data_4FEJ # _entry.id 4FEJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4FEJ pdb_00004fej 10.2210/pdb4fej/pdb NDB NA1834 ? ? RCSB RCSB072801 ? ? WWPDB D_1000072801 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-27 2 'Structure model' 1 1 2013-03-27 3 'Structure model' 1 2 2013-05-22 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4FEJ _pdbx_database_status.recvd_initial_deposition_date 2012-05-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1U8D . unspecified PDB 4FE5 . unspecified PDB 4FEL . unspecified PDB 4FEN . unspecified PDB 4FEO . unspecified PDB 4FEP . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stoddard, C.D.' 1 'Trausch, J.J.' 2 'Widmann, J.' 3 'Marcano, J.' 4 'Knight, R.' 5 'Batey, R.T.' 6 # _citation.id primary _citation.title 'Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 425 _citation.page_first 1596 _citation.page_last 1611 _citation.year 2013 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23485418 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2013.02.023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stoddard, C.D.' 1 ? primary 'Widmann, J.' 2 ? primary 'Trausch, J.J.' 3 ? primary 'Marcano-Velazquez, J.G.' 4 ? primary 'Knight, R.' 5 ? primary 'Batey, R.T.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'A24U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain' 21483.744 1 ? ? ? ? 2 non-polymer syn HYPOXANTHINE 136.111 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 4 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 7 ? ? ? ? 5 water nat water 18.015 592 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGACAUAUAUUCGCGUGGAUAUGGCACGCAAGUUUCUACCGGGCACCGUAAAUGUCCGACUAUGUCC _entity_poly.pdbx_seq_one_letter_code_can GGACAUAUAUUCGCGUGGAUAUGGCACGCAAGUUUCUACCGGGCACCGUAAAUGUCCGACUAUGUCC _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 HYPOXANTHINE HPA 3 'ACETATE ION' ACT 4 'COBALT HEXAMMINE(III)' NCO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 C n 1 5 A n 1 6 U n 1 7 A n 1 8 U n 1 9 A n 1 10 U n 1 11 U n 1 12 C n 1 13 G n 1 14 C n 1 15 G n 1 16 U n 1 17 G n 1 18 G n 1 19 A n 1 20 U n 1 21 A n 1 22 U n 1 23 G n 1 24 G n 1 25 C n 1 26 A n 1 27 C n 1 28 G n 1 29 C n 1 30 A n 1 31 A n 1 32 G n 1 33 U n 1 34 U n 1 35 U n 1 36 C n 1 37 U n 1 38 A n 1 39 C n 1 40 C n 1 41 G n 1 42 G n 1 43 G n 1 44 C n 1 45 A n 1 46 C n 1 47 C n 1 48 G n 1 49 U n 1 50 A n 1 51 A n 1 52 A n 1 53 U n 1 54 G n 1 55 U n 1 56 C n 1 57 C n 1 58 G n 1 59 A n 1 60 C n 1 61 U n 1 62 A n 1 63 U n 1 64 G n 1 65 U n 1 66 C n 1 67 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'T7 RNAP transcript' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 HPA non-polymer . HYPOXANTHINE ? 'C5 H4 N4 O' 136.111 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 15 15 G G B . n A 1 2 G 2 16 16 G G B . n A 1 3 A 3 17 17 A A B . n A 1 4 C 4 18 18 C C B . n A 1 5 A 5 19 19 A A B . n A 1 6 U 6 20 20 U U B . n A 1 7 A 7 21 21 A A B . n A 1 8 U 8 22 22 U U B . n A 1 9 A 9 23 23 A A B . n A 1 10 U 10 24 24 U U B . n A 1 11 U 11 25 25 U U B . n A 1 12 C 12 26 26 C C B . n A 1 13 G 13 27 27 G G B . n A 1 14 C 14 28 28 C C B . n A 1 15 G 15 29 29 G G B . n A 1 16 U 16 30 30 U U B . n A 1 17 G 17 31 31 G G B . n A 1 18 G 18 32 32 G G B . n A 1 19 A 19 33 33 A A B . n A 1 20 U 20 34 34 U U B . n A 1 21 A 21 35 35 A A B . n A 1 22 U 22 36 36 U U B . n A 1 23 G 23 37 37 G G B . n A 1 24 G 24 38 38 G G B . n A 1 25 C 25 39 39 C C B . n A 1 26 A 26 40 40 A A B . n A 1 27 C 27 41 41 C C B . n A 1 28 G 28 42 42 G G B . n A 1 29 C 29 43 43 C C B . n A 1 30 A 30 44 44 A A B . n A 1 31 A 31 45 45 A A B . n A 1 32 G 32 46 46 G G B . n A 1 33 U 33 47 47 U U B . n A 1 34 U 34 48 48 U U B . n A 1 35 U 35 49 49 U U B . n A 1 36 C 36 50 50 C C B . n A 1 37 U 37 51 51 U U B . n A 1 38 A 38 52 52 A A B . n A 1 39 C 39 53 53 C C B . n A 1 40 C 40 54 54 C C B . n A 1 41 G 41 55 55 G G B . n A 1 42 G 42 56 56 G G B . n A 1 43 G 43 57 57 G G B . n A 1 44 C 44 58 58 C C B . n A 1 45 A 45 59 59 A A B . n A 1 46 C 46 60 60 C C B . n A 1 47 C 47 61 61 C C B . n A 1 48 G 48 62 62 G G B . n A 1 49 U 49 63 63 U U B . n A 1 50 A 50 64 64 A A B . n A 1 51 A 51 65 65 A A B . n A 1 52 A 52 66 66 A A B . n A 1 53 U 53 67 67 U U B . n A 1 54 G 54 68 68 G G B . n A 1 55 U 55 69 69 U U B . n A 1 56 C 56 70 70 C C B . n A 1 57 C 57 71 71 C C B . n A 1 58 G 58 72 72 G G B . n A 1 59 A 59 73 73 A A B . n A 1 60 C 60 74 74 C C B . n A 1 61 U 61 75 75 U U B . n A 1 62 A 62 76 76 A A B . n A 1 63 U 63 77 77 U U B . n A 1 64 G 64 78 78 G G B . n A 1 65 U 65 79 79 U U B . n A 1 66 C 66 80 80 C C B . n A 1 67 C 67 81 81 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HPA 1 101 90 HPA HPA B . C 3 ACT 1 102 96 ACT ACT B . D 3 ACT 1 103 97 ACT ACT B . E 4 NCO 1 104 101 NCO NCO B . F 4 NCO 1 105 104 NCO NCO B . G 4 NCO 1 106 102 NCO NCO B . H 4 NCO 1 107 105 NCO NCO B . I 4 NCO 1 108 103 NCO NCO B . J 4 NCO 1 109 108 NCO NCO B . K 4 NCO 1 110 112 NCO NCO B . L 5 HOH 1 201 300 HOH HOH B . L 5 HOH 2 202 301 HOH HOH B . L 5 HOH 3 203 302 HOH HOH B . L 5 HOH 4 204 303 HOH HOH B . L 5 HOH 5 205 304 HOH HOH B . L 5 HOH 6 206 305 HOH HOH B . L 5 HOH 7 207 306 HOH HOH B . L 5 HOH 8 208 307 HOH HOH B . L 5 HOH 9 209 308 HOH HOH B . L 5 HOH 10 210 309 HOH HOH B . L 5 HOH 11 211 310 HOH HOH B . L 5 HOH 12 212 311 HOH HOH B . L 5 HOH 13 213 312 HOH HOH B . L 5 HOH 14 214 313 HOH HOH B . L 5 HOH 15 215 314 HOH HOH B . L 5 HOH 16 216 315 HOH HOH B . L 5 HOH 17 217 316 HOH HOH B . L 5 HOH 18 218 317 HOH HOH B . L 5 HOH 19 219 318 HOH HOH B . L 5 HOH 20 220 319 HOH HOH B . L 5 HOH 21 221 320 HOH HOH B . L 5 HOH 22 222 321 HOH HOH B . L 5 HOH 23 223 322 HOH HOH B . L 5 HOH 24 224 323 HOH HOH B . L 5 HOH 25 225 324 HOH HOH B . L 5 HOH 26 226 325 HOH HOH B . L 5 HOH 27 227 326 HOH HOH B . L 5 HOH 28 228 327 HOH HOH B . L 5 HOH 29 229 328 HOH HOH B . L 5 HOH 30 230 329 HOH HOH B . L 5 HOH 31 231 330 HOH HOH B . L 5 HOH 32 232 331 HOH HOH B . L 5 HOH 33 233 332 HOH HOH B . L 5 HOH 34 234 333 HOH HOH B . L 5 HOH 35 235 334 HOH HOH B . L 5 HOH 36 236 335 HOH HOH B . L 5 HOH 37 237 336 HOH HOH B . L 5 HOH 38 238 337 HOH HOH B . L 5 HOH 39 239 338 HOH HOH B . L 5 HOH 40 240 339 HOH HOH B . L 5 HOH 41 241 340 HOH HOH B . L 5 HOH 42 242 341 HOH HOH B . L 5 HOH 43 243 342 HOH HOH B . L 5 HOH 44 244 343 HOH HOH B . L 5 HOH 45 245 344 HOH HOH B . L 5 HOH 46 246 345 HOH HOH B . L 5 HOH 47 247 346 HOH HOH B . L 5 HOH 48 248 347 HOH HOH B . L 5 HOH 49 249 348 HOH HOH B . L 5 HOH 50 250 349 HOH HOH B . L 5 HOH 51 251 350 HOH HOH B . L 5 HOH 52 252 351 HOH HOH B . L 5 HOH 53 253 352 HOH HOH B . L 5 HOH 54 254 353 HOH HOH B . L 5 HOH 55 255 354 HOH HOH B . L 5 HOH 56 256 355 HOH HOH B . L 5 HOH 57 257 356 HOH HOH B . L 5 HOH 58 258 357 HOH HOH B . L 5 HOH 59 259 358 HOH HOH B . L 5 HOH 60 260 359 HOH HOH B . L 5 HOH 61 261 360 HOH HOH B . L 5 HOH 62 262 361 HOH HOH B . L 5 HOH 63 263 362 HOH HOH B . L 5 HOH 64 264 363 HOH HOH B . L 5 HOH 65 265 364 HOH HOH B . L 5 HOH 66 266 365 HOH HOH B . L 5 HOH 67 267 366 HOH HOH B . L 5 HOH 68 268 367 HOH HOH B . L 5 HOH 69 269 368 HOH HOH B . L 5 HOH 70 270 369 HOH HOH B . L 5 HOH 71 271 370 HOH HOH B . L 5 HOH 72 272 371 HOH HOH B . L 5 HOH 73 273 372 HOH HOH B . L 5 HOH 74 274 373 HOH HOH B . L 5 HOH 75 275 374 HOH HOH B . L 5 HOH 76 276 375 HOH HOH B . L 5 HOH 77 277 376 HOH HOH B . L 5 HOH 78 278 377 HOH HOH B . L 5 HOH 79 279 378 HOH HOH B . L 5 HOH 80 280 379 HOH HOH B . L 5 HOH 81 281 380 HOH HOH B . L 5 HOH 82 282 381 HOH HOH B . L 5 HOH 83 283 382 HOH HOH B . L 5 HOH 84 284 383 HOH HOH B . L 5 HOH 85 285 384 HOH HOH B . L 5 HOH 86 286 385 HOH HOH B . L 5 HOH 87 287 386 HOH HOH B . L 5 HOH 88 288 387 HOH HOH B . L 5 HOH 89 289 388 HOH HOH B . L 5 HOH 90 290 389 HOH HOH B . L 5 HOH 91 291 390 HOH HOH B . L 5 HOH 92 292 391 HOH HOH B . L 5 HOH 93 293 392 HOH HOH B . L 5 HOH 94 294 393 HOH HOH B . L 5 HOH 95 295 394 HOH HOH B . L 5 HOH 96 296 395 HOH HOH B . L 5 HOH 97 297 396 HOH HOH B . L 5 HOH 98 298 397 HOH HOH B . L 5 HOH 99 299 398 HOH HOH B . L 5 HOH 100 300 399 HOH HOH B . L 5 HOH 101 301 400 HOH HOH B . L 5 HOH 102 302 401 HOH HOH B . L 5 HOH 103 303 402 HOH HOH B . L 5 HOH 104 304 403 HOH HOH B . L 5 HOH 105 305 404 HOH HOH B . L 5 HOH 106 306 405 HOH HOH B . L 5 HOH 107 307 406 HOH HOH B . L 5 HOH 108 308 407 HOH HOH B . L 5 HOH 109 309 408 HOH HOH B . L 5 HOH 110 310 409 HOH HOH B . L 5 HOH 111 311 410 HOH HOH B . L 5 HOH 112 312 411 HOH HOH B . L 5 HOH 113 313 412 HOH HOH B . L 5 HOH 114 314 413 HOH HOH B . L 5 HOH 115 315 414 HOH HOH B . L 5 HOH 116 316 415 HOH HOH B . L 5 HOH 117 317 416 HOH HOH B . L 5 HOH 118 318 417 HOH HOH B . L 5 HOH 119 319 418 HOH HOH B . L 5 HOH 120 320 419 HOH HOH B . L 5 HOH 121 321 420 HOH HOH B . L 5 HOH 122 322 421 HOH HOH B . L 5 HOH 123 323 422 HOH HOH B . L 5 HOH 124 324 423 HOH HOH B . L 5 HOH 125 325 424 HOH HOH B . L 5 HOH 126 326 425 HOH HOH B . L 5 HOH 127 327 426 HOH HOH B . L 5 HOH 128 328 427 HOH HOH B . L 5 HOH 129 329 428 HOH HOH B . L 5 HOH 130 330 429 HOH HOH B . L 5 HOH 131 331 430 HOH HOH B . L 5 HOH 132 332 431 HOH HOH B . L 5 HOH 133 333 432 HOH HOH B . L 5 HOH 134 334 433 HOH HOH B . L 5 HOH 135 335 434 HOH HOH B . L 5 HOH 136 336 435 HOH HOH B . L 5 HOH 137 337 436 HOH HOH B . L 5 HOH 138 338 437 HOH HOH B . L 5 HOH 139 339 438 HOH HOH B . L 5 HOH 140 340 439 HOH HOH B . L 5 HOH 141 341 440 HOH HOH B . L 5 HOH 142 342 441 HOH HOH B . L 5 HOH 143 343 442 HOH HOH B . L 5 HOH 144 344 443 HOH HOH B . L 5 HOH 145 345 444 HOH HOH B . L 5 HOH 146 346 445 HOH HOH B . L 5 HOH 147 347 446 HOH HOH B . L 5 HOH 148 348 447 HOH HOH B . L 5 HOH 149 349 448 HOH HOH B . L 5 HOH 150 350 449 HOH HOH B . L 5 HOH 151 351 450 HOH HOH B . L 5 HOH 152 352 451 HOH HOH B . L 5 HOH 153 353 452 HOH HOH B . L 5 HOH 154 354 453 HOH HOH B . L 5 HOH 155 355 454 HOH HOH B . L 5 HOH 156 356 455 HOH HOH B . L 5 HOH 157 357 456 HOH HOH B . L 5 HOH 158 358 457 HOH HOH B . L 5 HOH 159 359 458 HOH HOH B . L 5 HOH 160 360 459 HOH HOH B . L 5 HOH 161 361 460 HOH HOH B . L 5 HOH 162 362 461 HOH HOH B . L 5 HOH 163 363 462 HOH HOH B . L 5 HOH 164 364 463 HOH HOH B . L 5 HOH 165 365 464 HOH HOH B . L 5 HOH 166 366 465 HOH HOH B . L 5 HOH 167 367 466 HOH HOH B . L 5 HOH 168 368 467 HOH HOH B . L 5 HOH 169 369 468 HOH HOH B . L 5 HOH 170 370 469 HOH HOH B . L 5 HOH 171 371 470 HOH HOH B . L 5 HOH 172 372 471 HOH HOH B . L 5 HOH 173 373 472 HOH HOH B . L 5 HOH 174 374 473 HOH HOH B . L 5 HOH 175 375 474 HOH HOH B . L 5 HOH 176 376 475 HOH HOH B . L 5 HOH 177 377 476 HOH HOH B . L 5 HOH 178 378 477 HOH HOH B . L 5 HOH 179 379 478 HOH HOH B . L 5 HOH 180 380 479 HOH HOH B . L 5 HOH 181 381 480 HOH HOH B . L 5 HOH 182 382 481 HOH HOH B . L 5 HOH 183 383 482 HOH HOH B . L 5 HOH 184 384 483 HOH HOH B . L 5 HOH 185 385 484 HOH HOH B . L 5 HOH 186 386 485 HOH HOH B . L 5 HOH 187 387 486 HOH HOH B . L 5 HOH 188 388 487 HOH HOH B . L 5 HOH 189 389 488 HOH HOH B . L 5 HOH 190 390 489 HOH HOH B . L 5 HOH 191 391 490 HOH HOH B . L 5 HOH 192 392 491 HOH HOH B . L 5 HOH 193 393 492 HOH HOH B . L 5 HOH 194 394 493 HOH HOH B . L 5 HOH 195 395 494 HOH HOH B . L 5 HOH 196 396 495 HOH HOH B . L 5 HOH 197 397 496 HOH HOH B . L 5 HOH 198 398 497 HOH HOH B . L 5 HOH 199 399 498 HOH HOH B . L 5 HOH 200 400 499 HOH HOH B . L 5 HOH 201 401 500 HOH HOH B . L 5 HOH 202 402 501 HOH HOH B . L 5 HOH 203 403 502 HOH HOH B . L 5 HOH 204 404 503 HOH HOH B . L 5 HOH 205 405 504 HOH HOH B . L 5 HOH 206 406 505 HOH HOH B . L 5 HOH 207 407 506 HOH HOH B . L 5 HOH 208 408 507 HOH HOH B . L 5 HOH 209 409 508 HOH HOH B . L 5 HOH 210 410 509 HOH HOH B . L 5 HOH 211 411 510 HOH HOH B . L 5 HOH 212 412 511 HOH HOH B . L 5 HOH 213 413 512 HOH HOH B . L 5 HOH 214 414 513 HOH HOH B . L 5 HOH 215 415 514 HOH HOH B . L 5 HOH 216 416 515 HOH HOH B . L 5 HOH 217 417 516 HOH HOH B . L 5 HOH 218 418 517 HOH HOH B . L 5 HOH 219 419 518 HOH HOH B . L 5 HOH 220 420 519 HOH HOH B . L 5 HOH 221 421 520 HOH HOH B . L 5 HOH 222 422 521 HOH HOH B . L 5 HOH 223 423 522 HOH HOH B . L 5 HOH 224 424 523 HOH HOH B . L 5 HOH 225 425 524 HOH HOH B . L 5 HOH 226 426 525 HOH HOH B . L 5 HOH 227 427 526 HOH HOH B . L 5 HOH 228 428 527 HOH HOH B . L 5 HOH 229 429 528 HOH HOH B . L 5 HOH 230 430 529 HOH HOH B . L 5 HOH 231 431 530 HOH HOH B . L 5 HOH 232 432 531 HOH HOH B . L 5 HOH 233 433 532 HOH HOH B . L 5 HOH 234 434 533 HOH HOH B . L 5 HOH 235 435 534 HOH HOH B . L 5 HOH 236 436 535 HOH HOH B . L 5 HOH 237 437 536 HOH HOH B . L 5 HOH 238 438 537 HOH HOH B . L 5 HOH 239 439 538 HOH HOH B . L 5 HOH 240 440 539 HOH HOH B . L 5 HOH 241 441 540 HOH HOH B . L 5 HOH 242 442 541 HOH HOH B . L 5 HOH 243 443 542 HOH HOH B . L 5 HOH 244 444 543 HOH HOH B . L 5 HOH 245 445 544 HOH HOH B . L 5 HOH 246 446 545 HOH HOH B . L 5 HOH 247 447 546 HOH HOH B . L 5 HOH 248 448 547 HOH HOH B . L 5 HOH 249 449 548 HOH HOH B . L 5 HOH 250 450 549 HOH HOH B . L 5 HOH 251 451 550 HOH HOH B . L 5 HOH 252 452 551 HOH HOH B . L 5 HOH 253 453 552 HOH HOH B . L 5 HOH 254 454 553 HOH HOH B . L 5 HOH 255 455 554 HOH HOH B . L 5 HOH 256 456 555 HOH HOH B . L 5 HOH 257 457 556 HOH HOH B . L 5 HOH 258 458 557 HOH HOH B . L 5 HOH 259 459 558 HOH HOH B . L 5 HOH 260 460 559 HOH HOH B . L 5 HOH 261 461 560 HOH HOH B . L 5 HOH 262 462 561 HOH HOH B . L 5 HOH 263 463 562 HOH HOH B . L 5 HOH 264 464 563 HOH HOH B . L 5 HOH 265 465 564 HOH HOH B . L 5 HOH 266 466 565 HOH HOH B . L 5 HOH 267 467 566 HOH HOH B . L 5 HOH 268 468 567 HOH HOH B . L 5 HOH 269 469 568 HOH HOH B . L 5 HOH 270 470 569 HOH HOH B . L 5 HOH 271 471 570 HOH HOH B . L 5 HOH 272 472 571 HOH HOH B . L 5 HOH 273 473 572 HOH HOH B . L 5 HOH 274 474 573 HOH HOH B . L 5 HOH 275 475 574 HOH HOH B . L 5 HOH 276 476 575 HOH HOH B . L 5 HOH 277 477 576 HOH HOH B . L 5 HOH 278 478 577 HOH HOH B . L 5 HOH 279 479 578 HOH HOH B . L 5 HOH 280 480 579 HOH HOH B . L 5 HOH 281 481 580 HOH HOH B . L 5 HOH 282 482 581 HOH HOH B . L 5 HOH 283 483 582 HOH HOH B . L 5 HOH 284 484 583 HOH HOH B . L 5 HOH 285 485 584 HOH HOH B . L 5 HOH 286 486 585 HOH HOH B . L 5 HOH 287 487 586 HOH HOH B . L 5 HOH 288 488 587 HOH HOH B . L 5 HOH 289 489 588 HOH HOH B . L 5 HOH 290 490 589 HOH HOH B . L 5 HOH 291 491 590 HOH HOH B . L 5 HOH 292 492 591 HOH HOH B . L 5 HOH 293 493 592 HOH HOH B . L 5 HOH 294 494 593 HOH HOH B . L 5 HOH 295 495 594 HOH HOH B . L 5 HOH 296 496 595 HOH HOH B . L 5 HOH 297 497 596 HOH HOH B . L 5 HOH 298 498 597 HOH HOH B . L 5 HOH 299 499 598 HOH HOH B . L 5 HOH 300 500 599 HOH HOH B . L 5 HOH 301 501 600 HOH HOH B . L 5 HOH 302 502 601 HOH HOH B . L 5 HOH 303 503 602 HOH HOH B . L 5 HOH 304 504 603 HOH HOH B . L 5 HOH 305 505 604 HOH HOH B . L 5 HOH 306 506 605 HOH HOH B . L 5 HOH 307 507 606 HOH HOH B . L 5 HOH 308 508 607 HOH HOH B . L 5 HOH 309 509 608 HOH HOH B . L 5 HOH 310 510 609 HOH HOH B . L 5 HOH 311 511 610 HOH HOH B . L 5 HOH 312 512 611 HOH HOH B . L 5 HOH 313 513 612 HOH HOH B . L 5 HOH 314 514 613 HOH HOH B . L 5 HOH 315 515 614 HOH HOH B . L 5 HOH 316 516 615 HOH HOH B . L 5 HOH 317 517 616 HOH HOH B . L 5 HOH 318 518 617 HOH HOH B . L 5 HOH 319 519 618 HOH HOH B . L 5 HOH 320 520 619 HOH HOH B . L 5 HOH 321 521 620 HOH HOH B . L 5 HOH 322 522 621 HOH HOH B . L 5 HOH 323 523 622 HOH HOH B . L 5 HOH 324 524 623 HOH HOH B . L 5 HOH 325 525 624 HOH HOH B . L 5 HOH 326 526 625 HOH HOH B . L 5 HOH 327 527 626 HOH HOH B . L 5 HOH 328 528 627 HOH HOH B . L 5 HOH 329 529 628 HOH HOH B . L 5 HOH 330 530 629 HOH HOH B . L 5 HOH 331 531 630 HOH HOH B . L 5 HOH 332 532 631 HOH HOH B . L 5 HOH 333 533 632 HOH HOH B . L 5 HOH 334 534 633 HOH HOH B . L 5 HOH 335 535 634 HOH HOH B . L 5 HOH 336 536 635 HOH HOH B . L 5 HOH 337 537 636 HOH HOH B . L 5 HOH 338 538 637 HOH HOH B . L 5 HOH 339 539 638 HOH HOH B . L 5 HOH 340 540 639 HOH HOH B . L 5 HOH 341 541 640 HOH HOH B . L 5 HOH 342 542 641 HOH HOH B . L 5 HOH 343 543 642 HOH HOH B . L 5 HOH 344 544 643 HOH HOH B . L 5 HOH 345 545 644 HOH HOH B . L 5 HOH 346 546 645 HOH HOH B . L 5 HOH 347 547 646 HOH HOH B . L 5 HOH 348 548 647 HOH HOH B . L 5 HOH 349 549 648 HOH HOH B . L 5 HOH 350 550 649 HOH HOH B . L 5 HOH 351 551 650 HOH HOH B . L 5 HOH 352 552 651 HOH HOH B . L 5 HOH 353 553 652 HOH HOH B . L 5 HOH 354 554 653 HOH HOH B . L 5 HOH 355 555 654 HOH HOH B . L 5 HOH 356 556 655 HOH HOH B . L 5 HOH 357 557 656 HOH HOH B . L 5 HOH 358 558 657 HOH HOH B . L 5 HOH 359 559 658 HOH HOH B . L 5 HOH 360 560 659 HOH HOH B . L 5 HOH 361 561 660 HOH HOH B . L 5 HOH 362 562 661 HOH HOH B . L 5 HOH 363 563 662 HOH HOH B . L 5 HOH 364 564 663 HOH HOH B . L 5 HOH 365 565 664 HOH HOH B . L 5 HOH 366 566 665 HOH HOH B . L 5 HOH 367 567 666 HOH HOH B . L 5 HOH 368 568 667 HOH HOH B . L 5 HOH 369 569 668 HOH HOH B . L 5 HOH 370 570 669 HOH HOH B . L 5 HOH 371 571 670 HOH HOH B . L 5 HOH 372 572 671 HOH HOH B . L 5 HOH 373 573 672 HOH HOH B . L 5 HOH 374 574 673 HOH HOH B . L 5 HOH 375 575 674 HOH HOH B . L 5 HOH 376 576 675 HOH HOH B . L 5 HOH 377 577 676 HOH HOH B . L 5 HOH 378 578 677 HOH HOH B . L 5 HOH 379 579 678 HOH HOH B . L 5 HOH 380 580 679 HOH HOH B . L 5 HOH 381 581 680 HOH HOH B . L 5 HOH 382 582 681 HOH HOH B . L 5 HOH 383 583 682 HOH HOH B . L 5 HOH 384 584 683 HOH HOH B . L 5 HOH 385 585 684 HOH HOH B . L 5 HOH 386 586 685 HOH HOH B . L 5 HOH 387 587 686 HOH HOH B . L 5 HOH 388 588 687 HOH HOH B . L 5 HOH 389 589 688 HOH HOH B . L 5 HOH 390 590 689 HOH HOH B . L 5 HOH 391 591 690 HOH HOH B . L 5 HOH 392 592 691 HOH HOH B . L 5 HOH 393 593 692 HOH HOH B . L 5 HOH 394 594 693 HOH HOH B . L 5 HOH 395 595 694 HOH HOH B . L 5 HOH 396 596 695 HOH HOH B . L 5 HOH 397 597 696 HOH HOH B . L 5 HOH 398 598 697 HOH HOH B . L 5 HOH 399 599 698 HOH HOH B . L 5 HOH 400 600 699 HOH HOH B . L 5 HOH 401 601 700 HOH HOH B . L 5 HOH 402 602 701 HOH HOH B . L 5 HOH 403 603 702 HOH HOH B . L 5 HOH 404 604 703 HOH HOH B . L 5 HOH 405 605 704 HOH HOH B . L 5 HOH 406 606 705 HOH HOH B . L 5 HOH 407 607 706 HOH HOH B . L 5 HOH 408 608 707 HOH HOH B . L 5 HOH 409 609 708 HOH HOH B . L 5 HOH 410 610 709 HOH HOH B . L 5 HOH 411 611 710 HOH HOH B . L 5 HOH 412 612 711 HOH HOH B . L 5 HOH 413 613 712 HOH HOH B . L 5 HOH 414 614 713 HOH HOH B . L 5 HOH 415 615 714 HOH HOH B . L 5 HOH 416 616 715 HOH HOH B . L 5 HOH 417 617 716 HOH HOH B . L 5 HOH 418 618 717 HOH HOH B . L 5 HOH 419 619 718 HOH HOH B . L 5 HOH 420 620 719 HOH HOH B . L 5 HOH 421 621 720 HOH HOH B . L 5 HOH 422 622 721 HOH HOH B . L 5 HOH 423 623 722 HOH HOH B . L 5 HOH 424 624 723 HOH HOH B . L 5 HOH 425 625 724 HOH HOH B . L 5 HOH 426 626 725 HOH HOH B . L 5 HOH 427 627 726 HOH HOH B . L 5 HOH 428 628 727 HOH HOH B . L 5 HOH 429 629 728 HOH HOH B . L 5 HOH 430 630 729 HOH HOH B . L 5 HOH 431 631 730 HOH HOH B . L 5 HOH 432 632 731 HOH HOH B . L 5 HOH 433 633 732 HOH HOH B . L 5 HOH 434 634 733 HOH HOH B . L 5 HOH 435 635 734 HOH HOH B . L 5 HOH 436 636 735 HOH HOH B . L 5 HOH 437 637 736 HOH HOH B . L 5 HOH 438 638 737 HOH HOH B . L 5 HOH 439 639 738 HOH HOH B . L 5 HOH 440 640 739 HOH HOH B . L 5 HOH 441 641 740 HOH HOH B . L 5 HOH 442 642 741 HOH HOH B . L 5 HOH 443 643 742 HOH HOH B . L 5 HOH 444 644 743 HOH HOH B . L 5 HOH 445 645 744 HOH HOH B . L 5 HOH 446 646 745 HOH HOH B . L 5 HOH 447 647 746 HOH HOH B . L 5 HOH 448 648 747 HOH HOH B . L 5 HOH 449 649 748 HOH HOH B . L 5 HOH 450 650 749 HOH HOH B . L 5 HOH 451 651 750 HOH HOH B . L 5 HOH 452 652 751 HOH HOH B . L 5 HOH 453 653 752 HOH HOH B . L 5 HOH 454 654 753 HOH HOH B . L 5 HOH 455 655 754 HOH HOH B . L 5 HOH 456 656 755 HOH HOH B . L 5 HOH 457 657 756 HOH HOH B . L 5 HOH 458 658 757 HOH HOH B . L 5 HOH 459 659 758 HOH HOH B . L 5 HOH 460 660 759 HOH HOH B . L 5 HOH 461 661 760 HOH HOH B . L 5 HOH 462 662 761 HOH HOH B . L 5 HOH 463 663 762 HOH HOH B . L 5 HOH 464 664 763 HOH HOH B . L 5 HOH 465 665 764 HOH HOH B . L 5 HOH 466 666 765 HOH HOH B . L 5 HOH 467 667 766 HOH HOH B . L 5 HOH 468 668 767 HOH HOH B . L 5 HOH 469 669 768 HOH HOH B . L 5 HOH 470 670 769 HOH HOH B . L 5 HOH 471 671 770 HOH HOH B . L 5 HOH 472 672 771 HOH HOH B . L 5 HOH 473 673 772 HOH HOH B . L 5 HOH 474 674 773 HOH HOH B . L 5 HOH 475 675 774 HOH HOH B . L 5 HOH 476 676 775 HOH HOH B . L 5 HOH 477 677 776 HOH HOH B . L 5 HOH 478 678 777 HOH HOH B . L 5 HOH 479 679 778 HOH HOH B . L 5 HOH 480 680 779 HOH HOH B . L 5 HOH 481 681 780 HOH HOH B . L 5 HOH 482 682 781 HOH HOH B . L 5 HOH 483 683 782 HOH HOH B . L 5 HOH 484 684 783 HOH HOH B . L 5 HOH 485 685 784 HOH HOH B . L 5 HOH 486 686 785 HOH HOH B . L 5 HOH 487 687 786 HOH HOH B . L 5 HOH 488 688 787 HOH HOH B . L 5 HOH 489 689 788 HOH HOH B . L 5 HOH 490 690 789 HOH HOH B . L 5 HOH 491 691 790 HOH HOH B . L 5 HOH 492 692 791 HOH HOH B . L 5 HOH 493 693 792 HOH HOH B . L 5 HOH 494 694 793 HOH HOH B . L 5 HOH 495 695 794 HOH HOH B . L 5 HOH 496 696 795 HOH HOH B . L 5 HOH 497 697 796 HOH HOH B . L 5 HOH 498 698 797 HOH HOH B . L 5 HOH 499 699 798 HOH HOH B . L 5 HOH 500 700 799 HOH HOH B . L 5 HOH 501 701 800 HOH HOH B . L 5 HOH 502 702 801 HOH HOH B . L 5 HOH 503 703 802 HOH HOH B . L 5 HOH 504 704 803 HOH HOH B . L 5 HOH 505 705 804 HOH HOH B . L 5 HOH 506 706 805 HOH HOH B . L 5 HOH 507 707 806 HOH HOH B . L 5 HOH 508 708 807 HOH HOH B . L 5 HOH 509 709 808 HOH HOH B . L 5 HOH 510 710 809 HOH HOH B . L 5 HOH 511 711 810 HOH HOH B . L 5 HOH 512 712 811 HOH HOH B . L 5 HOH 513 713 812 HOH HOH B . L 5 HOH 514 714 813 HOH HOH B . L 5 HOH 515 715 814 HOH HOH B . L 5 HOH 516 716 815 HOH HOH B . L 5 HOH 517 717 816 HOH HOH B . L 5 HOH 518 718 817 HOH HOH B . L 5 HOH 519 719 818 HOH HOH B . L 5 HOH 520 720 819 HOH HOH B . L 5 HOH 521 721 820 HOH HOH B . L 5 HOH 522 722 821 HOH HOH B . L 5 HOH 523 723 822 HOH HOH B . L 5 HOH 524 724 823 HOH HOH B . L 5 HOH 525 725 824 HOH HOH B . L 5 HOH 526 726 825 HOH HOH B . L 5 HOH 527 727 826 HOH HOH B . L 5 HOH 528 728 827 HOH HOH B . L 5 HOH 529 729 828 HOH HOH B . L 5 HOH 530 730 829 HOH HOH B . L 5 HOH 531 731 830 HOH HOH B . L 5 HOH 532 732 831 HOH HOH B . L 5 HOH 533 733 833 HOH HOH B . L 5 HOH 534 734 834 HOH HOH B . L 5 HOH 535 735 835 HOH HOH B . L 5 HOH 536 736 836 HOH HOH B . L 5 HOH 537 737 837 HOH HOH B . L 5 HOH 538 738 838 HOH HOH B . L 5 HOH 539 739 839 HOH HOH B . L 5 HOH 540 740 840 HOH HOH B . L 5 HOH 541 741 841 HOH HOH B . L 5 HOH 542 742 842 HOH HOH B . L 5 HOH 543 743 843 HOH HOH B . L 5 HOH 544 744 844 HOH HOH B . L 5 HOH 545 745 845 HOH HOH B . L 5 HOH 546 746 846 HOH HOH B . L 5 HOH 547 747 847 HOH HOH B . L 5 HOH 548 748 848 HOH HOH B . L 5 HOH 549 749 849 HOH HOH B . L 5 HOH 550 750 850 HOH HOH B . L 5 HOH 551 751 851 HOH HOH B . L 5 HOH 552 752 852 HOH HOH B . L 5 HOH 553 753 853 HOH HOH B . L 5 HOH 554 754 854 HOH HOH B . L 5 HOH 555 755 855 HOH HOH B . L 5 HOH 556 756 856 HOH HOH B . L 5 HOH 557 757 857 HOH HOH B . L 5 HOH 558 758 858 HOH HOH B . L 5 HOH 559 759 859 HOH HOH B . L 5 HOH 560 760 860 HOH HOH B . L 5 HOH 561 761 861 HOH HOH B . L 5 HOH 562 762 862 HOH HOH B . L 5 HOH 563 763 863 HOH HOH B . L 5 HOH 564 764 864 HOH HOH B . L 5 HOH 565 765 865 HOH HOH B . L 5 HOH 566 766 866 HOH HOH B . L 5 HOH 567 767 867 HOH HOH B . L 5 HOH 568 768 868 HOH HOH B . L 5 HOH 569 769 869 HOH HOH B . L 5 HOH 570 770 870 HOH HOH B . L 5 HOH 571 771 871 HOH HOH B . L 5 HOH 572 772 872 HOH HOH B . L 5 HOH 573 773 873 HOH HOH B . L 5 HOH 574 774 874 HOH HOH B . L 5 HOH 575 775 875 HOH HOH B . L 5 HOH 576 776 876 HOH HOH B . L 5 HOH 577 777 877 HOH HOH B . L 5 HOH 578 778 878 HOH HOH B . L 5 HOH 579 779 879 HOH HOH B . L 5 HOH 580 780 880 HOH HOH B . L 5 HOH 581 781 881 HOH HOH B . L 5 HOH 582 782 882 HOH HOH B . L 5 HOH 583 783 883 HOH HOH B . L 5 HOH 584 784 884 HOH HOH B . L 5 HOH 585 785 885 HOH HOH B . L 5 HOH 586 786 886 HOH HOH B . L 5 HOH 587 787 887 HOH HOH B . L 5 HOH 588 788 888 HOH HOH B . L 5 HOH 589 789 889 HOH HOH B . L 5 HOH 590 790 890 HOH HOH B . L 5 HOH 591 791 891 HOH HOH B . L 5 HOH 592 792 892 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 CNS refinement . ? 2 CrystalClear 'data reduction' . ? 3 CrystalClear 'data scaling' . ? 4 CNS phasing . ? 5 # _cell.entry_id 4FEJ _cell.length_a 132.694 _cell.length_b 35.230 _cell.length_c 41.895 _cell.angle_alpha 90.00 _cell.angle_beta 90.60 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4FEJ _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4FEJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_percent_sol 46.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 303 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '25% PEG 3K, 200 mM ammonium acetate, 10 mM cobalt hexammine, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 303K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-06-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 4FEJ _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 1.5 _reflns.number_obs 30956 _reflns.number_all 31350 _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4FEJ _refine.ls_number_reflns_obs 30821 _refine.ls_number_reflns_all 31350 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.5 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.185 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.185 _refine.ls_R_factor_R_free 0.230 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 3091 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4FEJ _refine_analyze.Luzzati_coordinate_error_obs 0.017 _refine_analyze.Luzzati_sigma_a_obs 0.013 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1420 _refine_hist.pdbx_number_atoms_ligand 67 _refine_hist.number_atoms_solvent 592 _refine_hist.number_atoms_total 2079 _refine_hist.d_res_high 1.5 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_angle_deg 1.1 ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d 0.008 ? ? ? ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4FEJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4FEJ _struct.title 'Crystal structure of the A24U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4FEJ _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'three-way junction with distal tertiary interaction, genetic regulatory element, hypoxanthine, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4FEJ _struct_ref.pdbx_db_accession 4FEJ _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4FEJ _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 67 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4FEJ _struct_ref_seq.db_align_beg 15 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 81 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 15 _struct_ref_seq.pdbx_auth_seq_align_end 81 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 67 N4 ? ? B G 15 B C 81 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog2 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 66 N3 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 66 O2 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 66 N4 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 65 N3 ? ? B A 17 B U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 65 O4 ? ? B A 17 B U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 64 N1 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 64 O6 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 64 N2 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 63 N3 ? ? B A 19 B U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 63 O4 ? ? B A 19 B U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 62 N1 ? ? B U 20 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 62 N6 ? ? B U 20 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 61 N3 ? ? B A 21 B U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 61 O4 ? ? B A 21 B U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 38 N1 ? ? B U 22 B A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 38 N6 ? ? B U 22 B A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 9 N1 ? ? ? 1_555 A G 32 N2 ? ? B A 23 B G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog19 hydrog ? ? A A 9 N6 ? ? ? 1_555 A G 32 N3 ? ? B A 23 B G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog20 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 31 N1 ? ? B U 25 B A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 31 N6 ? ? B U 25 B A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 12 N4 ? ? ? 1_555 A A 30 N1 ? ? B C 26 B A 44 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog23 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 29 N3 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 29 O2 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 29 N4 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 28 N1 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 28 O6 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 28 N2 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 27 N3 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 27 O2 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 27 N4 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 26 N1 ? ? B U 30 B A 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 26 N6 ? ? B U 30 B A 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 25 N3 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 25 O2 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 25 N4 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A A 19 N1 ? ? ? 1_555 A A 52 N6 ? ? B A 33 B A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog38 hydrog ? ? A A 19 N6 ? ? ? 1_555 A A 52 N7 ? ? B A 33 B A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog39 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 51 N7 ? ? B U 34 B A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog40 hydrog ? ? A U 20 O2 ? ? ? 1_555 A A 51 N6 ? ? B U 34 B A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog41 hydrog ? ? A A 21 N6 ? ? ? 1_555 A A 50 N1 ? ? B A 35 B A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog42 hydrog ? ? A A 21 N7 ? ? ? 1_555 A A 50 N6 ? ? B A 35 B A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog43 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 47 N3 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 47 O2 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 47 N4 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 46 N3 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 46 O2 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 46 N4 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 24 N2 ? ? ? 1_555 A A 52 N1 ? ? B G 38 B A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog50 hydrog ? ? A G 24 N3 ? ? ? 1_555 A A 52 N6 ? ? B G 38 B A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog51 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 39 N3 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 39 O2 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 39 N4 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A U 33 N3 ? ? ? 1_555 A U 37 O4 ? ? B U 47 B U 51 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog55 hydrog ? ? A U 35 N3 ? ? ? 1_555 A A 62 N3 ? ? B U 49 B A 76 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog56 hydrog ? ? A C 36 N4 ? ? ? 1_555 A U 61 O2 ? ? B C 50 B U 75 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog57 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 58 N1 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 58 O6 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 58 N2 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 41 N1 ? ? ? 1_555 A C 57 N3 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 57 O2 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 41 O6 ? ? ? 1_555 A C 57 N4 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 56 N3 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 56 O2 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 56 N4 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 43 N1 ? ? ? 1_555 A U 55 O2 ? ? B G 57 B U 69 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog67 hydrog ? ? A G 43 O6 ? ? ? 1_555 A U 55 N3 ? ? B G 57 B U 69 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog68 hydrog ? ? A C 44 N3 ? ? ? 1_555 A G 54 N1 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 44 N4 ? ? ? 1_555 A G 54 O6 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 44 O2 ? ? ? 1_555 A G 54 N2 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A A 45 N1 ? ? ? 1_555 A U 53 N3 ? ? B A 59 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A A 45 N6 ? ? ? 1_555 A U 53 O4 ? ? B A 59 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 47 O2 ? ? ? 1_555 A A 51 N6 ? ? B C 61 B A 65 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog74 hydrog ? ? A G 48 N2 ? ? ? 1_555 A U 49 O4 ? ? B G 62 B U 63 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B HPA 101 ? 9 'BINDING SITE FOR RESIDUE HPA B 101' AC2 Software B ACT 102 ? 7 'BINDING SITE FOR RESIDUE ACT B 102' AC3 Software B ACT 103 ? 3 'BINDING SITE FOR RESIDUE ACT B 103' AC4 Software B NCO 104 ? 9 'BINDING SITE FOR RESIDUE NCO B 104' AC5 Software B NCO 105 ? 8 'BINDING SITE FOR RESIDUE NCO B 105' AC6 Software B NCO 106 ? 11 'BINDING SITE FOR RESIDUE NCO B 106' AC7 Software B NCO 107 ? 9 'BINDING SITE FOR RESIDUE NCO B 107' AC8 Software B NCO 108 ? 10 'BINDING SITE FOR RESIDUE NCO B 108' AC9 Software B NCO 109 ? 7 'BINDING SITE FOR RESIDUE NCO B 109' BC1 Software B NCO 110 ? 6 'BINDING SITE FOR RESIDUE NCO B 110' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 A A 7 ? A B 21 . ? 1_555 ? 2 AC1 9 U A 8 ? U B 22 . ? 1_555 ? 3 AC1 9 U A 33 ? U B 47 . ? 1_555 ? 4 AC1 9 U A 37 ? U B 51 . ? 1_555 ? 5 AC1 9 A A 38 ? A B 52 . ? 1_555 ? 6 AC1 9 A A 59 ? A B 73 . ? 1_555 ? 7 AC1 9 C A 60 ? C B 74 . ? 1_555 ? 8 AC1 9 U A 61 ? U B 75 . ? 1_555 ? 9 AC1 9 HOH L . ? HOH B 229 . ? 1_555 ? 10 AC2 7 G A 18 ? G B 32 . ? 1_555 ? 11 AC2 7 A A 19 ? A B 33 . ? 1_555 ? 12 AC2 7 G A 24 ? G B 38 . ? 1_555 ? 13 AC2 7 C A 25 ? C B 39 . ? 1_555 ? 14 AC2 7 A A 52 ? A B 66 . ? 1_555 ? 15 AC2 7 U A 53 ? U B 67 . ? 1_555 ? 16 AC2 7 HOH L . ? HOH B 214 . ? 1_555 ? 17 AC3 3 U A 11 ? U B 25 . ? 1_555 ? 18 AC3 3 C A 12 ? C B 26 . ? 1_555 ? 19 AC3 3 HOH L . ? HOH B 485 . ? 1_555 ? 20 AC4 9 G A 15 ? G B 29 . ? 4_545 ? 21 AC4 9 U A 16 ? U B 30 . ? 4_545 ? 22 AC4 9 A A 52 ? A B 66 . ? 1_555 ? 23 AC4 9 U A 53 ? U B 67 . ? 1_555 ? 24 AC4 9 HOH L . ? HOH B 250 . ? 1_555 ? 25 AC4 9 HOH L . ? HOH B 269 . ? 1_555 ? 26 AC4 9 HOH L . ? HOH B 289 . ? 4_555 ? 27 AC4 9 HOH L . ? HOH B 334 . ? 1_555 ? 28 AC4 9 HOH L . ? HOH B 405 . ? 1_555 ? 29 AC5 8 U A 16 ? U B 30 . ? 1_555 ? 30 AC5 8 G A 17 ? G B 31 . ? 1_555 ? 31 AC5 8 G A 18 ? G B 32 . ? 1_555 ? 32 AC5 8 A A 51 ? A B 65 . ? 1_555 ? 33 AC5 8 A A 52 ? A B 66 . ? 1_555 ? 34 AC5 8 HOH L . ? HOH B 213 . ? 1_555 ? 35 AC5 8 HOH L . ? HOH B 238 . ? 1_555 ? 36 AC5 8 HOH L . ? HOH B 412 . ? 1_555 ? 37 AC6 11 G A 24 ? G B 38 . ? 1_555 ? 38 AC6 11 G A 42 ? G B 56 . ? 1_555 ? 39 AC6 11 G A 43 ? G B 57 . ? 4_556 ? 40 AC6 11 C A 44 ? C B 58 . ? 4_556 ? 41 AC6 11 HOH L . ? HOH B 270 . ? 1_555 ? 42 AC6 11 HOH L . ? HOH B 279 . ? 1_555 ? 43 AC6 11 HOH L . ? HOH B 299 . ? 1_555 ? 44 AC6 11 HOH L . ? HOH B 307 . ? 1_555 ? 45 AC6 11 HOH L . ? HOH B 308 . ? 1_555 ? 46 AC6 11 HOH L . ? HOH B 459 . ? 1_555 ? 47 AC6 11 HOH L . ? HOH B 537 . ? 4_556 ? 48 AC7 9 G A 23 ? G B 37 . ? 1_555 ? 49 AC7 9 G A 24 ? G B 38 . ? 1_555 ? 50 AC7 9 G A 43 ? G B 57 . ? 1_555 ? 51 AC7 9 HOH L . ? HOH B 344 . ? 1_555 ? 52 AC7 9 HOH L . ? HOH B 433 . ? 1_555 ? 53 AC7 9 HOH L . ? HOH B 449 . ? 1_555 ? 54 AC7 9 HOH L . ? HOH B 488 . ? 1_555 ? 55 AC7 9 HOH L . ? HOH B 519 . ? 1_555 ? 56 AC7 9 HOH L . ? HOH B 577 . ? 1_555 ? 57 AC8 10 C A 25 ? C B 39 . ? 1_555 ? 58 AC8 10 G A 41 ? G B 55 . ? 1_555 ? 59 AC8 10 G A 42 ? G B 56 . ? 1_555 ? 60 AC8 10 G A 43 ? G B 57 . ? 1_555 ? 61 AC8 10 G A 54 ? G B 68 . ? 1_555 ? 62 AC8 10 U A 55 ? U B 69 . ? 1_555 ? 63 AC8 10 HOH L . ? HOH B 257 . ? 1_555 ? 64 AC8 10 HOH L . ? HOH B 301 . ? 1_555 ? 65 AC8 10 HOH L . ? HOH B 347 . ? 1_555 ? 66 AC8 10 HOH L . ? HOH B 386 . ? 1_555 ? 67 AC9 7 G A 32 ? G B 46 . ? 1_555 ? 68 AC9 7 U A 33 ? U B 47 . ? 1_555 ? 69 AC9 7 C A 36 ? C B 50 . ? 1_555 ? 70 AC9 7 U A 37 ? U B 51 . ? 1_555 ? 71 AC9 7 HOH L . ? HOH B 460 . ? 1_555 ? 72 AC9 7 HOH L . ? HOH B 476 . ? 1_555 ? 73 AC9 7 HOH L . ? HOH B 761 . ? 1_555 ? 74 BC1 6 U A 22 ? U B 36 . ? 4_546 ? 75 BC1 6 G A 28 ? G B 42 . ? 1_545 ? 76 BC1 6 C A 29 ? C B 43 . ? 1_545 ? 77 BC1 6 G A 58 ? G B 72 . ? 1_555 ? 78 BC1 6 A A 59 ? A B 73 . ? 1_555 ? 79 BC1 6 HOH L . ? HOH B 763 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 701 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 782 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.07 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 615 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 615 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_555 _pdbx_validate_symm_contact.dist 2.01 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 U B 24 ? ? 0.076 'SIDE CHAIN' 2 1 U B 34 ? ? 0.074 'SIDE CHAIN' 3 1 G B 38 ? ? 0.075 'SIDE CHAIN' 4 1 G B 55 ? ? 0.053 'SIDE CHAIN' 5 1 A B 59 ? ? 0.056 'SIDE CHAIN' 6 1 A B 64 ? ? 0.051 'SIDE CHAIN' 7 1 A B 66 ? ? 0.054 'SIDE CHAIN' 8 1 G B 72 ? ? 0.050 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ACT C C N N 38 ACT O O N N 39 ACT OXT O N N 40 ACT CH3 C N N 41 ACT H1 H N N 42 ACT H2 H N N 43 ACT H3 H N N 44 C OP3 O N N 45 C P P N N 46 C OP1 O N N 47 C OP2 O N N 48 C "O5'" O N N 49 C "C5'" C N N 50 C "C4'" C N R 51 C "O4'" O N N 52 C "C3'" C N S 53 C "O3'" O N N 54 C "C2'" C N R 55 C "O2'" O N N 56 C "C1'" C N R 57 C N1 N N N 58 C C2 C N N 59 C O2 O N N 60 C N3 N N N 61 C C4 C N N 62 C N4 N N N 63 C C5 C N N 64 C C6 C N N 65 C HOP3 H N N 66 C HOP2 H N N 67 C "H5'" H N N 68 C "H5''" H N N 69 C "H4'" H N N 70 C "H3'" H N N 71 C "HO3'" H N N 72 C "H2'" H N N 73 C "HO2'" H N N 74 C "H1'" H N N 75 C H41 H N N 76 C H42 H N N 77 C H5 H N N 78 C H6 H N N 79 G OP3 O N N 80 G P P N N 81 G OP1 O N N 82 G OP2 O N N 83 G "O5'" O N N 84 G "C5'" C N N 85 G "C4'" C N R 86 G "O4'" O N N 87 G "C3'" C N S 88 G "O3'" O N N 89 G "C2'" C N R 90 G "O2'" O N N 91 G "C1'" C N R 92 G N9 N Y N 93 G C8 C Y N 94 G N7 N Y N 95 G C5 C Y N 96 G C6 C N N 97 G O6 O N N 98 G N1 N N N 99 G C2 C N N 100 G N2 N N N 101 G N3 N N N 102 G C4 C Y N 103 G HOP3 H N N 104 G HOP2 H N N 105 G "H5'" H N N 106 G "H5''" H N N 107 G "H4'" H N N 108 G "H3'" H N N 109 G "HO3'" H N N 110 G "H2'" H N N 111 G "HO2'" H N N 112 G "H1'" H N N 113 G H8 H N N 114 G H1 H N N 115 G H21 H N N 116 G H22 H N N 117 HOH O O N N 118 HOH H1 H N N 119 HOH H2 H N N 120 HPA N1 N Y N 121 HPA C2 C Y N 122 HPA N3 N Y N 123 HPA C4 C Y N 124 HPA C5 C Y N 125 HPA C6 C Y N 126 HPA O6 O N N 127 HPA N7 N Y N 128 HPA C8 C Y N 129 HPA N9 N Y N 130 HPA HN1 H N N 131 HPA H2 H N N 132 HPA HN7 H N N 133 HPA H8 H N N 134 NCO CO CO N N 135 NCO N1 N N N 136 NCO N2 N N N 137 NCO N3 N N N 138 NCO N4 N N N 139 NCO N5 N N N 140 NCO N6 N N N 141 NCO HN11 H N N 142 NCO HN12 H N N 143 NCO HN13 H N N 144 NCO HN21 H N N 145 NCO HN22 H N N 146 NCO HN23 H N N 147 NCO HN31 H N N 148 NCO HN32 H N N 149 NCO HN33 H N N 150 NCO HN41 H N N 151 NCO HN42 H N N 152 NCO HN43 H N N 153 NCO HN51 H N N 154 NCO HN52 H N N 155 NCO HN53 H N N 156 NCO HN61 H N N 157 NCO HN62 H N N 158 NCO HN63 H N N 159 U OP3 O N N 160 U P P N N 161 U OP1 O N N 162 U OP2 O N N 163 U "O5'" O N N 164 U "C5'" C N N 165 U "C4'" C N R 166 U "O4'" O N N 167 U "C3'" C N S 168 U "O3'" O N N 169 U "C2'" C N R 170 U "O2'" O N N 171 U "C1'" C N R 172 U N1 N N N 173 U C2 C N N 174 U O2 O N N 175 U N3 N N N 176 U C4 C N N 177 U O4 O N N 178 U C5 C N N 179 U C6 C N N 180 U HOP3 H N N 181 U HOP2 H N N 182 U "H5'" H N N 183 U "H5''" H N N 184 U "H4'" H N N 185 U "H3'" H N N 186 U "HO3'" H N N 187 U "H2'" H N N 188 U "HO2'" H N N 189 U "H1'" H N N 190 U H3 H N N 191 U H5 H N N 192 U H6 H N N 193 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ACT C O doub N N 40 ACT C OXT sing N N 41 ACT C CH3 sing N N 42 ACT CH3 H1 sing N N 43 ACT CH3 H2 sing N N 44 ACT CH3 H3 sing N N 45 C OP3 P sing N N 46 C OP3 HOP3 sing N N 47 C P OP1 doub N N 48 C P OP2 sing N N 49 C P "O5'" sing N N 50 C OP2 HOP2 sing N N 51 C "O5'" "C5'" sing N N 52 C "C5'" "C4'" sing N N 53 C "C5'" "H5'" sing N N 54 C "C5'" "H5''" sing N N 55 C "C4'" "O4'" sing N N 56 C "C4'" "C3'" sing N N 57 C "C4'" "H4'" sing N N 58 C "O4'" "C1'" sing N N 59 C "C3'" "O3'" sing N N 60 C "C3'" "C2'" sing N N 61 C "C3'" "H3'" sing N N 62 C "O3'" "HO3'" sing N N 63 C "C2'" "O2'" sing N N 64 C "C2'" "C1'" sing N N 65 C "C2'" "H2'" sing N N 66 C "O2'" "HO2'" sing N N 67 C "C1'" N1 sing N N 68 C "C1'" "H1'" sing N N 69 C N1 C2 sing N N 70 C N1 C6 sing N N 71 C C2 O2 doub N N 72 C C2 N3 sing N N 73 C N3 C4 doub N N 74 C C4 N4 sing N N 75 C C4 C5 sing N N 76 C N4 H41 sing N N 77 C N4 H42 sing N N 78 C C5 C6 doub N N 79 C C5 H5 sing N N 80 C C6 H6 sing N N 81 G OP3 P sing N N 82 G OP3 HOP3 sing N N 83 G P OP1 doub N N 84 G P OP2 sing N N 85 G P "O5'" sing N N 86 G OP2 HOP2 sing N N 87 G "O5'" "C5'" sing N N 88 G "C5'" "C4'" sing N N 89 G "C5'" "H5'" sing N N 90 G "C5'" "H5''" sing N N 91 G "C4'" "O4'" sing N N 92 G "C4'" "C3'" sing N N 93 G "C4'" "H4'" sing N N 94 G "O4'" "C1'" sing N N 95 G "C3'" "O3'" sing N N 96 G "C3'" "C2'" sing N N 97 G "C3'" "H3'" sing N N 98 G "O3'" "HO3'" sing N N 99 G "C2'" "O2'" sing N N 100 G "C2'" "C1'" sing N N 101 G "C2'" "H2'" sing N N 102 G "O2'" "HO2'" sing N N 103 G "C1'" N9 sing N N 104 G "C1'" "H1'" sing N N 105 G N9 C8 sing Y N 106 G N9 C4 sing Y N 107 G C8 N7 doub Y N 108 G C8 H8 sing N N 109 G N7 C5 sing Y N 110 G C5 C6 sing N N 111 G C5 C4 doub Y N 112 G C6 O6 doub N N 113 G C6 N1 sing N N 114 G N1 C2 sing N N 115 G N1 H1 sing N N 116 G C2 N2 sing N N 117 G C2 N3 doub N N 118 G N2 H21 sing N N 119 G N2 H22 sing N N 120 G N3 C4 sing N N 121 HOH O H1 sing N N 122 HOH O H2 sing N N 123 HPA N1 C2 sing Y N 124 HPA N1 C6 sing Y N 125 HPA N1 HN1 sing N N 126 HPA C2 N3 doub Y N 127 HPA C2 H2 sing N N 128 HPA N3 C4 sing Y N 129 HPA C4 C5 doub Y N 130 HPA C4 N9 sing Y N 131 HPA C5 C6 sing Y N 132 HPA C5 N7 sing Y N 133 HPA C6 O6 doub N N 134 HPA N7 C8 sing Y N 135 HPA N7 HN7 sing N N 136 HPA C8 N9 doub Y N 137 HPA C8 H8 sing N N 138 NCO CO N1 sing N N 139 NCO CO N2 sing N N 140 NCO CO N3 sing N N 141 NCO CO N4 sing N N 142 NCO CO N5 sing N N 143 NCO CO N6 sing N N 144 NCO N1 HN11 sing N N 145 NCO N1 HN12 sing N N 146 NCO N1 HN13 sing N N 147 NCO N2 HN21 sing N N 148 NCO N2 HN22 sing N N 149 NCO N2 HN23 sing N N 150 NCO N3 HN31 sing N N 151 NCO N3 HN32 sing N N 152 NCO N3 HN33 sing N N 153 NCO N4 HN41 sing N N 154 NCO N4 HN42 sing N N 155 NCO N4 HN43 sing N N 156 NCO N5 HN51 sing N N 157 NCO N5 HN52 sing N N 158 NCO N5 HN53 sing N N 159 NCO N6 HN61 sing N N 160 NCO N6 HN62 sing N N 161 NCO N6 HN63 sing N N 162 U OP3 P sing N N 163 U OP3 HOP3 sing N N 164 U P OP1 doub N N 165 U P OP2 sing N N 166 U P "O5'" sing N N 167 U OP2 HOP2 sing N N 168 U "O5'" "C5'" sing N N 169 U "C5'" "C4'" sing N N 170 U "C5'" "H5'" sing N N 171 U "C5'" "H5''" sing N N 172 U "C4'" "O4'" sing N N 173 U "C4'" "C3'" sing N N 174 U "C4'" "H4'" sing N N 175 U "O4'" "C1'" sing N N 176 U "C3'" "O3'" sing N N 177 U "C3'" "C2'" sing N N 178 U "C3'" "H3'" sing N N 179 U "O3'" "HO3'" sing N N 180 U "C2'" "O2'" sing N N 181 U "C2'" "C1'" sing N N 182 U "C2'" "H2'" sing N N 183 U "O2'" "HO2'" sing N N 184 U "C1'" N1 sing N N 185 U "C1'" "H1'" sing N N 186 U N1 C2 sing N N 187 U N1 C6 sing N N 188 U C2 O2 doub N N 189 U C2 N3 sing N N 190 U N3 C4 sing N N 191 U N3 H3 sing N N 192 U C4 O4 doub N N 193 U C4 C5 sing N N 194 U C5 C6 doub N N 195 U C5 H5 sing N N 196 U C6 H6 sing N N 197 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4FEJ 'double helix' 4FEJ 'a-form double helix' 4FEJ 'mismatched base pair' 4FEJ 'internal loop' 4FEJ 'triple helix' 4FEJ 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 67 1_555 -1.013 -0.206 -0.846 -13.928 -7.647 -15.064 1 B_G15:C81_B B 15 ? B 81 ? ? 1 1 A G 2 1_555 A C 66 1_555 -0.193 -0.120 -0.139 -2.395 -14.854 3.765 2 B_G16:C80_B B 16 ? B 80 ? 19 1 1 A A 3 1_555 A U 65 1_555 -0.134 -0.172 -0.159 -0.071 -16.889 2.655 3 B_A17:U79_B B 17 ? B 79 ? 20 1 1 A C 4 1_555 A G 64 1_555 -0.101 -0.112 -0.007 5.348 -18.072 1.900 4 B_C18:G78_B B 18 ? B 78 ? 19 1 1 A A 5 1_555 A U 63 1_555 -0.153 0.052 0.116 -4.709 -11.183 9.879 5 B_A19:U77_B B 19 ? B 77 ? 20 1 1 A U 6 1_555 A A 62 1_555 0.146 -0.143 0.119 -8.745 -17.195 5.674 6 B_U20:A76_B B 20 ? B 76 ? 20 1 1 A A 7 1_555 A U 61 1_555 0.028 -0.173 0.073 0.183 -14.776 1.828 7 B_A21:U75_B B 21 ? B 75 ? 20 1 1 A U 37 1_555 A U 33 1_555 -3.530 -0.619 0.827 -31.076 42.828 -72.096 8 B_U51:U47_B B 51 ? B 47 ? ? ? 1 A A 38 1_555 A U 8 1_555 0.090 -0.057 -0.225 -14.424 -1.512 1.545 9 B_A52:U22_B B 52 ? B 22 ? 20 1 1 A C 39 1_555 A G 32 1_555 0.015 -0.022 -0.268 18.672 -1.183 -1.267 10 B_C53:G46_B B 53 ? B 46 ? 19 1 1 A U 11 1_555 A A 31 1_555 -0.098 -0.060 0.301 5.001 -11.091 6.190 11 B_U25:A45_B B 25 ? B 45 ? 20 1 1 A C 12 1_555 A A 30 1_555 -1.783 0.159 -0.128 3.538 -14.065 10.148 12 B_C26:A44_B B 26 ? B 44 ? ? 1 1 A G 13 1_555 A C 29 1_555 -0.181 -0.054 -0.237 -9.142 -9.480 0.609 13 B_G27:C43_B B 27 ? B 43 ? 19 1 1 A C 14 1_555 A G 28 1_555 0.053 -0.091 -0.058 2.759 -4.322 0.558 14 B_C28:G42_B B 28 ? B 42 ? 19 1 1 A G 15 1_555 A C 27 1_555 -0.252 -0.170 0.062 2.111 -14.037 -0.615 15 B_G29:C41_B B 29 ? B 41 ? 19 1 1 A U 16 1_555 A A 26 1_555 -0.064 -0.098 0.054 5.228 -5.632 4.471 16 B_U30:A40_B B 30 ? B 40 ? 20 1 1 A G 17 1_555 A C 25 1_555 -0.212 -0.130 0.014 3.267 -8.069 1.441 17 B_G31:C39_B B 31 ? B 39 ? 19 1 1 A C 40 1_555 A G 58 1_555 0.155 -0.136 0.263 -10.735 -13.497 0.887 18 B_C54:G72_B B 54 ? B 72 ? 19 1 1 A G 41 1_555 A C 57 1_555 -0.121 -0.136 0.139 -5.236 -9.002 -3.033 19 B_G55:C71_B B 55 ? B 71 ? 19 1 1 A G 42 1_555 A C 56 1_555 -0.323 -0.177 0.173 1.567 -14.360 -2.957 20 B_G56:C70_B B 56 ? B 70 ? 19 1 1 A G 43 1_555 A U 55 1_555 -2.277 -0.570 0.098 1.761 -14.299 -3.366 21 B_G57:U69_B B 57 ? B 69 ? 28 1 1 A C 44 1_555 A G 54 1_555 0.149 -0.105 -0.006 5.766 -14.397 0.891 22 B_C58:G68_B B 58 ? B 68 ? 19 1 1 A A 45 1_555 A U 53 1_555 0.212 -0.049 -0.051 -2.993 -10.619 0.828 23 B_A59:U67_B B 59 ? B 67 ? 20 1 1 A C 46 1_555 A G 24 1_555 0.014 -0.072 0.321 -16.384 -13.398 -0.628 24 B_C60:G38_B B 60 ? B 38 ? 19 1 1 A C 47 1_555 A G 23 1_555 0.105 -0.164 0.554 -4.210 -10.008 -3.881 25 B_C61:G37_B B 61 ? B 37 ? 19 1 1 A A 50 1_555 A A 21 1_555 4.336 1.421 0.356 1.861 3.044 -111.281 26 B_A64:A35_B B 64 ? B 35 ? 5 4 1 A G 48 1_555 A U 49 1_555 8.023 1.747 0.503 -3.546 7.828 18.065 27 B_G62:U63_B B 62 ? B 63 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 67 1_555 A G 2 1_555 A C 66 1_555 0.259 -1.324 3.052 -10.539 9.250 34.617 -3.144 -1.627 2.452 14.815 16.879 37.269 1 BB_G15G16:C80C81_BB B 15 ? B 81 ? B 16 ? B 80 ? 1 A G 2 1_555 A C 66 1_555 A A 3 1_555 A U 65 1_555 -0.157 -0.907 3.191 -1.576 9.376 32.687 -2.959 0.032 2.835 16.236 2.729 34.006 2 BB_G16A17:U79C80_BB B 16 ? B 80 ? B 17 ? B 79 ? 1 A A 3 1_555 A U 65 1_555 A C 4 1_555 A G 64 1_555 0.655 -1.584 3.052 1.144 6.915 31.591 -3.927 -0.996 2.675 12.510 -2.070 32.340 3 BB_A17C18:G78U79_BB B 17 ? B 79 ? B 18 ? B 78 ? 1 A C 4 1_555 A G 64 1_555 A A 5 1_555 A U 63 1_555 0.248 -1.659 3.377 -0.417 11.863 31.542 -4.695 -0.492 2.598 20.919 0.735 33.648 4 BB_C18A19:U77G78_BB B 18 ? B 78 ? B 19 ? B 77 ? 1 A A 5 1_555 A U 63 1_555 A U 6 1_555 A A 62 1_555 -0.215 -1.163 3.358 0.921 13.503 31.446 -4.026 0.506 2.644 23.592 -1.609 34.167 5 BB_A19U20:A76U77_BB B 19 ? B 77 ? B 20 ? B 76 ? 1 A U 6 1_555 A A 62 1_555 A A 7 1_555 A U 61 1_555 0.487 -1.422 2.883 2.815 18.241 27.883 -4.808 -0.490 1.700 33.597 -5.184 33.337 6 BB_U20A21:U75A76_BB B 20 ? B 76 ? B 21 ? B 75 ? 1 A A 7 1_555 A U 61 1_555 A U 37 1_555 A U 33 1_555 -1.897 6.230 2.243 14.749 4.539 158.749 3.160 0.992 2.242 2.308 -7.501 158.944 7 BB_A21U51:U47U75_BB B 21 ? B 75 ? B 51 ? B 47 ? 1 A U 37 1_555 A U 33 1_555 A A 38 1_555 A U 8 1_555 -0.009 -0.941 3.237 -1.279 23.526 4.144 -8.082 -0.295 -0.360 80.046 4.353 23.917 8 BB_U51A52:U22U47_BB B 51 ? B 47 ? B 52 ? B 22 ? 1 A A 38 1_555 A U 8 1_555 A C 39 1_555 A G 32 1_555 2.019 0.140 2.501 1.758 10.830 43.382 -0.591 -2.530 2.540 14.378 -2.333 44.683 9 BB_A52C53:G46U22_BB B 52 ? B 22 ? B 53 ? B 46 ? 1 A C 39 1_555 A G 32 1_555 A U 11 1_555 A A 31 1_555 -1.972 -0.302 3.457 -15.659 2.060 53.535 -0.459 1.076 3.839 2.233 16.972 55.651 10 BB_C53U25:A45G46_BB B 53 ? B 46 ? B 25 ? B 45 ? 1 A U 11 1_555 A A 31 1_555 A C 12 1_555 A A 30 1_555 -0.141 -2.187 2.988 1.912 5.957 26.466 -5.911 0.703 2.431 12.785 -4.105 27.183 11 BB_U25C26:A44A45_BB B 25 ? B 45 ? B 26 ? B 44 ? 1 A C 12 1_555 A A 30 1_555 A G 13 1_555 A C 29 1_555 -0.392 -1.674 3.628 -0.107 13.279 35.634 -4.311 0.589 2.848 20.828 0.168 37.953 12 BB_C26G27:C43A44_BB B 26 ? B 44 ? B 27 ? B 43 ? 1 A G 13 1_555 A C 29 1_555 A C 14 1_555 A G 28 1_555 0.818 -2.454 3.042 0.276 3.859 24.490 -6.736 -1.833 2.638 9.026 -0.646 24.789 13 BB_G27C28:G42C43_BB B 27 ? B 43 ? B 28 ? B 42 ? 1 A C 14 1_555 A G 28 1_555 A G 15 1_555 A C 27 1_555 -0.668 -1.954 3.167 -0.751 8.900 28.392 -5.454 1.162 2.470 17.602 1.485 29.736 14 BB_C28G29:C41G42_BB B 28 ? B 42 ? B 29 ? B 41 ? 1 A G 15 1_555 A C 27 1_555 A U 16 1_555 A A 26 1_555 0.102 -1.337 3.222 -0.640 10.069 31.679 -3.901 -0.277 2.681 17.886 1.138 33.208 15 BB_G29U30:A40C41_BB B 29 ? B 41 ? B 30 ? B 40 ? 1 A U 16 1_555 A A 26 1_555 A G 17 1_555 A C 25 1_555 0.710 -1.808 3.302 -0.269 5.039 31.915 -4.114 -1.322 2.983 9.093 0.485 32.301 16 BB_U30G31:C39A40_BB B 30 ? B 40 ? B 31 ? B 39 ? 1 A C 40 1_555 A G 58 1_555 A G 41 1_555 A C 57 1_555 -0.950 -1.684 2.993 0.683 9.466 31.949 -4.266 1.754 2.390 16.742 -1.208 33.293 17 BB_C54G55:C71G72_BB B 54 ? B 72 ? B 55 ? B 71 ? 1 A G 41 1_555 A C 57 1_555 A G 42 1_555 A C 56 1_555 -0.075 -0.594 3.143 -0.840 8.006 32.093 -2.317 -0.001 2.915 14.205 1.490 33.061 18 BB_G55G56:C70C71_BB B 55 ? B 71 ? B 56 ? B 70 ? 1 A G 42 1_555 A C 56 1_555 A G 43 1_555 A U 55 1_555 0.091 -1.544 3.067 -3.029 8.674 26.604 -4.938 -0.802 2.427 18.174 6.347 28.118 19 BB_G56G57:U69C70_BB B 56 ? B 70 ? B 57 ? B 69 ? 1 A G 43 1_555 A U 55 1_555 A C 44 1_555 A G 54 1_555 0.427 -1.125 3.158 0.477 2.589 42.756 -1.788 -0.539 3.092 3.547 -0.653 42.833 20 BB_G57C58:G68U69_BB B 57 ? B 69 ? B 58 ? B 68 ? 1 A C 44 1_555 A G 54 1_555 A A 45 1_555 A U 53 1_555 0.461 -1.642 3.464 0.818 5.845 34.940 -3.576 -0.635 3.167 9.649 -1.350 35.419 21 BB_C58A59:U67G68_BB B 58 ? B 68 ? B 59 ? B 67 ? 1 A A 45 1_555 A U 53 1_555 A C 46 1_555 A G 24 1_555 2.074 -0.535 3.295 4.867 7.911 53.782 -1.074 -1.962 3.353 8.672 -5.335 54.519 22 BB_A59C60:G38U67_BB B 59 ? B 67 ? B 60 ? B 38 ? 1 A C 46 1_555 A G 24 1_555 A C 47 1_555 A G 23 1_555 -0.624 -0.695 3.134 -2.888 6.705 28.842 -2.682 0.645 2.948 13.197 5.684 29.732 23 BB_C60C61:G37G38_BB B 60 ? B 38 ? B 61 ? B 37 ? 1 A C 47 1_555 A G 23 1_555 A A 50 1_555 A A 21 1_555 3.299 1.316 4.345 68.083 -160.311 -179.827 -0.655 1.651 4.345 80.155 34.042 -179.991 24 BB_C61A64:A35G37_BB B 61 ? B 37 ? B 64 ? B 35 ? 1 A A 50 1_555 A A 21 1_555 A G 48 1_555 A U 49 1_555 -3.012 -2.655 3.682 20.848 -173.647 107.056 -0.021 1.663 4.315 -87.320 -10.484 176.966 25 BB_A64G62:U63A35_BB B 64 ? B 35 ? B 62 ? B 63 ? # _atom_sites.entry_id 4FEJ _atom_sites.fract_transf_matrix[1][1] 0.007536 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000079 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028385 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023871 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P # loop_