HEADER HYDROLASE 13-JUN-12 4FK9 TITLE HIGH RESOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF MANNANASE TITLE 2 SACTE_2347 FROM STREPTOMYCES SP. SIREXAA-E COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULOSE-BINDING FAMILY II; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. SIREXAA-E; SOURCE 3 ORGANISM_TAXID: 862751; SOURCE 4 GENE: 2347, SACTE_2347; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PVP67K KEYWDS GH5 TIM BARREL, GLYCOSIDE HYDROLASE, BETA-MANNANASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.F.ACHESON,T.E.TAKASUKA,B.G.FOX REVDAT 4 28-FEB-24 4FK9 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4FK9 1 REMARK REVDAT 2 16-SEP-15 4FK9 1 JRNL REVDAT 1 26-JUN-13 4FK9 0 JRNL AUTH T.E.TAKASUKA,J.F.ACHESON,C.M.BIANCHETTI,B.M.PROM, JRNL AUTH 2 L.F.BERGEMAN,A.J.BOOK,C.R.CURRIE,B.G.FOX JRNL TITL BIOCHEMICAL PROPERTIES AND ATOMIC RESOLUTION STRUCTURE OF A JRNL TITL 2 PROTEOLYTICALLY PROCESSED BETA-MANNANASE FROM CELLULOLYTIC JRNL TITL 3 STREPTOMYCES SP. SIREXAA-E. JRNL REF PLOS ONE V. 9 94166 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24710170 JRNL DOI 10.1371/JOURNAL.PONE.0094166 REMARK 2 REMARK 2 RESOLUTION. 1.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1061 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 130004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.119 REMARK 3 R VALUE (WORKING SET) : 0.119 REMARK 3 FREE R VALUE : 0.132 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.540 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7868 - 2.5540 0.92 9075 142 0.1428 0.1436 REMARK 3 2 2.5540 - 2.0272 0.98 9296 145 0.1209 0.1254 REMARK 3 3 2.0272 - 1.7710 0.99 9336 146 0.1145 0.1458 REMARK 3 4 1.7710 - 1.6090 0.99 9288 145 0.1087 0.1174 REMARK 3 5 1.6090 - 1.4937 0.99 9287 145 0.0993 0.1026 REMARK 3 6 1.4937 - 1.4056 0.99 9238 145 0.0943 0.1128 REMARK 3 7 1.4056 - 1.3352 0.99 9139 142 0.0984 0.1147 REMARK 3 8 1.3352 - 1.2771 0.98 9171 143 0.1010 0.1088 REMARK 3 9 1.2771 - 1.2279 0.98 9078 142 0.1034 0.1291 REMARK 3 10 1.2279 - 1.1856 0.98 9086 143 0.1036 0.1299 REMARK 3 11 1.1856 - 1.1485 0.98 9101 142 0.1033 0.1527 REMARK 3 12 1.1485 - 1.1157 0.98 9061 141 0.1075 0.1344 REMARK 3 13 1.1157 - 1.0863 0.98 9027 141 0.1244 0.1466 REMARK 3 14 1.0863 - 1.0598 0.95 8821 138 0.1580 0.1753 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.060 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 10.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2527 REMARK 3 ANGLE : 1.232 3464 REMARK 3 CHIRALITY : 0.068 373 REMARK 3 PLANARITY : 0.006 462 REMARK 3 DIHEDRAL : 11.860 870 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FK9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073003. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 130004 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.060 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.31500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 31.40250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.18000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.40250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.18000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -113.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 602 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 795 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 907 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 31 REMARK 465 GLY A 32 REMARK 465 HIS A 33 REMARK 465 HIS A 34 REMARK 465 GLY A 349 REMARK 465 GLY A 350 REMARK 465 GLY A 351 REMARK 465 GLN A 352 REMARK 465 GLY A 353 REMARK 465 GLY A 354 REMARK 465 GLY A 355 REMARK 465 ASP A 356 REMARK 465 THR A 357 REMARK 465 GLU A 358 REMARK 465 ALA A 359 REMARK 465 PRO A 360 REMARK 465 THR A 361 REMARK 465 ALA A 362 REMARK 465 PRO A 363 REMARK 465 GLY A 364 REMARK 465 THR A 365 REMARK 465 PRO A 366 REMARK 465 THR A 367 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 35 CG ND1 CD2 CE1 NE2 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLU A 44 REMARK 475 ASN A 45 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 707 O HOH A 996 1.64 REMARK 500 O HOH A 821 O HOH A 986 1.64 REMARK 500 O HOH A 657 O HOH A 852 1.76 REMARK 500 O HOH A 926 O HOH A 992 1.78 REMARK 500 O HOH A 852 O HOH A 987 1.80 REMARK 500 O HOH A 985 O HOH A 998 1.87 REMARK 500 O HOH A 821 O HOH A 996 1.89 REMARK 500 O HOH A 784 O HOH A 988 1.89 REMARK 500 O HOH A 643 O HOH A 981 1.89 REMARK 500 NH1 ARG A 228 O HOH A 977 1.90 REMARK 500 O HOH A 962 O HOH A 993 1.91 REMARK 500 O HOH A 707 O HOH A 987 1.92 REMARK 500 O HOH A 633 O HOH A 808 1.92 REMARK 500 O HOH A 700 O HOH A 711 1.98 REMARK 500 O HOH A 728 O HOH A 1000 1.98 REMARK 500 O HOH A 957 O HOH A 1006 1.99 REMARK 500 O HOH A 760 O HOH A 853 1.99 REMARK 500 O HOH A 709 O HOH A 856 1.99 REMARK 500 O HOH A 811 O HOH A 1001 2.00 REMARK 500 O HOH A 728 O HOH A 808 2.02 REMARK 500 O HOH A 628 O HOH A 990 2.03 REMARK 500 O HOH A 932 O HOH A 1007 2.04 REMARK 500 O HOH A 771 O HOH A 853 2.05 REMARK 500 O HOH A 834 O HOH A 873 2.07 REMARK 500 O HOH A 670 O HOH A 843 2.08 REMARK 500 O HIS A 36 O HOH A 855 2.09 REMARK 500 O HOH A 858 O HOH A 895 2.10 REMARK 500 O HOH A 743 O HOH A 872 2.11 REMARK 500 O HOH A 679 O HOH A 739 2.14 REMARK 500 O HOH A 778 O HOH A 806 2.15 REMARK 500 O HOH A 804 O HOH A 843 2.16 REMARK 500 O HOH A 851 O HOH A 853 2.16 REMARK 500 OD1 ASP A 257 O HOH A 879 2.16 REMARK 500 O HOH A 610 O HOH A 843 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 983 O HOH A 995 3454 1.56 REMARK 500 O HOH A 984 O HOH A 995 3454 1.78 REMARK 500 O HOH A 933 O HOH A 980 1554 1.82 REMARK 500 O HOH A 664 O HOH A 989 4554 1.82 REMARK 500 O HOH A 855 O HOH A 990 3444 1.83 REMARK 500 O HOH A 668 O HOH A 991 1554 1.87 REMARK 500 O HOH A 668 O HOH A 988 1554 1.88 REMARK 500 O HOH A 855 O HOH A 984 3444 2.05 REMARK 500 O HOH A 770 O HOH A 853 2455 2.07 REMARK 500 O HOH A 904 O HOH A 904 2455 2.15 REMARK 500 O HOH A 853 O HOH A 899 2455 2.16 REMARK 500 OD1 ASP A 336 O HOH A 853 2455 2.17 REMARK 500 OE1 GLU A 329 O HOH A 825 1556 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 109 -161.25 -103.73 REMARK 500 GLU A 143 -52.04 -123.94 REMARK 500 GLU A 178 60.64 33.40 REMARK 500 TYR A 246 -138.23 -117.77 REMARK 500 TYR A 249 67.51 -101.19 REMARK 500 ASP A 279 -167.98 -121.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 276 O REMARK 620 2 ASP A 283 OD1 88.4 REMARK 620 3 PRO A 284 O 97.6 90.6 REMARK 620 4 GLU A 286 OE1 93.1 171.9 81.3 REMARK 620 5 HOH A 579 O 174.9 89.3 86.9 89.8 REMARK 620 6 HOH A 619 O 89.1 99.6 167.9 88.4 86.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 572 O REMARK 620 2 HOH A 606 O 172.3 REMARK 620 3 HOH A 657 O 90.2 93.4 REMARK 620 4 HOH A 707 O 104.6 68.4 140.0 REMARK 620 5 HOH A 821 O 93.7 89.3 128.6 88.0 REMARK 620 6 HOH A 852 O 89.2 88.1 49.1 93.5 176.4 REMARK 620 7 HOH A 986 O 87.2 99.8 86.1 130.8 43.1 135.0 REMARK 620 8 HOH A 987 O 84.7 88.2 94.9 51.1 136.5 45.9 171.9 REMARK 620 9 HOH A 996 O 79.4 97.2 169.3 47.4 50.2 132.7 90.5 87.1 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 700 O REMARK 620 2 HOH A 706 O 89.3 REMARK 620 3 HOH A 841 O 175.7 92.1 REMARK 620 4 HOH A 847 O 94.3 170.8 85.0 REMARK 620 5 HOH A 848 O 89.7 95.0 86.1 93.5 REMARK 620 6 HOH A 849 O 94.6 76.7 89.7 94.5 170.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 407 DBREF 4FK9 A 51 367 UNP G2NHM6 G2NHM6_9ACTO 51 367 SEQADV 4FK9 MET A 31 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 GLY A 32 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 HIS A 33 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 HIS A 34 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 HIS A 35 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 HIS A 36 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 HIS A 37 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 HIS A 38 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 HIS A 39 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 HIS A 40 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 ALA A 41 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 ILE A 42 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 ALA A 43 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 GLU A 44 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 ASN A 45 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 LEU A 46 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 TYR A 47 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 PHE A 48 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 GLN A 49 UNP G2NHM6 EXPRESSION TAG SEQADV 4FK9 SER A 50 UNP G2NHM6 EXPRESSION TAG SEQRES 1 A 337 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS ALA ILE ALA SEQRES 2 A 337 GLU ASN LEU TYR PHE GLN SER ALA ALA GLY LEU HIS ILE SEQRES 3 A 337 SER ASP GLY ARG LEU VAL GLU GLY ASN GLY ASN ASP PHE SEQRES 4 A 337 VAL MET ARG GLY ILE ASN HIS ALA HIS THR TRP TYR PRO SEQRES 5 A 337 GLY GLU THR GLN SER LEU ALA ASP ILE LYS ALA THR GLY SEQRES 6 A 337 ALA ASN THR VAL ARG VAL VAL LEU SER ASP GLY TYR ARG SEQRES 7 A 337 TRP SER GLU ASN SER PRO GLU ASP VAL ALA SER ILE ILE SEQRES 8 A 337 ALA ARG CYS LYS ALA GLU ARG LEU ILE CYS VAL LEU GLU SEQRES 9 A 337 VAL HIS ASP THR THR GLY TYR GLY GLU ASP ALA ALA ALA SEQRES 10 A 337 GLY THR LEU ASP HIS ALA ALA ASP TYR TRP ILE GLY LEU SEQRES 11 A 337 LYS ASP VAL LEU ASP GLY GLU GLU ASP TYR VAL VAL ILE SEQRES 12 A 337 ASN ILE GLY ASN GLU PRO TRP GLY ASN ALA ASP PRO ALA SEQRES 13 A 337 GLY TRP THR ALA PRO THR THR ALA ALA ILE GLN LYS LEU SEQRES 14 A 337 ARG ALA ALA GLY PHE ALA HIS THR ILE MET VAL ASP ALA SEQRES 15 A 337 PRO ASN TRP GLY GLN ASP TRP GLU GLY VAL MET ARG ALA SEQRES 16 A 337 ASP ALA ARG SER VAL TYR ASP ALA ASP PRO THR GLY ASN SEQRES 17 A 337 LEU ILE PHE SER ILE HIS MET TYR SER VAL TYR ASP THR SEQRES 18 A 337 ALA ALA LYS VAL THR ASP TYR LEU ASN ALA PHE VAL ASP SEQRES 19 A 337 ALA GLY LEU PRO LEU LEU ILE GLY GLU PHE GLY GLY PRO SEQRES 20 A 337 ALA ASP GLN TYR GLY ASP PRO ASP GLU ASP THR MET MET SEQRES 21 A 337 ALA THR ALA GLU GLU LEU GLY LEU GLY TYR LEU ALA TRP SEQRES 22 A 337 SER TRP SER GLY ASN THR ASP PRO VAL LEU ASP LEU VAL SEQRES 23 A 337 LEU ASP PHE ASP PRO THR ARG LEU SER SER TRP GLY GLU SEQRES 24 A 337 ARG VAL LEU HIS GLY PRO ASP GLY ILE THR GLU THR SER SEQRES 25 A 337 ARG GLU ALA THR VAL PHE GLY GLY GLY GLN GLY GLY GLY SEQRES 26 A 337 ASP THR GLU ALA PRO THR ALA PRO GLY THR PRO THR HET MG A 401 1 HET MG A 402 1 HET MG A 403 1 HET CL A 404 1 HET MG A 405 1 HET CL A 406 1 HET MG A 407 1 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 2 MG 5(MG 2+) FORMUL 5 CL 2(CL 1-) FORMUL 9 HOH *507(H2 O) HELIX 1 1 ALA A 77 TYR A 81 5 5 HELIX 2 2 GLN A 86 THR A 94 1 9 HELIX 3 3 SER A 113 GLU A 127 1 15 HELIX 4 4 ASP A 137 THR A 139 5 3 HELIX 5 5 THR A 149 LEU A 160 1 12 HELIX 6 6 LEU A 160 ASP A 165 1 6 HELIX 7 7 ASP A 184 GLY A 187 5 4 HELIX 8 8 TRP A 188 ALA A 202 1 15 HELIX 9 9 GLY A 221 ALA A 233 1 13 HELIX 10 10 THR A 251 ALA A 265 1 15 HELIX 11 11 ASP A 285 GLY A 297 1 13 HELIX 12 12 ASP A 310 ASP A 314 5 5 HELIX 13 13 VAL A 316 ASP A 320 5 5 HELIX 14 14 SER A 325 GLY A 334 1 10 HELIX 15 15 GLY A 337 SER A 342 1 6 SHEET 1 A 2 HIS A 55 SER A 57 0 SHEET 2 A 2 ARG A 60 VAL A 62 -1 O VAL A 62 N HIS A 55 SHEET 1 B 9 ARG A 72 HIS A 76 0 SHEET 2 B 9 THR A 98 LEU A 103 1 O ARG A 100 N HIS A 76 SHEET 3 B 9 ILE A 130 VAL A 135 1 O VAL A 132 N VAL A 101 SHEET 4 B 9 VAL A 171 ASN A 174 1 O ASN A 174 N LEU A 133 SHEET 5 B 9 ILE A 208 ASP A 211 1 O MET A 209 N ILE A 173 SHEET 6 B 9 LEU A 239 MET A 245 1 O SER A 242 N VAL A 210 SHEET 7 B 9 LEU A 269 PHE A 274 1 O LEU A 270 N ILE A 243 SHEET 8 B 9 GLY A 299 ALA A 302 1 O GLY A 299 N ILE A 271 SHEET 9 B 9 ARG A 72 HIS A 76 1 N ASN A 75 O ALA A 302 LINK O GLY A 276 MG MG A 401 1555 1555 2.07 LINK OD1 ASP A 283 MG MG A 401 1555 1555 2.03 LINK O PRO A 284 MG MG A 401 1555 1555 2.08 LINK OE1 GLU A 286 MG MG A 401 1555 1555 2.15 LINK MG MG A 401 O HOH A 579 1555 1555 2.13 LINK MG MG A 401 O HOH A 619 1555 1555 2.07 LINK MG MG A 402 O HOH A 572 1555 1555 2.10 LINK MG MG A 402 O HOH A 606 1555 1555 2.00 LINK MG MG A 402 O HOH A 657 1555 1555 2.01 LINK MG MG A 402 O HOH A 707 1555 1555 1.99 LINK MG MG A 402 O HOH A 821 1555 1555 2.33 LINK MG MG A 402 O HOH A 852 1555 1555 2.21 LINK MG MG A 402 O HOH A 986 1555 1555 2.09 LINK MG MG A 402 O HOH A 987 1555 1555 2.39 LINK MG MG A 402 O HOH A 996 1555 1555 2.08 LINK MG MG A 403 O HOH A 700 1555 1555 2.01 LINK MG MG A 403 O HOH A 706 1555 1555 2.06 LINK MG MG A 403 O HOH A 841 1555 1555 2.13 LINK MG MG A 403 O HOH A 847 1555 1555 2.11 LINK MG MG A 403 O HOH A 848 1555 1555 2.07 LINK MG MG A 403 O HOH A 849 1555 1555 2.17 LINK MG MG A 407 O HOH A 786 1555 1555 2.99 CISPEP 1 TRP A 303 SER A 304 0 -7.94 SITE 1 AC1 6 GLY A 276 ASP A 283 PRO A 284 GLU A 286 SITE 2 AC1 6 HOH A 579 HOH A 619 SITE 1 AC2 9 HOH A 572 HOH A 606 HOH A 657 HOH A 707 SITE 2 AC2 9 HOH A 821 HOH A 852 HOH A 986 HOH A 987 SITE 3 AC2 9 HOH A 996 SITE 1 AC3 6 HOH A 700 HOH A 706 HOH A 841 HOH A 847 SITE 2 AC3 6 HOH A 848 HOH A 849 SITE 1 AC4 3 THR A 251 HOH A 730 HOH A 874 SITE 1 AC5 4 HIS A 36 HIS A 38 HIS A 136 HOH A 597 SITE 1 AC6 4 TYR A 81 GLY A 83 HOH A 772 HOH A 962 SITE 1 AC7 3 THR A 85 ARG A 123 HOH A 786 CRYST1 62.805 102.360 45.346 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015922 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022053 0.00000