HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-MAY-12 4FD0 TITLE CRYSTAL STRUCTURE OF A PUTATIVE CELL SURFACE PROTEIN (BACCAC_03700) TITLE 2 FROM BACTEROIDES CACCAE ATCC 43185 AT 2.07 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE RICH HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 26-428; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES CACCAE; SOURCE 3 ORGANISM_TAXID: 411901; SOURCE 4 ATCC: 43185; SOURCE 5 GENE: BACCAC_03700; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PUTATIVE CELL SURFACE PROTEIN, BIG3 DOMAIN, LRR DOMAIN, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4FD0 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4FD0 1 REMARK REVDAT 2 24-DEC-14 4FD0 1 TITLE REVDAT 1 25-JUL-12 4FD0 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A LEUCINE RICH HYPOTHETICAL PROTEIN JRNL TITL 2 (BACCAC_03700) FROM BACTEROIDES CACCAE ATCC 43185 AT 2.07 A JRNL TITL 3 RESOLUTION (CASP TARGET) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 42003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2118 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.12 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.50 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3145 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2236 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3006 REMARK 3 BIN R VALUE (WORKING SET) : 0.2228 REMARK 3 BIN FREE R VALUE : 0.2406 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.42 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 139 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3032 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 81 REMARK 3 SOLVENT ATOMS : 460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.29840 REMARK 3 B22 (A**2) : -11.36760 REMARK 3 B33 (A**2) : 9.06920 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.231 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3213 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4388 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1490 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 86 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 455 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3213 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 439 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3946 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.14 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.90 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.58 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 3. CHLORIDE, SULFATE MODELED WERE PRESENT IN THE REMARK 3 PROTEIN/CRYSTALLIZATION CONDITIONS. REMARK 4 REMARK 4 4FD0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072747. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97932,0.91837,0.97862 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE DECEMBER 29, 2011 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42010 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 46.029 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.81800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.200M LITHIUM SULFATE, 2.00M AMMONIUM REMARK 280 SULFATE, 0.1M CAPS PH 10.5, NANODROP, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.62050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.05150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.97700 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.62050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.05150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.97700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.62050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.05150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.97700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.62050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.05150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 76.97700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 26 REMARK 465 THR A 27 REMARK 465 GLU A 28 REMARK 465 ASN A 29 REMARK 465 ASP A 30 REMARK 465 GLU A 31 REMARK 465 TYR A 32 REMARK 465 LYS A 33 REMARK 465 LYS A 34 REMARK 465 ASP A 35 REMARK 465 SER A 36 REMARK 465 PRO A 37 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 38 OG REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 209 97.23 -69.08 REMARK 500 GLN A 247 14.85 57.31 REMARK 500 GLN A 247 15.05 56.92 REMARK 500 ASN A 313 119.34 -164.47 REMARK 500 CYS A 326 78.64 -113.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 516 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 517 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-423572 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4FDW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A LEUCINE RICH HYPOTHETICAL PROTEIN (BACOVA_ REMARK 900 01565) FROM BACTEROIDES OVATUS ATCC 8483 AT 2.05 A RESOLUTION - REMARK 900 ORTHOLOG REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 26-428) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4FD0 A 26 428 UNP A5ZLA0 A5ZLA0_9BACE 26 428 SEQADV 4FD0 GLY A 0 UNP A5ZLA0 EXPRESSION TAG SEQRES 1 A 404 GLY SER THR GLU ASN ASP GLU TYR LYS LYS ASP SER PRO SEQRES 2 A 404 SER ALA GLU ASN PRO ALA GLU PRO VAL GLY ALA LEU LEU SEQRES 3 A 404 GLU ASP PHE SER ILE GLU GLN LEU PRO ALA LYS THR ILE SEQRES 4 A 404 TYR ALA LEU GLY GLU ASN ILE ASP LEU THR GLY LEU ASN SEQRES 5 A 404 VAL THR GLY LYS TYR ASP ASP GLY LYS GLN ARG PRO VAL SEQRES 6 A 404 LYS VAL THR PRO GLU GLN ILE SER GLY PHE SER SER SER SEQRES 7 A 404 ALA PRO VAL ASP LYS GLN GLU VAL THR ILE THR ILE GLU SEQRES 8 A 404 GLY LYS GLN LYS SER PHE SER VAL GLN ILE SER PRO VAL SEQRES 9 A 404 ARG VAL GLU ASN GLY VAL LEU THR GLU VAL LEU LYS GLY SEQRES 10 A 404 HIS ASN GLU ILE ILE LEU PRO ASN SER VAL LYS SER ILE SEQRES 11 A 404 PRO LYS ALA ALA PHE ARG GLY SER GLN ILE ASN LYS VAL SEQRES 12 A 404 VAL LEU ASN GLU GLY LEU GLN SER ILE GLY ASP MSE ALA SEQRES 13 A 404 PHE PHE ASN SER THR VAL GLN GLU VAL VAL PHE PRO THR SEQRES 14 A 404 THR LEU GLU GLN LEU GLU GLU ASN ILE PHE TYR TYR CYS SEQRES 15 A 404 ARG ASN LEU LYS LYS ALA ASP LEU SER ARG THR LYS LEU SEQRES 16 A 404 THR LYS LEU PRO ALA SER THR PHE VAL TYR ALA GLY VAL SEQRES 17 A 404 GLU GLU VAL LEU LEU PRO ALA THR LEU LYS GLU ILE GLY SEQRES 18 A 404 ALA GLN ALA PHE LEU LYS THR SER GLN LEU LYS THR ILE SEQRES 19 A 404 GLU ILE PRO GLU ASN VAL ARG THR ILE GLY LEU GLU ALA SEQRES 20 A 404 PHE ARG GLU SER GLY ILE THR THR VAL LYS LEU PRO ASN SEQRES 21 A 404 GLY VAL THR THR ILE ALA GLN ARG ALA PHE TYR TYR CYS SEQRES 22 A 404 PRO GLU LEU THR GLU VAL THR THR TYR GLY THR VAL ILE SEQRES 23 A 404 ASN GLU ASN PRO GLU ALA MSE ILE HIS PRO TYR CYS LEU SEQRES 24 A 404 GLU GLY CYS PRO LYS LEU THR ARG PHE ASP ILE SER LYS SEQRES 25 A 404 SER ILE ARG ILE LEU GLY GLN GLY LEU LEU GLY GLY ASN SEQRES 26 A 404 ARG LYS VAL THR GLN LEU THR ILE PRO ALA ASN VAL THR SEQRES 27 A 404 GLN ILE ASN PHE SER ALA PHE ASN ASN THR GLY ILE LYS SEQRES 28 A 404 GLU VAL MSE VAL GLU GLY ILE THR PRO PRO GLN VAL PHE SEQRES 29 A 404 GLU LYS VAL TRP TYR GLY PHE PRO ASP ASP ILE THR VAL SEQRES 30 A 404 ILE ARG VAL PRO ALA GLU SER VAL GLU LYS TYR LYS ASN SEQRES 31 A 404 ALA ASN GLY TRP LYS ASP PHE THR ASN LYS ILE THR ALA SEQRES 32 A 404 PHE MODRES 4FD0 MSE A 179 MET SELENOMETHIONINE MODRES 4FD0 MSE A 317 MET SELENOMETHIONINE MODRES 4FD0 MSE A 378 MET SELENOMETHIONINE HET MSE A 179 8 HET MSE A 317 8 HET MSE A 378 8 HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 A 506 5 HET SO4 A 507 5 HET SO4 A 508 5 HET SO4 A 509 5 HET SO4 A 510 5 HET SO4 A 511 5 HET SO4 A 512 5 HET SO4 A 513 5 HET SO4 A 514 5 HET SO4 A 515 5 HET SO4 A 516 5 HET CL A 517 1 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 SO4 16(O4 S 2-) FORMUL 18 CL CL 1- FORMUL 19 HOH *460(H2 O) HELIX 1 1 THR A 92 GLU A 94 5 3 HELIX 2 2 SER A 408 ALA A 415 1 8 HELIX 3 3 GLY A 417 ASN A 423 5 7 SHEET 1 A 3 LEU A 50 GLN A 57 0 SHEET 2 A 3 ASN A 76 TYR A 81 -1 O LYS A 80 N GLU A 51 SHEET 3 A 3 GLN A 86 VAL A 89 -1 O ARG A 87 N GLY A 79 SHEET 1 B 4 ILE A 63 TYR A 64 0 SHEET 2 B 4 LYS A 117 ILE A 125 1 O GLN A 124 N TYR A 64 SHEET 3 B 4 VAL A 105 ILE A 114 -1 N VAL A 110 O PHE A 121 SHEET 4 B 4 ILE A 96 SER A 97 -1 N SER A 97 O THR A 111 SHEET 1 C 2 VAL A 128 GLU A 131 0 SHEET 2 C 2 VAL A 134 VAL A 138 -1 O GLU A 137 N ARG A 129 SHEET 1 D 3 GLU A 144 ILE A 146 0 SHEET 2 D 3 LYS A 166 VAL A 168 1 O VAL A 168 N ILE A 145 SHEET 3 D 3 GLU A 188 VAL A 190 1 O VAL A 190 N VAL A 167 SHEET 1 E 3 SER A 153 ILE A 154 0 SHEET 2 E 3 SER A 175 ILE A 176 1 O SER A 175 N ILE A 154 SHEET 3 E 3 GLN A 197 LEU A 198 1 O GLN A 197 N ILE A 176 SHEET 1 F 2 LYS A 211 ASP A 213 0 SHEET 2 F 2 GLU A 234 LEU A 236 1 O LEU A 236 N ALA A 212 SHEET 1 G 7 LYS A 221 LEU A 222 0 SHEET 2 G 7 GLU A 243 ILE A 244 1 O GLU A 243 N LEU A 222 SHEET 3 G 7 THR A 266 ILE A 267 1 O THR A 266 N ILE A 244 SHEET 4 G 7 THR A 288 ILE A 289 1 O THR A 288 N ILE A 267 SHEET 5 G 7 MSE A 317 ILE A 318 1 O MSE A 317 N ILE A 289 SHEET 6 G 7 ILE A 340 LEU A 341 1 O ILE A 340 N ILE A 318 SHEET 7 G 7 GLN A 363 ILE A 364 1 O GLN A 363 N LEU A 341 SHEET 1 H 4 ILE A 258 GLU A 259 0 SHEET 2 H 4 THR A 279 PRO A 283 1 O LYS A 281 N ILE A 258 SHEET 3 H 4 GLU A 302 TYR A 306 1 O THR A 304 N VAL A 280 SHEET 4 H 4 ARG A 331 PHE A 332 1 O ARG A 331 N VAL A 303 SHEET 1 I 4 GLN A 354 ILE A 357 0 SHEET 2 I 4 GLU A 376 VAL A 379 1 O MSE A 378 N ILE A 357 SHEET 3 I 4 VAL A 401 PRO A 405 1 O ARG A 403 N VAL A 377 SHEET 4 I 4 ILE A 425 PHE A 428 1 O THR A 426 N VAL A 404 LINK C ASP A 178 N MSE A 179 1555 1555 1.35 LINK C MSE A 179 N ALA A 180 1555 1555 1.35 LINK C ALA A 316 N MSE A 317 1555 1555 1.34 LINK C MSE A 317 N ILE A 318 1555 1555 1.34 LINK C VAL A 377 N MSE A 378 1555 1555 1.33 LINK C MSE A 378 N VAL A 379 1555 1555 1.34 SITE 1 AC1 4 LYS A 85 ARG A 87 HOH A 798 HOH A 817 SITE 1 AC2 3 ASN A 208 HOH A 781 HOH A1018 SITE 1 AC3 2 ARG A 265 ASN A 313 SITE 1 AC4 6 ARG A 265 THR A 287 THR A 288 ASN A 313 SITE 2 AC4 6 GLU A 315 ALA A 316 SITE 1 AC5 6 GLN A 291 MSE A 317 HIS A 319 PRO A 320 SITE 2 AC5 6 HOH A1036 HOH A1043 SITE 1 AC6 8 GLN A 118 GLU A 389 LYS A 390 VAL A 391 SITE 2 AC6 8 HOH A 785 HOH A 788 HOH A 794 HOH A 818 SITE 1 AC7 4 SER A 100 SER A 101 SER A 102 HOH A 851 SITE 1 AC8 4 ALA A 359 GLY A 381 ILE A 382 THR A 383 SITE 1 AC9 6 HIS A 142 ASN A 143 GLU A 144 HOH A 837 SITE 2 AC9 6 HOH A 916 HOH A1014 SITE 1 BC1 5 ARG A 160 HOH A 786 HOH A 806 HOH A 931 SITE 2 BC1 5 HOH A 948 SITE 1 BC2 2 LYS A 156 ARG A 160 SITE 1 BC3 5 LYS A 221 ALA A 224 GLY A 245 ALA A 246 SITE 2 BC3 5 HOH A 736 SITE 1 BC4 2 ASP A 106 LYS A 107 SITE 1 BC5 1 ARG A 350 SITE 1 BC6 3 ASN A 143 HOH A 761 HOH A 908 SITE 1 BC7 3 PRO A 314 ARG A 339 HOH A 977 SITE 1 BC8 1 ASN A 69 CRYST1 87.241 104.103 153.954 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011463 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009606 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006495 0.00000