER A 236 ASN A 247 1 12 HELIX 10 10 LEU A 257 ALA A 269 1 13 HELIX 11 11 ILE A 277 GLY A 288 1 12 SHEET 1 A 7 VAL A 157 VAL A 161 0 SHEET 2 A 7 LYS A 130 THR A 135 1 N GLY A 133 O ARG A 158 SHEET 3 A 7 THR A 108 ALA A 112 1 N LEU A 109 O GLU A 132 SHEET 4 A 7 VAL A 174 ASN A 180 1 O TRP A 178 N ALA A 112 SHEET 5 A 7 LEU A 199 TRP A 212 1 O ARG A 200 N VAL A 174 SHEET 6 A 7 PHE A 290 ARG A 299 -1 O ALA A 297 N TYR A 205 SHEET 7 A 7 LEU A 249 ASP A 256 -1 N GLN A 252 O ALA A 296 SITE 1 AC1 13 HIS A 57 GLY A 113 GLY A 115 THR A 135 SITE 2 AC1 13 LEU A 136 GLN A 140 CYS A 162 ASN A 163 SITE 3 AC1 13 MET A 164 GLU A 181 SER A 182 TYR A 185 SITE 4 AC1 13 VAL A 186 CRYST1 147.942 147.942 66.467 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006759 0.003903 0.000000 0.00000 SCALE2 0.000000 0.007805 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015045 0.00000