data_4FEN # _entry.id 4FEN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4FEN pdb_00004fen 10.2210/pdb4fen/pdb NDB NA1836 ? ? RCSB RCSB072805 ? ? WWPDB D_1000072805 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-27 2 'Structure model' 1 1 2013-03-27 3 'Structure model' 1 2 2013-05-22 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4FEN _pdbx_database_status.recvd_initial_deposition_date 2012-05-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1u8d . unspecified PDB 4FE5 . unspecified PDB 4FEJ . unspecified PDB 4FEL . unspecified PDB 4FEO . unspecified PDB 4FEP . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stoddard, C.D.' 1 'Trausch, J.J.' 2 'Widmann, J.' 3 'Marcano, J.' 4 'Knight, R.' 5 'Batey, R.T.' 6 # _citation.id primary _citation.title 'Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 425 _citation.page_first 1596 _citation.page_last 1611 _citation.year 2013 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23485418 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2013.02.023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stoddard, C.D.' 1 ? primary 'Widmann, J.' 2 ? primary 'Trausch, J.J.' 3 ? primary 'Marcano-Velazquez, J.G.' 4 ? primary 'Knight, R.' 5 ? primary 'Batey, R.T.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'A24U/U25A/A46G mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain' 21522.785 1 ? ? ? ? 2 non-polymer syn HYPOXANTHINE 136.111 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 7 ? ? ? ? 5 water nat water 18.015 598 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGACAUAUAUACGCGUGGAUAUGGCACGCGAGUUUCUACCGGGCACCGUAAAUGUCCGACUAUGUCC _entity_poly.pdbx_seq_one_letter_code_can GGACAUAUAUACGCGUGGAUAUGGCACGCGAGUUUCUACCGGGCACCGUAAAUGUCCGACUAUGUCC _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 HYPOXANTHINE HPA 3 'ACETATE ION' ACT 4 'COBALT HEXAMMINE(III)' NCO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 C n 1 5 A n 1 6 U n 1 7 A n 1 8 U n 1 9 A n 1 10 U n 1 11 A n 1 12 C n 1 13 G n 1 14 C n 1 15 G n 1 16 U n 1 17 G n 1 18 G n 1 19 A n 1 20 U n 1 21 A n 1 22 U n 1 23 G n 1 24 G n 1 25 C n 1 26 A n 1 27 C n 1 28 G n 1 29 C n 1 30 G n 1 31 A n 1 32 G n 1 33 U n 1 34 U n 1 35 U n 1 36 C n 1 37 U n 1 38 A n 1 39 C n 1 40 C n 1 41 G n 1 42 G n 1 43 G n 1 44 C n 1 45 A n 1 46 C n 1 47 C n 1 48 G n 1 49 U n 1 50 A n 1 51 A n 1 52 A n 1 53 U n 1 54 G n 1 55 U n 1 56 C n 1 57 C n 1 58 G n 1 59 A n 1 60 C n 1 61 U n 1 62 A n 1 63 U n 1 64 G n 1 65 U n 1 66 C n 1 67 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'T7 RNAP transcript' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 HPA non-polymer . HYPOXANTHINE ? 'C5 H4 N4 O' 136.111 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 15 15 G G B . n A 1 2 G 2 16 16 G G B . n A 1 3 A 3 17 17 A A B . n A 1 4 C 4 18 18 C C B . n A 1 5 A 5 19 19 A A B . n A 1 6 U 6 20 20 U U B . n A 1 7 A 7 21 21 A A B . n A 1 8 U 8 22 22 U U B . n A 1 9 A 9 23 23 A A B . n A 1 10 U 10 24 24 U U B . n A 1 11 A 11 25 25 A A B . n A 1 12 C 12 26 26 C C B . n A 1 13 G 13 27 27 G G B . n A 1 14 C 14 28 28 C C B . n A 1 15 G 15 29 29 G G B . n A 1 16 U 16 30 30 U U B . n A 1 17 G 17 31 31 G G B . n A 1 18 G 18 32 32 G G B . n A 1 19 A 19 33 33 A A B . n A 1 20 U 20 34 34 U U B . n A 1 21 A 21 35 35 A A B . n A 1 22 U 22 36 36 U U B . n A 1 23 G 23 37 37 G G B . n A 1 24 G 24 38 38 G G B . n A 1 25 C 25 39 39 C C B . n A 1 26 A 26 40 40 A A B . n A 1 27 C 27 41 41 C C B . n A 1 28 G 28 42 42 G G B . n A 1 29 C 29 43 43 C C B . n A 1 30 G 30 44 44 G G B . n A 1 31 A 31 45 45 A A B . n A 1 32 G 32 46 46 G G B . n A 1 33 U 33 47 47 U U B . n A 1 34 U 34 48 48 U U B . n A 1 35 U 35 49 49 U U B . n A 1 36 C 36 50 50 C C B . n A 1 37 U 37 51 51 U U B . n A 1 38 A 38 52 52 A A B . n A 1 39 C 39 53 53 C C B . n A 1 40 C 40 54 54 C C B . n A 1 41 G 41 55 55 G G B . n A 1 42 G 42 56 56 G G B . n A 1 43 G 43 57 57 G G B . n A 1 44 C 44 58 58 C C B . n A 1 45 A 45 59 59 A A B . n A 1 46 C 46 60 60 C C B . n A 1 47 C 47 61 61 C C B . n A 1 48 G 48 62 62 G G B . n A 1 49 U 49 63 63 U U B . n A 1 50 A 50 64 64 A A B . n A 1 51 A 51 65 65 A A B . n A 1 52 A 52 66 66 A A B . n A 1 53 U 53 67 67 U U B . n A 1 54 G 54 68 68 G G B . n A 1 55 U 55 69 69 U U B . n A 1 56 C 56 70 70 C C B . n A 1 57 C 57 71 71 C C B . n A 1 58 G 58 72 72 G G B . n A 1 59 A 59 73 73 A A B . n A 1 60 C 60 74 74 C C B . n A 1 61 U 61 75 75 U U B . n A 1 62 A 62 76 76 A A B . n A 1 63 U 63 77 77 U U B . n A 1 64 G 64 78 78 G G B . n A 1 65 U 65 79 79 U U B . n A 1 66 C 66 80 80 C C B . n A 1 67 C 67 81 81 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HPA 1 101 90 HPA HPA B . C 3 ACT 1 102 96 ACT ACT B . D 4 NCO 1 103 101 NCO NCO B . E 4 NCO 1 104 103 NCO NCO B . F 4 NCO 1 105 102 NCO NCO B . G 4 NCO 1 106 104 NCO NCO B . H 4 NCO 1 107 105 NCO NCO B . I 4 NCO 1 108 108 NCO NCO B . J 4 NCO 1 109 112 NCO NCO B . K 5 HOH 1 300 300 HOH HOH B . K 5 HOH 2 301 301 HOH HOH B . K 5 HOH 3 302 302 HOH HOH B . K 5 HOH 4 303 303 HOH HOH B . K 5 HOH 5 304 304 HOH HOH B . K 5 HOH 6 305 305 HOH HOH B . K 5 HOH 7 306 306 HOH HOH B . K 5 HOH 8 307 307 HOH HOH B . K 5 HOH 9 308 308 HOH HOH B . K 5 HOH 10 309 309 HOH HOH B . K 5 HOH 11 310 310 HOH HOH B . K 5 HOH 12 311 311 HOH HOH B . K 5 HOH 13 312 312 HOH HOH B . K 5 HOH 14 313 313 HOH HOH B . K 5 HOH 15 314 314 HOH HOH B . K 5 HOH 16 315 315 HOH HOH B . K 5 HOH 17 316 316 HOH HOH B . K 5 HOH 18 317 317 HOH HOH B . K 5 HOH 19 318 318 HOH HOH B . K 5 HOH 20 319 319 HOH HOH B . K 5 HOH 21 320 320 HOH HOH B . K 5 HOH 22 321 321 HOH HOH B . K 5 HOH 23 322 322 HOH HOH B . K 5 HOH 24 323 323 HOH HOH B . K 5 HOH 25 324 324 HOH HOH B . K 5 HOH 26 325 325 HOH HOH B . K 5 HOH 27 326 326 HOH HOH B . K 5 HOH 28 327 327 HOH HOH B . K 5 HOH 29 328 328 HOH HOH B . K 5 HOH 30 329 329 HOH HOH B . K 5 HOH 31 330 330 HOH HOH B . K 5 HOH 32 331 331 HOH HOH B . K 5 HOH 33 332 332 HOH HOH B . K 5 HOH 34 333 333 HOH HOH B . K 5 HOH 35 334 334 HOH HOH B . K 5 HOH 36 335 335 HOH HOH B . K 5 HOH 37 336 336 HOH HOH B . K 5 HOH 38 337 337 HOH HOH B . K 5 HOH 39 338 338 HOH HOH B . K 5 HOH 40 339 339 HOH HOH B . K 5 HOH 41 340 340 HOH HOH B . K 5 HOH 42 341 341 HOH HOH B . K 5 HOH 43 342 342 HOH HOH B . K 5 HOH 44 343 343 HOH HOH B . K 5 HOH 45 344 344 HOH HOH B . K 5 HOH 46 345 345 HOH HOH B . K 5 HOH 47 346 346 HOH HOH B . K 5 HOH 48 347 347 HOH HOH B . K 5 HOH 49 348 348 HOH HOH B . K 5 HOH 50 349 349 HOH HOH B . K 5 HOH 51 350 350 HOH HOH B . K 5 HOH 52 351 351 HOH HOH B . K 5 HOH 53 352 352 HOH HOH B . K 5 HOH 54 353 353 HOH HOH B . K 5 HOH 55 354 354 HOH HOH B . K 5 HOH 56 355 355 HOH HOH B . K 5 HOH 57 356 356 HOH HOH B . K 5 HOH 58 357 357 HOH HOH B . K 5 HOH 59 358 358 HOH HOH B . K 5 HOH 60 359 359 HOH HOH B . K 5 HOH 61 360 360 HOH HOH B . K 5 HOH 62 361 361 HOH HOH B . K 5 HOH 63 362 362 HOH HOH B . K 5 HOH 64 363 363 HOH HOH B . K 5 HOH 65 364 364 HOH HOH B . K 5 HOH 66 365 365 HOH HOH B . K 5 HOH 67 366 366 HOH HOH B . K 5 HOH 68 367 367 HOH HOH B . K 5 HOH 69 368 368 HOH HOH B . K 5 HOH 70 369 369 HOH HOH B . K 5 HOH 71 370 370 HOH HOH B . K 5 HOH 72 371 371 HOH HOH B . K 5 HOH 73 372 372 HOH HOH B . K 5 HOH 74 373 373 HOH HOH B . K 5 HOH 75 374 374 HOH HOH B . K 5 HOH 76 375 375 HOH HOH B . K 5 HOH 77 376 376 HOH HOH B . K 5 HOH 78 377 377 HOH HOH B . K 5 HOH 79 378 378 HOH HOH B . K 5 HOH 80 379 379 HOH HOH B . K 5 HOH 81 380 380 HOH HOH B . K 5 HOH 82 381 381 HOH HOH B . K 5 HOH 83 382 382 HOH HOH B . K 5 HOH 84 383 383 HOH HOH B . K 5 HOH 85 384 384 HOH HOH B . K 5 HOH 86 385 385 HOH HOH B . K 5 HOH 87 386 386 HOH HOH B . K 5 HOH 88 387 387 HOH HOH B . K 5 HOH 89 388 388 HOH HOH B . K 5 HOH 90 389 389 HOH HOH B . K 5 HOH 91 390 390 HOH HOH B . K 5 HOH 92 391 391 HOH HOH B . K 5 HOH 93 392 392 HOH HOH B . K 5 HOH 94 393 393 HOH HOH B . K 5 HOH 95 394 394 HOH HOH B . K 5 HOH 96 395 395 HOH HOH B . K 5 HOH 97 396 396 HOH HOH B . K 5 HOH 98 397 397 HOH HOH B . K 5 HOH 99 398 398 HOH HOH B . K 5 HOH 100 399 399 HOH HOH B . K 5 HOH 101 400 400 HOH HOH B . K 5 HOH 102 401 401 HOH HOH B . K 5 HOH 103 402 402 HOH HOH B . K 5 HOH 104 403 403 HOH HOH B . K 5 HOH 105 404 404 HOH HOH B . K 5 HOH 106 405 405 HOH HOH B . K 5 HOH 107 406 406 HOH HOH B . K 5 HOH 108 407 407 HOH HOH B . K 5 HOH 109 408 408 HOH HOH B . K 5 HOH 110 409 409 HOH HOH B . K 5 HOH 111 410 410 HOH HOH B . K 5 HOH 112 411 411 HOH HOH B . K 5 HOH 113 412 412 HOH HOH B . K 5 HOH 114 413 413 HOH HOH B . K 5 HOH 115 414 414 HOH HOH B . K 5 HOH 116 415 415 HOH HOH B . K 5 HOH 117 416 416 HOH HOH B . K 5 HOH 118 417 417 HOH HOH B . K 5 HOH 119 418 418 HOH HOH B . K 5 HOH 120 419 419 HOH HOH B . K 5 HOH 121 420 420 HOH HOH B . K 5 HOH 122 421 421 HOH HOH B . K 5 HOH 123 422 422 HOH HOH B . K 5 HOH 124 423 423 HOH HOH B . K 5 HOH 125 424 424 HOH HOH B . K 5 HOH 126 425 425 HOH HOH B . K 5 HOH 127 426 426 HOH HOH B . K 5 HOH 128 427 427 HOH HOH B . K 5 HOH 129 428 428 HOH HOH B . K 5 HOH 130 429 429 HOH HOH B . K 5 HOH 131 430 430 HOH HOH B . K 5 HOH 132 431 431 HOH HOH B . K 5 HOH 133 432 432 HOH HOH B . K 5 HOH 134 433 433 HOH HOH B . K 5 HOH 135 434 434 HOH HOH B . K 5 HOH 136 435 435 HOH HOH B . K 5 HOH 137 436 436 HOH HOH B . K 5 HOH 138 437 437 HOH HOH B . K 5 HOH 139 438 438 HOH HOH B . K 5 HOH 140 439 439 HOH HOH B . K 5 HOH 141 440 440 HOH HOH B . K 5 HOH 142 441 441 HOH HOH B . K 5 HOH 143 442 442 HOH HOH B . K 5 HOH 144 443 443 HOH HOH B . K 5 HOH 145 444 444 HOH HOH B . K 5 HOH 146 445 445 HOH HOH B . K 5 HOH 147 446 446 HOH HOH B . K 5 HOH 148 447 447 HOH HOH B . K 5 HOH 149 448 448 HOH HOH B . K 5 HOH 150 449 449 HOH HOH B . K 5 HOH 151 450 450 HOH HOH B . K 5 HOH 152 451 451 HOH HOH B . K 5 HOH 153 452 452 HOH HOH B . K 5 HOH 154 453 453 HOH HOH B . K 5 HOH 155 454 454 HOH HOH B . K 5 HOH 156 455 455 HOH HOH B . K 5 HOH 157 456 456 HOH HOH B . K 5 HOH 158 457 457 HOH HOH B . K 5 HOH 159 458 458 HOH HOH B . K 5 HOH 160 459 459 HOH HOH B . K 5 HOH 161 460 460 HOH HOH B . K 5 HOH 162 461 461 HOH HOH B . K 5 HOH 163 462 462 HOH HOH B . K 5 HOH 164 463 463 HOH HOH B . K 5 HOH 165 464 464 HOH HOH B . K 5 HOH 166 465 465 HOH HOH B . K 5 HOH 167 466 466 HOH HOH B . K 5 HOH 168 467 467 HOH HOH B . K 5 HOH 169 468 468 HOH HOH B . K 5 HOH 170 469 469 HOH HOH B . K 5 HOH 171 470 470 HOH HOH B . K 5 HOH 172 471 471 HOH HOH B . K 5 HOH 173 472 472 HOH HOH B . K 5 HOH 174 473 473 HOH HOH B . K 5 HOH 175 474 474 HOH HOH B . K 5 HOH 176 475 475 HOH HOH B . K 5 HOH 177 476 476 HOH HOH B . K 5 HOH 178 477 477 HOH HOH B . K 5 HOH 179 478 478 HOH HOH B . K 5 HOH 180 479 479 HOH HOH B . K 5 HOH 181 480 480 HOH HOH B . K 5 HOH 182 481 481 HOH HOH B . K 5 HOH 183 482 482 HOH HOH B . K 5 HOH 184 483 483 HOH HOH B . K 5 HOH 185 484 484 HOH HOH B . K 5 HOH 186 485 485 HOH HOH B . K 5 HOH 187 486 486 HOH HOH B . K 5 HOH 188 487 487 HOH HOH B . K 5 HOH 189 488 488 HOH HOH B . K 5 HOH 190 489 489 HOH HOH B . K 5 HOH 191 490 490 HOH HOH B . K 5 HOH 192 491 491 HOH HOH B . K 5 HOH 193 492 492 HOH HOH B . K 5 HOH 194 493 493 HOH HOH B . K 5 HOH 195 494 494 HOH HOH B . K 5 HOH 196 495 495 HOH HOH B . K 5 HOH 197 496 496 HOH HOH B . K 5 HOH 198 497 497 HOH HOH B . K 5 HOH 199 498 498 HOH HOH B . K 5 HOH 200 499 499 HOH HOH B . K 5 HOH 201 500 500 HOH HOH B . K 5 HOH 202 501 501 HOH HOH B . K 5 HOH 203 502 502 HOH HOH B . K 5 HOH 204 503 503 HOH HOH B . K 5 HOH 205 504 504 HOH HOH B . K 5 HOH 206 505 505 HOH HOH B . K 5 HOH 207 506 506 HOH HOH B . K 5 HOH 208 507 507 HOH HOH B . K 5 HOH 209 508 508 HOH HOH B . K 5 HOH 210 509 509 HOH HOH B . K 5 HOH 211 510 510 HOH HOH B . K 5 HOH 212 511 511 HOH HOH B . K 5 HOH 213 512 512 HOH HOH B . K 5 HOH 214 513 513 HOH HOH B . K 5 HOH 215 514 514 HOH HOH B . K 5 HOH 216 515 515 HOH HOH B . K 5 HOH 217 516 516 HOH HOH B . K 5 HOH 218 517 517 HOH HOH B . K 5 HOH 219 518 518 HOH HOH B . K 5 HOH 220 519 519 HOH HOH B . K 5 HOH 221 520 520 HOH HOH B . K 5 HOH 222 521 521 HOH HOH B . K 5 HOH 223 522 522 HOH HOH B . K 5 HOH 224 523 523 HOH HOH B . K 5 HOH 225 524 524 HOH HOH B . K 5 HOH 226 525 525 HOH HOH B . K 5 HOH 227 526 526 HOH HOH B . K 5 HOH 228 527 527 HOH HOH B . K 5 HOH 229 528 528 HOH HOH B . K 5 HOH 230 529 529 HOH HOH B . K 5 HOH 231 530 530 HOH HOH B . K 5 HOH 232 531 531 HOH HOH B . K 5 HOH 233 532 532 HOH HOH B . K 5 HOH 234 533 533 HOH HOH B . K 5 HOH 235 534 534 HOH HOH B . K 5 HOH 236 535 535 HOH HOH B . K 5 HOH 237 536 536 HOH HOH B . K 5 HOH 238 537 537 HOH HOH B . K 5 HOH 239 538 538 HOH HOH B . K 5 HOH 240 539 539 HOH HOH B . K 5 HOH 241 540 540 HOH HOH B . K 5 HOH 242 541 541 HOH HOH B . K 5 HOH 243 542 542 HOH HOH B . K 5 HOH 244 543 543 HOH HOH B . K 5 HOH 245 544 544 HOH HOH B . K 5 HOH 246 545 545 HOH HOH B . K 5 HOH 247 546 546 HOH HOH B . K 5 HOH 248 547 547 HOH HOH B . K 5 HOH 249 548 548 HOH HOH B . K 5 HOH 250 549 549 HOH HOH B . K 5 HOH 251 550 550 HOH HOH B . K 5 HOH 252 551 551 HOH HOH B . K 5 HOH 253 552 552 HOH HOH B . K 5 HOH 254 553 553 HOH HOH B . K 5 HOH 255 554 554 HOH HOH B . K 5 HOH 256 555 555 HOH HOH B . K 5 HOH 257 556 556 HOH HOH B . K 5 HOH 258 557 557 HOH HOH B . K 5 HOH 259 558 558 HOH HOH B . K 5 HOH 260 559 559 HOH HOH B . K 5 HOH 261 560 560 HOH HOH B . K 5 HOH 262 561 561 HOH HOH B . K 5 HOH 263 562 562 HOH HOH B . K 5 HOH 264 563 563 HOH HOH B . K 5 HOH 265 564 564 HOH HOH B . K 5 HOH 266 565 565 HOH HOH B . K 5 HOH 267 566 566 HOH HOH B . K 5 HOH 268 567 567 HOH HOH B . K 5 HOH 269 568 568 HOH HOH B . K 5 HOH 270 569 569 HOH HOH B . K 5 HOH 271 570 570 HOH HOH B . K 5 HOH 272 571 571 HOH HOH B . K 5 HOH 273 572 572 HOH HOH B . K 5 HOH 274 573 573 HOH HOH B . K 5 HOH 275 574 574 HOH HOH B . K 5 HOH 276 575 575 HOH HOH B . K 5 HOH 277 576 576 HOH HOH B . K 5 HOH 278 577 577 HOH HOH B . K 5 HOH 279 578 578 HOH HOH B . K 5 HOH 280 579 579 HOH HOH B . K 5 HOH 281 580 580 HOH HOH B . K 5 HOH 282 581 581 HOH HOH B . K 5 HOH 283 582 582 HOH HOH B . K 5 HOH 284 583 583 HOH HOH B . K 5 HOH 285 584 584 HOH HOH B . K 5 HOH 286 585 585 HOH HOH B . K 5 HOH 287 586 586 HOH HOH B . K 5 HOH 288 587 587 HOH HOH B . K 5 HOH 289 588 588 HOH HOH B . K 5 HOH 290 589 589 HOH HOH B . K 5 HOH 291 590 590 HOH HOH B . K 5 HOH 292 591 591 HOH HOH B . K 5 HOH 293 592 592 HOH HOH B . K 5 HOH 294 593 593 HOH HOH B . K 5 HOH 295 594 594 HOH HOH B . K 5 HOH 296 595 595 HOH HOH B . K 5 HOH 297 596 596 HOH HOH B . K 5 HOH 298 597 597 HOH HOH B . K 5 HOH 299 598 598 HOH HOH B . K 5 HOH 300 599 599 HOH HOH B . K 5 HOH 301 600 600 HOH HOH B . K 5 HOH 302 601 601 HOH HOH B . K 5 HOH 303 602 602 HOH HOH B . K 5 HOH 304 603 603 HOH HOH B . K 5 HOH 305 604 604 HOH HOH B . K 5 HOH 306 605 605 HOH HOH B . K 5 HOH 307 606 606 HOH HOH B . K 5 HOH 308 607 607 HOH HOH B . K 5 HOH 309 608 608 HOH HOH B . K 5 HOH 310 609 609 HOH HOH B . K 5 HOH 311 610 610 HOH HOH B . K 5 HOH 312 611 611 HOH HOH B . K 5 HOH 313 612 612 HOH HOH B . K 5 HOH 314 613 613 HOH HOH B . K 5 HOH 315 614 614 HOH HOH B . K 5 HOH 316 615 615 HOH HOH B . K 5 HOH 317 616 616 HOH HOH B . K 5 HOH 318 617 617 HOH HOH B . K 5 HOH 319 618 618 HOH HOH B . K 5 HOH 320 619 619 HOH HOH B . K 5 HOH 321 620 620 HOH HOH B . K 5 HOH 322 621 621 HOH HOH B . K 5 HOH 323 622 622 HOH HOH B . K 5 HOH 324 623 623 HOH HOH B . K 5 HOH 325 624 624 HOH HOH B . K 5 HOH 326 625 625 HOH HOH B . K 5 HOH 327 626 626 HOH HOH B . K 5 HOH 328 627 627 HOH HOH B . K 5 HOH 329 628 628 HOH HOH B . K 5 HOH 330 629 629 HOH HOH B . K 5 HOH 331 630 630 HOH HOH B . K 5 HOH 332 631 631 HOH HOH B . K 5 HOH 333 632 632 HOH HOH B . K 5 HOH 334 633 633 HOH HOH B . K 5 HOH 335 634 634 HOH HOH B . K 5 HOH 336 635 635 HOH HOH B . K 5 HOH 337 636 636 HOH HOH B . K 5 HOH 338 637 637 HOH HOH B . K 5 HOH 339 638 638 HOH HOH B . K 5 HOH 340 639 639 HOH HOH B . K 5 HOH 341 640 640 HOH HOH B . K 5 HOH 342 641 641 HOH HOH B . K 5 HOH 343 642 642 HOH HOH B . K 5 HOH 344 643 643 HOH HOH B . K 5 HOH 345 644 644 HOH HOH B . K 5 HOH 346 645 645 HOH HOH B . K 5 HOH 347 646 646 HOH HOH B . K 5 HOH 348 647 647 HOH HOH B . K 5 HOH 349 648 648 HOH HOH B . K 5 HOH 350 649 649 HOH HOH B . K 5 HOH 351 650 650 HOH HOH B . K 5 HOH 352 651 651 HOH HOH B . K 5 HOH 353 652 652 HOH HOH B . K 5 HOH 354 653 653 HOH HOH B . K 5 HOH 355 654 654 HOH HOH B . K 5 HOH 356 655 655 HOH HOH B . K 5 HOH 357 656 656 HOH HOH B . K 5 HOH 358 657 657 HOH HOH B . K 5 HOH 359 658 658 HOH HOH B . K 5 HOH 360 659 659 HOH HOH B . K 5 HOH 361 660 660 HOH HOH B . K 5 HOH 362 661 661 HOH HOH B . K 5 HOH 363 662 662 HOH HOH B . K 5 HOH 364 663 663 HOH HOH B . K 5 HOH 365 664 664 HOH HOH B . K 5 HOH 366 665 665 HOH HOH B . K 5 HOH 367 666 666 HOH HOH B . K 5 HOH 368 667 667 HOH HOH B . K 5 HOH 369 668 668 HOH HOH B . K 5 HOH 370 669 669 HOH HOH B . K 5 HOH 371 670 670 HOH HOH B . K 5 HOH 372 671 671 HOH HOH B . K 5 HOH 373 672 672 HOH HOH B . K 5 HOH 374 673 673 HOH HOH B . K 5 HOH 375 674 674 HOH HOH B . K 5 HOH 376 675 675 HOH HOH B . K 5 HOH 377 676 676 HOH HOH B . K 5 HOH 378 677 677 HOH HOH B . K 5 HOH 379 678 678 HOH HOH B . K 5 HOH 380 679 679 HOH HOH B . K 5 HOH 381 680 680 HOH HOH B . K 5 HOH 382 681 681 HOH HOH B . K 5 HOH 383 682 682 HOH HOH B . K 5 HOH 384 683 683 HOH HOH B . K 5 HOH 385 684 684 HOH HOH B . K 5 HOH 386 685 685 HOH HOH B . K 5 HOH 387 686 686 HOH HOH B . K 5 HOH 388 687 687 HOH HOH B . K 5 HOH 389 688 688 HOH HOH B . K 5 HOH 390 689 689 HOH HOH B . K 5 HOH 391 690 690 HOH HOH B . K 5 HOH 392 691 691 HOH HOH B . K 5 HOH 393 692 692 HOH HOH B . K 5 HOH 394 693 693 HOH HOH B . K 5 HOH 395 694 694 HOH HOH B . K 5 HOH 396 695 695 HOH HOH B . K 5 HOH 397 696 696 HOH HOH B . K 5 HOH 398 697 697 HOH HOH B . K 5 HOH 399 698 698 HOH HOH B . K 5 HOH 400 699 699 HOH HOH B . K 5 HOH 401 700 700 HOH HOH B . K 5 HOH 402 701 701 HOH HOH B . K 5 HOH 403 702 702 HOH HOH B . K 5 HOH 404 703 703 HOH HOH B . K 5 HOH 405 704 704 HOH HOH B . K 5 HOH 406 705 705 HOH HOH B . K 5 HOH 407 706 706 HOH HOH B . K 5 HOH 408 707 707 HOH HOH B . K 5 HOH 409 708 708 HOH HOH B . K 5 HOH 410 709 709 HOH HOH B . K 5 HOH 411 710 710 HOH HOH B . K 5 HOH 412 711 711 HOH HOH B . K 5 HOH 413 712 712 HOH HOH B . K 5 HOH 414 713 713 HOH HOH B . K 5 HOH 415 714 714 HOH HOH B . K 5 HOH 416 715 715 HOH HOH B . K 5 HOH 417 716 716 HOH HOH B . K 5 HOH 418 717 717 HOH HOH B . K 5 HOH 419 718 718 HOH HOH B . K 5 HOH 420 719 719 HOH HOH B . K 5 HOH 421 720 720 HOH HOH B . K 5 HOH 422 721 721 HOH HOH B . K 5 HOH 423 722 722 HOH HOH B . K 5 HOH 424 723 723 HOH HOH B . K 5 HOH 425 724 724 HOH HOH B . K 5 HOH 426 725 725 HOH HOH B . K 5 HOH 427 726 726 HOH HOH B . K 5 HOH 428 727 727 HOH HOH B . K 5 HOH 429 728 728 HOH HOH B . K 5 HOH 430 729 729 HOH HOH B . K 5 HOH 431 730 730 HOH HOH B . K 5 HOH 432 731 731 HOH HOH B . K 5 HOH 433 732 732 HOH HOH B . K 5 HOH 434 733 733 HOH HOH B . K 5 HOH 435 734 734 HOH HOH B . K 5 HOH 436 735 735 HOH HOH B . K 5 HOH 437 736 736 HOH HOH B . K 5 HOH 438 737 737 HOH HOH B . K 5 HOH 439 738 738 HOH HOH B . K 5 HOH 440 739 739 HOH HOH B . K 5 HOH 441 740 740 HOH HOH B . K 5 HOH 442 741 741 HOH HOH B . K 5 HOH 443 742 742 HOH HOH B . K 5 HOH 444 743 743 HOH HOH B . K 5 HOH 445 744 744 HOH HOH B . K 5 HOH 446 745 745 HOH HOH B . K 5 HOH 447 746 746 HOH HOH B . K 5 HOH 448 747 747 HOH HOH B . K 5 HOH 449 748 748 HOH HOH B . K 5 HOH 450 749 749 HOH HOH B . K 5 HOH 451 750 750 HOH HOH B . K 5 HOH 452 751 751 HOH HOH B . K 5 HOH 453 752 752 HOH HOH B . K 5 HOH 454 753 753 HOH HOH B . K 5 HOH 455 754 754 HOH HOH B . K 5 HOH 456 755 755 HOH HOH B . K 5 HOH 457 756 756 HOH HOH B . K 5 HOH 458 757 757 HOH HOH B . K 5 HOH 459 758 758 HOH HOH B . K 5 HOH 460 759 759 HOH HOH B . K 5 HOH 461 760 760 HOH HOH B . K 5 HOH 462 761 761 HOH HOH B . K 5 HOH 463 762 762 HOH HOH B . K 5 HOH 464 763 763 HOH HOH B . K 5 HOH 465 764 764 HOH HOH B . K 5 HOH 466 765 765 HOH HOH B . K 5 HOH 467 766 766 HOH HOH B . K 5 HOH 468 767 767 HOH HOH B . K 5 HOH 469 768 768 HOH HOH B . K 5 HOH 470 769 769 HOH HOH B . K 5 HOH 471 770 770 HOH HOH B . K 5 HOH 472 771 771 HOH HOH B . K 5 HOH 473 772 772 HOH HOH B . K 5 HOH 474 773 773 HOH HOH B . K 5 HOH 475 774 774 HOH HOH B . K 5 HOH 476 775 775 HOH HOH B . K 5 HOH 477 776 776 HOH HOH B . K 5 HOH 478 777 777 HOH HOH B . K 5 HOH 479 778 778 HOH HOH B . K 5 HOH 480 779 779 HOH HOH B . K 5 HOH 481 780 780 HOH HOH B . K 5 HOH 482 781 781 HOH HOH B . K 5 HOH 483 782 782 HOH HOH B . K 5 HOH 484 783 783 HOH HOH B . K 5 HOH 485 784 784 HOH HOH B . K 5 HOH 486 785 785 HOH HOH B . K 5 HOH 487 786 786 HOH HOH B . K 5 HOH 488 787 787 HOH HOH B . K 5 HOH 489 788 788 HOH HOH B . K 5 HOH 490 789 789 HOH HOH B . K 5 HOH 491 790 790 HOH HOH B . K 5 HOH 492 791 791 HOH HOH B . K 5 HOH 493 792 792 HOH HOH B . K 5 HOH 494 793 793 HOH HOH B . K 5 HOH 495 794 794 HOH HOH B . K 5 HOH 496 795 795 HOH HOH B . K 5 HOH 497 796 796 HOH HOH B . K 5 HOH 498 797 797 HOH HOH B . K 5 HOH 499 798 798 HOH HOH B . K 5 HOH 500 799 799 HOH HOH B . K 5 HOH 501 800 800 HOH HOH B . K 5 HOH 502 801 801 HOH HOH B . K 5 HOH 503 802 802 HOH HOH B . K 5 HOH 504 803 803 HOH HOH B . K 5 HOH 505 804 804 HOH HOH B . K 5 HOH 506 805 805 HOH HOH B . K 5 HOH 507 806 806 HOH HOH B . K 5 HOH 508 807 807 HOH HOH B . K 5 HOH 509 808 808 HOH HOH B . K 5 HOH 510 809 809 HOH HOH B . K 5 HOH 511 810 810 HOH HOH B . K 5 HOH 512 811 811 HOH HOH B . K 5 HOH 513 812 812 HOH HOH B . K 5 HOH 514 813 813 HOH HOH B . K 5 HOH 515 814 814 HOH HOH B . K 5 HOH 516 815 815 HOH HOH B . K 5 HOH 517 816 816 HOH HOH B . K 5 HOH 518 817 817 HOH HOH B . K 5 HOH 519 818 818 HOH HOH B . K 5 HOH 520 819 819 HOH HOH B . K 5 HOH 521 820 820 HOH HOH B . K 5 HOH 522 821 821 HOH HOH B . K 5 HOH 523 822 822 HOH HOH B . K 5 HOH 524 823 823 HOH HOH B . K 5 HOH 525 824 824 HOH HOH B . K 5 HOH 526 825 825 HOH HOH B . K 5 HOH 527 826 826 HOH HOH B . K 5 HOH 528 827 827 HOH HOH B . K 5 HOH 529 828 828 HOH HOH B . K 5 HOH 530 829 829 HOH HOH B . K 5 HOH 531 830 830 HOH HOH B . K 5 HOH 532 831 831 HOH HOH B . K 5 HOH 533 832 832 HOH HOH B . K 5 HOH 534 833 833 HOH HOH B . K 5 HOH 535 834 834 HOH HOH B . K 5 HOH 536 835 835 HOH HOH B . K 5 HOH 537 836 836 HOH HOH B . K 5 HOH 538 837 837 HOH HOH B . K 5 HOH 539 838 838 HOH HOH B . K 5 HOH 540 839 839 HOH HOH B . K 5 HOH 541 840 840 HOH HOH B . K 5 HOH 542 841 841 HOH HOH B . K 5 HOH 543 842 842 HOH HOH B . K 5 HOH 544 843 843 HOH HOH B . K 5 HOH 545 844 844 HOH HOH B . K 5 HOH 546 845 845 HOH HOH B . K 5 HOH 547 846 846 HOH HOH B . K 5 HOH 548 847 847 HOH HOH B . K 5 HOH 549 848 848 HOH HOH B . K 5 HOH 550 849 849 HOH HOH B . K 5 HOH 551 850 850 HOH HOH B . K 5 HOH 552 851 851 HOH HOH B . K 5 HOH 553 852 852 HOH HOH B . K 5 HOH 554 853 853 HOH HOH B . K 5 HOH 555 854 854 HOH HOH B . K 5 HOH 556 855 855 HOH HOH B . K 5 HOH 557 856 856 HOH HOH B . K 5 HOH 558 857 857 HOH HOH B . K 5 HOH 559 858 858 HOH HOH B . K 5 HOH 560 859 859 HOH HOH B . K 5 HOH 561 860 860 HOH HOH B . K 5 HOH 562 861 861 HOH HOH B . K 5 HOH 563 862 862 HOH HOH B . K 5 HOH 564 863 863 HOH HOH B . K 5 HOH 565 864 864 HOH HOH B . K 5 HOH 566 865 865 HOH HOH B . K 5 HOH 567 866 866 HOH HOH B . K 5 HOH 568 867 867 HOH HOH B . K 5 HOH 569 868 868 HOH HOH B . K 5 HOH 570 869 869 HOH HOH B . K 5 HOH 571 870 870 HOH HOH B . K 5 HOH 572 871 871 HOH HOH B . K 5 HOH 573 872 872 HOH HOH B . K 5 HOH 574 873 873 HOH HOH B . K 5 HOH 575 874 874 HOH HOH B . K 5 HOH 576 875 875 HOH HOH B . K 5 HOH 577 876 876 HOH HOH B . K 5 HOH 578 877 877 HOH HOH B . K 5 HOH 579 878 878 HOH HOH B . K 5 HOH 580 879 879 HOH HOH B . K 5 HOH 581 880 880 HOH HOH B . K 5 HOH 582 881 881 HOH HOH B . K 5 HOH 583 882 882 HOH HOH B . K 5 HOH 584 883 883 HOH HOH B . K 5 HOH 585 884 884 HOH HOH B . K 5 HOH 586 885 885 HOH HOH B . K 5 HOH 587 886 886 HOH HOH B . K 5 HOH 588 887 887 HOH HOH B . K 5 HOH 589 888 888 HOH HOH B . K 5 HOH 590 889 889 HOH HOH B . K 5 HOH 591 890 890 HOH HOH B . K 5 HOH 592 891 891 HOH HOH B . K 5 HOH 593 892 892 HOH HOH B . K 5 HOH 594 893 893 HOH HOH B . K 5 HOH 595 894 894 HOH HOH B . K 5 HOH 596 895 895 HOH HOH B . K 5 HOH 597 896 896 HOH HOH B . K 5 HOH 598 897 897 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 CNS refinement . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # _cell.entry_id 4FEN _cell.length_a 133.689 _cell.length_b 35.347 _cell.length_c 41.388 _cell.angle_alpha 90.00 _cell.angle_beta 91.39 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4FEN _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4FEN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_percent_sol 45.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 303 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '25% PEG 3K, 200 mM ammonium acetate, 10 mM cobalt hexammine, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 303K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-06-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 4FEN _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 40 _reflns.d_resolution_high 1.35 _reflns.number_obs 40660 _reflns.number_all 42755 _reflns.percent_possible_obs 95.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.35 _reflns_shell.d_res_low 1.37 _reflns_shell.percent_possible_all 66.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4FEN _refine.ls_number_reflns_obs 39278 _refine.ls_number_reflns_all 42755 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40 _refine.ls_d_res_high 1.35 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.164 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.164 _refine.ls_R_factor_R_free 0.191 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 3938 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4FEN _refine_analyze.Luzzati_coordinate_error_obs 0.13 _refine_analyze.Luzzati_sigma_a_obs 0.10 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1423 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.number_atoms_solvent 598 _refine_hist.number_atoms_total 2084 _refine_hist.d_res_high 1.35 _refine_hist.d_res_low 40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_angle_deg 1.36 ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d 0.009 ? ? ? ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4FEN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4FEN _struct.title 'Crystal structure of the A24U/U25A/A46G mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4FEN _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'three-way junction with distal tertiary interaction, genetic regulatory element, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4FEN _struct_ref.pdbx_db_accession 4FEN _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4FEN _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 67 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4FEN _struct_ref_seq.db_align_beg 15 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 81 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 15 _struct_ref_seq.pdbx_auth_seq_align_end 81 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 67 N3 ? ? B G 15 B C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 67 O2 ? ? B G 15 B C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 67 N4 ? ? B G 15 B C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 66 N3 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 66 O2 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 66 N4 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 65 N3 ? ? B A 17 B U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 65 O4 ? ? B A 17 B U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 64 N1 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 64 O6 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 64 N2 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 63 N3 ? ? B A 19 B U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 63 O4 ? ? B A 19 B U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 62 N1 ? ? B U 20 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 62 N6 ? ? B U 20 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 61 N3 ? ? B A 21 B U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 61 O4 ? ? B A 21 B U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 8 O4 ? ? ? 1_555 A G 32 N1 ? ? B U 22 B G 46 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog19 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 38 N1 ? ? B U 22 B A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 38 N6 ? ? B U 22 B A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A A 9 N1 ? ? ? 1_555 A G 32 N2 ? ? B A 23 B G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog22 hydrog ? ? A A 9 N6 ? ? ? 1_555 A G 32 N3 ? ? B A 23 B G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog23 hydrog ? ? A A 11 N6 ? ? ? 1_555 A A 31 N3 ? ? B A 25 B A 45 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog24 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 30 N1 ? ? B C 26 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 30 O6 ? ? B C 26 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 30 N2 ? ? B C 26 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 29 N3 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 29 O2 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 29 N4 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 28 N1 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 28 O6 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 28 N2 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 27 N3 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 27 O2 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 27 N4 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 26 N1 ? ? B U 30 B A 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 26 N6 ? ? B U 30 B A 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 25 N3 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 25 O2 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 25 N4 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A A 19 N1 ? ? ? 1_555 A A 52 N6 ? ? B A 33 B A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog42 hydrog ? ? A A 19 N6 ? ? ? 1_555 A A 52 N7 ? ? B A 33 B A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog43 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 51 N7 ? ? B U 34 B A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog44 hydrog ? ? A U 20 O2 ? ? ? 1_555 A A 51 N6 ? ? B U 34 B A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog45 hydrog ? ? A A 21 N6 ? ? ? 1_555 A A 50 N1 ? ? B A 35 B A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog46 hydrog ? ? A A 21 N7 ? ? ? 1_555 A A 50 N6 ? ? B A 35 B A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog47 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 47 N3 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 47 O2 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 47 N4 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 46 N3 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 46 O2 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 46 N4 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 24 N2 ? ? ? 1_555 A A 52 N1 ? ? B G 38 B A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog54 hydrog ? ? A G 24 N3 ? ? ? 1_555 A A 52 N6 ? ? B G 38 B A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog55 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 39 N3 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 39 O2 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 39 N4 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A U 33 N3 ? ? ? 1_555 A U 37 O4 ? ? B U 47 B U 51 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog59 hydrog ? ? A U 35 N3 ? ? ? 1_555 A A 62 N3 ? ? B U 49 B A 76 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog60 hydrog ? ? A C 36 N4 ? ? ? 1_555 A U 61 O2 ? ? B C 50 B U 75 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog61 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 58 N1 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 58 O6 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 58 N2 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 41 N1 ? ? ? 1_555 A C 57 N3 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 57 O2 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 41 O6 ? ? ? 1_555 A C 57 N4 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 56 N3 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 56 O2 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 56 N4 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 43 N1 ? ? ? 1_555 A U 55 O2 ? ? B G 57 B U 69 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog71 hydrog ? ? A G 43 O6 ? ? ? 1_555 A U 55 N3 ? ? B G 57 B U 69 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog72 hydrog ? ? A C 44 N3 ? ? ? 1_555 A G 54 N1 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 44 N4 ? ? ? 1_555 A G 54 O6 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 44 O2 ? ? ? 1_555 A G 54 N2 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A A 45 N1 ? ? ? 1_555 A U 53 N3 ? ? B A 59 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A A 45 N6 ? ? ? 1_555 A U 53 O4 ? ? B A 59 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 47 O2 ? ? ? 1_555 A A 51 N6 ? ? B C 61 B A 65 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog78 hydrog ? ? A G 48 N2 ? ? ? 1_555 A U 49 O4 ? ? B G 62 B U 63 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B HPA 101 ? 9 'BINDING SITE FOR RESIDUE HPA B 101' AC2 Software B ACT 102 ? 9 'BINDING SITE FOR RESIDUE ACT B 102' AC3 Software B NCO 103 ? 10 'BINDING SITE FOR RESIDUE NCO B 103' AC4 Software B NCO 104 ? 12 'BINDING SITE FOR RESIDUE NCO B 104' AC5 Software B NCO 105 ? 12 'BINDING SITE FOR RESIDUE NCO B 105' AC6 Software B NCO 106 ? 10 'BINDING SITE FOR RESIDUE NCO B 106' AC7 Software B NCO 107 ? 11 'BINDING SITE FOR RESIDUE NCO B 107' AC8 Software B NCO 108 ? 7 'BINDING SITE FOR RESIDUE NCO B 108' AC9 Software B NCO 109 ? 11 'BINDING SITE FOR RESIDUE NCO B 109' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 A A 7 ? A B 21 . ? 1_555 ? 2 AC1 9 U A 8 ? U B 22 . ? 1_555 ? 3 AC1 9 U A 33 ? U B 47 . ? 1_555 ? 4 AC1 9 U A 37 ? U B 51 . ? 1_555 ? 5 AC1 9 A A 38 ? A B 52 . ? 1_555 ? 6 AC1 9 A A 59 ? A B 73 . ? 1_555 ? 7 AC1 9 C A 60 ? C B 74 . ? 1_555 ? 8 AC1 9 U A 61 ? U B 75 . ? 1_555 ? 9 AC1 9 HOH K . ? HOH B 312 . ? 1_555 ? 10 AC2 9 G A 18 ? G B 32 . ? 1_555 ? 11 AC2 9 A A 19 ? A B 33 . ? 1_555 ? 12 AC2 9 G A 24 ? G B 38 . ? 1_555 ? 13 AC2 9 C A 25 ? C B 39 . ? 1_555 ? 14 AC2 9 A A 52 ? A B 66 . ? 1_555 ? 15 AC2 9 U A 53 ? U B 67 . ? 1_555 ? 16 AC2 9 HOH K . ? HOH B 316 . ? 1_555 ? 17 AC2 9 HOH K . ? HOH B 660 . ? 1_555 ? 18 AC2 9 HOH K . ? HOH B 669 . ? 1_555 ? 19 AC3 10 G A 15 ? G B 29 . ? 4_545 ? 20 AC3 10 U A 16 ? U B 30 . ? 4_545 ? 21 AC3 10 A A 52 ? A B 66 . ? 1_555 ? 22 AC3 10 U A 53 ? U B 67 . ? 1_555 ? 23 AC3 10 HOH K . ? HOH B 320 . ? 1_555 ? 24 AC3 10 HOH K . ? HOH B 323 . ? 1_555 ? 25 AC3 10 HOH K . ? HOH B 349 . ? 1_555 ? 26 AC3 10 HOH K . ? HOH B 351 . ? 4_555 ? 27 AC3 10 HOH K . ? HOH B 462 . ? 1_555 ? 28 AC3 10 HOH K . ? HOH B 534 . ? 1_555 ? 29 AC4 12 C A 25 ? C B 39 . ? 1_555 ? 30 AC4 12 G A 41 ? G B 55 . ? 1_555 ? 31 AC4 12 G A 42 ? G B 56 . ? 1_555 ? 32 AC4 12 G A 43 ? G B 57 . ? 1_555 ? 33 AC4 12 G A 54 ? G B 68 . ? 1_555 ? 34 AC4 12 U A 55 ? U B 69 . ? 1_555 ? 35 AC4 12 HOH K . ? HOH B 306 . ? 1_555 ? 36 AC4 12 HOH K . ? HOH B 386 . ? 1_555 ? 37 AC4 12 HOH K . ? HOH B 391 . ? 1_555 ? 38 AC4 12 HOH K . ? HOH B 434 . ? 1_555 ? 39 AC4 12 HOH K . ? HOH B 444 . ? 1_555 ? 40 AC4 12 HOH K . ? HOH B 621 . ? 1_555 ? 41 AC5 12 G A 24 ? G B 38 . ? 1_555 ? 42 AC5 12 G A 42 ? G B 56 . ? 1_555 ? 43 AC5 12 G A 43 ? G B 57 . ? 4_556 ? 44 AC5 12 C A 44 ? C B 58 . ? 4_556 ? 45 AC5 12 HOH K . ? HOH B 400 . ? 1_555 ? 46 AC5 12 HOH K . ? HOH B 428 . ? 1_555 ? 47 AC5 12 HOH K . ? HOH B 500 . ? 1_555 ? 48 AC5 12 HOH K . ? HOH B 511 . ? 1_555 ? 49 AC5 12 HOH K . ? HOH B 529 . ? 4_546 ? 50 AC5 12 HOH K . ? HOH B 595 . ? 1_555 ? 51 AC5 12 HOH K . ? HOH B 715 . ? 1_555 ? 52 AC5 12 HOH K . ? HOH B 786 . ? 1_555 ? 53 AC6 10 U A 16 ? U B 30 . ? 1_555 ? 54 AC6 10 G A 17 ? G B 31 . ? 1_555 ? 55 AC6 10 G A 18 ? G B 32 . ? 1_555 ? 56 AC6 10 A A 51 ? A B 65 . ? 1_555 ? 57 AC6 10 A A 52 ? A B 66 . ? 1_555 ? 58 AC6 10 HOH K . ? HOH B 307 . ? 1_555 ? 59 AC6 10 HOH K . ? HOH B 309 . ? 1_555 ? 60 AC6 10 HOH K . ? HOH B 316 . ? 1_555 ? 61 AC6 10 HOH K . ? HOH B 327 . ? 1_555 ? 62 AC6 10 HOH K . ? HOH B 340 . ? 1_555 ? 63 AC7 11 G A 23 ? G B 37 . ? 1_555 ? 64 AC7 11 G A 24 ? G B 38 . ? 1_555 ? 65 AC7 11 G A 43 ? G B 57 . ? 1_555 ? 66 AC7 11 HOH K . ? HOH B 378 . ? 1_555 ? 67 AC7 11 HOH K . ? HOH B 479 . ? 1_555 ? 68 AC7 11 HOH K . ? HOH B 547 . ? 1_555 ? 69 AC7 11 HOH K . ? HOH B 637 . ? 1_555 ? 70 AC7 11 HOH K . ? HOH B 695 . ? 1_555 ? 71 AC7 11 HOH K . ? HOH B 719 . ? 1_555 ? 72 AC7 11 HOH K . ? HOH B 864 . ? 1_555 ? 73 AC7 11 HOH K . ? HOH B 878 . ? 4_546 ? 74 AC8 7 A A 31 ? A B 45 . ? 1_555 ? 75 AC8 7 G A 32 ? G B 46 . ? 1_555 ? 76 AC8 7 U A 33 ? U B 47 . ? 1_555 ? 77 AC8 7 HOH K . ? HOH B 429 . ? 1_555 ? 78 AC8 7 HOH K . ? HOH B 480 . ? 1_555 ? 79 AC8 7 HOH K . ? HOH B 537 . ? 1_555 ? 80 AC8 7 HOH K . ? HOH B 673 . ? 1_555 ? 81 AC9 11 U A 22 ? U B 36 . ? 4_546 ? 82 AC9 11 G A 28 ? G B 42 . ? 1_545 ? 83 AC9 11 C A 29 ? C B 43 . ? 1_545 ? 84 AC9 11 G A 58 ? G B 72 . ? 1_555 ? 85 AC9 11 A A 59 ? A B 73 . ? 1_555 ? 86 AC9 11 HOH K . ? HOH B 371 . ? 1_545 ? 87 AC9 11 HOH K . ? HOH B 533 . ? 1_555 ? 88 AC9 11 HOH K . ? HOH B 685 . ? 1_555 ? 89 AC9 11 HOH K . ? HOH B 760 . ? 1_555 ? 90 AC9 11 HOH K . ? HOH B 777 . ? 1_555 ? 91 AC9 11 HOH K . ? HOH B 820 . ? 1_555 ? # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id G _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 38 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.062 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 720 ? K HOH . 2 1 B HOH 775 ? K HOH . 3 1 B HOH 791 ? K HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ACT C C N N 38 ACT O O N N 39 ACT OXT O N N 40 ACT CH3 C N N 41 ACT H1 H N N 42 ACT H2 H N N 43 ACT H3 H N N 44 C OP3 O N N 45 C P P N N 46 C OP1 O N N 47 C OP2 O N N 48 C "O5'" O N N 49 C "C5'" C N N 50 C "C4'" C N R 51 C "O4'" O N N 52 C "C3'" C N S 53 C "O3'" O N N 54 C "C2'" C N R 55 C "O2'" O N N 56 C "C1'" C N R 57 C N1 N N N 58 C C2 C N N 59 C O2 O N N 60 C N3 N N N 61 C C4 C N N 62 C N4 N N N 63 C C5 C N N 64 C C6 C N N 65 C HOP3 H N N 66 C HOP2 H N N 67 C "H5'" H N N 68 C "H5''" H N N 69 C "H4'" H N N 70 C "H3'" H N N 71 C "HO3'" H N N 72 C "H2'" H N N 73 C "HO2'" H N N 74 C "H1'" H N N 75 C H41 H N N 76 C H42 H N N 77 C H5 H N N 78 C H6 H N N 79 G OP3 O N N 80 G P P N N 81 G OP1 O N N 82 G OP2 O N N 83 G "O5'" O N N 84 G "C5'" C N N 85 G "C4'" C N R 86 G "O4'" O N N 87 G "C3'" C N S 88 G "O3'" O N N 89 G "C2'" C N R 90 G "O2'" O N N 91 G "C1'" C N R 92 G N9 N Y N 93 G C8 C Y N 94 G N7 N Y N 95 G C5 C Y N 96 G C6 C N N 97 G O6 O N N 98 G N1 N N N 99 G C2 C N N 100 G N2 N N N 101 G N3 N N N 102 G C4 C Y N 103 G HOP3 H N N 104 G HOP2 H N N 105 G "H5'" H N N 106 G "H5''" H N N 107 G "H4'" H N N 108 G "H3'" H N N 109 G "HO3'" H N N 110 G "H2'" H N N 111 G "HO2'" H N N 112 G "H1'" H N N 113 G H8 H N N 114 G H1 H N N 115 G H21 H N N 116 G H22 H N N 117 HOH O O N N 118 HOH H1 H N N 119 HOH H2 H N N 120 HPA N1 N Y N 121 HPA C2 C Y N 122 HPA N3 N Y N 123 HPA C4 C Y N 124 HPA C5 C Y N 125 HPA C6 C Y N 126 HPA O6 O N N 127 HPA N7 N Y N 128 HPA C8 C Y N 129 HPA N9 N Y N 130 HPA HN1 H N N 131 HPA H2 H N N 132 HPA HN7 H N N 133 HPA H8 H N N 134 NCO CO CO N N 135 NCO N1 N N N 136 NCO N2 N N N 137 NCO N3 N N N 138 NCO N4 N N N 139 NCO N5 N N N 140 NCO N6 N N N 141 NCO HN11 H N N 142 NCO HN12 H N N 143 NCO HN13 H N N 144 NCO HN21 H N N 145 NCO HN22 H N N 146 NCO HN23 H N N 147 NCO HN31 H N N 148 NCO HN32 H N N 149 NCO HN33 H N N 150 NCO HN41 H N N 151 NCO HN42 H N N 152 NCO HN43 H N N 153 NCO HN51 H N N 154 NCO HN52 H N N 155 NCO HN53 H N N 156 NCO HN61 H N N 157 NCO HN62 H N N 158 NCO HN63 H N N 159 U OP3 O N N 160 U P P N N 161 U OP1 O N N 162 U OP2 O N N 163 U "O5'" O N N 164 U "C5'" C N N 165 U "C4'" C N R 166 U "O4'" O N N 167 U "C3'" C N S 168 U "O3'" O N N 169 U "C2'" C N R 170 U "O2'" O N N 171 U "C1'" C N R 172 U N1 N N N 173 U C2 C N N 174 U O2 O N N 175 U N3 N N N 176 U C4 C N N 177 U O4 O N N 178 U C5 C N N 179 U C6 C N N 180 U HOP3 H N N 181 U HOP2 H N N 182 U "H5'" H N N 183 U "H5''" H N N 184 U "H4'" H N N 185 U "H3'" H N N 186 U "HO3'" H N N 187 U "H2'" H N N 188 U "HO2'" H N N 189 U "H1'" H N N 190 U H3 H N N 191 U H5 H N N 192 U H6 H N N 193 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ACT C O doub N N 40 ACT C OXT sing N N 41 ACT C CH3 sing N N 42 ACT CH3 H1 sing N N 43 ACT CH3 H2 sing N N 44 ACT CH3 H3 sing N N 45 C OP3 P sing N N 46 C OP3 HOP3 sing N N 47 C P OP1 doub N N 48 C P OP2 sing N N 49 C P "O5'" sing N N 50 C OP2 HOP2 sing N N 51 C "O5'" "C5'" sing N N 52 C "C5'" "C4'" sing N N 53 C "C5'" "H5'" sing N N 54 C "C5'" "H5''" sing N N 55 C "C4'" "O4'" sing N N 56 C "C4'" "C3'" sing N N 57 C "C4'" "H4'" sing N N 58 C "O4'" "C1'" sing N N 59 C "C3'" "O3'" sing N N 60 C "C3'" "C2'" sing N N 61 C "C3'" "H3'" sing N N 62 C "O3'" "HO3'" sing N N 63 C "C2'" "O2'" sing N N 64 C "C2'" "C1'" sing N N 65 C "C2'" "H2'" sing N N 66 C "O2'" "HO2'" sing N N 67 C "C1'" N1 sing N N 68 C "C1'" "H1'" sing N N 69 C N1 C2 sing N N 70 C N1 C6 sing N N 71 C C2 O2 doub N N 72 C C2 N3 sing N N 73 C N3 C4 doub N N 74 C C4 N4 sing N N 75 C C4 C5 sing N N 76 C N4 H41 sing N N 77 C N4 H42 sing N N 78 C C5 C6 doub N N 79 C C5 H5 sing N N 80 C C6 H6 sing N N 81 G OP3 P sing N N 82 G OP3 HOP3 sing N N 83 G P OP1 doub N N 84 G P OP2 sing N N 85 G P "O5'" sing N N 86 G OP2 HOP2 sing N N 87 G "O5'" "C5'" sing N N 88 G "C5'" "C4'" sing N N 89 G "C5'" "H5'" sing N N 90 G "C5'" "H5''" sing N N 91 G "C4'" "O4'" sing N N 92 G "C4'" "C3'" sing N N 93 G "C4'" "H4'" sing N N 94 G "O4'" "C1'" sing N N 95 G "C3'" "O3'" sing N N 96 G "C3'" "C2'" sing N N 97 G "C3'" "H3'" sing N N 98 G "O3'" "HO3'" sing N N 99 G "C2'" "O2'" sing N N 100 G "C2'" "C1'" sing N N 101 G "C2'" "H2'" sing N N 102 G "O2'" "HO2'" sing N N 103 G "C1'" N9 sing N N 104 G "C1'" "H1'" sing N N 105 G N9 C8 sing Y N 106 G N9 C4 sing Y N 107 G C8 N7 doub Y N 108 G C8 H8 sing N N 109 G N7 C5 sing Y N 110 G C5 C6 sing N N 111 G C5 C4 doub Y N 112 G C6 O6 doub N N 113 G C6 N1 sing N N 114 G N1 C2 sing N N 115 G N1 H1 sing N N 116 G C2 N2 sing N N 117 G C2 N3 doub N N 118 G N2 H21 sing N N 119 G N2 H22 sing N N 120 G N3 C4 sing N N 121 HOH O H1 sing N N 122 HOH O H2 sing N N 123 HPA N1 C2 sing Y N 124 HPA N1 C6 sing Y N 125 HPA N1 HN1 sing N N 126 HPA C2 N3 doub Y N 127 HPA C2 H2 sing N N 128 HPA N3 C4 sing Y N 129 HPA C4 C5 doub Y N 130 HPA C4 N9 sing Y N 131 HPA C5 C6 sing Y N 132 HPA C5 N7 sing Y N 133 HPA C6 O6 doub N N 134 HPA N7 C8 sing Y N 135 HPA N7 HN7 sing N N 136 HPA C8 N9 doub Y N 137 HPA C8 H8 sing N N 138 NCO CO N1 sing N N 139 NCO CO N2 sing N N 140 NCO CO N3 sing N N 141 NCO CO N4 sing N N 142 NCO CO N5 sing N N 143 NCO CO N6 sing N N 144 NCO N1 HN11 sing N N 145 NCO N1 HN12 sing N N 146 NCO N1 HN13 sing N N 147 NCO N2 HN21 sing N N 148 NCO N2 HN22 sing N N 149 NCO N2 HN23 sing N N 150 NCO N3 HN31 sing N N 151 NCO N3 HN32 sing N N 152 NCO N3 HN33 sing N N 153 NCO N4 HN41 sing N N 154 NCO N4 HN42 sing N N 155 NCO N4 HN43 sing N N 156 NCO N5 HN51 sing N N 157 NCO N5 HN52 sing N N 158 NCO N5 HN53 sing N N 159 NCO N6 HN61 sing N N 160 NCO N6 HN62 sing N N 161 NCO N6 HN63 sing N N 162 U OP3 P sing N N 163 U OP3 HOP3 sing N N 164 U P OP1 doub N N 165 U P OP2 sing N N 166 U P "O5'" sing N N 167 U OP2 HOP2 sing N N 168 U "O5'" "C5'" sing N N 169 U "C5'" "C4'" sing N N 170 U "C5'" "H5'" sing N N 171 U "C5'" "H5''" sing N N 172 U "C4'" "O4'" sing N N 173 U "C4'" "C3'" sing N N 174 U "C4'" "H4'" sing N N 175 U "O4'" "C1'" sing N N 176 U "C3'" "O3'" sing N N 177 U "C3'" "C2'" sing N N 178 U "C3'" "H3'" sing N N 179 U "O3'" "HO3'" sing N N 180 U "C2'" "O2'" sing N N 181 U "C2'" "C1'" sing N N 182 U "C2'" "H2'" sing N N 183 U "O2'" "HO2'" sing N N 184 U "C1'" N1 sing N N 185 U "C1'" "H1'" sing N N 186 U N1 C2 sing N N 187 U N1 C6 sing N N 188 U C2 O2 doub N N 189 U C2 N3 sing N N 190 U N3 C4 sing N N 191 U N3 H3 sing N N 192 U C4 O4 doub N N 193 U C4 C5 sing N N 194 U C5 C6 doub N N 195 U C5 H5 sing N N 196 U C6 H6 sing N N 197 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4FEN 'double helix' 4FEN 'a-form double helix' 4FEN 'mismatched base pair' 4FEN 'internal loop' 4FEN 'triple helix' 4FEN 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 67 1_555 -1.418 0.031 -0.238 -10.829 -14.108 -4.802 1 B_G15:C81_B B 15 ? B 81 ? ? ? 1 A G 2 1_555 A C 66 1_555 -0.748 -0.458 -0.242 -1.608 -15.977 2.497 2 B_G16:C80_B B 16 ? B 80 ? 19 1 1 A A 3 1_555 A U 65 1_555 0.051 -0.109 -0.037 -1.358 -17.054 -0.258 3 B_A17:U79_B B 17 ? B 79 ? 20 1 1 A C 4 1_555 A G 64 1_555 0.048 -0.175 0.172 -1.379 -15.321 2.732 4 B_C18:G78_B B 18 ? B 78 ? 19 1 1 A A 5 1_555 A U 63 1_555 -0.047 -0.020 -0.083 -6.700 -14.365 6.153 5 B_A19:U77_B B 19 ? B 77 ? 20 1 1 A U 6 1_555 A A 62 1_555 0.080 -0.193 0.137 -9.718 -16.998 4.364 6 B_U20:A76_B B 20 ? B 76 ? 20 1 1 A A 7 1_555 A U 61 1_555 -0.002 -0.150 0.117 -1.867 -14.865 2.202 7 B_A21:U75_B B 21 ? B 75 ? 20 1 1 A U 37 1_555 A U 33 1_555 -3.548 -0.647 0.981 -33.134 43.438 -70.048 8 B_U51:U47_B B 51 ? B 47 ? ? ? 1 A A 38 1_555 A U 8 1_555 0.166 -0.029 -0.327 -19.746 -2.137 1.057 9 B_A52:U22_B B 52 ? B 22 ? 20 1 1 A C 39 1_555 A G 32 1_555 -0.010 -0.122 -0.101 6.496 5.793 -2.034 10 B_C53:G46_B B 53 ? B 46 ? 19 1 1 A A 11 1_555 A A 31 1_555 -6.526 -4.159 -0.238 12.367 -9.033 -11.606 11 B_A25:A45_B B 25 ? B 45 ? ? 6 1 A C 12 1_555 A G 30 1_555 0.108 -0.181 -0.314 8.294 -18.627 1.150 12 B_C26:G44_B B 26 ? B 44 ? 19 1 1 A G 13 1_555 A C 29 1_555 -0.163 -0.093 -0.181 -9.690 -4.860 -0.226 13 B_G27:C43_B B 27 ? B 43 ? 19 1 1 A C 14 1_555 A G 28 1_555 0.006 -0.087 -0.010 1.187 -3.026 0.049 14 B_C28:G42_B B 28 ? B 42 ? 19 1 1 A G 15 1_555 A C 27 1_555 -0.251 -0.162 0.127 1.482 -13.144 -0.514 15 B_G29:C41_B B 29 ? B 41 ? 19 1 1 A U 16 1_555 A A 26 1_555 -0.091 -0.100 -0.019 3.820 -6.348 3.556 16 B_U30:A40_B B 30 ? B 40 ? 20 1 1 A G 17 1_555 A C 25 1_555 -0.223 -0.189 0.081 3.422 -7.354 -0.367 17 B_G31:C39_B B 31 ? B 39 ? 19 1 1 A C 40 1_555 A G 58 1_555 0.211 -0.163 0.221 -9.922 -13.913 -0.189 18 B_C54:G72_B B 54 ? B 72 ? 19 1 1 A G 41 1_555 A C 57 1_555 -0.140 -0.139 0.170 -3.420 -8.480 -2.484 19 B_G55:C71_B B 55 ? B 71 ? 19 1 1 A G 42 1_555 A C 56 1_555 -0.263 -0.191 0.104 1.468 -15.040 -2.503 20 B_G56:C70_B B 56 ? B 70 ? 19 1 1 A G 43 1_555 A U 55 1_555 -2.245 -0.618 0.040 1.237 -16.783 -2.647 21 B_G57:U69_B B 57 ? B 69 ? 28 1 1 A C 44 1_555 A G 54 1_555 0.144 -0.140 -0.085 6.094 -15.531 0.186 22 B_C58:G68_B B 58 ? B 68 ? 19 1 1 A A 45 1_555 A U 53 1_555 0.153 -0.060 -0.107 -2.324 -8.332 0.337 23 B_A59:U67_B B 59 ? B 67 ? 20 1 1 A C 46 1_555 A G 24 1_555 0.045 -0.120 0.330 -14.556 -14.224 -0.830 24 B_C60:G38_B B 60 ? B 38 ? 19 1 1 A C 47 1_555 A G 23 1_555 0.146 -0.176 0.383 -0.466 -11.000 -3.352 25 B_C61:G37_B B 61 ? B 37 ? 19 1 1 A A 50 1_555 A A 21 1_555 4.179 1.379 0.200 3.766 3.594 -110.630 26 B_A64:A35_B B 64 ? B 35 ? 5 4 1 A G 48 1_555 A U 49 1_555 7.919 1.862 0.515 0.028 7.380 17.087 27 B_G62:U63_B B 62 ? B 63 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 67 1_555 A G 2 1_555 A C 66 1_555 0.403 -1.174 3.084 -5.425 12.649 37.624 -2.999 -1.139 2.499 18.858 8.087 39.976 1 BB_G15G16:C80C81_BB B 15 ? B 81 ? B 16 ? B 80 ? 1 A G 2 1_555 A C 66 1_555 A A 3 1_555 A U 65 1_555 -0.164 -0.831 3.193 -3.060 7.151 36.759 -2.183 -0.127 2.989 11.186 4.787 37.546 2 BB_G16A17:U79C80_BB B 16 ? B 80 ? B 17 ? B 79 ? 1 A A 3 1_555 A U 65 1_555 A C 4 1_555 A G 64 1_555 0.703 -1.757 3.205 0.308 5.399 30.674 -4.237 -1.255 2.869 10.108 -0.577 31.136 3 BB_A17C18:G78U79_BB B 17 ? B 79 ? B 18 ? B 78 ? 1 A C 4 1_555 A G 64 1_555 A A 5 1_555 A U 63 1_555 0.102 -1.646 3.279 3.529 12.234 31.490 -4.622 0.345 2.483 21.475 -6.195 33.906 4 BB_C18A19:U77G78_BB B 18 ? B 78 ? B 19 ? B 77 ? 1 A A 5 1_555 A U 63 1_555 A U 6 1_555 A A 62 1_555 -0.242 -0.999 3.339 -2.031 14.433 30.379 -3.994 0.100 2.620 25.762 3.626 33.620 5 BB_A19U20:A76U77_BB B 19 ? B 77 ? B 20 ? B 76 ? 1 A U 6 1_555 A A 62 1_555 A A 7 1_555 A U 61 1_555 0.427 -1.340 2.950 1.613 17.723 28.532 -4.644 -0.528 1.847 32.296 -2.938 33.529 6 BB_U20A21:U75A76_BB B 20 ? B 76 ? B 21 ? B 75 ? 1 A A 7 1_555 A U 61 1_555 A U 37 1_555 A U 33 1_555 -1.806 6.201 2.138 15.028 3.104 158.648 3.148 0.945 2.124 1.579 -7.645 158.841 7 BB_A21U51:U47U75_BB B 21 ? B 75 ? B 51 ? B 47 ? 1 A U 37 1_555 A U 33 1_555 A A 38 1_555 A U 8 1_555 -0.018 -0.956 3.371 -0.727 26.872 5.576 -7.366 -0.107 -0.244 78.468 2.123 27.444 8 BB_U51A52:U22U47_BB B 51 ? B 47 ? B 52 ? B 22 ? 1 A A 38 1_555 A U 8 1_555 A C 39 1_555 A G 32 1_555 2.040 -0.156 2.720 -2.017 10.635 43.141 -1.008 -2.851 2.521 14.197 2.693 44.416 9 BB_A52C53:G46U22_BB B 52 ? B 22 ? B 53 ? B 46 ? 1 A C 39 1_555 A G 32 1_555 A A 11 1_555 A A 31 1_555 -2.318 -2.253 2.985 -12.196 -5.500 18.082 -3.303 0.451 4.204 -15.103 33.489 22.460 10 BB_C53A25:A45G46_BB B 53 ? B 46 ? B 25 ? B 45 ? 1 A A 11 1_555 A A 31 1_555 A C 12 1_555 A G 30 1_555 0.950 -1.369 3.577 -4.221 8.406 67.152 -1.570 -1.024 3.348 7.562 3.796 67.731 11 BB_A25C26:G44A45_BB B 25 ? B 45 ? B 26 ? B 44 ? 1 A C 12 1_555 A G 30 1_555 A G 13 1_555 A C 29 1_555 -0.533 -2.189 3.705 -0.733 12.059 28.469 -6.464 0.858 2.597 23.242 1.413 30.877 12 BB_C26G27:C43G44_BB B 26 ? B 44 ? B 27 ? B 43 ? 1 A G 13 1_555 A C 29 1_555 A C 14 1_555 A G 28 1_555 0.791 -2.501 3.043 0.714 1.957 24.985 -6.286 -1.632 2.863 4.513 -1.646 25.070 13 BB_G27C28:G42C43_BB B 27 ? B 43 ? B 28 ? B 42 ? 1 A C 14 1_555 A G 28 1_555 A G 15 1_555 A C 27 1_555 -0.646 -1.990 3.114 -0.981 8.105 28.270 -5.437 1.090 2.480 16.172 1.957 29.402 14 BB_C28G29:C41G42_BB B 28 ? B 42 ? B 29 ? B 41 ? 1 A G 15 1_555 A C 27 1_555 A U 16 1_555 A A 26 1_555 0.008 -1.284 3.200 0.158 10.796 31.850 -3.845 0.010 2.637 19.003 -0.279 33.585 15 BB_G29U30:A40C41_BB B 29 ? B 41 ? B 30 ? B 40 ? 1 A U 16 1_555 A A 26 1_555 A G 17 1_555 A C 25 1_555 0.696 -1.762 3.282 -0.788 3.157 31.659 -3.776 -1.409 3.079 5.767 1.440 31.821 16 BB_U30G31:C39A40_BB B 30 ? B 40 ? B 31 ? B 39 ? 1 A C 40 1_555 A G 58 1_555 A G 41 1_555 A C 57 1_555 -1.015 -1.686 3.002 0.142 9.268 30.645 -4.475 1.865 2.398 17.054 -0.262 31.984 17 BB_C54G55:C71G72_BB B 54 ? B 72 ? B 55 ? B 71 ? 1 A G 41 1_555 A C 57 1_555 A G 42 1_555 A C 56 1_555 0.034 -0.584 3.197 0.459 8.647 31.461 -2.478 0.016 2.938 15.580 -0.828 32.602 18 BB_G55G56:C70C71_BB B 55 ? B 71 ? B 56 ? B 70 ? 1 A G 42 1_555 A C 56 1_555 A G 43 1_555 A U 55 1_555 0.091 -1.442 3.082 -3.202 8.972 26.391 -4.823 -0.846 2.442 18.887 6.739 28.029 19 BB_G56G57:U69C70_BB B 56 ? B 70 ? B 57 ? B 69 ? 1 A G 43 1_555 A U 55 1_555 A C 44 1_555 A G 54 1_555 0.427 -0.969 3.132 0.586 2.271 43.783 -1.503 -0.519 3.086 3.043 -0.785 43.843 20 BB_G57C58:G68U69_BB B 57 ? B 69 ? B 58 ? B 68 ? 1 A C 44 1_555 A G 54 1_555 A A 45 1_555 A U 53 1_555 0.471 -1.640 3.502 0.117 5.286 33.463 -3.694 -0.788 3.214 9.110 -0.202 33.866 21 BB_C58A59:U67G68_BB B 58 ? B 68 ? B 59 ? B 67 ? 1 A A 45 1_555 A U 53 1_555 A C 46 1_555 A G 24 1_555 2.075 -0.587 3.239 5.414 9.482 54.607 -1.184 -1.907 3.279 10.221 -5.836 55.606 22 BB_A59C60:G38U67_BB B 59 ? B 67 ? B 60 ? B 38 ? 1 A C 46 1_555 A G 24 1_555 A C 47 1_555 A G 23 1_555 -0.603 -0.573 3.070 -1.041 5.355 28.617 -2.224 0.989 2.935 10.711 2.083 29.121 23 BB_C60C61:G37G38_BB B 60 ? B 38 ? B 61 ? B 37 ? 1 A C 47 1_555 A G 23 1_555 A A 50 1_555 A A 21 1_555 3.353 1.531 4.542 70.042 -160.611 -179.899 -0.764 1.677 4.543 80.306 35.021 -179.996 24 BB_C61A64:A35G37_BB B 61 ? B 37 ? B 64 ? B 35 ? 1 A A 50 1_555 A A 21 1_555 A G 48 1_555 A U 49 1_555 -2.832 -2.824 3.541 23.086 -170.347 102.115 -0.046 1.603 4.275 -86.063 -11.664 174.914 25 BB_A64G62:U63A35_BB B 64 ? B 35 ? B 62 ? B 63 ? # _atom_sites.entry_id 4FEN _atom_sites.fract_transf_matrix[1][1] 0.007480 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000182 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028291 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024169 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P # loop_