HEADER HYDROLASE 29-MAY-12 4FDM TITLE CRYSTALLIZATION AND 3D STRUCTURE ELUCIDATION OF THERMOSTABLE L2 LIPASE TITLE 2 FROM THERMOPHILIC LOCALLY ISOLATED BACILLUS SP. L2. COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMOSTABLE LIPASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 29-416; COMPND 5 EC: 3.1.1.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SP. L2; SOURCE 3 ORGANISM_TAXID: 307644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PQE-30UA KEYWDS THERMOSTABLE LIPASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.N.Z.R.A.RAHMAN,F.M.SHARIFF,A.B.SALLEH,M.B.BASRI REVDAT 2 13-SEP-23 4FDM 1 REMARK SEQADV LINK REVDAT 1 08-MAY-13 4FDM 0 JRNL AUTH R.N.ABD RAHMAN,F.M.SHARIFF,M.BASRI,A.B.SALLEH JRNL TITL 3D STRUCTURE ELUCIDATION OF THERMOSTABLE L2 LIPASE FROM JRNL TITL 2 THERMOPHILIC BACILLUS SP. L2. JRNL REF INT.J.MOL.SCI. V. 13 9207 2012 JRNL REFN ESSN 1422-0067 JRNL PMID 22942761 JRNL DOI 10.3390/IJMS13079207 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 62046 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3322 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4497 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 235 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2982 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 274 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.071 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.044 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.260 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; 0.014 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; 1.451 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; 5.512 ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ;32.353 ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ;12.913 ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ;20.992 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4FDM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072768. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77987 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.3 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2DSN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 6000, 50MM MES, 50MM NACL, REMARK 280 COUNTER-DIFFUSION, TEMPERATURE 293.15K, PH 6.5, LIQUID DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.98850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.68700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.89200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.68700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.98850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.89200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 ALA A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 ARG A 4 REMARK 465 ALA A 5 REMARK 465 ASN A 6 REMARK 465 ASP A 7 REMARK 465 LEU A 386 REMARK 465 LEU A 387 REMARK 465 PRO A 388 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB THR A 17 O HOH A 714 1.85 REMARK 500 CG2 THR A 278 O HOH A 695 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 277 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 LEU A 307 CA - CB - CG ANGL. DEV. = 15.9 DEGREES REMARK 500 ASP A 357 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 113 -136.91 58.55 REMARK 500 ASP A 175 46.35 -106.73 REMARK 500 VAL A 203 -61.01 67.57 REMARK 500 ARG A 271 43.51 -147.54 REMARK 500 ASP A 310 -162.56 -116.63 REMARK 500 ILE A 319 -40.18 -135.78 REMARK 500 ASN A 367 89.75 -164.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 61 OD1 REMARK 620 2 HIS A 81 NE2 97.9 REMARK 620 3 HIS A 87 NE2 117.9 104.8 REMARK 620 4 ASP A 238 OD2 127.8 108.1 98.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 286 O REMARK 620 2 GLU A 360 OE2 81.3 REMARK 620 3 ASP A 365 OD2 101.1 106.7 REMARK 620 4 PRO A 366 O 171.6 92.6 86.1 REMARK 620 5 HOH A 617 O 88.0 163.9 87.1 96.7 REMARK 620 6 HOH A 628 O 87.1 86.0 165.7 86.8 81.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402 DBREF 4FDM A 1 388 UNP Q5I4I3 Q5I4I3_9BACI 29 416 SEQADV 4FDM HIS A -5 UNP Q5I4I3 EXPRESSION TAG SEQADV 4FDM HIS A -4 UNP Q5I4I3 EXPRESSION TAG SEQADV 4FDM HIS A -3 UNP Q5I4I3 EXPRESSION TAG SEQADV 4FDM HIS A -2 UNP Q5I4I3 EXPRESSION TAG SEQADV 4FDM HIS A -1 UNP Q5I4I3 EXPRESSION TAG SEQADV 4FDM HIS A 0 UNP Q5I4I3 EXPRESSION TAG SEQRES 1 A 394 HIS HIS HIS HIS HIS HIS ALA SER LEU ARG ALA ASN ASP SEQRES 2 A 394 ALA PRO ILE VAL LEU LEU HIS GLY PHE THR GLY TRP GLY SEQRES 3 A 394 ARG GLU GLU MET PHE GLY PHE LYS TYR TRP GLY GLY VAL SEQRES 4 A 394 ARG GLY ASP ILE GLU GLN TRP LEU ASN ASP ASN GLY TYR SEQRES 5 A 394 ARG THR TYR THR LEU ALA VAL GLY PRO LEU SER SER ASN SEQRES 6 A 394 TRP ASP ARG ALA CYS GLU ALA TYR ALA GLN LEU VAL GLY SEQRES 7 A 394 GLY THR VAL ASP TYR GLY ALA ALA HIS ALA ALA LYS HIS SEQRES 8 A 394 GLY HIS ALA ARG PHE GLY ARG THR TYR PRO GLY LEU LEU SEQRES 9 A 394 PRO GLU LEU LYS ARG GLY GLY ARG ILE HIS ILE ILE ALA SEQRES 10 A 394 HIS SER GLN GLY GLY GLN THR ALA ARG MET LEU VAL SER SEQRES 11 A 394 LEU LEU GLU ASN GLY SER GLN GLU GLU ARG GLU TYR ALA SEQRES 12 A 394 LYS ALA HIS ASN VAL SER LEU SER PRO LEU PHE GLU GLY SEQRES 13 A 394 GLY HIS HIS PHE VAL LEU SER VAL THR THR ILE ALA THR SEQRES 14 A 394 PRO HIS ASP GLY THR THR LEU VAL ASN MET VAL ASP PHE SEQRES 15 A 394 THR ASP ARG PHE PHE ASP LEU GLN LYS ALA VAL LEU GLU SEQRES 16 A 394 ALA ALA ALA VAL ALA SER ASN VAL PRO TYR THR SER GLN SEQRES 17 A 394 VAL TYR ASP PHE LYS LEU ASP GLN TRP GLY LEU ARG ARG SEQRES 18 A 394 GLN PRO GLY GLU SER PHE ASP HIS TYR PHE GLU ARG LEU SEQRES 19 A 394 LYS ARG SER PRO VAL TRP THR SER THR ASP THR ALA ARG SEQRES 20 A 394 TYR ASP LEU SER VAL SER GLY ALA GLU LYS LEU ASN GLN SEQRES 21 A 394 TRP VAL GLN ALA SER PRO ASN THR TYR TYR LEU SER PHE SEQRES 22 A 394 SER THR GLU ARG THR TYR ARG GLY ALA LEU THR GLY ASN SEQRES 23 A 394 HIS TYR PRO GLU LEU GLY MET ASN ALA PHE SER ALA VAL SEQRES 24 A 394 VAL CYS ALA PRO PHE LEU GLY SER TYR ARG ASN PRO THR SEQRES 25 A 394 LEU GLY ILE ASP ASP ARG TRP LEU GLU ASN ASP GLY ILE SEQRES 26 A 394 VAL ASN THR VAL SER MET ASN GLY PRO LYS ARG GLY SER SEQRES 27 A 394 SER ASP ARG ILE VAL PRO TYR ASP GLY THR LEU LYS LYS SEQRES 28 A 394 GLY VAL TRP ASN ASP MET GLY THR TYR ASN VAL ASP HIS SEQRES 29 A 394 LEU GLU ILE ILE GLY VAL ASP PRO ASN PRO SER PHE ASP SEQRES 30 A 394 ILE ARG ALA PHE TYR LEU ARG LEU ALA GLU GLN LEU ALA SEQRES 31 A 394 SER LEU LEU PRO HET ZN A 401 1 HET CA A 402 1 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION FORMUL 2 ZN ZN 2+ FORMUL 3 CA CA 2+ FORMUL 4 HOH *274(H2 O) HELIX 1 1 GLU A 23 PHE A 27 5 5 HELIX 2 2 GLY A 31 GLY A 35 5 5 HELIX 3 3 ASP A 36 ASN A 44 1 9 HELIX 4 4 SER A 58 GLY A 72 1 15 HELIX 5 5 GLY A 78 GLY A 86 1 9 HELIX 6 6 LEU A 98 ARG A 103 5 6 HELIX 7 7 GLN A 114 GLY A 129 1 16 HELIX 8 8 SER A 130 ASN A 141 1 12 HELIX 9 9 SER A 145 GLU A 149 5 5 HELIX 10 10 THR A 168 MET A 173 5 6 HELIX 11 11 ASP A 175 ALA A 191 1 17 HELIX 12 12 LEU A 208 GLY A 212 5 5 HELIX 13 13 SER A 220 ARG A 230 1 11 HELIX 14 14 SER A 231 SER A 236 1 6 HELIX 15 15 THR A 239 SER A 245 1 7 HELIX 16 16 SER A 245 VAL A 256 1 12 HELIX 17 17 ASN A 288 CYS A 295 1 8 HELIX 18 18 CYS A 295 GLY A 300 1 6 HELIX 19 19 ASN A 304 GLY A 308 5 5 HELIX 20 20 ASP A 310 LEU A 314 5 5 HELIX 21 21 ASN A 321 ASN A 326 5 6 HELIX 22 22 ASP A 371 SER A 385 1 15 SHEET 1 A 7 THR A 48 LEU A 51 0 SHEET 2 A 7 ILE A 10 LEU A 13 1 N LEU A 12 O LEU A 51 SHEET 3 A 7 ILE A 107 HIS A 112 1 O HIS A 108 N VAL A 11 SHEET 4 A 7 VAL A 155 ILE A 161 1 O THR A 159 N ILE A 109 SHEET 5 A 7 TYR A 263 THR A 269 1 O LEU A 265 N THR A 160 SHEET 6 A 7 TRP A 348 TYR A 354 1 O ASN A 349 N TYR A 264 SHEET 7 A 7 ILE A 336 PRO A 338 1 N VAL A 337 O TRP A 348 SHEET 1 B 2 GLY A 73 ASP A 76 0 SHEET 2 B 2 PHE A 90 TYR A 94 -1 O ARG A 92 N VAL A 75 SHEET 1 C 2 THR A 272 ARG A 274 0 SHEET 2 C 2 HIS A 281 PRO A 283 -1 O TYR A 282 N TYR A 273 LINK OD1 ASP A 61 ZN ZN A 401 1555 1555 1.98 LINK NE2 HIS A 81 ZN ZN A 401 1555 1555 2.02 LINK NE2 HIS A 87 ZN ZN A 401 1555 1555 2.05 LINK OD2 ASP A 238 ZN ZN A 401 1555 1555 1.92 LINK O GLY A 286 CA CA A 402 1555 1555 2.26 LINK OE2 GLU A 360 CA CA A 402 1555 1555 2.34 LINK OD2 ASP A 365 CA CA A 402 1555 1555 2.42 LINK O PRO A 366 CA CA A 402 1555 1555 2.35 LINK CA CA A 402 O HOH A 617 1555 1555 2.40 LINK CA CA A 402 O HOH A 628 1555 1555 2.59 SITE 1 AC1 4 ASP A 61 HIS A 81 HIS A 87 ASP A 238 SITE 1 AC2 6 GLY A 286 GLU A 360 ASP A 365 PRO A 366 SITE 2 AC2 6 HOH A 617 HOH A 628 CRYST1 71.977 81.784 83.374 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013893 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012227 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011994 0.00000