HEADER HYDROLASE 29-MAY-12 4FDY TITLE CRYSTAL STRUCTURE OF A SIMILAR TO LIPOPROTEIN, NLP/P60 FAMILY TITLE 2 (SAV0400) FROM STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50 AT 2.23 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIMILAR TO LIPOPROTEIN, NLP/P60 FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 STRAIN: MU50; SOURCE 5 GENE: SAV0400; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS SLT/LYSOZYME-LIKE MURAMIDASE, NLPC/P60 LD ENDOPEPTIDASE, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4FDY 1 SEQADV LINK REVDAT 4 15-NOV-17 4FDY 1 REMARK REVDAT 3 08-JAN-14 4FDY 1 JRNL REVDAT 2 04-DEC-13 4FDY 1 JRNL REVDAT 1 25-JUL-12 4FDY 0 JRNL AUTH Q.XU,H.J.CHIU,C.L.FARR,L.JAROSZEWSKI,M.W.KNUTH,M.D.MILLER, JRNL AUTH 2 S.A.LESLEY,A.GODZIK,M.A.ELSLIGER,A.M.DEACON,I.A.WILSON JRNL TITL STRUCTURES OF A BIFUNCTIONAL CELL WALL HYDROLASE CWLT JRNL TITL 2 CONTAINING A NOVEL BACTERIAL LYSOZYME AND AN NLPC/P60 JRNL TITL 3 DL-ENDOPEPTIDASE. JRNL REF J.MOL.BIOL. V. 426 169 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 24051416 JRNL DOI 10.1016/J.JMB.2013.09.011 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 33396 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1677 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 17 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.03 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2908 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2261 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2759 REMARK 3 BIN R VALUE (WORKING SET) : 0.2262 REMARK 3 BIN FREE R VALUE : 0.2249 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.12 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 149 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4648 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 201 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.88480 REMARK 3 B22 (A**2) : 2.04880 REMARK 3 B33 (A**2) : 2.83610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 4.57310 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.408 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4798 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6536 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2129 ; 4.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 136 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 705 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4798 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 602 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5793 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.04 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.33 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.47 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|46 - 208} REMARK 3 ORIGIN FOR THE GROUP (A): 22.7202 7.1129 -42.8707 REMARK 3 T TENSOR REMARK 3 T11: -0.1393 T22: -0.0727 REMARK 3 T33: -0.1105 T12: -0.0406 REMARK 3 T13: -0.0536 T23: -0.0569 REMARK 3 L TENSOR REMARK 3 L11: 2.1945 L22: 3.2914 REMARK 3 L33: 3.7439 L12: 0.2208 REMARK 3 L13: 0.9434 L23: 0.8283 REMARK 3 S TENSOR REMARK 3 S11: 0.1141 S12: 0.0535 S13: 0.3006 REMARK 3 S21: 0.2612 S22: 0.0779 S23: -0.2023 REMARK 3 S31: -0.2183 S32: 0.5527 S33: -0.1920 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|209 - 340} REMARK 3 ORIGIN FOR THE GROUP (A): 48.9313 -23.2303 -51.3675 REMARK 3 T TENSOR REMARK 3 T11: 0.1048 T22: -0.2548 REMARK 3 T33: -0.1012 T12: -0.0354 REMARK 3 T13: -0.1337 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 3.3294 L22: 3.2475 REMARK 3 L33: 3.7462 L12: 0.7779 REMARK 3 L13: 2.4675 L23: 1.2629 REMARK 3 S TENSOR REMARK 3 S11: 0.2298 S12: -0.0040 S13: -0.4034 REMARK 3 S21: 0.5827 S22: 0.0240 S23: -0.3430 REMARK 3 S31: 0.5958 S32: -0.0331 S33: -0.2538 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {B|46 - 208} REMARK 3 ORIGIN FOR THE GROUP (A): 43.8800 35.1864 -19.7324 REMARK 3 T TENSOR REMARK 3 T11: -0.1200 T22: -0.0684 REMARK 3 T33: -0.1750 T12: 0.0828 REMARK 3 T13: -0.0888 T23: 0.0321 REMARK 3 L TENSOR REMARK 3 L11: 2.0889 L22: 3.4176 REMARK 3 L33: 5.0430 L12: 0.5977 REMARK 3 L13: 2.5352 L23: 0.6796 REMARK 3 S TENSOR REMARK 3 S11: -0.1845 S12: -0.1235 S13: 0.2316 REMARK 3 S21: -0.4447 S22: 0.0099 S23: 0.5011 REMARK 3 S31: -0.5418 S32: -0.5599 S33: 0.1746 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {B|209 - 340} REMARK 3 ORIGIN FOR THE GROUP (A): 19.1731 5.4271 -10.3206 REMARK 3 T TENSOR REMARK 3 T11: 0.1026 T22: -0.1939 REMARK 3 T33: -0.1735 T12: 0.0206 REMARK 3 T13: -0.1062 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 2.3211 L22: 3.8783 REMARK 3 L33: 4.1738 L12: -0.7938 REMARK 3 L13: 1.4977 L23: -2.2064 REMARK 3 S TENSOR REMARK 3 S11: 0.1142 S12: 0.1590 S13: -0.1180 REMARK 3 S21: -0.5590 S22: 0.0011 S23: 0.1143 REMARK 3 S31: 0.5726 S32: 0.0523 S33: -0.1154 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR REMARK 3 RESTRAINT REPRESENTATION (-AUTONCS). 5. THE DENSITY FOR THE N- REMARK 3 TERMINUS OF B CHAIN (46-71) IS POOR, THE MODEL FOR THIS REGION REMARK 3 IS BASED ON A CHAIN. REMARK 4 REMARK 4 4FDY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072780. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97895,0.91837,0.97853 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE DECEMBER 29, 2011 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33428 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 47.035 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.71900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CALCIUM ACETATE, 20.0% REMARK 280 POLYETHYLENE GLYCOL 8000, 0.1M MES PH 6.0, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.99700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASP A 29 REMARK 465 ASP A 30 REMARK 465 THR A 31 REMARK 465 ASP A 32 REMARK 465 SER A 33 REMARK 465 GLY A 34 REMARK 465 GLU A 35 REMARK 465 ASN A 36 REMARK 465 ASN A 37 REMARK 465 LYS A 38 REMARK 465 ASP A 39 REMARK 465 SER A 40 REMARK 465 SER A 41 REMARK 465 ILE A 42 REMARK 465 PRO A 43 REMARK 465 GLN A 44 REMARK 465 GLY A 45 REMARK 465 GLY B 0 REMARK 465 ASP B 29 REMARK 465 ASP B 30 REMARK 465 THR B 31 REMARK 465 ASP B 32 REMARK 465 SER B 33 REMARK 465 GLY B 34 REMARK 465 GLU B 35 REMARK 465 ASN B 36 REMARK 465 ASN B 37 REMARK 465 LYS B 38 REMARK 465 ASP B 39 REMARK 465 SER B 40 REMARK 465 SER B 41 REMARK 465 ILE B 42 REMARK 465 PRO B 43 REMARK 465 GLN B 44 REMARK 465 GLY B 45 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 325 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 70 CG CD OE1 OE2 REMARK 470 VAL B 73 CG1 CG2 REMARK 470 GLU B 306 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 84 -23.94 -144.12 REMARK 500 ALA A 238 26.79 -143.33 REMARK 500 SER A 243 -162.29 77.78 REMARK 500 HIS A 289 -67.46 -102.29 REMARK 500 SER A 290 50.37 -101.98 REMARK 500 LEU A 305 -74.48 -111.05 REMARK 500 SER B 84 -32.42 -150.42 REMARK 500 ALA B 238 27.00 -143.97 REMARK 500 SER B 243 -162.07 72.48 REMARK 500 SER B 290 41.48 38.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417449 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (29-340) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4FDY A 29 340 UNP Q932I6 Q932I6_STAAM 29 340 DBREF 4FDY B 29 340 UNP Q932I6 Q932I6_STAAM 29 340 SEQADV 4FDY GLY A 0 UNP Q932I6 EXPRESSION TAG SEQADV 4FDY GLY B 0 UNP Q932I6 EXPRESSION TAG SEQRES 1 A 313 GLY ASP ASP THR ASP SER GLY GLU ASN ASN LYS ASP SER SEQRES 2 A 313 SER ILE PRO GLN GLY GLY VAL THR VAL SER PRO GLU VAL SEQRES 3 A 313 LEU ALA HIS ARG PRO LEU ILE GLU LYS TYR GLY LYS GLU SEQRES 4 A 313 TYR GLY ILE GLU ASP TYR VAL SER TYR ILE LEU ALA ILE SEQRES 5 A 313 MSE GLN VAL GLU SER GLY GLY THR ALA GLU ASP VAL MSE SEQRES 6 A 313 GLN SER SER GLU SER LEU GLY LEU PRO PRO ASN SER LEU SEQRES 7 A 313 SER THR GLU GLU SER ILE LYS GLN GLY VAL LYS TYR PHE SEQRES 8 A 313 SER GLU LEU LEU THR SER ALA GLU GLN GLN GLY VAL ASP SEQRES 9 A 313 ILE ASP SER VAL ILE GLN SER TYR ASN TYR GLY GLY GLY SEQRES 10 A 313 PHE LEU ASN TYR VAL ARG SER HIS GLY LYS LYS TYR THR SEQRES 11 A 313 TYR GLU LEU ALA GLU GLN PHE SER LYS GLU LYS SER GLY SEQRES 12 A 313 GLY GLN LYS ALA ASP TYR PRO ASN PRO ILE ALA ILE PRO SEQRES 13 A 313 VAL ASN GLY GLY TRP ARG TYR ASN TYR GLY ASN GLN PHE SEQRES 14 A 313 TYR VAL GLN LEU VAL SER GLN TYR LEU THR ASP THR SER SEQRES 15 A 313 PRO THR GLU PHE ASP ASP GLU THR VAL GLN VAL ILE MSE SEQRES 16 A 313 ASP GLU ALA LEU LYS TYR GLU GLY PHE PRO TYR VAL PHE SEQRES 17 A 313 GLY GLY ALA SER PRO THR THR SER PHE ASP OCS SER GLY SEQRES 18 A 313 LEU ILE GLN TRP VAL TYR ASP LYS ALA GLY ILE SER LEU SEQRES 19 A 313 PRO ARG VAL ALA GLN ASP GLN TYR ASP ALA THR GLN GLU SEQRES 20 A 313 ILE SER MSE GLU GLU ALA GLN ALA GLY ASP LEU ILE PHE SEQRES 21 A 313 PHE HIS SER THR TYR ASN ALA GLY THR TYR VAL THR HIS SEQRES 22 A 313 VAL ALA ILE TYR LEU GLU GLY ASN ARG PHE TYR HIS ALA SEQRES 23 A 313 GLY ASP PRO ILE GLY TYR GLY ASP LEU SER SER ARG TYR SEQRES 24 A 313 TRP GLN ASP HIS LEU ILE GLY ALA ARG ARG VAL ILE HIS SEQRES 25 A 313 ASN SEQRES 1 B 313 GLY ASP ASP THR ASP SER GLY GLU ASN ASN LYS ASP SER SEQRES 2 B 313 SER ILE PRO GLN GLY GLY VAL THR VAL SER PRO GLU VAL SEQRES 3 B 313 LEU ALA HIS ARG PRO LEU ILE GLU LYS TYR GLY LYS GLU SEQRES 4 B 313 TYR GLY ILE GLU ASP TYR VAL SER TYR ILE LEU ALA ILE SEQRES 5 B 313 MSE GLN VAL GLU SER GLY GLY THR ALA GLU ASP VAL MSE SEQRES 6 B 313 GLN SER SER GLU SER LEU GLY LEU PRO PRO ASN SER LEU SEQRES 7 B 313 SER THR GLU GLU SER ILE LYS GLN GLY VAL LYS TYR PHE SEQRES 8 B 313 SER GLU LEU LEU THR SER ALA GLU GLN GLN GLY VAL ASP SEQRES 9 B 313 ILE ASP SER VAL ILE GLN SER TYR ASN TYR GLY GLY GLY SEQRES 10 B 313 PHE LEU ASN TYR VAL ARG SER HIS GLY LYS LYS TYR THR SEQRES 11 B 313 TYR GLU LEU ALA GLU GLN PHE SER LYS GLU LYS SER GLY SEQRES 12 B 313 GLY GLN LYS ALA ASP TYR PRO ASN PRO ILE ALA ILE PRO SEQRES 13 B 313 VAL ASN GLY GLY TRP ARG TYR ASN TYR GLY ASN GLN PHE SEQRES 14 B 313 TYR VAL GLN LEU VAL SER GLN TYR LEU THR ASP THR SER SEQRES 15 B 313 PRO THR GLU PHE ASP ASP GLU THR VAL GLN VAL ILE MSE SEQRES 16 B 313 ASP GLU ALA LEU LYS TYR GLU GLY PHE PRO TYR VAL PHE SEQRES 17 B 313 GLY GLY ALA SER PRO THR THR SER PHE ASP OCS SER GLY SEQRES 18 B 313 LEU ILE GLN TRP VAL TYR ASP LYS ALA GLY ILE SER LEU SEQRES 19 B 313 PRO ARG VAL ALA GLN ASP GLN TYR ASP ALA THR GLN GLU SEQRES 20 B 313 ILE SER MSE GLU GLU ALA GLN ALA GLY ASP LEU ILE PHE SEQRES 21 B 313 PHE HIS SER THR TYR ASN ALA GLY THR TYR VAL THR HIS SEQRES 22 B 313 VAL ALA ILE TYR LEU GLU GLY ASN ARG PHE TYR HIS ALA SEQRES 23 B 313 GLY ASP PRO ILE GLY TYR GLY ASP LEU SER SER ARG TYR SEQRES 24 B 313 TRP GLN ASP HIS LEU ILE GLY ALA ARG ARG VAL ILE HIS SEQRES 25 B 313 ASN MODRES 4FDY MSE A 80 MET SELENOMETHIONINE MODRES 4FDY MSE A 92 MET SELENOMETHIONINE MODRES 4FDY MSE A 222 MET SELENOMETHIONINE MODRES 4FDY OCS A 246 CYS CYSTEINESULFONIC ACID MODRES 4FDY MSE A 277 MET SELENOMETHIONINE MODRES 4FDY MSE B 80 MET SELENOMETHIONINE MODRES 4FDY MSE B 92 MET SELENOMETHIONINE MODRES 4FDY MSE B 222 MET SELENOMETHIONINE MODRES 4FDY OCS B 246 CYS CYSTEINESULFONIC ACID MODRES 4FDY MSE B 277 MET SELENOMETHIONINE HET MSE A 80 8 HET MSE A 92 8 HET MSE A 222 8 HET OCS A 246 9 HET MSE A 277 8 HET MSE B 80 8 HET MSE B 92 8 HET MSE B 222 8 HET OCS B 246 9 HET MSE B 277 8 HETNAM MSE SELENOMETHIONINE HETNAM OCS CYSTEINESULFONIC ACID FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 1 OCS 2(C3 H7 N O5 S) FORMUL 3 HOH *201(H2 O) HELIX 1 1 SER A 50 ALA A 55 1 6 HELIX 2 2 HIS A 56 TYR A 67 1 12 HELIX 3 3 ILE A 69 ASP A 71 5 3 HELIX 4 4 TYR A 72 SER A 84 1 13 HELIX 5 5 SER A 95 GLY A 99 5 5 HELIX 6 6 SER A 106 GLY A 129 1 24 HELIX 7 7 ASP A 131 GLY A 142 1 12 HELIX 8 8 GLY A 143 SER A 151 1 9 HELIX 9 9 THR A 157 SER A 169 1 13 HELIX 10 10 ALA A 181 GLY A 186 1 6 HELIX 11 11 PHE A 196 GLN A 203 1 8 HELIX 12 12 ASP A 214 LEU A 226 1 13 HELIX 13 13 LYS A 227 GLU A 229 5 3 HELIX 14 14 ASP A 245 ALA A 257 1 13 HELIX 15 15 VAL A 264 THR A 272 1 9 HELIX 16 16 SER A 324 HIS A 330 1 7 HELIX 17 17 SER B 50 ALA B 55 1 6 HELIX 18 18 HIS B 56 TYR B 67 1 12 HELIX 19 19 ILE B 69 ASP B 71 5 3 HELIX 20 20 TYR B 72 SER B 84 1 13 HELIX 21 21 SER B 95 GLY B 99 5 5 HELIX 22 22 SER B 106 GLY B 129 1 24 HELIX 23 23 ASP B 131 GLY B 142 1 12 HELIX 24 24 GLY B 143 SER B 151 1 9 HELIX 25 25 THR B 157 SER B 169 1 13 HELIX 26 26 ALA B 181 GLY B 186 1 6 HELIX 27 27 PHE B 196 GLN B 203 1 8 HELIX 28 28 ASP B 214 LEU B 226 1 13 HELIX 29 29 LYS B 227 GLU B 229 5 3 HELIX 30 30 ASP B 245 ALA B 257 1 13 HELIX 31 31 VAL B 264 THR B 272 1 9 HELIX 32 32 SER B 324 HIS B 330 1 7 SHEET 1 A 2 LYS A 173 ASP A 175 0 SHEET 2 A 2 TRP A 188 TYR A 190 -1 O ARG A 189 N ALA A 174 SHEET 1 B 2 ALA A 238 SER A 239 0 SHEET 2 B 2 SER A 243 PHE A 244 -1 O SER A 243 N SER A 239 SHEET 1 C 6 GLN A 273 ILE A 275 0 SHEET 2 C 6 LEU A 331 ARG A 336 -1 O ARG A 336 N GLN A 273 SHEET 3 C 6 LEU A 285 PHE A 288 -1 N LEU A 285 O ARG A 335 SHEET 4 C 6 HIS A 300 GLU A 306 -1 O HIS A 300 N PHE A 288 SHEET 5 C 6 ARG A 309 HIS A 312 -1 O TYR A 311 N ILE A 303 SHEET 6 C 6 GLY A 318 ASP A 321 -1 O GLY A 320 N PHE A 310 SHEET 1 D 2 LYS B 173 ASP B 175 0 SHEET 2 D 2 TRP B 188 TYR B 190 -1 O ARG B 189 N ALA B 174 SHEET 1 E 2 ALA B 238 SER B 239 0 SHEET 2 E 2 SER B 243 PHE B 244 -1 O SER B 243 N SER B 239 SHEET 1 F 6 GLN B 273 ILE B 275 0 SHEET 2 F 6 LEU B 331 ARG B 336 -1 O ARG B 336 N GLN B 273 SHEET 3 F 6 LEU B 285 HIS B 289 -1 N LEU B 285 O ARG B 335 SHEET 4 F 6 VAL B 298 GLU B 306 -1 O THR B 299 N PHE B 288 SHEET 5 F 6 ARG B 309 HIS B 312 -1 O TYR B 311 N ILE B 303 SHEET 6 F 6 GLY B 318 ASP B 321 -1 O GLY B 320 N PHE B 310 LINK C ILE A 79 N MSE A 80 1555 1555 1.35 LINK C MSE A 80 N GLN A 81 1555 1555 1.35 LINK C VAL A 91 N MSE A 92 1555 1555 1.34 LINK C MSE A 92 N GLN A 93 1555 1555 1.35 LINK C ILE A 221 N MSE A 222 1555 1555 1.35 LINK C MSE A 222 N ASP A 223 1555 1555 1.35 LINK C ASP A 245 N OCS A 246 1555 1555 1.33 LINK C OCS A 246 N SER A 247 1555 1555 1.35 LINK C SER A 276 N MSE A 277 1555 1555 1.34 LINK C MSE A 277 N GLU A 278 1555 1555 1.35 LINK C ILE B 79 N MSE B 80 1555 1555 1.35 LINK C MSE B 80 N GLN B 81 1555 1555 1.34 LINK C VAL B 91 N MSE B 92 1555 1555 1.35 LINK C MSE B 92 N GLN B 93 1555 1555 1.35 LINK C ILE B 221 N MSE B 222 1555 1555 1.35 LINK C MSE B 222 N ASP B 223 1555 1555 1.36 LINK C ASP B 245 N OCS B 246 1555 1555 1.34 LINK C OCS B 246 N SER B 247 1555 1555 1.35 LINK C SER B 276 N MSE B 277 1555 1555 1.34 LINK C MSE B 277 N GLU B 278 1555 1555 1.36 CISPEP 1 ASP A 315 PRO A 316 0 -2.41 CISPEP 2 ASP B 315 PRO B 316 0 -0.64 CRYST1 40.666 71.994 124.917 90.00 95.91 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024591 0.000000 0.002546 0.00000 SCALE2 0.000000 0.013890 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008048 0.00000