HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-JUN-12 4FM3 TITLE CRYSTAL STRUCTURE OF A DUF4398 FAMILY PROTEIN (PA2901) FROM TITLE 2 PSEUDOMONAS AERUGINOSA PAO1 AT 2.47 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: PA2901; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF14346 FAMILY PROTEIN, DUF4398, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4FM3 1 REMARK SEQADV LINK REVDAT 4 24-JAN-18 4FM3 1 JRNL REVDAT 3 15-NOV-17 4FM3 1 REMARK REVDAT 2 24-DEC-14 4FM3 1 TITLE REVDAT 1 15-AUG-12 4FM3 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (PA2901) FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA PAO1 AT 2.47 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 16041 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 805 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.47 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.64 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.37 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2717 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2209 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2570 REMARK 3 BIN R VALUE (WORKING SET) : 0.2189 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.41 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 147 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2867 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.60570 REMARK 3 B22 (A**2) : -5.55090 REMARK 3 B33 (A**2) : 13.15660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.62670 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.344 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.884 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2934 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3944 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1466 ; 8.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 100 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 405 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2934 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 388 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3352 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.73 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.04 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|0 - 116 } REMARK 3 ORIGIN FOR THE GROUP (A): 29.2291 -9.9904 53.5874 REMARK 3 T TENSOR REMARK 3 T11: -0.0630 T22: -0.1173 REMARK 3 T33: -0.0007 T12: 0.0809 REMARK 3 T13: 0.0202 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.7274 L22: 1.5399 REMARK 3 L33: 6.7610 L12: -0.0094 REMARK 3 L13: 0.3279 L23: -2.2356 REMARK 3 S TENSOR REMARK 3 S11: 0.0558 S12: -0.0373 S13: -0.0950 REMARK 3 S21: 0.0510 S22: -0.1406 S23: -0.1396 REMARK 3 S31: 0.6079 S32: 0.5710 S33: 0.0849 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|0 - 116 } REMARK 3 ORIGIN FOR THE GROUP (A): 20.4046 14.2879 23.9464 REMARK 3 T TENSOR REMARK 3 T11: -0.0475 T22: -0.1390 REMARK 3 T33: -0.0124 T12: -0.0264 REMARK 3 T13: 0.0541 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 2.4696 L22: 0.8474 REMARK 3 L33: 3.8756 L12: -0.5801 REMARK 3 L13: 1.7910 L23: -0.7518 REMARK 3 S TENSOR REMARK 3 S11: -0.1422 S12: 0.4161 S13: 0.4240 REMARK 3 S21: -0.1938 S22: -0.1835 S23: -0.1303 REMARK 3 S31: -0.2804 S32: 0.1863 S33: 0.3256 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|24 - 119 } REMARK 3 ORIGIN FOR THE GROUP (A): 27.7372 11.6031 53.9562 REMARK 3 T TENSOR REMARK 3 T11: -0.0002 T22: -0.1265 REMARK 3 T33: -0.0141 T12: -0.0033 REMARK 3 T13: 0.0566 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.6096 L22: 0.7492 REMARK 3 L33: 3.9295 L12: 0.1470 REMARK 3 L13: 0.9448 L23: 0.5014 REMARK 3 S TENSOR REMARK 3 S11: -0.0980 S12: 0.0363 S13: 0.0693 REMARK 3 S21: 0.0993 S22: 0.0217 S23: 0.0066 REMARK 3 S31: -0.4629 S32: 0.2428 S33: 0.0763 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|24 - 119 } REMARK 3 ORIGIN FOR THE GROUP (A): 19.3555 -6.9982 24.6928 REMARK 3 T TENSOR REMARK 3 T11: -0.0441 T22: -0.1395 REMARK 3 T33: -0.0490 T12: -0.0120 REMARK 3 T13: -0.0264 T23: -0.0157 REMARK 3 L TENSOR REMARK 3 L11: 0.8923 L22: 1.1326 REMARK 3 L33: 6.3860 L12: -0.1482 REMARK 3 L13: 1.6760 L23: 0.0639 REMARK 3 S TENSOR REMARK 3 S11: 0.2122 S12: 0.2483 S13: -0.1593 REMARK 3 S21: -0.3278 S22: -0.0607 S23: 0.1323 REMARK 3 S31: 0.6055 S32: 0.2973 S33: -0.1515 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR REMARK 3 RESTRAINT REPRESENTATION (-AUTONCS). 5. SULFATE (SO4) AND REMARK 3 POLYETHYLENE GLYCOL (PG4) FROM THE CRYSTALLIZATION WERE MODELED REMARK 3 INTO THE STRUCTURE. REMARK 4 REMARK 4 4FM3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073069. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97922,0.91162,0.97901 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE DECEMBER 29, 2011 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16044 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.470 REMARK 200 RESOLUTION RANGE LOW (A) : 44.141 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 40.0% REMARK 280 POLYETHYLENE GLYCOL 400, 0.1M TRIS PH 8.5, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 55.34500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.37000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 55.34500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.37000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER REMARK 300 AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -152.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 117 REMARK 465 THR A 118 REMARK 465 ASP A 119 REMARK 465 GLU B 117 REMARK 465 THR B 118 REMARK 465 ASP B 119 REMARK 465 GLY C 0 REMARK 465 ASP C 23 REMARK 465 GLY D 0 REMARK 465 ASP D 23 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 53 CD CE NZ REMARK 470 LYS A 72 CD CE NZ REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 GLU A 103 CG CD OE1 OE2 REMARK 470 GLU B 38 CG CD OE1 OE2 REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 THR B 67 OG1 CG2 REMARK 470 LYS B 72 CG CD CE NZ REMARK 470 ARG C 31 CD NE CZ NH1 NH2 REMARK 470 LYS C 72 CG CD CE NZ REMARK 470 LYS C 106 CG CD CE NZ REMARK 470 LYS C 109 CG CD CE NZ REMARK 470 LYS C 113 CE NZ REMARK 470 GLU D 28 CG CD OE1 OE2 REMARK 470 ARG D 31 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 53 CG CD CE NZ REMARK 470 GLU D 69 CG CD OE1 OE2 REMARK 470 LYS D 72 CG CD CE NZ REMARK 470 LYS D 73 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ASP C 48 O ASP D 48 4556 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 70 75.11 -100.75 REMARK 500 SER B 70 76.88 -100.87 REMARK 500 SER C 70 78.11 -100.55 REMARK 500 SER D 70 77.13 -100.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417371 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 23-119) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4FM3 A 23 119 UNP Q9HZU6 Q9HZU6_PSEAE 23 119 DBREF 4FM3 B 23 119 UNP Q9HZU6 Q9HZU6_PSEAE 23 119 DBREF 4FM3 C 23 119 UNP Q9HZU6 Q9HZU6_PSEAE 23 119 DBREF 4FM3 D 23 119 UNP Q9HZU6 Q9HZU6_PSEAE 23 119 SEQADV 4FM3 GLY A 0 UNP Q9HZU6 EXPRESSION TAG SEQADV 4FM3 GLY B 0 UNP Q9HZU6 EXPRESSION TAG SEQADV 4FM3 GLY C 0 UNP Q9HZU6 EXPRESSION TAG SEQADV 4FM3 GLY D 0 UNP Q9HZU6 EXPRESSION TAG SEQRES 1 A 98 GLY ASP PRO ALA PRO LEU GLU GLN MSE ARG LEU THR GLU SEQRES 2 A 98 GLN ALA LEU GLU GLN ALA LYS ALA VAL GLY ALA THR ASP SEQRES 3 A 98 ASP VAL ALA GLU LEU LYS LEU ALA GLN ASP LYS TYR ALA SEQRES 4 A 98 ALA ALA GLN ILE ALA MSE THR ALA GLU SER TYR LYS LYS SEQRES 5 A 98 ALA ARG LEU LEU ALA GLU GLN ALA GLU LEU ASP ALA ARG SEQRES 6 A 98 LEU ALA GLU SER LYS VAL LEU THR GLN LYS SER LYS ASP SEQRES 7 A 98 GLN LEU GLY GLU LEU ASP LYS SER LEU LYS ARG LEU ARG SEQRES 8 A 98 LYS GLN LEU GLY GLU THR ASP SEQRES 1 B 98 GLY ASP PRO ALA PRO LEU GLU GLN MSE ARG LEU THR GLU SEQRES 2 B 98 GLN ALA LEU GLU GLN ALA LYS ALA VAL GLY ALA THR ASP SEQRES 3 B 98 ASP VAL ALA GLU LEU LYS LEU ALA GLN ASP LYS TYR ALA SEQRES 4 B 98 ALA ALA GLN ILE ALA MSE THR ALA GLU SER TYR LYS LYS SEQRES 5 B 98 ALA ARG LEU LEU ALA GLU GLN ALA GLU LEU ASP ALA ARG SEQRES 6 B 98 LEU ALA GLU SER LYS VAL LEU THR GLN LYS SER LYS ASP SEQRES 7 B 98 GLN LEU GLY GLU LEU ASP LYS SER LEU LYS ARG LEU ARG SEQRES 8 B 98 LYS GLN LEU GLY GLU THR ASP SEQRES 1 C 98 GLY ASP PRO ALA PRO LEU GLU GLN MSE ARG LEU THR GLU SEQRES 2 C 98 GLN ALA LEU GLU GLN ALA LYS ALA VAL GLY ALA THR ASP SEQRES 3 C 98 ASP VAL ALA GLU LEU LYS LEU ALA GLN ASP LYS TYR ALA SEQRES 4 C 98 ALA ALA GLN ILE ALA MSE THR ALA GLU SER TYR LYS LYS SEQRES 5 C 98 ALA ARG LEU LEU ALA GLU GLN ALA GLU LEU ASP ALA ARG SEQRES 6 C 98 LEU ALA GLU SER LYS VAL LEU THR GLN LYS SER LYS ASP SEQRES 7 C 98 GLN LEU GLY GLU LEU ASP LYS SER LEU LYS ARG LEU ARG SEQRES 8 C 98 LYS GLN LEU GLY GLU THR ASP SEQRES 1 D 98 GLY ASP PRO ALA PRO LEU GLU GLN MSE ARG LEU THR GLU SEQRES 2 D 98 GLN ALA LEU GLU GLN ALA LYS ALA VAL GLY ALA THR ASP SEQRES 3 D 98 ASP VAL ALA GLU LEU LYS LEU ALA GLN ASP LYS TYR ALA SEQRES 4 D 98 ALA ALA GLN ILE ALA MSE THR ALA GLU SER TYR LYS LYS SEQRES 5 D 98 ALA ARG LEU LEU ALA GLU GLN ALA GLU LEU ASP ALA ARG SEQRES 6 D 98 LEU ALA GLU SER LYS VAL LEU THR GLN LYS SER LYS ASP SEQRES 7 D 98 GLN LEU GLY GLU LEU ASP LYS SER LEU LYS ARG LEU ARG SEQRES 8 D 98 LYS GLN LEU GLY GLU THR ASP MODRES 4FM3 MSE A 30 MET SELENOMETHIONINE MODRES 4FM3 MSE A 66 MET SELENOMETHIONINE MODRES 4FM3 MSE B 30 MET SELENOMETHIONINE MODRES 4FM3 MSE B 66 MET SELENOMETHIONINE MODRES 4FM3 MSE C 30 MET SELENOMETHIONINE MODRES 4FM3 MSE C 66 MET SELENOMETHIONINE MODRES 4FM3 MSE D 30 MET SELENOMETHIONINE MODRES 4FM3 MSE D 66 MET SELENOMETHIONINE HET MSE A 30 8 HET MSE A 66 8 HET MSE B 30 8 HET MSE B 66 8 HET MSE C 30 8 HET MSE C 66 8 HET MSE D 30 8 HET MSE D 66 8 HET SO4 A 201 5 HET PG4 A 202 13 HET SO4 B 201 5 HET SO4 B 202 5 HET SO4 B 203 5 HET SO4 C 201 5 HET SO4 D 201 5 HET SO4 D 202 5 HET SO4 D 203 5 HET SO4 D 204 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 5 SO4 9(O4 S 2-) FORMUL 6 PG4 C8 H18 O5 FORMUL 15 HOH *60(H2 O) HELIX 1 1 PRO A 26 VAL A 43 1 18 HELIX 2 2 VAL A 49 ALA A 68 1 20 HELIX 3 3 SER A 70 GLY A 116 1 47 HELIX 4 4 PRO B 26 VAL B 43 1 18 HELIX 5 5 VAL B 49 ALA B 68 1 20 HELIX 6 6 SER B 70 GLY B 116 1 47 HELIX 7 7 PRO C 26 VAL C 43 1 18 HELIX 8 8 VAL C 49 ALA C 68 1 20 HELIX 9 9 SER C 70 GLY C 116 1 47 HELIX 10 10 PRO D 26 VAL D 43 1 18 HELIX 11 11 VAL D 49 ALA D 68 1 20 HELIX 12 12 SER D 70 GLY D 116 1 47 LINK C GLN A 29 N MSE A 30 1555 1555 1.34 LINK C MSE A 30 N ARG A 31 1555 1555 1.36 LINK C ALA A 65 N MSE A 66 1555 1555 1.36 LINK C MSE A 66 N THR A 67 1555 1555 1.36 LINK C GLN B 29 N MSE B 30 1555 1555 1.36 LINK C MSE B 30 N ARG B 31 1555 1555 1.35 LINK C ALA B 65 N MSE B 66 1555 1555 1.37 LINK C MSE B 66 N THR B 67 1555 1555 1.36 LINK C GLN C 29 N MSE C 30 1555 1555 1.36 LINK C MSE C 30 N ARG C 31 1555 1555 1.35 LINK C ALA C 65 N MSE C 66 1555 1555 1.34 LINK C MSE C 66 N THR C 67 1555 1555 1.35 LINK C GLN D 29 N MSE D 30 1555 1555 1.35 LINK C MSE D 30 N ARG D 31 1555 1555 1.35 LINK C ALA D 65 N MSE D 66 1555 1555 1.35 LINK C MSE D 66 N THR D 67 1555 1555 1.35 CISPEP 1 ASP A 23 PRO A 24 0 -5.43 CISPEP 2 ASP B 23 PRO B 24 0 -4.22 SITE 1 AC1 5 LYS A 109 ARG A 112 HOH A 313 GLU B 51 SITE 2 AC1 5 LYS B 91 SITE 1 AC2 4 LYS A 96 GLN A 100 GLN D 100 GLU D 103 SITE 1 AC3 5 GLU A 51 LYS A 91 LYS B 109 ARG B 112 SITE 2 AC3 5 HOH B 310 SITE 1 AC4 3 GLN B 95 LYS B 98 LYS B 113 SITE 1 AC5 1 LYS B 106 SITE 1 AC6 6 ALA C 25 PRO C 26 LEU C 27 GLU C 28 SITE 2 AC6 6 GLN C 29 ARG C 75 SITE 1 AC7 3 LYS C 91 LYS D 109 ARG D 112 SITE 1 AC8 3 ARG C 112 GLU D 51 LYS D 91 SITE 1 AC9 4 SER C 70 LYS C 73 SER D 70 LYS D 73 SITE 1 BC1 5 PRO D 26 LEU D 27 GLU D 28 GLN D 29 SITE 2 BC1 5 ARG D 75 CRYST1 110.690 48.740 89.930 90.00 109.84 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009034 0.000000 0.003260 0.00000 SCALE2 0.000000 0.020517 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011821 0.00000