HEADER ANTIMICROBIAL PROTEIN, VIRAL PROTEIN 17-MAY-12 4F87 TITLE X-RAY CRYSTAL STRUCTURE OF PLYCB COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLYCB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PHAGE C1; SOURCE 3 ORGANISM_TAXID: 230871; SOURCE 4 GENE: ORF9; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LYSIN, BACTERIOPHAGE, ANTIMICROBIAL PROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.MCGOWAN,A.M.BUCKLE,V.A.FISCHETTI,D.C.NELSON,J.C.WHISSTOCK REVDAT 4 28-FEB-24 4F87 1 REMARK REVDAT 3 15-AUG-12 4F87 1 JRNL REVDAT 2 01-AUG-12 4F87 1 JRNL REVDAT 1 25-JUL-12 4F87 0 JRNL AUTH S.MCGOWAN,A.M.BUCKLE,M.S.MITCHELL,J.T.HOOPES,D.T.GALLAGHER, JRNL AUTH 2 R.D.HESELPOTH,Y.SHEN,C.F.REBOUL,R.H.LAW,V.A.FISCHETTI, JRNL AUTH 3 J.C.WHISSTOCK,D.C.NELSON JRNL TITL X-RAY CRYSTAL STRUCTURE OF THE STREPTOCOCCAL SPECIFIC PHAGE JRNL TITL 2 LYSIN PLYC. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 12752 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22807482 JRNL DOI 10.1073/PNAS.1208424109 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 71843 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 3682 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5203 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2034 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4958 REMARK 3 BIN R VALUE (WORKING SET) : 0.2023 REMARK 3 BIN FREE R VALUE : 0.2268 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.71 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 245 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1864 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 373 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.179 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1941 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2623 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 680 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 48 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 295 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1927 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 271 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2669 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.10 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.49 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.12 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: A 10 A 70 REMARK 3 ORIGIN FOR THE GROUP (A): 22.7174 -13.0471 45.5995 REMARK 3 T TENSOR REMARK 3 T11: -0.0423 T22: -0.0357 REMARK 3 T33: 0.0423 T12: 0.0121 REMARK 3 T13: 0.0004 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.8704 L22: 2.2724 REMARK 3 L33: 0.4155 L12: 1.2362 REMARK 3 L13: -0.0233 L23: 0.2074 REMARK 3 S TENSOR REMARK 3 S11: -0.0458 S12: 0.0634 S13: 0.0487 REMARK 3 S21: -0.0699 S22: 0.0479 S23: 0.0691 REMARK 3 S31: -0.0168 S32: 0.0072 S33: -0.0021 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: B 9 B 70 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9403 22.5000 45.4249 REMARK 3 T TENSOR REMARK 3 T11: -0.0389 T22: -0.0435 REMARK 3 T33: 0.0425 T12: -0.0128 REMARK 3 T13: -0.0037 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.2400 L22: 0.9739 REMARK 3 L33: 0.4169 L12: -1.2727 REMARK 3 L13: -0.2567 L23: -0.0031 REMARK 3 S TENSOR REMARK 3 S11: 0.0483 S12: 0.0735 S13: -0.0780 REMARK 3 S21: -0.0707 S22: -0.0508 S23: 0.0558 REMARK 3 S31: -0.0096 S32: -0.0189 S33: 0.0026 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: C 9 C 70 REMARK 3 ORIGIN FOR THE GROUP (A): 24.9043 6.8041 45.3980 REMARK 3 T TENSOR REMARK 3 T11: -0.0454 T22: -0.0266 REMARK 3 T33: 0.0346 T12: -0.0029 REMARK 3 T13: -0.0128 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.4660 L22: 2.8457 REMARK 3 L33: 0.3420 L12: -0.4503 REMARK 3 L13: -0.4452 L23: 0.2328 REMARK 3 S TENSOR REMARK 3 S11: -0.0465 S12: 0.0261 S13: -0.0540 REMARK 3 S21: -0.1407 S22: 0.0338 S23: 0.1124 REMARK 3 S31: -0.0112 S32: 0.0046 S33: 0.0127 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: D 9 D 70 REMARK 3 ORIGIN FOR THE GROUP (A): -6.9062 24.9311 45.3680 REMARK 3 T TENSOR REMARK 3 T11: -0.0291 T22: -0.0474 REMARK 3 T33: 0.0323 T12: 0.0027 REMARK 3 T13: 0.0112 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 2.9381 L22: 0.4343 REMARK 3 L33: 0.3902 L12: 0.4536 REMARK 3 L13: -0.2445 L23: -0.4683 REMARK 3 S TENSOR REMARK 3 S11: 0.0341 S12: 0.1465 S13: -0.1058 REMARK 3 S21: -0.0308 S22: -0.0432 S23: -0.0580 REMARK 3 S31: -0.0060 S32: -0.0140 S33: 0.0090 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4F87 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-06; 17-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N REMARK 200 RADIATION SOURCE : APS; ROTATING ANODE REMARK 200 BEAMLINE : 17-BM; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4; 1.5418 REMARK 200 MONOCHROMATOR : SI(111); OSMIC MIRRORS REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R; RIGAKU RAXIS REMARK 200 IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71861 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: S-SAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% MPD, 0.1 M HEPES, 0.2 M SODIUM REMARK 280 CITRATE, PH 6.0, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.48400 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 65.48400 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 65.48400 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 65.48400 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 65.48400 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 65.48400 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 65.48400 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 65.48400 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 65.48400 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 65.48400 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 65.48400 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 65.48400 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 65.48400 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 65.48400 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 65.48400 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 65.48400 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 65.48400 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 65.48400 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 65.48400 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 65.48400 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 65.48400 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 65.48400 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 65.48400 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 65.48400 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 65.48400 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 65.48400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -116.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 LYS A 2 REMARK 465 ILE A 3 REMARK 465 ASN A 4 REMARK 465 VAL A 5 REMARK 465 ASN A 6 REMARK 465 VAL A 7 REMARK 465 GLU A 8 REMARK 465 ASN A 9 REMARK 465 LYS A 71 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 LYS B 2 REMARK 465 ILE B 3 REMARK 465 ASN B 4 REMARK 465 VAL B 5 REMARK 465 ASN B 6 REMARK 465 VAL B 7 REMARK 465 GLU B 8 REMARK 465 LYS B 71 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 LYS C 2 REMARK 465 ILE C 3 REMARK 465 ASN C 4 REMARK 465 VAL C 5 REMARK 465 ASN C 6 REMARK 465 VAL C 7 REMARK 465 GLU C 8 REMARK 465 LYS C 71 REMARK 465 MET D 0 REMARK 465 SER D 1 REMARK 465 LYS D 2 REMARK 465 ILE D 3 REMARK 465 ASN D 4 REMARK 465 VAL D 5 REMARK 465 ASN D 6 REMARK 465 VAL D 7 REMARK 465 GLU D 8 REMARK 465 LYS D 71 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 10 CG1 CG2 REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 LYS A 67 CE NZ REMARK 470 LYS A 70 CD CE NZ REMARK 470 ASN B 9 CG OD1 ND2 REMARK 470 VAL B 10 CG1 CG2 REMARK 470 LYS B 23 CD CE NZ REMARK 470 GLU B 24 CG CD OE1 OE2 REMARK 470 LYS B 70 CE NZ REMARK 470 ASN C 9 CG OD1 ND2 REMARK 470 LYS C 23 CG CD CE NZ REMARK 470 GLU C 24 OE1 OE2 REMARK 470 GLU C 63 OE2 REMARK 470 LYS C 67 CD CE NZ REMARK 470 LYS C 70 CD CE NZ REMARK 470 ASN D 9 CG OD1 ND2 REMARK 470 LYS D 23 CG CD CE NZ REMARK 470 GLU D 24 CD OE1 OE2 REMARK 470 LYS D 67 CE NZ REMARK 470 LYS D 70 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP D 41 O HOH D 294 1.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 177 O HOH B 243 22545 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD D 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F88 RELATED DB: PDB DBREF 4F87 A 0 71 UNP Q7Y3F3 Q7Y3F3_9CAUD 1 72 DBREF 4F87 B 0 71 UNP Q7Y3F3 Q7Y3F3_9CAUD 1 72 DBREF 4F87 C 0 71 UNP Q7Y3F3 Q7Y3F3_9CAUD 1 72 DBREF 4F87 D 0 71 UNP Q7Y3F3 Q7Y3F3_9CAUD 1 72 SEQRES 1 A 72 MET SER LYS ILE ASN VAL ASN VAL GLU ASN VAL SER GLY SEQRES 2 A 72 VAL GLN GLY PHE LEU PHE HIS THR ASP GLY LYS GLU SER SEQRES 3 A 72 TYR GLY TYR ARG ALA PHE ILE ASN GLY VAL GLU ILE GLY SEQRES 4 A 72 ILE LYS ASP ILE GLU THR VAL GLN GLY PHE GLN GLN ILE SEQRES 5 A 72 ILE PRO SER ILE ASN ILE SER LYS SER ASP VAL GLU ALA SEQRES 6 A 72 ILE ARG LYS ALA MET LYS LYS SEQRES 1 B 72 MET SER LYS ILE ASN VAL ASN VAL GLU ASN VAL SER GLY SEQRES 2 B 72 VAL GLN GLY PHE LEU PHE HIS THR ASP GLY LYS GLU SER SEQRES 3 B 72 TYR GLY TYR ARG ALA PHE ILE ASN GLY VAL GLU ILE GLY SEQRES 4 B 72 ILE LYS ASP ILE GLU THR VAL GLN GLY PHE GLN GLN ILE SEQRES 5 B 72 ILE PRO SER ILE ASN ILE SER LYS SER ASP VAL GLU ALA SEQRES 6 B 72 ILE ARG LYS ALA MET LYS LYS SEQRES 1 C 72 MET SER LYS ILE ASN VAL ASN VAL GLU ASN VAL SER GLY SEQRES 2 C 72 VAL GLN GLY PHE LEU PHE HIS THR ASP GLY LYS GLU SER SEQRES 3 C 72 TYR GLY TYR ARG ALA PHE ILE ASN GLY VAL GLU ILE GLY SEQRES 4 C 72 ILE LYS ASP ILE GLU THR VAL GLN GLY PHE GLN GLN ILE SEQRES 5 C 72 ILE PRO SER ILE ASN ILE SER LYS SER ASP VAL GLU ALA SEQRES 6 C 72 ILE ARG LYS ALA MET LYS LYS SEQRES 1 D 72 MET SER LYS ILE ASN VAL ASN VAL GLU ASN VAL SER GLY SEQRES 2 D 72 VAL GLN GLY PHE LEU PHE HIS THR ASP GLY LYS GLU SER SEQRES 3 D 72 TYR GLY TYR ARG ALA PHE ILE ASN GLY VAL GLU ILE GLY SEQRES 4 D 72 ILE LYS ASP ILE GLU THR VAL GLN GLY PHE GLN GLN ILE SEQRES 5 D 72 ILE PRO SER ILE ASN ILE SER LYS SER ASP VAL GLU ALA SEQRES 6 D 72 ILE ARG LYS ALA MET LYS LYS HET MRD B 101 8 HET MPD D 101 8 HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 5 MRD C6 H14 O2 FORMUL 6 MPD C6 H14 O2 FORMUL 7 HOH *373(H2 O) HELIX 1 1 ASP A 41 GLN A 50 1 10 HELIX 2 2 SER A 58 SER A 60 5 3 HELIX 3 3 ASP A 61 LYS A 70 1 10 HELIX 4 4 ASP B 41 GLN B 50 1 10 HELIX 5 5 SER B 58 SER B 60 5 3 HELIX 6 6 ASP B 61 LYS B 70 1 10 HELIX 7 7 ASP C 41 GLN C 49 1 9 HELIX 8 8 SER C 58 SER C 60 5 3 HELIX 9 9 ASP C 61 LYS C 70 1 10 HELIX 10 10 ASP D 41 GLN D 49 1 9 HELIX 11 11 SER D 58 SER D 60 5 3 HELIX 12 12 ASP D 61 LYS D 70 1 10 SHEET 1 A 4 VAL A 35 ILE A 39 0 SHEET 2 A 4 TYR A 28 ILE A 32 -1 N ILE A 32 O VAL A 35 SHEET 3 A 4 GLY A 15 HIS A 19 -1 N PHE A 18 O ARG A 29 SHEET 4 A 4 SER A 54 ASN A 56 1 O ILE A 55 N LEU A 17 SHEET 1 B 4 VAL B 35 ILE B 39 0 SHEET 2 B 4 TYR B 28 ILE B 32 -1 N ALA B 30 O ILE B 37 SHEET 3 B 4 GLY B 15 HIS B 19 -1 N PHE B 18 O ARG B 29 SHEET 4 B 4 SER B 54 ASN B 56 1 O ILE B 55 N LEU B 17 SHEET 1 C 4 VAL C 35 ILE C 39 0 SHEET 2 C 4 TYR C 28 ILE C 32 -1 N ILE C 32 O VAL C 35 SHEET 3 C 4 GLY C 15 HIS C 19 -1 N PHE C 18 O ARG C 29 SHEET 4 C 4 SER C 54 ASN C 56 1 O ILE C 55 N LEU C 17 SHEET 1 D 4 VAL D 35 ILE D 39 0 SHEET 2 D 4 TYR D 28 ILE D 32 -1 N ILE D 32 O VAL D 35 SHEET 3 D 4 GLY D 15 HIS D 19 -1 N PHE D 18 O ARG D 29 SHEET 4 D 4 SER D 54 ASN D 56 1 O ILE D 55 N LEU D 17 SITE 1 AC1 9 GLY A 27 TYR A 28 ILE A 39 LYS A 40 SITE 2 AC1 9 ASP A 41 ILE A 42 THR B 20 SER B 25 SITE 3 AC1 9 HOH B 280 SITE 1 AC2 10 TYR C 28 LYS C 40 HOH C 101 HOH C 117 SITE 2 AC2 10 HOH C 188 TYR D 28 LYS D 40 ILE D 42 SITE 3 AC2 10 HOH D 202 HOH D 226 CRYST1 130.968 130.968 130.968 90.00 90.00 90.00 I 2 3 96 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007635 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007635 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007635 0.00000