HEADER TRANSFERASE 07-JUN-12 4FHX TITLE CRYSTAL STRUCTURES OF THE CID1 POLY (U) POLYMERASE REVEAL THE TITLE 2 MECHANISM FOR UTP SELECTIVITY - H336N MUTANT BOUND TO MGATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(A) RNA POLYMERASE PROTEIN CID1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 33-377; COMPND 5 SYNONYM: CAFFEINE-INDUCED DEATH PROTEIN 1; COMPND 6 EC: 2.7.7.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 284812; SOURCE 5 STRAIN: 972 / ATCC 24843; SOURCE 6 GENE: CID1, SPAC19D5.03; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL-21(DE3)RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS NUCLEOTIDYLTRANSFERASE, POLY(U) POLYMERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.M.LUNDE,I.MAGLER,A.MEINHART REVDAT 3 13-SEP-23 4FHX 1 REMARK SEQADV LINK REVDAT 2 07-NOV-12 4FHX 1 JRNL REVDAT 1 29-AUG-12 4FHX 0 JRNL AUTH B.M.LUNDE,I.MAGLER,A.MEINHART JRNL TITL CRYSTAL STRUCTURES OF THE CID1 POLY (U) POLYMERASE REVEAL JRNL TITL 2 THE MECHANISM FOR UTP SELECTIVITY. JRNL REF NUCLEIC ACIDS RES. V. 40 9815 2012 JRNL REFN ISSN 0305-1048 JRNL PMID 22885303 JRNL DOI 10.1093/NAR/GKS740 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 10149 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 524 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 721 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 39 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.54000 REMARK 3 B22 (A**2) : 3.31000 REMARK 3 B33 (A**2) : 0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.396 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.287 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.372 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2720 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3668 ; 1.183 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 321 ; 5.585 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;38.548 ;23.226 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 482 ;16.664 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;19.910 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 397 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2026 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1611 ; 0.481 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2600 ; 0.958 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1109 ; 1.567 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1068 ; 2.446 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 134 REMARK 3 ORIGIN FOR THE GROUP (A): -15.9726 -4.6112 1.1025 REMARK 3 T TENSOR REMARK 3 T11: 0.1163 T22: 0.0722 REMARK 3 T33: 0.1423 T12: -0.0043 REMARK 3 T13: -0.0510 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 3.5711 L22: 0.6429 REMARK 3 L33: 3.0057 L12: 0.1229 REMARK 3 L13: -2.7216 L23: -0.0808 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: 0.0360 S13: -0.1801 REMARK 3 S21: 0.0547 S22: -0.0627 S23: 0.0296 REMARK 3 S31: 0.1243 S32: -0.1532 S33: 0.0743 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 135 A 377 REMARK 3 ORIGIN FOR THE GROUP (A): -12.2886 5.3182 -15.5654 REMARK 3 T TENSOR REMARK 3 T11: 0.1781 T22: 0.1391 REMARK 3 T33: 0.1546 T12: 0.0071 REMARK 3 T13: -0.0084 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.4348 L22: 0.8494 REMARK 3 L33: 1.0350 L12: 0.1844 REMARK 3 L13: -0.2108 L23: -0.1268 REMARK 3 S TENSOR REMARK 3 S11: -0.0318 S12: 0.0150 S13: -0.0316 REMARK 3 S21: 0.0272 S22: 0.0152 S23: 0.0335 REMARK 3 S31: -0.0428 S32: -0.0613 S33: 0.0165 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4FHX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072922. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SAGITALLY REMARK 200 FOCUSING SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10674 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.240 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 4FH3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM CHES, PH 9.5, 5-10% W/V REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.86000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.91300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.23500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.91300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.86000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.23500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 29 REMARK 465 SER A 30 REMARK 465 HIS A 31 REMARK 465 MET A 32 REMARK 465 SER A 33 REMARK 465 TYR A 34 REMARK 465 GLN A 35 REMARK 465 LYS A 36 REMARK 465 VAL A 37 REMARK 465 PRO A 38 REMARK 465 ASN A 39 REMARK 465 SER A 308 REMARK 465 ALA A 309 REMARK 465 THR A 310 REMARK 465 GLU A 311 REMARK 465 HIS A 312 REMARK 465 THR A 313 REMARK 465 GLY A 314 REMARK 465 SER A 315 REMARK 465 ALA A 316 REMARK 465 ASP A 317 REMARK 465 GLN A 318 REMARK 465 ILE A 319 REMARK 465 ILE A 320 REMARK 465 LYS A 321 REMARK 465 ASP A 322 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 503 O HOH A 531 4455 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 41 5.37 85.74 REMARK 500 ALA A 138 -103.16 58.94 REMARK 500 LYS A 150 -56.73 -136.85 REMARK 500 SER A 156 63.08 -117.38 REMARK 500 CYS A 159 112.89 -163.36 REMARK 500 THR A 208 -151.13 -114.13 REMARK 500 TRP A 306 60.15 -115.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 101 OD1 REMARK 620 2 ASP A 103 OD2 88.1 REMARK 620 3 ATP A 401 O2A 145.5 113.8 REMARK 620 4 ATP A 401 O2B 137.1 77.9 75.8 REMARK 620 5 ATP A 401 O3G 95.0 134.4 88.0 69.1 REMARK 620 6 HOH A 539 O 85.4 83.1 72.1 131.6 142.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4FH3 RELATED DB: PDB REMARK 900 RELATED ID: 4FH5 RELATED DB: PDB REMARK 900 RELATED ID: 4FHP RELATED DB: PDB REMARK 900 RELATED ID: 4FHV RELATED DB: PDB REMARK 900 RELATED ID: 4FHW RELATED DB: PDB REMARK 900 RELATED ID: 4FHY RELATED DB: PDB DBREF 4FHX A 33 377 UNP O13833 CID1_SCHPO 33 377 SEQADV 4FHX GLY A 29 UNP O13833 EXPRESSION TAG SEQADV 4FHX SER A 30 UNP O13833 EXPRESSION TAG SEQADV 4FHX HIS A 31 UNP O13833 EXPRESSION TAG SEQADV 4FHX MET A 32 UNP O13833 EXPRESSION TAG SEQADV 4FHX ASN A 336 UNP O13833 HIS 336 ENGINEERED MUTATION SEQRES 1 A 349 GLY SER HIS MET SER TYR GLN LYS VAL PRO ASN SER HIS SEQRES 2 A 349 LYS GLU PHE THR LYS PHE CYS TYR GLU VAL TYR ASN GLU SEQRES 3 A 349 ILE LYS ILE SER ASP LYS GLU PHE LYS GLU LYS ARG ALA SEQRES 4 A 349 ALA LEU ASP THR LEU ARG LEU CYS LEU LYS ARG ILE SER SEQRES 5 A 349 PRO ASP ALA GLU LEU VAL ALA PHE GLY SER LEU GLU SER SEQRES 6 A 349 GLY LEU ALA LEU LYS ASN SER ASP MET ASP LEU CYS VAL SEQRES 7 A 349 LEU MET ASP SER ARG VAL GLN SER ASP THR ILE ALA LEU SEQRES 8 A 349 GLN PHE TYR GLU GLU LEU ILE ALA GLU GLY PHE GLU GLY SEQRES 9 A 349 LYS PHE LEU GLN ARG ALA ARG ILE PRO ILE ILE LYS LEU SEQRES 10 A 349 THR SER ASP THR LYS ASN GLY PHE GLY ALA SER PHE GLN SEQRES 11 A 349 CYS ASP ILE GLY PHE ASN ASN ARG LEU ALA ILE HIS ASN SEQRES 12 A 349 THR LEU LEU LEU SER SER TYR THR LYS LEU ASP ALA ARG SEQRES 13 A 349 LEU LYS PRO MET VAL LEU LEU VAL LYS HIS TRP ALA LYS SEQRES 14 A 349 ARG LYS GLN ILE ASN SER PRO TYR PHE GLY THR LEU SER SEQRES 15 A 349 SER TYR GLY TYR VAL LEU MET VAL LEU TYR TYR LEU ILE SEQRES 16 A 349 HIS VAL ILE LYS PRO PRO VAL PHE PRO ASN LEU LEU LEU SEQRES 17 A 349 SER PRO LEU LYS GLN GLU LYS ILE VAL ASP GLY PHE ASP SEQRES 18 A 349 VAL GLY PHE ASP ASP LYS LEU GLU ASP ILE PRO PRO SER SEQRES 19 A 349 GLN ASN TYR SER SER LEU GLY SER LEU LEU HIS GLY PHE SEQRES 20 A 349 PHE ARG PHE TYR ALA TYR LYS PHE GLU PRO ARG GLU LYS SEQRES 21 A 349 VAL VAL THR PHE ARG ARG PRO ASP GLY TYR LEU THR LYS SEQRES 22 A 349 GLN GLU LYS GLY TRP THR SER ALA THR GLU HIS THR GLY SEQRES 23 A 349 SER ALA ASP GLN ILE ILE LYS ASP ARG TYR ILE LEU ALA SEQRES 24 A 349 ILE GLU ASP PRO PHE GLU ILE SER ASN ASN VAL GLY ARG SEQRES 25 A 349 THR VAL SER SER SER GLY LEU TYR ARG ILE ARG GLY GLU SEQRES 26 A 349 PHE MET ALA ALA SER ARG LEU LEU ASN SER ARG SER TYR SEQRES 27 A 349 PRO ILE PRO TYR ASP SER LEU PHE GLU GLU ALA HET ATP A 401 31 HET MG A 402 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 MG MG 2+ FORMUL 4 HOH *39(H2 O) HELIX 1 1 HIS A 41 LYS A 56 1 16 HELIX 2 2 SER A 58 ARG A 78 1 21 HELIX 3 3 GLY A 89 GLY A 94 1 6 HELIX 4 4 GLN A 113 GLU A 128 1 16 HELIX 5 5 ASN A 165 ASP A 182 1 18 HELIX 6 6 ARG A 184 LYS A 199 1 16 HELIX 7 7 SER A 203 GLY A 207 5 5 HELIX 8 8 SER A 210 VAL A 225 1 16 HELIX 9 9 ASN A 233 SER A 237 5 5 HELIX 10 10 LYS A 255 ILE A 259 5 5 HELIX 11 11 SER A 267 LYS A 282 1 16 HELIX 12 12 THR A 300 GLY A 305 1 6 HELIX 13 13 ASN A 337 VAL A 342 5 6 HELIX 14 14 SER A 343 ASN A 362 1 20 HELIX 15 15 PRO A 369 GLU A 375 5 7 SHEET 1 A 5 GLU A 84 PHE A 88 0 SHEET 2 A 5 MET A 102 LEU A 107 -1 O CYS A 105 N VAL A 86 SHEET 3 A 5 CYS A 159 PHE A 163 1 O ASP A 160 N LEU A 104 SHEET 4 A 5 ILE A 140 ASP A 148 -1 N ILE A 143 O ILE A 161 SHEET 5 A 5 PHE A 130 ARG A 137 -1 N LEU A 135 O ILE A 142 SHEET 1 B 2 ILE A 244 VAL A 245 0 SHEET 2 B 2 PHE A 248 ASP A 249 -1 O PHE A 248 N VAL A 245 LINK OD1 ASP A 101 MG MG A 402 1555 1555 2.28 LINK OD2 ASP A 103 MG MG A 402 1555 1555 2.28 LINK O2A ATP A 401 MG MG A 402 1555 1555 2.12 LINK O2B ATP A 401 MG MG A 402 1555 1555 2.21 LINK O3G ATP A 401 MG MG A 402 1555 1555 2.21 LINK MG MG A 402 O HOH A 539 1555 1555 2.21 CISPEP 1 LYS A 227 PRO A 228 0 -1.61 CISPEP 2 TYR A 366 PRO A 367 0 1.25 SITE 1 AC1 17 PHE A 88 GLY A 89 SER A 90 ASP A 101 SITE 2 AC1 17 ASP A 103 ALA A 168 ASN A 171 THR A 172 SITE 3 AC1 17 LYS A 193 SER A 211 ASN A 336 VAL A 338 SITE 4 AC1 17 ARG A 340 MG A 402 HOH A 506 HOH A 507 SITE 5 AC1 17 HOH A 539 SITE 1 AC2 4 ASP A 101 ASP A 103 ATP A 401 HOH A 539 CRYST1 53.720 62.470 111.826 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018615 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016008 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008942 0.00000