HEADER TRANSFERASE 24-MAY-12 4FCE TITLE CRYSTAL STRUCTURE OF YERSINIA PESTIS GLMU IN COMPLEX WITH ALPHA-D- TITLE 2 GLUCOSAMINE 1-PHOSPHATE (GP1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL PROTEIN GLMU; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE, N- COMPND 5 ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE, GLUCOSAMINE-1- COMPND 6 PHOSPHATE N-ACETYLTRANSFERASE; COMPND 7 EC: 2.7.7.23, 2.3.1.157; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS CO92; SOURCE 3 ORGANISM_TAXID: 214092; SOURCE 4 STRAIN: CO92; SOURCE 5 GENE: GLMU, YPTB3965; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PMCSG19C KEYWDS GLMU. CSGID, NIAID, STRUCTURAL GENOMICS, NATIONAL INSTITUTE OF KEYWDS 2 ALLERGY AND INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 3 INFECTIOUS DISEASES, GLMU, GP1, ALPHA-D-GLUCOSAMINE 1-PHOSPHATE, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,M.KUHN,M.GU,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 8 13-SEP-23 4FCE 1 HETSYN REVDAT 7 29-JUL-20 4FCE 1 COMPND REMARK SEQADV HETNAM REVDAT 7 2 1 LINK SITE ATOM REVDAT 6 17-JUL-19 4FCE 1 REMARK REVDAT 5 15-NOV-17 4FCE 1 REMARK REVDAT 4 14-DEC-16 4FCE 1 TITLE REVDAT 3 28-SEP-16 4FCE 1 JRNL TITLE REVDAT 2 21-OCT-15 4FCE 1 SOURCE REVDAT 1 11-JUL-12 4FCE 0 JRNL AUTH B.NOCEK,M.KUHN,W.F.ANDERSON,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF YERSINIA PESTIS GLMU IN COMPLEX WITH JRNL TITL 2 ALPHA-D-GLUCOSAMINE 1-PHOSPHATE (GP1) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 39544 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.4711 - 4.7086 0.96 3080 144 0.2202 0.2295 REMARK 3 2 4.7086 - 3.7391 0.98 2896 153 0.1617 0.1938 REMARK 3 3 3.7391 - 3.2669 0.99 2886 162 0.1672 0.2164 REMARK 3 4 3.2669 - 2.9685 1.00 2864 169 0.1778 0.2079 REMARK 3 5 2.9685 - 2.7558 1.00 2846 154 0.1739 0.2067 REMARK 3 6 2.7558 - 2.5934 1.00 2847 156 0.1781 0.2131 REMARK 3 7 2.5934 - 2.4636 1.00 2816 160 0.1745 0.2264 REMARK 3 8 2.4636 - 2.3564 1.00 2821 137 0.1791 0.2437 REMARK 3 9 2.3564 - 2.2657 1.00 2819 167 0.1823 0.1998 REMARK 3 10 2.2657 - 2.1875 1.00 2807 138 0.1912 0.1989 REMARK 3 11 2.1875 - 2.1191 0.99 2797 136 0.2014 0.2355 REMARK 3 12 2.1191 - 2.0586 0.94 2604 150 0.2054 0.2452 REMARK 3 13 2.0586 - 2.0044 0.74 2079 91 0.2155 0.2524 REMARK 3 14 2.0044 - 1.9555 0.50 1392 73 0.2178 0.2183 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 41.37 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.64900 REMARK 3 B22 (A**2) : 1.64900 REMARK 3 B33 (A**2) : -3.29800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3371 REMARK 3 ANGLE : 1.130 4585 REMARK 3 CHIRALITY : 0.063 551 REMARK 3 PLANARITY : 0.005 598 REMARK 3 DIHEDRAL : 12.373 1209 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 4:16) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2807 18.8359 35.1230 REMARK 3 T TENSOR REMARK 3 T11: 0.5238 T22: 0.0921 REMARK 3 T33: 0.6274 T12: 0.2785 REMARK 3 T13: -0.2258 T23: 0.0779 REMARK 3 L TENSOR REMARK 3 L11: 0.3690 L22: 1.2669 REMARK 3 L33: 0.4230 L12: -0.4494 REMARK 3 L13: 0.0308 L23: -0.1434 REMARK 3 S TENSOR REMARK 3 S11: -0.0367 S12: -0.0604 S13: -0.0619 REMARK 3 S21: 0.0392 S22: 0.0956 S23: -0.0990 REMARK 3 S31: 0.0309 S32: -0.0158 S33: 0.0299 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 17:43) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3633 26.6909 26.6653 REMARK 3 T TENSOR REMARK 3 T11: 0.3285 T22: 0.1093 REMARK 3 T33: 0.1770 T12: 0.0415 REMARK 3 T13: -0.0089 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 3.3876 L22: 2.4562 REMARK 3 L33: 1.7844 L12: 0.6723 REMARK 3 L13: 0.5369 L23: -0.1841 REMARK 3 S TENSOR REMARK 3 S11: 0.0552 S12: -0.1136 S13: -0.4552 REMARK 3 S21: -0.1124 S22: -0.0349 S23: -0.2388 REMARK 3 S31: 0.5498 S32: 0.2163 S33: -0.0433 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 44:62) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5513 17.7347 28.3728 REMARK 3 T TENSOR REMARK 3 T11: 0.6923 T22: 0.3180 REMARK 3 T33: 0.5413 T12: 0.2172 REMARK 3 T13: -0.0440 T23: -0.0490 REMARK 3 L TENSOR REMARK 3 L11: 3.5783 L22: 4.3739 REMARK 3 L33: 3.6627 L12: -1.9174 REMARK 3 L13: 1.0799 L23: -1.3722 REMARK 3 S TENSOR REMARK 3 S11: 0.3192 S12: 0.4344 S13: -0.4595 REMARK 3 S21: -1.0975 S22: -0.3285 S23: -0.0131 REMARK 3 S31: 0.6520 S32: 0.3905 S33: 0.0206 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 63:83) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6132 13.2096 29.3661 REMARK 3 T TENSOR REMARK 3 T11: 0.8001 T22: 0.3478 REMARK 3 T33: 0.6610 T12: 0.2421 REMARK 3 T13: -0.1499 T23: -0.1406 REMARK 3 L TENSOR REMARK 3 L11: 1.6577 L22: 1.3155 REMARK 3 L33: 6.3478 L12: -0.3072 REMARK 3 L13: -1.4786 L23: -2.2356 REMARK 3 S TENSOR REMARK 3 S11: 0.2109 S12: 0.2354 S13: -0.2979 REMARK 3 S21: -0.1256 S22: -0.0436 S23: 0.0470 REMARK 3 S31: 0.7689 S32: -0.2751 S33: 0.0232 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 84:133) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6375 21.5911 41.8100 REMARK 3 T TENSOR REMARK 3 T11: 0.4255 T22: 0.0362 REMARK 3 T33: 0.5020 T12: 0.2189 REMARK 3 T13: -0.2636 T23: 0.1484 REMARK 3 L TENSOR REMARK 3 L11: 1.3957 L22: 1.2602 REMARK 3 L33: 1.1996 L12: -0.4482 REMARK 3 L13: -0.1010 L23: -0.5791 REMARK 3 S TENSOR REMARK 3 S11: -0.0754 S12: -0.2943 S13: -0.4982 REMARK 3 S21: 0.3923 S22: 0.1074 S23: -0.9380 REMARK 3 S31: 0.7019 S32: 0.4173 S33: 0.0884 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 134:165) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6380 26.1873 55.4274 REMARK 3 T TENSOR REMARK 3 T11: 0.8169 T22: 0.6973 REMARK 3 T33: 0.3159 T12: 0.0436 REMARK 3 T13: 0.1145 T23: 0.0823 REMARK 3 L TENSOR REMARK 3 L11: 2.7512 L22: 4.5082 REMARK 3 L33: 4.3241 L12: -0.4537 REMARK 3 L13: -1.4373 L23: -1.2255 REMARK 3 S TENSOR REMARK 3 S11: -0.3461 S12: -0.7223 S13: -0.2134 REMARK 3 S21: 1.2064 S22: 0.2569 S23: 0.2971 REMARK 3 S31: 0.2910 S32: -0.4506 S33: 0.0024 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 166:195) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5380 14.5786 47.7107 REMARK 3 T TENSOR REMARK 3 T11: 0.5978 T22: 0.3761 REMARK 3 T33: 0.5264 T12: 0.1078 REMARK 3 T13: 0.0374 T23: 0.1731 REMARK 3 L TENSOR REMARK 3 L11: 2.0120 L22: 3.3763 REMARK 3 L33: 1.9628 L12: -0.5477 REMARK 3 L13: -0.0055 L23: 0.5176 REMARK 3 S TENSOR REMARK 3 S11: -0.3135 S12: -0.6119 S13: -0.9723 REMARK 3 S21: 0.8940 S22: 0.0308 S23: 0.2546 REMARK 3 S31: 0.5318 S32: -0.0048 S33: 0.1593 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 196:224) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3511 23.1291 49.0279 REMARK 3 T TENSOR REMARK 3 T11: 0.7380 T22: 0.3213 REMARK 3 T33: 0.3009 T12: 0.1061 REMARK 3 T13: -0.1446 T23: 0.1926 REMARK 3 L TENSOR REMARK 3 L11: 1.3376 L22: 1.3807 REMARK 3 L33: 1.4997 L12: -0.3860 REMARK 3 L13: 0.2217 L23: -1.1395 REMARK 3 S TENSOR REMARK 3 S11: -0.3771 S12: -0.5762 S13: -0.2515 REMARK 3 S21: 0.8181 S22: 0.1888 S23: -0.4719 REMARK 3 S31: 0.2161 S32: 0.0403 S33: 0.0442 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 225:280) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5089 45.1119 25.0835 REMARK 3 T TENSOR REMARK 3 T11: 0.1099 T22: 0.1400 REMARK 3 T33: 0.1070 T12: 0.0361 REMARK 3 T13: 0.0033 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.6020 L22: 1.8323 REMARK 3 L33: 1.6860 L12: 0.8719 REMARK 3 L13: -0.0550 L23: -0.2648 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: -0.0944 S13: -0.0107 REMARK 3 S21: 0.1034 S22: -0.0334 S23: -0.0412 REMARK 3 S31: 0.1039 S32: 0.3295 S33: -0.0112 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 281:291) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1162 48.3326 14.4401 REMARK 3 T TENSOR REMARK 3 T11: 0.0872 T22: 0.3482 REMARK 3 T33: 0.0886 T12: 0.0303 REMARK 3 T13: 0.0277 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 2.9004 L22: 7.2218 REMARK 3 L33: 1.7749 L12: 2.7876 REMARK 3 L13: -0.4766 L23: -1.3121 REMARK 3 S TENSOR REMARK 3 S11: 0.1391 S12: -0.1755 S13: 0.2122 REMARK 3 S21: 0.2091 S22: -0.3214 S23: -0.1408 REMARK 3 S31: -0.0941 S32: 0.5157 S33: 0.0810 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 292:333) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4062 48.7677 7.3233 REMARK 3 T TENSOR REMARK 3 T11: 0.0948 T22: 0.1932 REMARK 3 T33: 0.1184 T12: 0.0148 REMARK 3 T13: 0.0102 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 1.5828 L22: 0.7112 REMARK 3 L33: 1.5187 L12: -0.4812 REMARK 3 L13: 0.1399 L23: -0.4007 REMARK 3 S TENSOR REMARK 3 S11: 0.0163 S12: 0.0796 S13: 0.0728 REMARK 3 S21: -0.1863 S22: -0.0147 S23: -0.1016 REMARK 3 S31: 0.1453 S32: 0.6299 S33: -0.0092 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 334:343) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5412 49.0426 0.0258 REMARK 3 T TENSOR REMARK 3 T11: 0.1318 T22: 0.3195 REMARK 3 T33: 0.1156 T12: 0.0457 REMARK 3 T13: 0.0225 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 4.0292 L22: 5.3668 REMARK 3 L33: 0.8541 L12: 4.3383 REMARK 3 L13: 0.0333 L23: -0.3820 REMARK 3 S TENSOR REMARK 3 S11: -0.0033 S12: -0.0824 S13: -0.3194 REMARK 3 S21: 0.0496 S22: -0.1218 S23: -0.7948 REMARK 3 S31: 0.1341 S32: 0.7194 S33: 0.0767 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 344:388) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0869 47.2909 -7.3706 REMARK 3 T TENSOR REMARK 3 T11: 0.1081 T22: 0.1853 REMARK 3 T33: 0.1181 T12: 0.0326 REMARK 3 T13: 0.0095 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 3.1243 L22: 0.8029 REMARK 3 L33: 2.0444 L12: -0.1456 REMARK 3 L13: -0.2488 L23: -0.5177 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: 0.1592 S13: -0.1219 REMARK 3 S21: -0.1464 S22: -0.0079 S23: -0.0980 REMARK 3 S31: 0.2247 S32: 0.4233 S33: -0.0487 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 389:437) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3695 47.3548 -18.6103 REMARK 3 T TENSOR REMARK 3 T11: 0.1446 T22: 0.2328 REMARK 3 T33: 0.0992 T12: 0.0361 REMARK 3 T13: 0.0195 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 2.6801 L22: 2.1656 REMARK 3 L33: 2.4190 L12: 0.0852 REMARK 3 L13: -0.3006 L23: -0.5894 REMARK 3 S TENSOR REMARK 3 S11: 0.0989 S12: 0.1061 S13: -0.1051 REMARK 3 S21: -0.1312 S22: -0.0936 S23: -0.1921 REMARK 3 S31: 0.1825 S32: 0.4161 S33: -0.0136 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN A AND RESID 438:449) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2807 59.3019 -28.5311 REMARK 3 T TENSOR REMARK 3 T11: 0.4313 T22: 0.6275 REMARK 3 T33: 0.1649 T12: 0.1995 REMARK 3 T13: -0.0327 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 3.8663 L22: 2.5199 REMARK 3 L33: -0.0002 L12: -2.2164 REMARK 3 L13: -0.0516 L23: 0.0628 REMARK 3 S TENSOR REMARK 3 S11: 0.2218 S12: 0.2007 S13: -0.2545 REMARK 3 S21: -0.2637 S22: 0.2051 S23: 0.0737 REMARK 3 S31: -0.0581 S32: 0.4805 S33: -0.0195 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FCE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072725. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42078 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3FWW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MG ACETATE 10% PEG 8000, PH 7, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 125.68400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 125.68400 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 125.68400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 125.68400 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 125.68400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 125.68400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 49360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 43.78550 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 75.83871 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -43.78550 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 75.83871 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 501 LIES ON A SPECIAL POSITION. REMARK 375 MG MG A 502 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 883 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 921 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 923 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 ALA A 67 REMARK 465 ASP A 68 REMARK 465 PRO A 69 REMARK 465 SER A 70 REMARK 465 LEU A 71 REMARK 465 LYS A 450 REMARK 465 ARG A 451 REMARK 465 PRO A 452 REMARK 465 VAL A 453 REMARK 465 LYS A 454 REMARK 465 LYS A 455 REMARK 465 LYS A 456 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 4 OG REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLN A 79 CG CD OE1 NE2 REMARK 470 LEU A 80 CG CD1 CD2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 ARG A 178 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 190 CG OD1 ND2 REMARK 470 GLN A 193 CG CD OE1 NE2 REMARK 470 GLU A 195 CG CD OE1 OE2 REMARK 470 TYR A 197 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 ARG A 429 NE CZ NH1 NH2 REMARK 470 ARG A 440 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 442 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 354 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 79 79.00 -63.96 REMARK 500 PRO A 311 150.80 -49.44 REMARK 500 ASP A 321 -167.92 -79.74 REMARK 500 ALA A 390 -48.14 -130.34 REMARK 500 ASN A 434 19.71 58.70 REMARK 500 ARG A 440 76.49 -106.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 406 OD1 REMARK 620 2 HOH A 658 O 92.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 406 OD2 REMARK 620 2 HOH A 948 O 88.9 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FWW RELATED DB: PDB REMARK 900 RELATED ID: CSGID-IDP00427 RELATED DB: TARGETTRACK DBREF 4FCE A 1 456 UNP Q663R0 GLMU_YERPS 1 456 SEQADV 4FCE SER A -2 UNP Q663R0 EXPRESSION TAG SEQADV 4FCE ASN A -1 UNP Q663R0 EXPRESSION TAG SEQADV 4FCE ALA A 0 UNP Q663R0 EXPRESSION TAG SEQRES 1 A 459 SER ASN ALA MET SER ASN SER SER MET SER VAL VAL ILE SEQRES 2 A 459 LEU ALA ALA GLY LYS GLY THR ARG MET TYR SER ASP LEU SEQRES 3 A 459 PRO LYS VAL LEU HIS PRO LEU ALA GLY LYS PRO MET VAL SEQRES 4 A 459 GLN HIS VAL ILE ASP ALA ALA MET LYS LEU GLY ALA GLN SEQRES 5 A 459 HIS VAL HIS LEU VAL TYR GLY HIS GLY GLY GLU LEU LEU SEQRES 6 A 459 LYS LYS THR LEU ALA ASP PRO SER LEU ASN TRP VAL LEU SEQRES 7 A 459 GLN ALA GLU GLN LEU GLY THR GLY HIS ALA MET GLN GLN SEQRES 8 A 459 ALA ALA PRO HIS PHE ALA ASP ASP GLU ASP ILE LEU MET SEQRES 9 A 459 LEU TYR GLY ASP VAL PRO LEU ILE SER VAL ASP THR LEU SEQRES 10 A 459 GLN ARG LEU LEU ALA ALA LYS PRO GLU GLY GLY ILE GLY SEQRES 11 A 459 LEU LEU THR VAL LYS LEU ASP ASN PRO SER GLY TYR GLY SEQRES 12 A 459 ARG ILE VAL ARG GLU ASN GLY ASP VAL VAL GLY ILE VAL SEQRES 13 A 459 GLU HIS LYS ASP ALA SER ASP ALA GLN ARG GLU ILE ASN SEQRES 14 A 459 GLU ILE ASN THR GLY ILE LEU VAL ALA ASN GLY ARG ASP SEQRES 15 A 459 LEU LYS ARG TRP LEU SER LEU LEU ASP ASN ASN ASN ALA SEQRES 16 A 459 GLN GLY GLU PHE TYR ILE THR ASP ILE ILE ALA LEU ALA SEQRES 17 A 459 HIS ALA ASP GLY LYS LYS ILE ALA THR VAL HIS PRO THR SEQRES 18 A 459 ARG LEU SER GLU VAL GLU GLY VAL ASN ASN ARG LEU GLN SEQRES 19 A 459 LEU SER ALA LEU GLU ARG VAL PHE GLN THR GLU GLN ALA SEQRES 20 A 459 GLU LYS LEU LEU LEU ALA GLY VAL MET LEU LEU ASP PRO SEQRES 21 A 459 SER ARG PHE ASP LEU ARG GLY GLU LEU THR HIS GLY ARG SEQRES 22 A 459 ASP ILE THR ILE ASP THR ASN VAL ILE ILE GLU GLY HIS SEQRES 23 A 459 VAL ILE LEU GLY ASP ARG VAL ARG ILE GLY THR GLY CYS SEQRES 24 A 459 VAL LEU LYS ASN CYS VAL ILE GLY ASP ASP SER GLU ILE SEQRES 25 A 459 SER PRO TYR THR VAL LEU GLU ASP ALA ARG LEU ASP ALA SEQRES 26 A 459 ASN CYS THR VAL GLY PRO PHE ALA ARG LEU ARG PRO GLY SEQRES 27 A 459 ALA GLU LEU ALA GLU GLY ALA HIS VAL GLY ASN PHE VAL SEQRES 28 A 459 GLU ILE LYS LYS ALA ARG LEU GLY LYS GLY SER LYS ALA SEQRES 29 A 459 GLY HIS LEU SER TYR LEU GLY ASP ALA GLU ILE GLY ALA SEQRES 30 A 459 GLY VAL ASN ILE GLY ALA GLY THR ILE THR CYS ASN TYR SEQRES 31 A 459 ASP GLY ALA ASN LYS PHE LYS THR ILE ILE GLY ASP ASP SEQRES 32 A 459 VAL PHE VAL GLY SER ASP THR GLN LEU VAL ALA PRO VAL SEQRES 33 A 459 THR VAL ALA ASN GLY ALA THR ILE GLY ALA GLY THR THR SEQRES 34 A 459 VAL THR ARG ASP VAL ALA GLU ASN GLU LEU VAL ILE SER SEQRES 35 A 459 ARG VAL LYS GLN VAL HIS ILE GLN GLY TRP LYS ARG PRO SEQRES 36 A 459 VAL LYS LYS LYS HET MG A 501 1 HET MG A 502 1 HET GP1 A 503 16 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HETNAM MG MAGNESIUM ION HETNAM GP1 2-AMINO-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETSYN GP1 GLUCOSAMINE 1-PHOSPHATE; 1-O-PHOSPHONO-ALPHA-D- HETSYN 2 GP1 GLUCOSAMINE; 2-AMINO-2-DEOXY-1-O-PHOSPHONO-ALPHA-D- HETSYN 3 GP1 GLUCOSE; 2-AMINO-2-DEOXY-1-O-PHOSPHONO-D-GLUCOSE; 2- HETSYN 4 GP1 AMINO-2-DEOXY-1-O-PHOSPHONO-GLUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG 2(MG 2+) FORMUL 4 GP1 C6 H14 N O8 P FORMUL 5 EDO 3(C2 H6 O2) FORMUL 8 HOH *348(H2 O) HELIX 1 1 GLY A 16 TYR A 20 5 5 HELIX 2 2 PRO A 24 LEU A 27 5 4 HELIX 3 3 MET A 35 GLY A 47 1 13 HELIX 4 4 GLY A 58 LEU A 66 1 9 HELIX 5 5 GLY A 81 ALA A 90 1 10 HELIX 6 6 PRO A 91 PHE A 93 5 3 HELIX 7 7 SER A 110 LYS A 121 1 12 HELIX 8 8 GLU A 154 ALA A 158 5 5 HELIX 9 9 ALA A 161 ILE A 165 5 5 HELIX 10 10 GLY A 177 LEU A 186 1 10 HELIX 11 11 THR A 199 ASP A 208 1 10 HELIX 12 12 ARG A 219 GLU A 224 5 6 HELIX 13 13 ASN A 228 GLY A 251 1 24 HELIX 14 14 ASP A 256 SER A 258 5 3 LINK OD1 ASP A 406 MG MG A 501 1555 1555 2.06 LINK OD2 ASP A 406 MG MG A 502 1555 1555 2.19 LINK MG MG A 501 O HOH A 658 1555 1555 2.14 LINK MG MG A 502 O HOH A 948 1555 1555 2.00 CISPEP 1 GLY A 327 PRO A 328 0 -0.81 CISPEP 2 ALA A 411 PRO A 412 0 -0.41 CRYST1 87.571 87.571 251.368 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011419 0.006593 0.000000 0.00000 SCALE2 0.000000 0.013186 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003978 0.00000