HEADER TRANSFERASE/DNA 17-MAY-12 4F8R TITLE BACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: UNP RESIDUES 287-898; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DDG))-3'); COMPND 10 CHAIN: B, E; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: DNA PRIMER STRAND; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'-D(*CP*AP*TP*TP*CP*GP*AP*GP*TP*CP*AP*GP*G)-3'); COMPND 15 CHAIN: C, F; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: DNA TEMPLATE STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS KAUSTOPHILUS; SOURCE 3 ORGANISM_TAXID: 235909; SOURCE 4 STRAIN: HTA426; SOURCE 5 GENE: POLA, GK2730; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS DNA POLYMERASE I, CLOSED FORM, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.WANG,L.S.BEESE REVDAT 3 13-SEP-23 4F8R 1 REMARK SEQADV LINK REVDAT 2 07-MAY-14 4F8R 1 REMARK REVDAT 1 07-AUG-13 4F8R 0 JRNL AUTH W.WANG,H.W.HELLINGA,L.S.BEESE JRNL TITL STRUCTURES OF A HIGH-FIDELITY DNA POLYMERASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.WANG,H.W.HELLINGA,L.S.BEESE REMARK 1 TITL STRUCTURAL EVIDENCE FOR THE RARE TAUTOMER HYPOTHESIS OF REMARK 1 TITL 2 SPONTANEOUS MUTAGENESIS. REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 108 17644 2011 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 22006298 REMARK 1 DOI 10.1073/PNAS.1114496108 REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1026 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.7 REMARK 3 NUMBER OF REFLECTIONS : 165495 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.520 REMARK 3 FREE R VALUE TEST SET COUNT : 7474 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.9870 - 5.0886 0.97 6188 320 0.2027 0.2009 REMARK 3 2 5.0886 - 4.0418 1.00 6127 321 0.1523 0.1770 REMARK 3 3 4.0418 - 3.5317 0.99 6023 310 0.1636 0.1789 REMARK 3 4 3.5317 - 3.2092 1.00 6024 312 0.1693 0.1972 REMARK 3 5 3.2092 - 2.9794 1.00 6052 302 0.1913 0.2074 REMARK 3 6 2.9794 - 2.8038 1.00 6010 282 0.1926 0.2282 REMARK 3 7 2.8038 - 2.6635 0.99 6009 259 0.1913 0.2045 REMARK 3 8 2.6635 - 2.5476 0.99 6035 255 0.1786 0.1907 REMARK 3 9 2.5476 - 2.4496 0.99 5995 249 0.1741 0.2020 REMARK 3 10 2.4496 - 2.3651 0.99 6007 241 0.1733 0.1958 REMARK 3 11 2.3651 - 2.2911 0.99 5966 234 0.1710 0.1985 REMARK 3 12 2.2911 - 2.2257 0.86 1190 38 0.1667 0.1844 REMARK 3 13 2.2257 - 2.1671 0.96 5292 251 0.1768 0.2069 REMARK 3 14 2.1671 - 2.1142 0.99 5969 241 0.1737 0.1910 REMARK 3 15 2.1142 - 2.0662 0.99 5934 235 0.1761 0.1879 REMARK 3 16 2.0662 - 2.0222 0.99 5966 210 0.1834 0.2140 REMARK 3 17 2.0222 - 1.9818 0.98 5921 186 0.1859 0.2069 REMARK 3 18 1.9818 - 1.9444 0.91 5396 285 0.1946 0.2384 REMARK 3 19 1.9097 - 1.8773 0.85 1860 98 0.1971 0.2323 REMARK 3 20 1.8773 - 1.8470 0.94 5556 293 0.1929 0.2467 REMARK 3 21 1.8470 - 1.8186 0.94 5601 294 0.1993 0.2505 REMARK 3 22 1.8186 - 1.7919 0.94 5570 294 0.1933 0.2194 REMARK 3 23 1.7919 - 1.7666 0.94 5529 291 0.1989 0.2463 REMARK 3 24 1.7666 - 1.7427 0.93 5538 291 0.2041 0.2448 REMARK 3 25 1.7427 - 1.7201 0.91 5357 282 0.2047 0.2515 REMARK 3 26 1.7201 - 1.6986 0.90 5382 283 0.2116 0.2403 REMARK 3 27 1.6986 - 1.6782 0.89 5235 276 0.2224 0.2423 REMARK 3 28 1.6782 - 1.6586 0.88 5187 273 0.2307 0.2662 REMARK 3 29 1.6586 - 1.6400 0.86 5102 268 0.2411 0.2607 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 10321 REMARK 3 ANGLE : 1.384 14141 REMARK 3 CHIRALITY : 0.076 1580 REMARK 3 PLANARITY : 0.007 1697 REMARK 3 DIHEDRAL : 15.346 3986 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 298:467) REMARK 3 ORIGIN FOR THE GROUP (A): 117.8167 -56.7700 22.2032 REMARK 3 T TENSOR REMARK 3 T11: 0.4889 T22: 0.2506 REMARK 3 T33: 0.2228 T12: 0.0919 REMARK 3 T13: 0.0081 T23: 0.0658 REMARK 3 L TENSOR REMARK 3 L11: 1.9551 L22: 2.4730 REMARK 3 L33: 2.8459 L12: 1.1634 REMARK 3 L13: 0.0958 L23: 1.1169 REMARK 3 S TENSOR REMARK 3 S11: 0.0086 S12: 0.2536 S13: -0.1677 REMARK 3 S21: 0.3732 S22: 0.1172 S23: 0.1706 REMARK 3 S31: 0.7252 S32: 0.0871 S33: -0.1312 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 468:604) REMARK 3 ORIGIN FOR THE GROUP (A): 109.7150 -29.7728 47.9337 REMARK 3 T TENSOR REMARK 3 T11: 0.2996 T22: 0.2222 REMARK 3 T33: 0.2252 T12: -0.0364 REMARK 3 T13: 0.0163 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.7964 L22: 1.6825 REMARK 3 L33: 1.8193 L12: -0.6509 REMARK 3 L13: -0.4758 L23: 0.4325 REMARK 3 S TENSOR REMARK 3 S11: -0.1463 S12: -0.2586 S13: 0.0241 REMARK 3 S21: 0.4718 S22: 0.0969 S23: 0.1841 REMARK 3 S31: 0.1493 S32: 0.0858 S33: 0.0439 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 605:876) REMARK 3 ORIGIN FOR THE GROUP (A): 130.1055 -26.7295 37.7724 REMARK 3 T TENSOR REMARK 3 T11: 0.1979 T22: 0.4731 REMARK 3 T33: 0.1732 T12: 0.0013 REMARK 3 T13: -0.0574 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 1.0784 L22: 2.1085 REMARK 3 L33: 2.5256 L12: 0.0173 REMARK 3 L13: -0.6928 L23: -0.0102 REMARK 3 S TENSOR REMARK 3 S11: -0.0043 S12: -0.4474 S13: 0.1204 REMARK 3 S21: 0.2979 S22: 0.0954 S23: -0.3029 REMARK 3 S31: -0.0694 S32: 0.5888 S33: -0.0776 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 298:467) REMARK 3 ORIGIN FOR THE GROUP (A): 137.6886 -47.8752 -9.2180 REMARK 3 T TENSOR REMARK 3 T11: 0.1224 T22: 0.0881 REMARK 3 T33: 0.1413 T12: 0.0194 REMARK 3 T13: -0.0186 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 2.2093 L22: 1.9288 REMARK 3 L33: 1.8994 L12: -0.4985 REMARK 3 L13: 0.5648 L23: 0.6323 REMARK 3 S TENSOR REMARK 3 S11: 0.1248 S12: 0.0685 S13: -0.3341 REMARK 3 S21: -0.0879 S22: 0.0098 S23: -0.0259 REMARK 3 S31: 0.2439 S32: 0.1348 S33: -0.1078 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 468:522) REMARK 3 ORIGIN FOR THE GROUP (A): 118.8597 -28.7735 -23.9845 REMARK 3 T TENSOR REMARK 3 T11: 0.1325 T22: 0.1778 REMARK 3 T33: 0.1140 T12: 0.0044 REMARK 3 T13: -0.0214 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.1912 L22: 1.3889 REMARK 3 L33: 0.1909 L12: 0.7866 REMARK 3 L13: -0.6949 L23: -0.1181 REMARK 3 S TENSOR REMARK 3 S11: -0.0844 S12: 0.3343 S13: 0.0778 REMARK 3 S21: -0.3767 S22: 0.2642 S23: 0.2117 REMARK 3 S31: 0.1235 S32: -0.3467 S33: -0.1887 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 523:586) REMARK 3 ORIGIN FOR THE GROUP (A): 126.6964 -7.6945 -37.3820 REMARK 3 T TENSOR REMARK 3 T11: 0.3297 T22: 0.2094 REMARK 3 T33: 0.2107 T12: -0.0265 REMARK 3 T13: 0.0310 T23: 0.0704 REMARK 3 L TENSOR REMARK 3 L11: 1.0976 L22: 3.5066 REMARK 3 L33: 1.2808 L12: 0.9696 REMARK 3 L13: 0.2878 L23: 0.3278 REMARK 3 S TENSOR REMARK 3 S11: -0.1234 S12: 0.1096 S13: 0.0301 REMARK 3 S21: -0.3076 S22: 0.1584 S23: -0.2171 REMARK 3 S31: 0.0422 S32: -0.1554 S33: -0.0582 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 587:666) REMARK 3 ORIGIN FOR THE GROUP (A): 116.6825 -28.5206 -18.9825 REMARK 3 T TENSOR REMARK 3 T11: 0.0914 T22: 0.1039 REMARK 3 T33: 0.1130 T12: -0.0019 REMARK 3 T13: -0.0089 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 1.4531 L22: 1.2440 REMARK 3 L33: 2.0138 L12: 0.3013 REMARK 3 L13: 0.2338 L23: 0.9627 REMARK 3 S TENSOR REMARK 3 S11: -0.0391 S12: 0.2551 S13: 0.0742 REMARK 3 S21: -0.1841 S22: -0.0574 S23: 0.1409 REMARK 3 S31: -0.0729 S32: -0.0717 S33: 0.0843 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 667:743) REMARK 3 ORIGIN FOR THE GROUP (A): 119.5879 -2.1358 -7.3441 REMARK 3 T TENSOR REMARK 3 T11: 0.2430 T22: 0.2317 REMARK 3 T33: 0.3500 T12: 0.0321 REMARK 3 T13: 0.0259 T23: 0.0921 REMARK 3 L TENSOR REMARK 3 L11: 3.2487 L22: 2.0656 REMARK 3 L33: 4.3517 L12: 1.6915 REMARK 3 L13: -3.0042 L23: -1.5951 REMARK 3 S TENSOR REMARK 3 S11: 0.0488 S12: 0.5860 S13: 0.7007 REMARK 3 S21: -0.1924 S22: 0.0850 S23: -0.0247 REMARK 3 S31: -0.4326 S32: -0.3696 S33: -0.1644 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 744:876) REMARK 3 ORIGIN FOR THE GROUP (A): 119.6339 -23.4079 -5.1054 REMARK 3 T TENSOR REMARK 3 T11: 0.0731 T22: 0.0651 REMARK 3 T33: 0.0995 T12: 0.0068 REMARK 3 T13: -0.0015 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.9301 L22: 1.0966 REMARK 3 L33: 1.5358 L12: 0.3866 REMARK 3 L13: 0.5836 L23: 0.8665 REMARK 3 S TENSOR REMARK 3 S11: -0.0560 S12: 0.0410 S13: 0.2114 REMARK 3 S21: -0.0462 S22: -0.0236 S23: 0.0847 REMARK 3 S31: -0.0886 S32: -0.0262 S33: 0.0727 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 21:29) REMARK 3 ORIGIN FOR THE GROUP (A): 108.8162 -27.9965 39.8769 REMARK 3 T TENSOR REMARK 3 T11: 0.3065 T22: 0.1808 REMARK 3 T33: 0.3246 T12: -0.0155 REMARK 3 T13: -0.0638 T23: -0.0856 REMARK 3 L TENSOR REMARK 3 L11: 8.8697 L22: 1.9849 REMARK 3 L33: 3.3405 L12: -1.6243 REMARK 3 L13: 0.3108 L23: -1.9199 REMARK 3 S TENSOR REMARK 3 S11: -0.4497 S12: 0.0427 S13: 0.0689 REMARK 3 S21: -0.1262 S22: 0.1348 S23: 0.5406 REMARK 3 S31: 0.1180 S32: -0.2543 S33: 0.3155 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 2:12) REMARK 3 ORIGIN FOR THE GROUP (A): 109.3755 -27.9768 37.7627 REMARK 3 T TENSOR REMARK 3 T11: 0.2320 T22: 0.2494 REMARK 3 T33: 0.2174 T12: 0.0208 REMARK 3 T13: -0.0416 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 4.0273 L22: 5.0432 REMARK 3 L33: 1.9311 L12: 2.5474 REMARK 3 L13: -1.3087 L23: -0.4495 REMARK 3 S TENSOR REMARK 3 S11: -0.0092 S12: -0.2567 S13: 0.3218 REMARK 3 S21: -0.3039 S22: -0.1754 S23: 0.5856 REMARK 3 S31: -0.0917 S32: -0.0328 S33: 0.1757 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'E' AND (RESSEQ 21:29) REMARK 3 ORIGIN FOR THE GROUP (A): 129.5744 -18.4493 -26.6957 REMARK 3 T TENSOR REMARK 3 T11: 0.2391 T22: 0.1723 REMARK 3 T33: 0.4420 T12: 0.0461 REMARK 3 T13: 0.0607 T23: 0.0856 REMARK 3 L TENSOR REMARK 3 L11: 5.6761 L22: 1.2166 REMARK 3 L33: 4.0157 L12: 0.9959 REMARK 3 L13: -3.5302 L23: -0.1741 REMARK 3 S TENSOR REMARK 3 S11: 0.1247 S12: 0.5669 S13: 0.8875 REMARK 3 S21: -0.2811 S22: 0.1871 S23: -0.3701 REMARK 3 S31: 0.0369 S32: -0.0394 S33: -0.2684 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'F' AND (RESSEQ 1:12) REMARK 3 ORIGIN FOR THE GROUP (A): 131.3143 -17.2818 -24.1218 REMARK 3 T TENSOR REMARK 3 T11: 0.2401 T22: 0.2080 REMARK 3 T33: 0.3025 T12: -0.0283 REMARK 3 T13: 0.0990 T23: 0.0356 REMARK 3 L TENSOR REMARK 3 L11: 1.3111 L22: 1.6076 REMARK 3 L33: 2.7175 L12: -0.9674 REMARK 3 L13: -0.9442 L23: -0.7891 REMARK 3 S TENSOR REMARK 3 S11: 0.2140 S12: 0.2192 S13: 0.4760 REMARK 3 S21: -0.3004 S22: -0.0338 S23: -0.6063 REMARK 3 S31: -0.4741 S32: -0.0070 S33: -0.1674 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4F8R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 172238 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.1900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2HVI WITH INSERTION SITE BASE PAIR, REMARK 200 METAL IONS, AND PROTEIN RESIDUES 681-721 DELETED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 48%-54% SATURATED AMMONIUM SULFATE, REMARK 280 2.5% MPD, 10MM MGSO4, 100MM MES, PH 5.8, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.83500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.19500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.68500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.19500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.83500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.68500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 285 REMARK 465 GLU A 286 REMARK 465 SER A 287 REMARK 465 PRO A 288 REMARK 465 SER A 289 REMARK 465 SER A 290 REMARK 465 GLU A 291 REMARK 465 GLU A 292 REMARK 465 GLU A 293 REMARK 465 LYS A 294 REMARK 465 PRO A 295 REMARK 465 LEU A 296 REMARK 465 ALA A 297 REMARK 465 MET D 285 REMARK 465 GLU D 286 REMARK 465 SER D 287 REMARK 465 PRO D 288 REMARK 465 SER D 289 REMARK 465 SER D 290 REMARK 465 GLU D 291 REMARK 465 GLU D 292 REMARK 465 GLU D 293 REMARK 465 LYS D 294 REMARK 465 PRO D 295 REMARK 465 LEU D 296 REMARK 465 ALA D 297 REMARK 465 HIS D 682 REMARK 465 THR D 683 REMARK 465 LYS D 684 REMARK 465 THR D 685 REMARK 465 ALA D 686 REMARK 465 MET D 687 REMARK 465 ASP D 688 REMARK 465 ILE D 689 REMARK 465 PHE D 690 REMARK 465 GLN D 691 REMARK 465 VAL D 692 REMARK 465 SER D 693 REMARK 465 GLU D 694 REMARK 465 ASP D 695 REMARK 465 GLU D 696 REMARK 465 VAL D 697 REMARK 465 THR D 698 REMARK 465 PRO D 699 REMARK 465 ASN D 700 REMARK 465 MET D 701 REMARK 465 ARG D 702 REMARK 465 ARG D 703 REMARK 465 GLN D 704 REMARK 465 ALA D 705 REMARK 465 LYS D 706 REMARK 465 ALA D 707 REMARK 465 DC C 0 REMARK 465 DA C 1 REMARK 465 DC F 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DA F 1 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 1524 O HOH D 1552 1.85 REMARK 500 O HOH D 1394 O HOH D 1504 1.91 REMARK 500 O HOH D 1596 O HOH D 1604 1.95 REMARK 500 O HOH D 1391 O HOH D 1392 1.96 REMARK 500 OD1 ASP A 408 O HOH A 1097 1.96 REMARK 500 O ASN A 468 O HOH A 1144 1.98 REMARK 500 OD1 ASN D 607 O HOH D 1378 2.07 REMARK 500 OD1 ASN A 607 O HOH A 1094 2.07 REMARK 500 NE2 GLN D 502 O HOH D 1603 2.10 REMARK 500 O HOH D 1318 O HOH D 1566 2.11 REMARK 500 O HOH D 1210 O HOH D 1315 2.12 REMARK 500 OE2 GLU D 309 O HOH D 1598 2.12 REMARK 500 NH2 ARG A 466 O HOH A 1403 2.13 REMARK 500 OE1 GLU D 386 O HOH D 1243 2.14 REMARK 500 O HOH D 1288 O HOH D 1308 2.16 REMARK 500 O HOH A 1146 O HOH A 1370 2.17 REMARK 500 O THR A 365 O HOH A 1338 2.17 REMARK 500 O HOH A 1300 O HOH A 1313 2.17 REMARK 500 O HOH D 1287 O HOH D 1330 2.18 REMARK 500 NH1 ARG A 435 O HOH A 1229 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 1474 O HOH D 1565 4545 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA E 25 O3' DA E 25 C3' -0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 578 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG D 578 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG D 843 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 DC B 21 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT B 23 O4' - C1' - N1 ANGL. DEV. = -5.0 DEGREES REMARK 500 DT B 23 N3 - C4 - O4 ANGL. DEV. = 4.3 DEGREES REMARK 500 DA B 25 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC B 26 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DT B 27 O4' - C4' - C3' ANGL. DEV. = -3.0 DEGREES REMARK 500 DT B 27 O4' - C1' - N1 ANGL. DEV. = 5.2 DEGREES REMARK 500 DT C 2 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 DT C 2 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 DC C 4 O5' - P - OP2 ANGL. DEV. = -5.7 DEGREES REMARK 500 DC C 4 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC C 4 C2 - N3 - C4 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG C 5 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG C 5 N9 - C4 - C5 ANGL. DEV. = 2.8 DEGREES REMARK 500 DG C 5 N3 - C4 - N9 ANGL. DEV. = -5.7 DEGREES REMARK 500 DA C 6 O3' - P - OP2 ANGL. DEV. = -14.8 DEGREES REMARK 500 DA C 6 O4' - C1' - C2' ANGL. DEV. = 4.1 DEGREES REMARK 500 DG C 7 C2 - N3 - C4 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT C 8 O4' - C1' - N1 ANGL. DEV. = -5.8 DEGREES REMARK 500 DT C 8 N3 - C4 - O4 ANGL. DEV. = 4.2 DEGREES REMARK 500 DT C 8 C5 - C4 - O4 ANGL. DEV. = -4.4 DEGREES REMARK 500 DG C 11 O4' - C1' - N9 ANGL. DEV. = -5.4 DEGREES REMARK 500 DG C 12 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC E 21 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT E 23 O4' - C1' - N1 ANGL. DEV. = -6.6 DEGREES REMARK 500 DC E 26 O4' - C1' - C2' ANGL. DEV. = 3.0 DEGREES REMARK 500 DC E 26 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DT E 27 O4' - C4' - C3' ANGL. DEV. = -4.2 DEGREES REMARK 500 DT E 27 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT F 2 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT F 3 N3 - C2 - O2 ANGL. DEV. = 4.0 DEGREES REMARK 500 DT F 3 N3 - C4 - O4 ANGL. DEV. = 3.7 DEGREES REMARK 500 DC F 4 O5' - P - OP2 ANGL. DEV. = -5.4 DEGREES REMARK 500 DG F 5 OP1 - P - OP2 ANGL. DEV. = -9.7 DEGREES REMARK 500 DG F 5 O4' - C1' - C2' ANGL. DEV. = 3.9 DEGREES REMARK 500 DG F 5 C6 - N1 - C2 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG F 5 N3 - C4 - C5 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG F 5 N3 - C4 - N9 ANGL. DEV. = -3.9 DEGREES REMARK 500 DA F 6 O4' - C1' - N9 ANGL. DEV. = -4.3 DEGREES REMARK 500 DG F 7 C5 - N7 - C8 ANGL. DEV. = 3.1 DEGREES REMARK 500 DT F 8 O4' - C1' - N1 ANGL. DEV. = -6.5 DEGREES REMARK 500 DC F 9 O4' - C1' - C2' ANGL. DEV. = 3.3 DEGREES REMARK 500 DG F 12 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 372 61.52 61.78 REMARK 500 ASP A 402 98.80 -165.21 REMARK 500 ASP A 408 16.75 -142.40 REMARK 500 ALA A 421 36.10 -87.53 REMARK 500 GLN A 524 148.68 -170.54 REMARK 500 ILE A 588 -69.79 -105.21 REMARK 500 ILE A 628 -25.55 -147.34 REMARK 500 ASP A 678 58.78 37.01 REMARK 500 HIS A 768 18.16 82.15 REMARK 500 HIS A 829 -52.93 66.32 REMARK 500 ASP D 402 94.62 -168.73 REMARK 500 ALA D 421 44.65 -91.97 REMARK 500 LEU D 477 -64.59 -120.02 REMARK 500 GLN D 524 147.08 -171.82 REMARK 500 ILE D 588 -69.21 -102.44 REMARK 500 ILE D 628 -22.52 -149.03 REMARK 500 HIS D 768 21.71 82.76 REMARK 500 HIS D 829 -53.07 75.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 902 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4EZ6 RELATED DB: PDB REMARK 900 RELATED ID: 4EZ9 RELATED DB: PDB REMARK 900 RELATED ID: 4F3O RELATED DB: PDB REMARK 900 RELATED ID: 4F4K RELATED DB: PDB REMARK 900 RELATED ID: 4F2R RELATED DB: PDB REMARK 900 RELATED ID: 4F2S RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE PROTEIN WAS ISOLATED FROM A STRAIN OF REMARK 999 GEOBACILLUS SPECIES WHOSE SEQUENCE IS NOT AVAILABLE IN THE UNIPROT REMARK 999 DATABASE. IT DIFFERS FROM UNP Q5KWC1 BY THIS SINGLE RESIDUE DBREF 4F8R A 285 876 UNP Q5KWC1 Q5KWC1_GEOKA 287 878 DBREF 4F8R D 285 876 UNP Q5KWC1 Q5KWC1_GEOKA 287 878 DBREF 4F8R B 21 29 PDB 4F8R 4F8R 21 29 DBREF 4F8R E 21 29 PDB 4F8R 4F8R 21 29 DBREF 4F8R C 0 12 PDB 4F8R 4F8R 0 12 DBREF 4F8R F 0 12 PDB 4F8R 4F8R 0 12 SEQADV 4F8R ALA A 598 UNP Q5KWC1 ASP 600 ENGINEERED MUTATION SEQADV 4F8R TYR A 710 UNP Q5KWC1 PHE 712 ENGINEERED MUTATION SEQADV 4F8R HIS A 823 UNP Q5KWC1 ARG 825 SEE REMARK 999 SEQADV 4F8R ALA D 598 UNP Q5KWC1 ASP 600 ENGINEERED MUTATION SEQADV 4F8R TYR D 710 UNP Q5KWC1 PHE 712 ENGINEERED MUTATION SEQADV 4F8R HIS D 823 UNP Q5KWC1 ARG 825 SEE REMARK 999 SEQRES 1 A 592 MET GLU SER PRO SER SER GLU GLU GLU LYS PRO LEU ALA SEQRES 2 A 592 LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU GLU SEQRES 3 A 592 MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL VAL SEQRES 4 A 592 GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE ALA SEQRES 5 A 592 VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO GLU SEQRES 6 A 592 THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU GLY SEQRES 7 A 592 ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS ARG SEQRES 8 A 592 ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU CYS SEQRES 9 A 592 GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU LEU SEQRES 10 A 592 ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA ALA SEQRES 11 A 592 LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU ALA SEQRES 12 A 592 VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP GLU SEQRES 13 A 592 PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA ALA SEQRES 14 A 592 ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU ARG SEQRES 15 A 592 ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU GLN SEQRES 16 A 592 PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA GLY SEQRES 17 A 592 VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY LYS SEQRES 18 A 592 GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG ILE SEQRES 19 A 592 TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER PRO SEQRES 20 A 592 LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN LEU SEQRES 21 A 592 PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR SER SEQRES 22 A 592 ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU ILE SEQRES 23 A 592 VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS LEU SEQRES 24 A 592 GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL ARG SEQRES 25 A 592 PRO ALA THR LYS LYS VAL HIS THR ILE PHE ASN GLN ALA SEQRES 26 A 592 LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO ASN SEQRES 27 A 592 LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG LYS SEQRES 28 A 592 ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP LEU SEQRES 29 A 592 ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG VAL SEQRES 30 A 592 LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU ALA SEQRES 31 A 592 PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA MET SEQRES 32 A 592 ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO ASN SEQRES 33 A 592 MET ARG ARG GLN ALA LYS ALA VAL ASN TYR GLY ILE VAL SEQRES 34 A 592 TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU ASN SEQRES 35 A 592 ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG TYR SEQRES 36 A 592 PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU ASN SEQRES 37 A 592 ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR THR SEQRES 38 A 592 LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR SER SEQRES 39 A 592 ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET ALA SEQRES 40 A 592 MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE ILE SEQRES 41 A 592 LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS GLU SEQRES 42 A 592 GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS ASP SEQRES 43 A 592 GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU ARG SEQRES 44 A 592 LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA VAL SEQRES 45 A 592 THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR GLY SEQRES 46 A 592 SER THR TRP TYR ASP ALA LYS SEQRES 1 D 592 MET GLU SER PRO SER SER GLU GLU GLU LYS PRO LEU ALA SEQRES 2 D 592 LYS MET ALA PHE THR LEU ALA ASP ARG VAL THR GLU GLU SEQRES 3 D 592 MET LEU ALA ASP LYS ALA ALA LEU VAL VAL GLU VAL VAL SEQRES 4 D 592 GLU GLU ASN TYR HIS ASP ALA PRO ILE VAL GLY ILE ALA SEQRES 5 D 592 VAL VAL ASN GLU HIS GLY ARG PHE PHE LEU ARG PRO GLU SEQRES 6 D 592 THR ALA LEU ALA ASP PRO GLN PHE VAL ALA TRP LEU GLY SEQRES 7 D 592 ASP GLU THR LYS LYS LYS SER MET PHE ASP SER LYS ARG SEQRES 8 D 592 ALA ALA VAL ALA LEU LYS TRP LYS GLY ILE GLU LEU CYS SEQRES 9 D 592 GLY VAL SER PHE ASP LEU LEU LEU ALA ALA TYR LEU LEU SEQRES 10 D 592 ASP PRO ALA GLN GLY VAL ASP ASP VAL ALA ALA ALA ALA SEQRES 11 D 592 LYS MET LYS GLN TYR GLU ALA VAL ARG PRO ASP GLU ALA SEQRES 12 D 592 VAL TYR GLY LYS GLY ALA LYS ARG ALA VAL PRO ASP GLU SEQRES 13 D 592 PRO VAL LEU ALA GLU HIS LEU VAL ARG LYS ALA ALA ALA SEQRES 14 D 592 ILE TRP GLU LEU GLU ARG PRO PHE LEU ASP GLU LEU ARG SEQRES 15 D 592 ARG ASN GLU GLN ASP ARG LEU LEU VAL GLU LEU GLU GLN SEQRES 16 D 592 PRO LEU SER SER ILE LEU ALA GLU MET GLU PHE ALA GLY SEQRES 17 D 592 VAL LYS VAL ASP THR LYS ARG LEU GLU GLN MET GLY LYS SEQRES 18 D 592 GLU LEU ALA GLU GLN LEU GLY THR VAL GLU GLN ARG ILE SEQRES 19 D 592 TYR GLU LEU ALA GLY GLN GLU PHE ASN ILE ASN SER PRO SEQRES 20 D 592 LYS GLN LEU GLY VAL ILE LEU PHE GLU LYS LEU GLN LEU SEQRES 21 D 592 PRO VAL LEU LYS LYS THR LYS THR GLY TYR SER THR SER SEQRES 22 D 592 ALA ASP VAL LEU GLU LYS LEU ALA PRO TYR HIS GLU ILE SEQRES 23 D 592 VAL GLU ASN ILE LEU HIS TYR ARG GLN LEU GLY LYS LEU SEQRES 24 D 592 GLN SER THR TYR ILE GLU GLY LEU LEU LYS VAL VAL ARG SEQRES 25 D 592 PRO ALA THR LYS LYS VAL HIS THR ILE PHE ASN GLN ALA SEQRES 26 D 592 LEU THR GLN THR GLY ARG LEU SER SER THR GLU PRO ASN SEQRES 27 D 592 LEU GLN ASN ILE PRO ILE ARG LEU GLU GLU GLY ARG LYS SEQRES 28 D 592 ILE ARG GLN ALA PHE VAL PRO SER GLU SER ASP TRP LEU SEQRES 29 D 592 ILE PHE ALA ALA ASP TYR SER GLN ILE GLU LEU ARG VAL SEQRES 30 D 592 LEU ALA HIS ILE ALA GLU ASP ASP ASN LEU MET GLU ALA SEQRES 31 D 592 PHE ARG ARG ASP LEU ASP ILE HIS THR LYS THR ALA MET SEQRES 32 D 592 ASP ILE PHE GLN VAL SER GLU ASP GLU VAL THR PRO ASN SEQRES 33 D 592 MET ARG ARG GLN ALA LYS ALA VAL ASN TYR GLY ILE VAL SEQRES 34 D 592 TYR GLY ILE SER ASP TYR GLY LEU ALA GLN ASN LEU ASN SEQRES 35 D 592 ILE SER ARG LYS GLU ALA ALA GLU PHE ILE GLU ARG TYR SEQRES 36 D 592 PHE GLU SER PHE PRO GLY VAL LYS ARG TYR MET GLU ASN SEQRES 37 D 592 ILE VAL GLN GLU ALA LYS GLN LYS GLY TYR VAL THR THR SEQRES 38 D 592 LEU LEU HIS ARG ARG ARG TYR LEU PRO ASP ILE THR SER SEQRES 39 D 592 ARG ASN PHE ASN VAL ARG SER PHE ALA GLU ARG MET ALA SEQRES 40 D 592 MET ASN THR PRO ILE GLN GLY SER ALA ALA ASP ILE ILE SEQRES 41 D 592 LYS LYS ALA MET ILE ASP LEU ASN ALA ARG LEU LYS GLU SEQRES 42 D 592 GLU ARG LEU GLN ALA HIS LEU LEU LEU GLN VAL HIS ASP SEQRES 43 D 592 GLU LEU ILE LEU GLU ALA PRO LYS GLU GLU MET GLU ARG SEQRES 44 D 592 LEU CYS ARG LEU VAL PRO GLU VAL MET GLU GLN ALA VAL SEQRES 45 D 592 THR LEU ARG VAL PRO LEU LYS VAL ASP TYR HIS TYR GLY SEQRES 46 D 592 SER THR TRP TYR ASP ALA LYS SEQRES 1 B 9 DC DC DT DG DA DC DT DC DDG SEQRES 1 C 13 DC DA DT DT DC DG DA DG DT DC DA DG DG SEQRES 1 E 9 DC DC DT DG DA DC DT DC DDG SEQRES 1 F 13 DC DA DT DT DC DG DA DG DT DC DA DG DG MODRES 4F8R DDG B 29 DG MODRES 4F8R DDG E 29 DG HET DDG B 29 30 HET DDG E 29 31 HET SO4 A 901 5 HET SO4 A 902 5 HET SO4 A 903 5 HET SO4 D 901 5 HET SO4 D 902 5 HETNAM DDG 2',3'-DIDEOXY-GUANOSINE-5'-MONOPHOSPHATE HETNAM SO4 SULFATE ION FORMUL 3 DDG 2(C10 H14 N5 O6 P) FORMUL 7 SO4 5(O4 S 2-) FORMUL 12 HOH *1194(H2 O) HELIX 1 1 THR A 308 ALA A 313 5 6 HELIX 2 2 ARG A 347 LEU A 352 1 6 HELIX 3 3 ASP A 354 ASP A 363 1 10 HELIX 4 4 ASP A 372 TRP A 382 1 11 HELIX 5 5 LEU A 394 ASP A 402 1 9 HELIX 6 6 PRO A 403 GLY A 406 5 4 HELIX 7 7 ASP A 409 MET A 416 1 8 HELIX 8 8 PRO A 424 GLY A 430 1 7 HELIX 9 9 LYS A 431 ARG A 435 5 5 HELIX 10 10 ASP A 439 ASN A 468 1 30 HELIX 11 11 GLN A 470 LEU A 477 1 8 HELIX 12 12 LEU A 477 GLY A 492 1 16 HELIX 13 13 ASP A 496 GLY A 523 1 28 HELIX 14 14 SER A 530 GLU A 540 1 11 HELIX 15 15 SER A 557 LEU A 564 1 8 HELIX 16 16 GLU A 569 ILE A 588 1 20 HELIX 17 17 ILE A 588 VAL A 595 1 8 HELIX 18 18 LEU A 630 LYS A 635 1 6 HELIX 19 19 ILE A 636 GLN A 638 5 3 HELIX 20 20 GLN A 656 GLU A 667 1 12 HELIX 21 21 ASP A 668 ARG A 677 1 10 HELIX 22 22 ASP A 680 PHE A 690 1 11 HELIX 23 23 SER A 693 VAL A 697 5 5 HELIX 24 24 THR A 698 TYR A 714 1 17 HELIX 25 25 SER A 717 ASN A 726 1 10 HELIX 26 26 SER A 728 PHE A 743 1 16 HELIX 27 27 PHE A 743 GLY A 761 1 19 HELIX 28 28 ASN A 780 GLU A 818 1 39 HELIX 29 29 GLU A 840 GLN A 854 1 15 HELIX 30 30 THR D 308 ALA D 313 5 6 HELIX 31 31 ARG D 347 LEU D 352 1 6 HELIX 32 32 ASP D 354 GLY D 362 1 9 HELIX 33 33 ASP D 372 TRP D 382 1 11 HELIX 34 34 LEU D 394 ASP D 402 1 9 HELIX 35 35 PRO D 403 GLY D 406 5 4 HELIX 36 36 ASP D 409 MET D 416 1 8 HELIX 37 37 PRO D 424 GLY D 430 1 7 HELIX 38 38 LYS D 431 ARG D 435 5 5 HELIX 39 39 ASP D 439 ASN D 468 1 30 HELIX 40 40 GLN D 470 LEU D 477 1 8 HELIX 41 41 LEU D 477 GLY D 492 1 16 HELIX 42 42 ASP D 496 GLY D 523 1 28 HELIX 43 43 SER D 530 GLU D 540 1 11 HELIX 44 44 SER D 557 LEU D 564 1 8 HELIX 45 45 GLU D 569 ILE D 588 1 20 HELIX 46 46 ILE D 588 VAL D 595 1 8 HELIX 47 47 LEU D 630 LYS D 635 1 6 HELIX 48 48 ILE D 636 GLN D 638 5 3 HELIX 49 49 GLN D 656 GLU D 667 1 12 HELIX 50 50 ASP D 668 ARG D 677 1 10 HELIX 51 51 ASN D 709 TYR D 714 1 6 HELIX 52 52 SER D 717 ASN D 726 1 10 HELIX 53 53 SER D 728 PHE D 743 1 16 HELIX 54 54 PHE D 743 GLY D 761 1 19 HELIX 55 55 PRO D 774 SER D 778 5 5 HELIX 56 56 ASN D 780 GLU D 818 1 39 HELIX 57 57 GLU D 840 ALA D 855 1 16 SHEET 1 A 6 THR A 302 LEU A 303 0 SHEET 2 A 6 GLY A 342 LEU A 346 1 O ARG A 343 N THR A 302 SHEET 3 A 6 GLY A 334 ASN A 339 -1 N VAL A 337 O PHE A 344 SHEET 4 A 6 LYS A 315 GLU A 321 -1 N ALA A 317 O VAL A 338 SHEET 5 A 6 LYS A 367 MET A 370 1 O SER A 369 N LEU A 318 SHEET 6 A 6 VAL A 390 ASP A 393 1 O PHE A 392 N MET A 370 SHEET 1 B 3 LYS A 601 VAL A 602 0 SHEET 2 B 3 VAL A 493 VAL A 495 -1 N VAL A 493 O VAL A 602 SHEET 3 B 3 PHE A 640 VAL A 641 -1 O VAL A 641 N LYS A 494 SHEET 1 C 2 ILE A 605 ASN A 607 0 SHEET 2 C 2 SER A 617 THR A 619 -1 O THR A 619 N ILE A 605 SHEET 1 D 4 HIS A 823 GLN A 827 0 SHEET 2 D 4 GLU A 831 PRO A 837 -1 O ILE A 833 N LEU A 825 SHEET 3 D 4 TRP A 647 TYR A 654 -1 N PHE A 650 O LEU A 834 SHEET 4 D 4 VAL A 864 GLY A 869 -1 O GLY A 869 N ILE A 649 SHEET 1 E 2 TYR A 762 THR A 764 0 SHEET 2 E 2 ARG A 770 TYR A 772 -1 O ARG A 771 N VAL A 763 SHEET 1 F 6 THR D 302 LEU D 303 0 SHEET 2 F 6 GLY D 342 LEU D 346 1 O ARG D 343 N THR D 302 SHEET 3 F 6 GLY D 334 ASN D 339 -1 N ILE D 335 O LEU D 346 SHEET 4 F 6 LYS D 315 GLU D 321 -1 N VAL D 319 O ALA D 336 SHEET 5 F 6 LYS D 367 MET D 370 1 O SER D 369 N ALA D 316 SHEET 6 F 6 VAL D 390 ASP D 393 1 O PHE D 392 N MET D 370 SHEET 1 G 3 LYS D 601 VAL D 602 0 SHEET 2 G 3 VAL D 493 VAL D 495 -1 N VAL D 493 O VAL D 602 SHEET 3 G 3 PHE D 640 VAL D 641 -1 O VAL D 641 N LYS D 494 SHEET 1 H 2 ILE D 605 ASN D 607 0 SHEET 2 H 2 SER D 617 THR D 619 -1 O THR D 619 N ILE D 605 SHEET 1 I 4 HIS D 823 GLN D 827 0 SHEET 2 I 4 GLU D 831 PRO D 837 -1 O ILE D 833 N LEU D 825 SHEET 3 I 4 TRP D 647 TYR D 654 -1 N PHE D 650 O LEU D 834 SHEET 4 I 4 VAL D 864 GLY D 869 -1 O HIS D 867 N ALA D 651 SHEET 1 J 2 TYR D 762 THR D 764 0 SHEET 2 J 2 ARG D 770 TYR D 772 -1 O ARG D 771 N VAL D 763 LINK O3' DC B 28 P DDG B 29 1555 1555 1.62 LINK O3' DC E 28 P DDG E 29 1555 1555 1.61 CISPEP 1 GLU A 620 PRO A 621 0 0.65 CISPEP 2 GLU D 620 PRO D 621 0 1.48 SITE 1 AC1 6 ARG A 779 ASN A 780 HOH A1227 HOH A1282 SITE 2 AC1 6 ARG D 423 PRO D 424 SITE 1 AC2 6 GLN A 656 HIS A 682 LYS A 706 TYR A 710 SITE 2 AC2 6 HOH A1028 HOH A1351 SITE 1 AC3 2 ARG A 517 ASN A 573 SITE 1 AC4 4 MET D 299 ALA D 300 ARG D 343 ARG D 677 SITE 1 AC5 4 ARG D 306 THR D 308 GLU D 309 HOH D1384 CRYST1 93.670 109.370 150.390 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010676 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006649 0.00000