HEADER OXIDOREDUCTASE 24-MAY-12 4FC7 TITLE STUDIES ON DCR SHED NEW LIGHT ON PEROXISOMAL BETA-OXIDATION: CRYSTAL TITLE 2 STRUCTURE OF THE TERNARY COMPLEX OF PDCR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 2-278; COMPND 5 SYNONYM: PDCR, 2,4-DIENOYL-COA REDUCTASE 2; COMPND 6 EC: 1.3.1.34; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DECR2, PDCR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SDR/ROSSMANN FOLD, PEROXISOMAL BETA-OXIDATION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.HUA,D.WU,J.WANG,N.SHAW,Z.-J.LIU REVDAT 4 28-FEB-24 4FC7 1 REMARK REVDAT 3 24-JUL-13 4FC7 1 JRNL REVDAT 2 11-JUL-12 4FC7 1 JRNL REVDAT 1 04-JUL-12 4FC7 0 JRNL AUTH T.HUA,D.WU,W.DING,J.WANG,N.SHAW,Z.J.LIU JRNL TITL STUDIES OF HUMAN 2,4-DIENOYL COA REDUCTASE SHED NEW LIGHT ON JRNL TITL 2 PEROXISOMAL BETA-OXIDATION OF UNSATURATED FATTY ACIDS JRNL REF J.BIOL.CHEM. V. 287 28956 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22745130 JRNL DOI 10.1074/JBC.M112.385351 REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 88210 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4619 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.89 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5411 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 293 REMARK 3 BIN FREE R VALUE : 0.4040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8142 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 384 REMARK 3 SOLVENT ATOMS : 792 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.102 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.000 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.001 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4FC7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072718. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88210 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES (PH 6.0) AND 8% PEG6000, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.05000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.07800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.25100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.07800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.25100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 GLY A 278 REMARK 465 ALA B 2 REMARK 465 GLY C 278 REMARK 465 ALA D 2 REMARK 465 GLN D 3 REMARK 465 PRO D 4 REMARK 465 PRO D 5 REMARK 465 PRO D 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 177 NE2 HIS A 177 CD2 -0.072 REMARK 500 HIS B 177 CG HIS B 177 CD2 0.063 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 138 -64.71 -92.62 REMARK 500 PHE A 152 -48.44 -157.50 REMARK 500 THR A 164 -131.99 -115.51 REMARK 500 ASP A 268 15.55 -142.90 REMARK 500 ASP B 28 -6.46 74.77 REMARK 500 PHE B 152 -45.41 -154.32 REMARK 500 THR B 164 -137.64 -117.90 REMARK 500 ASP B 268 17.57 -140.04 REMARK 500 THR C 138 -62.45 -92.21 REMARK 500 PHE C 152 -45.63 -154.75 REMARK 500 THR C 164 -135.19 -122.34 REMARK 500 THR D 138 -67.55 -95.19 REMARK 500 PHE D 152 -48.56 -156.93 REMARK 500 THR D 164 -136.74 -118.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA D 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4FC6 RELATED DB: PDB DBREF 4FC7 A 2 278 UNP Q9NUI1 DECR2_HUMAN 2 278 DBREF 4FC7 B 2 278 UNP Q9NUI1 DECR2_HUMAN 2 278 DBREF 4FC7 C 2 278 UNP Q9NUI1 DECR2_HUMAN 2 278 DBREF 4FC7 D 2 278 UNP Q9NUI1 DECR2_HUMAN 2 278 SEQRES 1 A 277 ALA GLN PRO PRO PRO ASP VAL GLU GLY ASP ASP CYS LEU SEQRES 2 A 277 PRO ALA TYR ARG HIS LEU PHE CYS PRO ASP LEU LEU ARG SEQRES 3 A 277 ASP LYS VAL ALA PHE ILE THR GLY GLY GLY SER GLY ILE SEQRES 4 A 277 GLY PHE ARG ILE ALA GLU ILE PHE MET ARG HIS GLY CYS SEQRES 5 A 277 HIS THR VAL ILE ALA SER ARG SER LEU PRO ARG VAL LEU SEQRES 6 A 277 THR ALA ALA ARG LYS LEU ALA GLY ALA THR GLY ARG ARG SEQRES 7 A 277 CYS LEU PRO LEU SER MET ASP VAL ARG ALA PRO PRO ALA SEQRES 8 A 277 VAL MET ALA ALA VAL ASP GLN ALA LEU LYS GLU PHE GLY SEQRES 9 A 277 ARG ILE ASP ILE LEU ILE ASN CYS ALA ALA GLY ASN PHE SEQRES 10 A 277 LEU CYS PRO ALA GLY ALA LEU SER PHE ASN ALA PHE LYS SEQRES 11 A 277 THR VAL MET ASP ILE ASP THR SER GLY THR PHE ASN VAL SEQRES 12 A 277 SER ARG VAL LEU TYR GLU LYS PHE PHE ARG ASP HIS GLY SEQRES 13 A 277 GLY VAL ILE VAL ASN ILE THR ALA THR LEU GLY ASN ARG SEQRES 14 A 277 GLY GLN ALA LEU GLN VAL HIS ALA GLY SER ALA LYS ALA SEQRES 15 A 277 ALA VAL ASP ALA MET THR ARG HIS LEU ALA VAL GLU TRP SEQRES 16 A 277 GLY PRO GLN ASN ILE ARG VAL ASN SER LEU ALA PRO GLY SEQRES 17 A 277 PRO ILE SER GLY THR GLU GLY LEU ARG ARG LEU GLY GLY SEQRES 18 A 277 PRO GLN ALA SER LEU SER THR LYS VAL THR ALA SER PRO SEQRES 19 A 277 LEU GLN ARG LEU GLY ASN LYS THR GLU ILE ALA HIS SER SEQRES 20 A 277 VAL LEU TYR LEU ALA SER PRO LEU ALA SER TYR VAL THR SEQRES 21 A 277 GLY ALA VAL LEU VAL ALA ASP GLY GLY ALA TRP LEU THR SEQRES 22 A 277 PHE PRO ASN GLY SEQRES 1 B 277 ALA GLN PRO PRO PRO ASP VAL GLU GLY ASP ASP CYS LEU SEQRES 2 B 277 PRO ALA TYR ARG HIS LEU PHE CYS PRO ASP LEU LEU ARG SEQRES 3 B 277 ASP LYS VAL ALA PHE ILE THR GLY GLY GLY SER GLY ILE SEQRES 4 B 277 GLY PHE ARG ILE ALA GLU ILE PHE MET ARG HIS GLY CYS SEQRES 5 B 277 HIS THR VAL ILE ALA SER ARG SER LEU PRO ARG VAL LEU SEQRES 6 B 277 THR ALA ALA ARG LYS LEU ALA GLY ALA THR GLY ARG ARG SEQRES 7 B 277 CYS LEU PRO LEU SER MET ASP VAL ARG ALA PRO PRO ALA SEQRES 8 B 277 VAL MET ALA ALA VAL ASP GLN ALA LEU LYS GLU PHE GLY SEQRES 9 B 277 ARG ILE ASP ILE LEU ILE ASN CYS ALA ALA GLY ASN PHE SEQRES 10 B 277 LEU CYS PRO ALA GLY ALA LEU SER PHE ASN ALA PHE LYS SEQRES 11 B 277 THR VAL MET ASP ILE ASP THR SER GLY THR PHE ASN VAL SEQRES 12 B 277 SER ARG VAL LEU TYR GLU LYS PHE PHE ARG ASP HIS GLY SEQRES 13 B 277 GLY VAL ILE VAL ASN ILE THR ALA THR LEU GLY ASN ARG SEQRES 14 B 277 GLY GLN ALA LEU GLN VAL HIS ALA GLY SER ALA LYS ALA SEQRES 15 B 277 ALA VAL ASP ALA MET THR ARG HIS LEU ALA VAL GLU TRP SEQRES 16 B 277 GLY PRO GLN ASN ILE ARG VAL ASN SER LEU ALA PRO GLY SEQRES 17 B 277 PRO ILE SER GLY THR GLU GLY LEU ARG ARG LEU GLY GLY SEQRES 18 B 277 PRO GLN ALA SER LEU SER THR LYS VAL THR ALA SER PRO SEQRES 19 B 277 LEU GLN ARG LEU GLY ASN LYS THR GLU ILE ALA HIS SER SEQRES 20 B 277 VAL LEU TYR LEU ALA SER PRO LEU ALA SER TYR VAL THR SEQRES 21 B 277 GLY ALA VAL LEU VAL ALA ASP GLY GLY ALA TRP LEU THR SEQRES 22 B 277 PHE PRO ASN GLY SEQRES 1 C 277 ALA GLN PRO PRO PRO ASP VAL GLU GLY ASP ASP CYS LEU SEQRES 2 C 277 PRO ALA TYR ARG HIS LEU PHE CYS PRO ASP LEU LEU ARG SEQRES 3 C 277 ASP LYS VAL ALA PHE ILE THR GLY GLY GLY SER GLY ILE SEQRES 4 C 277 GLY PHE ARG ILE ALA GLU ILE PHE MET ARG HIS GLY CYS SEQRES 5 C 277 HIS THR VAL ILE ALA SER ARG SER LEU PRO ARG VAL LEU SEQRES 6 C 277 THR ALA ALA ARG LYS LEU ALA GLY ALA THR GLY ARG ARG SEQRES 7 C 277 CYS LEU PRO LEU SER MET ASP VAL ARG ALA PRO PRO ALA SEQRES 8 C 277 VAL MET ALA ALA VAL ASP GLN ALA LEU LYS GLU PHE GLY SEQRES 9 C 277 ARG ILE ASP ILE LEU ILE ASN CYS ALA ALA GLY ASN PHE SEQRES 10 C 277 LEU CYS PRO ALA GLY ALA LEU SER PHE ASN ALA PHE LYS SEQRES 11 C 277 THR VAL MET ASP ILE ASP THR SER GLY THR PHE ASN VAL SEQRES 12 C 277 SER ARG VAL LEU TYR GLU LYS PHE PHE ARG ASP HIS GLY SEQRES 13 C 277 GLY VAL ILE VAL ASN ILE THR ALA THR LEU GLY ASN ARG SEQRES 14 C 277 GLY GLN ALA LEU GLN VAL HIS ALA GLY SER ALA LYS ALA SEQRES 15 C 277 ALA VAL ASP ALA MET THR ARG HIS LEU ALA VAL GLU TRP SEQRES 16 C 277 GLY PRO GLN ASN ILE ARG VAL ASN SER LEU ALA PRO GLY SEQRES 17 C 277 PRO ILE SER GLY THR GLU GLY LEU ARG ARG LEU GLY GLY SEQRES 18 C 277 PRO GLN ALA SER LEU SER THR LYS VAL THR ALA SER PRO SEQRES 19 C 277 LEU GLN ARG LEU GLY ASN LYS THR GLU ILE ALA HIS SER SEQRES 20 C 277 VAL LEU TYR LEU ALA SER PRO LEU ALA SER TYR VAL THR SEQRES 21 C 277 GLY ALA VAL LEU VAL ALA ASP GLY GLY ALA TRP LEU THR SEQRES 22 C 277 PHE PRO ASN GLY SEQRES 1 D 277 ALA GLN PRO PRO PRO ASP VAL GLU GLY ASP ASP CYS LEU SEQRES 2 D 277 PRO ALA TYR ARG HIS LEU PHE CYS PRO ASP LEU LEU ARG SEQRES 3 D 277 ASP LYS VAL ALA PHE ILE THR GLY GLY GLY SER GLY ILE SEQRES 4 D 277 GLY PHE ARG ILE ALA GLU ILE PHE MET ARG HIS GLY CYS SEQRES 5 D 277 HIS THR VAL ILE ALA SER ARG SER LEU PRO ARG VAL LEU SEQRES 6 D 277 THR ALA ALA ARG LYS LEU ALA GLY ALA THR GLY ARG ARG SEQRES 7 D 277 CYS LEU PRO LEU SER MET ASP VAL ARG ALA PRO PRO ALA SEQRES 8 D 277 VAL MET ALA ALA VAL ASP GLN ALA LEU LYS GLU PHE GLY SEQRES 9 D 277 ARG ILE ASP ILE LEU ILE ASN CYS ALA ALA GLY ASN PHE SEQRES 10 D 277 LEU CYS PRO ALA GLY ALA LEU SER PHE ASN ALA PHE LYS SEQRES 11 D 277 THR VAL MET ASP ILE ASP THR SER GLY THR PHE ASN VAL SEQRES 12 D 277 SER ARG VAL LEU TYR GLU LYS PHE PHE ARG ASP HIS GLY SEQRES 13 D 277 GLY VAL ILE VAL ASN ILE THR ALA THR LEU GLY ASN ARG SEQRES 14 D 277 GLY GLN ALA LEU GLN VAL HIS ALA GLY SER ALA LYS ALA SEQRES 15 D 277 ALA VAL ASP ALA MET THR ARG HIS LEU ALA VAL GLU TRP SEQRES 16 D 277 GLY PRO GLN ASN ILE ARG VAL ASN SER LEU ALA PRO GLY SEQRES 17 D 277 PRO ILE SER GLY THR GLU GLY LEU ARG ARG LEU GLY GLY SEQRES 18 D 277 PRO GLN ALA SER LEU SER THR LYS VAL THR ALA SER PRO SEQRES 19 D 277 LEU GLN ARG LEU GLY ASN LYS THR GLU ILE ALA HIS SER SEQRES 20 D 277 VAL LEU TYR LEU ALA SER PRO LEU ALA SER TYR VAL THR SEQRES 21 D 277 GLY ALA VAL LEU VAL ALA ASP GLY GLY ALA TRP LEU THR SEQRES 22 D 277 PHE PRO ASN GLY HET NAP A 401 48 HET COA A 402 48 HET NAP B 401 48 HET COA B 402 48 HET NAP C 401 48 HET COA C 402 48 HET NAP D 401 48 HET COA D 402 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM COA COENZYME A HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 5 NAP 4(C21 H28 N7 O17 P3) FORMUL 6 COA 4(C21 H36 N7 O16 P3 S) FORMUL 13 HOH *792(H2 O) HELIX 1 1 SER A 38 ARG A 50 1 13 HELIX 2 2 SER A 61 GLY A 77 1 17 HELIX 3 3 ALA A 89 GLY A 105 1 17 HELIX 4 4 PRO A 121 LEU A 125 5 5 HELIX 5 5 SER A 126 THR A 138 1 13 HELIX 6 6 THR A 138 PHE A 152 1 15 HELIX 7 7 PHE A 152 GLY A 157 1 6 HELIX 8 8 THR A 166 GLY A 171 1 6 HELIX 9 9 GLN A 175 GLY A 197 1 23 HELIX 10 10 THR A 214 GLY A 221 1 8 HELIX 11 11 PRO A 223 ALA A 233 1 11 HELIX 12 12 ASN A 241 SER A 254 1 14 HELIX 13 13 PRO A 255 SER A 258 5 4 HELIX 14 14 GLY A 270 PHE A 275 1 6 HELIX 15 15 SER B 38 HIS B 51 1 14 HELIX 16 16 SER B 61 GLY B 77 1 17 HELIX 17 17 ALA B 89 GLY B 105 1 17 HELIX 18 18 PRO B 121 LEU B 125 5 5 HELIX 19 19 SER B 126 PHE B 152 1 27 HELIX 20 20 PHE B 152 GLY B 157 1 6 HELIX 21 21 GLN B 175 GLY B 197 1 23 HELIX 22 22 THR B 214 GLY B 221 1 8 HELIX 23 23 PRO B 223 SER B 234 1 12 HELIX 24 24 ASN B 241 SER B 254 1 14 HELIX 25 25 PRO B 255 SER B 258 5 4 HELIX 26 26 GLY B 270 PHE B 275 1 6 HELIX 27 27 SER C 38 ARG C 50 1 13 HELIX 28 28 SER C 61 GLY C 77 1 17 HELIX 29 29 ALA C 89 GLY C 105 1 17 HELIX 30 30 PRO C 121 LEU C 125 5 5 HELIX 31 31 SER C 126 PHE C 152 1 27 HELIX 32 32 PHE C 152 GLY C 157 1 6 HELIX 33 33 GLN C 175 GLY C 197 1 23 HELIX 34 34 THR C 214 GLY C 221 1 8 HELIX 35 35 PRO C 223 ALA C 233 1 11 HELIX 36 36 ASN C 241 SER C 254 1 14 HELIX 37 37 PRO C 255 SER C 258 5 4 HELIX 38 38 GLY C 270 PHE C 275 1 6 HELIX 39 39 SER D 38 HIS D 51 1 14 HELIX 40 40 SER D 61 GLY D 77 1 17 HELIX 41 41 ALA D 89 GLY D 105 1 17 HELIX 42 42 SER D 126 PHE D 152 1 27 HELIX 43 43 PHE D 152 GLY D 157 1 6 HELIX 44 44 GLN D 175 GLY D 197 1 23 HELIX 45 45 THR D 214 GLY D 221 1 8 HELIX 46 46 PRO D 223 ALA D 233 1 11 HELIX 47 47 ASN D 241 SER D 254 1 14 HELIX 48 48 PRO D 255 SER D 258 5 4 HELIX 49 49 GLY D 270 PHE D 275 1 6 SHEET 1 A 7 CYS A 80 SER A 84 0 SHEET 2 A 7 HIS A 54 SER A 59 1 N ILE A 57 O LEU A 83 SHEET 3 A 7 VAL A 30 THR A 34 1 N ILE A 33 O VAL A 56 SHEET 4 A 7 ILE A 109 ASN A 112 1 O ILE A 109 N PHE A 32 SHEET 5 A 7 GLY A 158 ILE A 163 1 O VAL A 161 N LEU A 110 SHEET 6 A 7 ILE A 201 PRO A 208 1 O ASN A 204 N ASN A 162 SHEET 7 A 7 VAL A 264 ALA A 267 1 O LEU A 265 N SER A 205 SHEET 1 B 7 CYS B 80 SER B 84 0 SHEET 2 B 7 HIS B 54 SER B 59 1 N THR B 55 O LEU B 81 SHEET 3 B 7 VAL B 30 THR B 34 1 N ILE B 33 O VAL B 56 SHEET 4 B 7 ILE B 109 ASN B 112 1 O ILE B 109 N PHE B 32 SHEET 5 B 7 GLY B 158 ILE B 163 1 O VAL B 159 N LEU B 110 SHEET 6 B 7 ILE B 201 PRO B 208 1 O ASN B 204 N ASN B 162 SHEET 7 B 7 VAL B 264 ALA B 267 1 O LEU B 265 N SER B 205 SHEET 1 C 7 CYS C 80 SER C 84 0 SHEET 2 C 7 HIS C 54 SER C 59 1 N THR C 55 O LEU C 81 SHEET 3 C 7 VAL C 30 THR C 34 1 N ILE C 33 O VAL C 56 SHEET 4 C 7 ILE C 109 ASN C 112 1 O ILE C 111 N PHE C 32 SHEET 5 C 7 GLY C 158 ILE C 163 1 O VAL C 159 N LEU C 110 SHEET 6 C 7 ILE C 201 PRO C 208 1 O ASN C 204 N ASN C 162 SHEET 7 C 7 VAL C 264 ALA C 267 1 O LEU C 265 N SER C 205 SHEET 1 D 7 CYS D 80 SER D 84 0 SHEET 2 D 7 HIS D 54 SER D 59 1 N ILE D 57 O LEU D 83 SHEET 3 D 7 VAL D 30 THR D 34 1 N ILE D 33 O VAL D 56 SHEET 4 D 7 ILE D 109 ASN D 112 1 O ILE D 109 N PHE D 32 SHEET 5 D 7 GLY D 158 ILE D 163 1 O VAL D 159 N LEU D 110 SHEET 6 D 7 ILE D 201 PRO D 208 1 O ASN D 204 N ASN D 162 SHEET 7 D 7 VAL D 264 ALA D 267 1 O LEU D 265 N ALA D 207 SITE 1 AC1 35 GLY A 35 SER A 38 GLY A 39 ILE A 40 SITE 2 AC1 35 SER A 59 ARG A 60 SER A 61 ARG A 64 SITE 3 AC1 35 MET A 85 ASP A 86 VAL A 87 ARG A 88 SITE 4 AC1 35 CYS A 113 ALA A 114 ALA A 115 ILE A 136 SITE 5 AC1 35 ILE A 163 THR A 164 LYS A 182 PRO A 208 SITE 6 AC1 35 GLY A 209 PRO A 210 ILE A 211 THR A 214 SITE 7 AC1 35 GLU A 215 GLY A 216 COA A 402 HOH A 502 SITE 8 AC1 35 HOH A 505 HOH A 521 HOH A 530 HOH A 570 SITE 9 AC1 35 HOH A 709 HOH A 710 HOH A 713 SITE 1 AC2 29 ARG A 60 ARG A 88 GLY A 116 ASN A 117 SITE 2 AC2 29 PHE A 118 SER A 126 ASN A 128 ALA A 129 SITE 3 AC2 29 THR A 132 ARG A 219 NAP A 401 HOH A 525 SITE 4 AC2 29 HOH A 575 HOH A 578 HOH A 582 HOH A 598 SITE 5 AC2 29 HOH A 603 HOH A 612 HOH A 633 HOH A 642 SITE 6 AC2 29 HOH A 647 HOH A 686 HOH A 689 HOH A 696 SITE 7 AC2 29 HOH A 713 HOH A 715 ASP C 24 HOH C 553 SITE 8 AC2 29 HOH C 699 SITE 1 AC3 33 GLY B 35 SER B 38 GLY B 39 ILE B 40 SITE 2 AC3 33 SER B 59 ARG B 60 SER B 61 ARG B 64 SITE 3 AC3 33 MET B 85 ASP B 86 VAL B 87 ARG B 88 SITE 4 AC3 33 CYS B 113 ALA B 114 ALA B 115 ILE B 163 SITE 5 AC3 33 THR B 164 LYS B 182 PRO B 208 GLY B 209 SITE 6 AC3 33 PRO B 210 ILE B 211 THR B 214 GLU B 215 SITE 7 AC3 33 GLY B 216 COA B 402 HOH B 502 HOH B 504 SITE 8 AC3 33 HOH B 529 HOH B 539 HOH B 562 HOH B 565 SITE 9 AC3 33 HOH D 578 SITE 1 AC4 25 ARG B 18 ARG B 60 ARG B 88 GLY B 116 SITE 2 AC4 25 ASN B 117 PHE B 118 CYS B 120 SER B 126 SITE 3 AC4 25 ASN B 128 ALA B 129 THR B 132 GLU B 215 SITE 4 AC4 25 GLY B 216 ARG B 219 NAP B 401 HOH B 512 SITE 5 AC4 25 HOH B 535 HOH B 537 HOH B 556 HOH B 557 SITE 6 AC4 25 HOH B 566 HOH B 580 HOH B 593 HOH B 640 SITE 7 AC4 25 HOH D 598 SITE 1 AC5 32 GLY C 35 SER C 38 GLY C 39 ILE C 40 SITE 2 AC5 32 SER C 59 ARG C 60 SER C 61 ARG C 64 SITE 3 AC5 32 MET C 85 ASP C 86 VAL C 87 ARG C 88 SITE 4 AC5 32 CYS C 113 ALA C 114 ALA C 115 ILE C 163 SITE 5 AC5 32 THR C 164 LYS C 182 PRO C 208 GLY C 209 SITE 6 AC5 32 PRO C 210 ILE C 211 THR C 214 GLU C 215 SITE 7 AC5 32 GLY C 216 COA C 402 HOH C 504 HOH C 509 SITE 8 AC5 32 HOH C 548 HOH C 549 HOH C 567 HOH C 658 SITE 1 AC6 21 ARG C 60 ARG C 88 GLY C 116 ASN C 117 SITE 2 AC6 21 PHE C 118 SER C 126 ASN C 128 ALA C 129 SITE 3 AC6 21 THR C 132 GLY C 216 ARG C 219 NAP C 401 SITE 4 AC6 21 HOH C 515 HOH C 564 HOH C 578 HOH C 580 SITE 5 AC6 21 HOH C 597 HOH C 661 HOH C 665 HOH C 687 SITE 6 AC6 21 HOH C 705 SITE 1 AC7 31 GLY D 35 SER D 38 GLY D 39 ILE D 40 SITE 2 AC7 31 SER D 59 ARG D 60 SER D 61 ARG D 64 SITE 3 AC7 31 MET D 85 ASP D 86 VAL D 87 ARG D 88 SITE 4 AC7 31 CYS D 113 ALA D 114 ALA D 115 THR D 164 SITE 5 AC7 31 LYS D 182 PRO D 208 GLY D 209 ILE D 211 SITE 6 AC7 31 THR D 214 GLU D 215 GLY D 216 COA D 402 SITE 7 AC7 31 HOH D 501 HOH D 507 HOH D 545 HOH D 558 SITE 8 AC7 31 HOH D 562 HOH D 626 HOH D 657 SITE 1 AC8 20 ARG D 60 ARG D 88 ALA D 115 GLY D 116 SITE 2 AC8 20 ASN D 117 PHE D 118 SER D 126 ASN D 128 SITE 3 AC8 20 ALA D 129 THR D 132 ARG D 219 NAP D 401 SITE 4 AC8 20 HOH D 539 HOH D 567 HOH D 602 HOH D 618 SITE 5 AC8 20 HOH D 620 HOH D 651 HOH D 661 HOH D 665 CRYST1 88.100 94.502 130.156 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011351 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010582 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007683 0.00000