HEADER TRANSFERASE 07-JUN-12 4FHY TITLE CRYSTAL STRUCTURES OF THE CID1 POLY (U) POLYMERASE REVEAL THE TITLE 2 MECHANISM FOR UTP SELECTIVITY - MG 3'-DATP BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(A) RNA POLYMERASE PROTEIN CID1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 33-377; COMPND 5 SYNONYM: CAFFEINE-INDUCED DEATH PROTEIN 1; COMPND 6 EC: 2.7.7.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 284812; SOURCE 5 STRAIN: 972 / ATCC 24843; SOURCE 6 GENE: CID1, SPAC19D5.03; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL-21(DE3)RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS NUCLEOTIDYLTRANSFERASE, POLY(U) POLYMERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.M.LUNDE,I.MAGLER,A.MEINHART REVDAT 3 13-SEP-23 4FHY 1 REMARK SEQADV LINK REVDAT 2 07-NOV-12 4FHY 1 JRNL REVDAT 1 29-AUG-12 4FHY 0 JRNL AUTH B.M.LUNDE,I.MAGLER,A.MEINHART JRNL TITL CRYSTAL STRUCTURES OF THE CID1 POLY (U) POLYMERASE REVEAL JRNL TITL 2 THE MECHANISM FOR UTP SELECTIVITY. JRNL REF NUCLEIC ACIDS RES. V. 40 9815 2012 JRNL REFN ISSN 0305-1048 JRNL PMID 22885303 JRNL DOI 10.1093/NAR/GKS740 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 10204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 527 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 729 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2586 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.82000 REMARK 3 B22 (A**2) : 2.04000 REMARK 3 B33 (A**2) : -1.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.378 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.293 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.661 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.881 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2683 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3619 ; 1.222 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 315 ; 5.476 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 122 ;36.804 ;23.115 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 476 ;16.776 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;14.396 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 396 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1993 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1586 ; 0.451 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2563 ; 0.877 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1097 ; 1.343 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1056 ; 2.201 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 137 REMARK 3 ORIGIN FOR THE GROUP (A): -16.2431 -4.0229 1.1058 REMARK 3 T TENSOR REMARK 3 T11: 0.0660 T22: 0.0315 REMARK 3 T33: 0.0413 T12: 0.0023 REMARK 3 T13: -0.0332 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 3.3844 L22: 0.8884 REMARK 3 L33: 2.1857 L12: 0.0428 REMARK 3 L13: -2.1661 L23: 0.1358 REMARK 3 S TENSOR REMARK 3 S11: -0.0672 S12: -0.0376 S13: -0.0982 REMARK 3 S21: 0.0876 S22: -0.0309 S23: -0.0018 REMARK 3 S31: 0.1452 S32: -0.0620 S33: 0.0981 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 138 A 377 REMARK 3 ORIGIN FOR THE GROUP (A): -11.9898 5.5302 -16.3805 REMARK 3 T TENSOR REMARK 3 T11: 0.0716 T22: 0.0891 REMARK 3 T33: 0.0655 T12: 0.0032 REMARK 3 T13: -0.0121 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.3208 L22: 1.0607 REMARK 3 L33: 1.0411 L12: 0.3272 REMARK 3 L13: -0.3085 L23: -0.1950 REMARK 3 S TENSOR REMARK 3 S11: -0.0536 S12: 0.0014 S13: -0.0190 REMARK 3 S21: -0.0015 S22: 0.0479 S23: -0.0259 REMARK 3 S31: -0.0261 S32: -0.0522 S33: 0.0057 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4FHY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072923. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9718 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SAGITALLY REMARK 200 FOCUSING SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10732 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 41.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.280 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 4FH3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM CHES, PH 9.5, 5-10% W/V REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.84000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.60500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.26000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.60500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.84000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.26000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 29 REMARK 465 SER A 30 REMARK 465 HIS A 31 REMARK 465 MET A 32 REMARK 465 SER A 33 REMARK 465 TYR A 34 REMARK 465 GLN A 35 REMARK 465 LYS A 36 REMARK 465 VAL A 37 REMARK 465 PRO A 38 REMARK 465 ASN A 39 REMARK 465 LYS A 150 REMARK 465 ASN A 151 REMARK 465 GLY A 152 REMARK 465 PHE A 153 REMARK 465 GLY A 154 REMARK 465 SER A 308 REMARK 465 ALA A 309 REMARK 465 THR A 310 REMARK 465 GLU A 311 REMARK 465 HIS A 312 REMARK 465 THR A 313 REMARK 465 GLY A 314 REMARK 465 SER A 315 REMARK 465 ALA A 316 REMARK 465 ASP A 317 REMARK 465 GLN A 318 REMARK 465 ILE A 319 REMARK 465 ILE A 320 REMARK 465 LYS A 321 REMARK 465 ASP A 322 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 80 109.06 -163.62 REMARK 500 ALA A 138 -102.07 65.66 REMARK 500 ASP A 148 80.81 -163.05 REMARK 500 THR A 208 -155.47 -105.79 REMARK 500 VAL A 225 -67.37 -104.04 REMARK 500 TRP A 306 63.06 -117.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 101 OD1 REMARK 620 2 ASP A 103 OD2 110.9 REMARK 620 3 3AT A 401 O2B 143.5 100.9 REMARK 620 4 3AT A 401 O3G 90.3 152.9 54.5 REMARK 620 5 3AT A 401 O2A 114.9 109.6 68.1 73.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3AT A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4FH3 RELATED DB: PDB REMARK 900 RELATED ID: 4FH5 RELATED DB: PDB REMARK 900 RELATED ID: 4FHP RELATED DB: PDB REMARK 900 RELATED ID: 4FHV RELATED DB: PDB REMARK 900 RELATED ID: 4FHW RELATED DB: PDB REMARK 900 RELATED ID: 4FHX RELATED DB: PDB DBREF 4FHY A 33 377 UNP O13833 CID1_SCHPO 33 377 SEQADV 4FHY GLY A 29 UNP O13833 EXPRESSION TAG SEQADV 4FHY SER A 30 UNP O13833 EXPRESSION TAG SEQADV 4FHY HIS A 31 UNP O13833 EXPRESSION TAG SEQADV 4FHY MET A 32 UNP O13833 EXPRESSION TAG SEQRES 1 A 349 GLY SER HIS MET SER TYR GLN LYS VAL PRO ASN SER HIS SEQRES 2 A 349 LYS GLU PHE THR LYS PHE CYS TYR GLU VAL TYR ASN GLU SEQRES 3 A 349 ILE LYS ILE SER ASP LYS GLU PHE LYS GLU LYS ARG ALA SEQRES 4 A 349 ALA LEU ASP THR LEU ARG LEU CYS LEU LYS ARG ILE SER SEQRES 5 A 349 PRO ASP ALA GLU LEU VAL ALA PHE GLY SER LEU GLU SER SEQRES 6 A 349 GLY LEU ALA LEU LYS ASN SER ASP MET ASP LEU CYS VAL SEQRES 7 A 349 LEU MET ASP SER ARG VAL GLN SER ASP THR ILE ALA LEU SEQRES 8 A 349 GLN PHE TYR GLU GLU LEU ILE ALA GLU GLY PHE GLU GLY SEQRES 9 A 349 LYS PHE LEU GLN ARG ALA ARG ILE PRO ILE ILE LYS LEU SEQRES 10 A 349 THR SER ASP THR LYS ASN GLY PHE GLY ALA SER PHE GLN SEQRES 11 A 349 CYS ASP ILE GLY PHE ASN ASN ARG LEU ALA ILE HIS ASN SEQRES 12 A 349 THR LEU LEU LEU SER SER TYR THR LYS LEU ASP ALA ARG SEQRES 13 A 349 LEU LYS PRO MET VAL LEU LEU VAL LYS HIS TRP ALA LYS SEQRES 14 A 349 ARG LYS GLN ILE ASN SER PRO TYR PHE GLY THR LEU SER SEQRES 15 A 349 SER TYR GLY TYR VAL LEU MET VAL LEU TYR TYR LEU ILE SEQRES 16 A 349 HIS VAL ILE LYS PRO PRO VAL PHE PRO ASN LEU LEU LEU SEQRES 17 A 349 SER PRO LEU LYS GLN GLU LYS ILE VAL ASP GLY PHE ASP SEQRES 18 A 349 VAL GLY PHE ASP ASP LYS LEU GLU ASP ILE PRO PRO SER SEQRES 19 A 349 GLN ASN TYR SER SER LEU GLY SER LEU LEU HIS GLY PHE SEQRES 20 A 349 PHE ARG PHE TYR ALA TYR LYS PHE GLU PRO ARG GLU LYS SEQRES 21 A 349 VAL VAL THR PHE ARG ARG PRO ASP GLY TYR LEU THR LYS SEQRES 22 A 349 GLN GLU LYS GLY TRP THR SER ALA THR GLU HIS THR GLY SEQRES 23 A 349 SER ALA ASP GLN ILE ILE LYS ASP ARG TYR ILE LEU ALA SEQRES 24 A 349 ILE GLU ASP PRO PHE GLU ILE SER HIS ASN VAL GLY ARG SEQRES 25 A 349 THR VAL SER SER SER GLY LEU TYR ARG ILE ARG GLY GLU SEQRES 26 A 349 PHE MET ALA ALA SER ARG LEU LEU ASN SER ARG SER TYR SEQRES 27 A 349 PRO ILE PRO TYR ASP SER LEU PHE GLU GLU ALA HET 3AT A 401 30 HET MG A 402 1 HETNAM 3AT 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETSYN 3AT CORDYCEPIN TRIPHOSPHATE FORMUL 2 3AT C10 H16 N5 O12 P3 FORMUL 3 MG MG 2+ FORMUL 4 HOH *44(H2 O) HELIX 1 1 HIS A 41 LYS A 56 1 16 HELIX 2 2 SER A 58 SER A 80 1 23 HELIX 3 3 GLY A 89 GLY A 94 1 6 HELIX 4 4 GLN A 113 GLU A 128 1 16 HELIX 5 5 ASN A 165 ASP A 182 1 18 HELIX 6 6 ARG A 184 LYS A 199 1 16 HELIX 7 7 SER A 203 GLY A 207 5 5 HELIX 8 8 SER A 210 VAL A 225 1 16 HELIX 9 9 LYS A 255 ILE A 259 5 5 HELIX 10 10 SER A 267 LYS A 282 1 16 HELIX 11 11 THR A 300 GLY A 305 1 6 HELIX 12 12 SER A 343 SER A 363 1 21 HELIX 13 13 PRO A 369 GLU A 375 5 7 SHEET 1 A 5 GLU A 84 PHE A 88 0 SHEET 2 A 5 MET A 102 LEU A 107 -1 O LEU A 107 N GLU A 84 SHEET 3 A 5 CYS A 159 PHE A 163 1 O ASP A 160 N LEU A 104 SHEET 4 A 5 ILE A 140 ASP A 148 -1 N LEU A 145 O CYS A 159 SHEET 5 A 5 PHE A 130 ARG A 137 -1 N GLU A 131 O THR A 146 SHEET 1 B 2 ILE A 244 VAL A 245 0 SHEET 2 B 2 PHE A 248 ASP A 249 -1 O PHE A 248 N VAL A 245 LINK OD1 ASP A 101 MG MG A 402 1555 1555 2.27 LINK OD2 ASP A 103 MG MG A 402 1555 1555 2.28 LINK O2B 3AT A 401 MG MG A 402 1555 1555 2.20 LINK O3G 3AT A 401 MG MG A 402 1555 1555 2.21 LINK O2A 3AT A 401 MG MG A 402 1555 1555 2.21 CISPEP 1 LYS A 227 PRO A 228 0 -4.24 CISPEP 2 TYR A 366 PRO A 367 0 -0.42 SITE 1 AC1 12 SER A 90 ASP A 101 ASP A 103 ALA A 168 SITE 2 AC1 12 ASN A 171 LYS A 193 LYS A 197 SER A 211 SITE 3 AC1 12 TYR A 212 HIS A 336 MG A 402 HOH A 528 SITE 1 AC2 3 ASP A 101 ASP A 103 3AT A 401 CRYST1 53.680 62.520 111.210 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018629 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015995 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008992 0.00000