HEADER TRANSPORT PROTEIN 18-JUN-12 4FMS TITLE CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OCCK2 (OPDF) IN COMPLEX TITLE 2 WITH GLUCURONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE PORIN; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: UNP RESIDUES 25-421; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: PA0240; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-BARREL, OUTER MEMBRANE TRANSPORTER (PORIN), GLUCURONATE, OUTER KEYWDS 2 MEMBRANE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.VAN DEN BERG,E.EREN REVDAT 5 28-FEB-24 4FMS 1 HETSYN REVDAT 4 29-JUL-20 4FMS 1 COMPND REMARK HETNAM HETSYN REVDAT 4 2 1 SITE REVDAT 3 22-MAY-13 4FMS 1 JRNL REVDAT 2 27-MAR-13 4FMS 1 JRNL REVDAT 1 13-MAR-13 4FMS 0 JRNL AUTH E.EREN,J.PARKIN,A.ADELANWA,B.CHENEKE,L.MOVILEANU,S.KHALID, JRNL AUTH 2 B.VAN DEN BERG JRNL TITL TOWARD UNDERSTANDING THE OUTER MEMBRANE UPTAKE OF SMALL JRNL TITL 2 MOLECULES BY PSEUDOMONAS AERUGINOSA. JRNL REF J.BIOL.CHEM. V. 288 12042 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23467408 JRNL DOI 10.1074/JBC.M113.463570 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 32300 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1888 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.9922 - 5.6636 0.95 2434 152 0.2304 0.2723 REMARK 3 2 5.6636 - 4.5364 0.97 2468 154 0.1714 0.2173 REMARK 3 3 4.5364 - 3.9752 0.97 2447 155 0.1725 0.1846 REMARK 3 4 3.9752 - 3.6173 0.97 2481 151 0.1905 0.2395 REMARK 3 5 3.6173 - 3.3612 0.97 2457 146 0.1843 0.2281 REMARK 3 6 3.3612 - 3.1649 0.94 2403 152 0.1925 0.2524 REMARK 3 7 3.1649 - 3.0078 0.91 2297 142 0.1937 0.2626 REMARK 3 8 3.0078 - 2.8778 0.90 2266 141 0.1964 0.2810 REMARK 3 9 2.8778 - 2.7677 0.87 2229 135 0.2021 0.3099 REMARK 3 10 2.7677 - 2.6728 0.89 2247 136 0.1936 0.2711 REMARK 3 11 2.6728 - 2.5896 0.88 2218 141 0.1878 0.2438 REMARK 3 12 2.5896 - 2.5160 0.86 2233 142 0.1973 0.2959 REMARK 3 13 2.5160 - 2.4500 0.90 2232 141 0.1934 0.2775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.42 REMARK 3 B_SOL : 60.21 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.07080 REMARK 3 B22 (A**2) : -5.11220 REMARK 3 B33 (A**2) : 6.18300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.76150 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6123 REMARK 3 ANGLE : 1.174 8219 REMARK 3 CHIRALITY : 0.077 828 REMARK 3 PLANARITY : 0.004 1057 REMARK 3 DIHEDRAL : 19.395 2288 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FMS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073094. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34356 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 1K, 50 MM GLUCURONATE, 50 MM REMARK 280 LI2SO4, 50 MM NA2SO4 AND 50 MM NA-ACETATE, PH 5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 100K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 103.40100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 1 REMARK 465 HIS B 2 REMARK 465 VAL B 3 REMARK 465 HIS B 4 REMARK 465 ALA B 5 REMARK 465 GLY B 6 REMARK 465 ASP B 31 REMARK 465 ALA B 32 REMARK 465 SER B 33 REMARK 465 GLN B 34 REMARK 465 GLY B 73 REMARK 465 GLY B 74 REMARK 465 LYS B 75 REMARK 465 GLY B 76 REMARK 465 THR B 77 REMARK 465 ALA B 78 REMARK 465 GLY B 79 REMARK 465 THR B 80 REMARK 465 GLN B 81 REMARK 465 LEU B 82 REMARK 465 LEU B 83 REMARK 465 PRO B 84 REMARK 465 ILE B 85 REMARK 465 HIS B 86 REMARK 465 ASP B 87 REMARK 465 ASP B 88 REMARK 465 GLY B 89 REMARK 465 ARG B 90 REMARK 465 PRO B 91 REMARK 465 GLY A 30 REMARK 465 ASP A 31 REMARK 465 ALA A 32 REMARK 465 SER A 33 REMARK 465 GLN A 34 REMARK 465 GLY A 73 REMARK 465 GLY A 74 REMARK 465 LYS A 75 REMARK 465 GLY A 76 REMARK 465 THR A 77 REMARK 465 ALA A 78 REMARK 465 GLY A 79 REMARK 465 THR A 80 REMARK 465 GLN A 81 REMARK 465 LEU A 82 REMARK 465 LEU A 83 REMARK 465 PRO A 84 REMARK 465 ILE A 85 REMARK 465 HIS A 86 REMARK 465 ASP A 87 REMARK 465 ASP A 88 REMARK 465 GLY A 89 REMARK 465 ARG A 90 REMARK 465 PRO A 91 REMARK 465 GLY A 378 REMARK 465 SER A 379 REMARK 465 ASN A 380 REMARK 465 THR A 381 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 7 CG CD OE1 NE2 REMARK 470 LYS B 14 CD CE NZ REMARK 470 LYS B 36 NZ REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 470 ASP B 72 CB CG OD1 OD2 REMARK 470 ARG B 105 CZ NH1 NH2 REMARK 470 GLU B 194 CG CD OE1 OE2 REMARK 470 LYS B 206 CE NZ REMARK 470 LYS A 14 CD CE NZ REMARK 470 LYS A 36 CD CE NZ REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 GLU A 194 CG CD OE1 OE2 REMARK 470 LYS A 246 CD CE NZ REMARK 470 ARG A 259 CZ NH1 NH2 REMARK 470 ARG A 348 NE CZ NH1 NH2 REMARK 470 ARG A 363 NE CZ NH1 NH2 REMARK 470 ARG A 374 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 291 O HOH B 593 1.91 REMARK 500 OE1 GLN B 307 O HOH B 593 1.96 REMARK 500 OD1 ASP B 248 NH2 ARG B 250 2.09 REMARK 500 O ASP B 72 O HOH B 570 2.13 REMARK 500 O HOH A 560 O HOH A 587 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 107 -119.00 59.19 REMARK 500 ARG B 129 -116.53 -127.03 REMARK 500 ILE B 208 -66.40 -123.61 REMARK 500 LEU B 319 72.28 -118.47 REMARK 500 VAL B 339 -60.83 -129.41 REMARK 500 ASP B 342 62.81 -157.49 REMARK 500 ARG B 363 -7.35 89.94 REMARK 500 ASP B 376 31.62 -89.65 REMARK 500 SER A 107 -113.32 56.81 REMARK 500 LEU A 123 86.22 -157.05 REMARK 500 ARG A 129 -133.23 -139.01 REMARK 500 ILE A 208 -63.88 -125.29 REMARK 500 ASP A 248 118.58 -161.77 REMARK 500 ASN A 291 31.10 -90.48 REMARK 500 LEU A 317 32.79 -98.39 REMARK 500 VAL A 339 -55.57 -124.71 REMARK 500 ASP A 342 64.46 -159.19 REMARK 500 ARG A 363 -8.18 86.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E B 405 REMARK 610 C8E B 406 REMARK 610 C8E B 407 REMARK 610 PGV B 408 REMARK 610 C8E A 404 REMARK 610 C8E A 406 REMARK 610 PGV A 407 REMARK 610 PGV A 408 REMARK 610 PGV A 409 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SZD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OCCK2 (OPDF) DBREF 4FMS B 1 397 UNP Q9I6P8 Q9I6P8_PSEAE 25 421 DBREF 4FMS A 1 397 UNP Q9I6P8 Q9I6P8_PSEAE 25 421 SEQRES 1 B 397 GLY HIS VAL HIS ALA GLY GLN GLY PHE LEU GLU ASP ALA SEQRES 2 B 397 LYS ALA SER LEU THR ALA ARG ASN PHE HIS LEU HIS ARG SEQRES 3 B 397 ASN PHE VAL GLY ASP ALA SER GLN GLY LYS ALA GLU GLU SEQRES 4 B 397 TRP THR GLN SER PHE ILE LEU ASP ALA ARG SER GLY PHE SEQRES 5 B 397 THR GLN GLY SER VAL GLY PHE GLY LEU ASP VAL LEU GLY SEQRES 6 B 397 LEU TYR SER LEU LYS LEU ASP GLY GLY LYS GLY THR ALA SEQRES 7 B 397 GLY THR GLN LEU LEU PRO ILE HIS ASP ASP GLY ARG PRO SEQRES 8 B 397 ALA ASP ASP PHE GLY ARG LEU ALA VAL ALA GLY LYS LEU SEQRES 9 B 397 ARG VAL SER ASN SER GLU LEU LYS ILE GLY GLU TRP MET SEQRES 10 B 397 PRO VAL LEU PRO ILE LEU ARG SER ASP ASP GLY ARG SER SEQRES 11 B 397 LEU PRO GLN THR PHE ARG GLY GLY GLN LEU SER ALA ASN SEQRES 12 B 397 GLU ILE ALA GLY LEU THR LEU TYR ALA GLY GLN PHE ARG SEQRES 13 B 397 GLY ASN SER PRO ARG ASN ASP ALA SER MET GLN ASP MET SEQRES 14 B 397 SER LEU PHE GLY ARG PRO ALA ALA THR SER ASP ARG PHE SEQRES 15 B 397 ASP PHE ALA GLY GLY GLU TYR ARG PHE ASN GLY GLU ARG SEQRES 16 B 397 SER LEU LEU GLY LEU TRP ASN ALA GLU LEU LYS ASP ILE SEQRES 17 B 397 TYR ARG GLN GLN TYR LEU GLN LEU GLN HIS SER GLN PRO SEQRES 18 B 397 LEU GLY ASP TRP LEU LEU GLY ALA ASN LEU GLY GLY PHE SEQRES 19 B 397 ARG GLY ARG ASP ALA GLY SER ALA ARG ALA GLY LYS LEU SEQRES 20 B 397 ASP ASN ARG THR VAL SER ALA LEU PHE SER ALA ARG TYR SEQRES 21 B 397 GLY LEU HIS THR LEU TYR LEU GLY LEU GLN LYS VAL SER SEQRES 22 B 397 GLY ASP ASP GLY TRP MET ARG VAL ASN GLY THR SER GLY SEQRES 23 B 397 GLY THR LEU ALA ASN ASP SER TYR ASN ALA SER TYR ASP SEQRES 24 B 397 ASN PRO GLY GLU ARG SER TRP GLN LEU ARG TYR ASP PHE SEQRES 25 B 397 ASP PHE VAL GLY LEU GLY LEU PRO GLY LEU THR PHE MET SEQRES 26 B 397 THR ARG TYR LEU HIS GLY ASP HIS VAL ARG LEU ALA GLY SEQRES 27 B 397 VAL THR ASP ASP GLY SER GLU TRP GLY ARG GLU SER GLU SEQRES 28 B 397 LEU GLY TYR THR LEU GLN SER GLY ALA PHE LYS ARG LEU SEQRES 29 B 397 ASN VAL ARG TRP ARG ASN SER SER GLN ARG ARG ASP TRP SEQRES 30 B 397 GLY SER ASN THR ARG PHE ASP GLU ASN ARG LEU ILE VAL SEQRES 31 B 397 SER TYR PRO LEU SER LEU LEU SEQRES 1 A 397 GLY HIS VAL HIS ALA GLY GLN GLY PHE LEU GLU ASP ALA SEQRES 2 A 397 LYS ALA SER LEU THR ALA ARG ASN PHE HIS LEU HIS ARG SEQRES 3 A 397 ASN PHE VAL GLY ASP ALA SER GLN GLY LYS ALA GLU GLU SEQRES 4 A 397 TRP THR GLN SER PHE ILE LEU ASP ALA ARG SER GLY PHE SEQRES 5 A 397 THR GLN GLY SER VAL GLY PHE GLY LEU ASP VAL LEU GLY SEQRES 6 A 397 LEU TYR SER LEU LYS LEU ASP GLY GLY LYS GLY THR ALA SEQRES 7 A 397 GLY THR GLN LEU LEU PRO ILE HIS ASP ASP GLY ARG PRO SEQRES 8 A 397 ALA ASP ASP PHE GLY ARG LEU ALA VAL ALA GLY LYS LEU SEQRES 9 A 397 ARG VAL SER ASN SER GLU LEU LYS ILE GLY GLU TRP MET SEQRES 10 A 397 PRO VAL LEU PRO ILE LEU ARG SER ASP ASP GLY ARG SER SEQRES 11 A 397 LEU PRO GLN THR PHE ARG GLY GLY GLN LEU SER ALA ASN SEQRES 12 A 397 GLU ILE ALA GLY LEU THR LEU TYR ALA GLY GLN PHE ARG SEQRES 13 A 397 GLY ASN SER PRO ARG ASN ASP ALA SER MET GLN ASP MET SEQRES 14 A 397 SER LEU PHE GLY ARG PRO ALA ALA THR SER ASP ARG PHE SEQRES 15 A 397 ASP PHE ALA GLY GLY GLU TYR ARG PHE ASN GLY GLU ARG SEQRES 16 A 397 SER LEU LEU GLY LEU TRP ASN ALA GLU LEU LYS ASP ILE SEQRES 17 A 397 TYR ARG GLN GLN TYR LEU GLN LEU GLN HIS SER GLN PRO SEQRES 18 A 397 LEU GLY ASP TRP LEU LEU GLY ALA ASN LEU GLY GLY PHE SEQRES 19 A 397 ARG GLY ARG ASP ALA GLY SER ALA ARG ALA GLY LYS LEU SEQRES 20 A 397 ASP ASN ARG THR VAL SER ALA LEU PHE SER ALA ARG TYR SEQRES 21 A 397 GLY LEU HIS THR LEU TYR LEU GLY LEU GLN LYS VAL SER SEQRES 22 A 397 GLY ASP ASP GLY TRP MET ARG VAL ASN GLY THR SER GLY SEQRES 23 A 397 GLY THR LEU ALA ASN ASP SER TYR ASN ALA SER TYR ASP SEQRES 24 A 397 ASN PRO GLY GLU ARG SER TRP GLN LEU ARG TYR ASP PHE SEQRES 25 A 397 ASP PHE VAL GLY LEU GLY LEU PRO GLY LEU THR PHE MET SEQRES 26 A 397 THR ARG TYR LEU HIS GLY ASP HIS VAL ARG LEU ALA GLY SEQRES 27 A 397 VAL THR ASP ASP GLY SER GLU TRP GLY ARG GLU SER GLU SEQRES 28 A 397 LEU GLY TYR THR LEU GLN SER GLY ALA PHE LYS ARG LEU SEQRES 29 A 397 ASN VAL ARG TRP ARG ASN SER SER GLN ARG ARG ASP TRP SEQRES 30 A 397 GLY SER ASN THR ARG PHE ASP GLU ASN ARG LEU ILE VAL SEQRES 31 A 397 SER TYR PRO LEU SER LEU LEU HET BDP B 401 13 HET SO4 B 402 5 HET SO4 B 403 5 HET C8E B 404 21 HET C8E B 405 17 HET C8E B 406 12 HET C8E B 407 17 HET PGV B 408 26 HET BDP A 401 13 HET SO4 A 402 5 HET SO4 A 403 5 HET C8E A 404 10 HET C8E A 405 21 HET C8E A 406 13 HET PGV A 407 26 HET PGV A 408 22 HET PGV A 409 24 HETNAM BDP BETA-D-GLUCOPYRANURONIC ACID HETNAM SO4 SULFATE ION HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE HETNAM PGV (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY) HETNAM 2 PGV PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)- HETNAM 3 PGV OCTADEC-11-ENOATE HETSYN BDP BETA-D-GLUCURONIC ACID; D-GLUCURONIC ACID; GLUCURONIC HETSYN 2 BDP ACID HETSYN PGV PHOSPHATIDYLGLYCEROL; 2-VACCENOYL-1-PALMITOYL-SN- HETSYN 2 PGV GLYCEROL-3-PHOSPHOGLYCEROL FORMUL 3 BDP 2(C6 H10 O7) FORMUL 4 SO4 4(O4 S 2-) FORMUL 6 C8E 7(C16 H34 O5) FORMUL 10 PGV 4(C40 H77 O10 P) FORMUL 20 HOH *231(H2 O) HELIX 1 1 VAL B 315 GLY B 318 5 4 HELIX 2 2 VAL A 315 GLY A 318 5 4 SHEET 1 A19 LYS B 14 PHE B 28 0 SHEET 2 A19 LYS B 36 ARG B 49 -1 O THR B 41 N PHE B 22 SHEET 3 A19 VAL B 57 LYS B 70 -1 O TYR B 67 N PHE B 44 SHEET 4 A19 ASP B 94 VAL B 106 -1 O ALA B 99 N LEU B 64 SHEET 5 A19 SER B 109 TRP B 116 -1 O ILE B 113 N GLY B 102 SHEET 6 A19 THR B 134 ALA B 142 -1 O PHE B 135 N TRP B 116 SHEET 7 A19 LEU B 148 SER B 159 -1 O ALA B 152 N LEU B 140 SHEET 8 A19 PHE B 182 PHE B 191 -1 O GLY B 186 N TYR B 151 SHEET 9 A19 SER B 196 LEU B 205 -1 O ASN B 202 N ALA B 185 SHEET 10 A19 TYR B 209 LEU B 222 -1 O GLN B 215 N GLY B 199 SHEET 11 A19 TRP B 225 ASP B 238 -1 O LEU B 227 N GLN B 220 SHEET 12 A19 ASP B 248 TYR B 260 -1 O SER B 253 N GLY B 232 SHEET 13 A19 HIS B 263 SER B 273 -1 O SER B 273 N ARG B 250 SHEET 14 A19 ARG B 304 ASP B 313 -1 O GLN B 307 N GLY B 268 SHEET 15 A19 LEU B 322 LEU B 336 -1 O THR B 326 N TYR B 310 SHEET 16 A19 THR B 340 THR B 355 -1 O THR B 340 N LEU B 336 SHEET 17 A19 ASN B 365 ARG B 375 -1 O TRP B 368 N LEU B 352 SHEET 18 A19 PHE B 383 SER B 395 -1 O SER B 391 N ASN B 365 SHEET 19 A19 LYS B 14 PHE B 28 -1 N ASN B 27 O ASP B 384 SHEET 1 B 2 VAL B 119 LEU B 120 0 SHEET 2 B 2 LEU B 123 ARG B 124 -1 O LEU B 123 N LEU B 120 SHEET 1 C 2 MET B 169 LEU B 171 0 SHEET 2 C 2 ARG B 174 SER B 179 -1 O SER B 179 N MET B 169 SHEET 1 D19 LYS A 14 PHE A 28 0 SHEET 2 D19 LYS A 36 ARG A 49 -1 O ARG A 49 N LYS A 14 SHEET 3 D19 VAL A 57 LYS A 70 -1 O TYR A 67 N PHE A 44 SHEET 4 D19 ASP A 94 VAL A 106 -1 O ALA A 99 N LEU A 64 SHEET 5 D19 SER A 109 TRP A 116 -1 O ILE A 113 N GLY A 102 SHEET 6 D19 THR A 134 ALA A 142 -1 O GLY A 137 N GLY A 114 SHEET 7 D19 LEU A 148 SER A 159 -1 O ALA A 152 N LEU A 140 SHEET 8 D19 PHE A 182 PHE A 191 -1 O GLY A 186 N TYR A 151 SHEET 9 D19 SER A 196 LEU A 205 -1 O LEU A 198 N TYR A 189 SHEET 10 D19 TYR A 209 LEU A 222 -1 O GLN A 215 N GLY A 199 SHEET 11 D19 TRP A 225 ASP A 238 -1 O LEU A 227 N GLN A 220 SHEET 12 D19 ASP A 248 TYR A 260 -1 O SER A 257 N GLY A 228 SHEET 13 D19 HIS A 263 SER A 273 -1 O SER A 273 N ARG A 250 SHEET 14 D19 ARG A 304 ASP A 313 -1 O SER A 305 N GLN A 270 SHEET 15 D19 LEU A 322 LEU A 336 -1 O THR A 326 N TYR A 310 SHEET 16 D19 THR A 340 THR A 355 -1 O GLU A 349 N ARG A 327 SHEET 17 D19 ASN A 365 ARG A 375 -1 O ARG A 374 N TRP A 346 SHEET 18 D19 PHE A 383 SER A 395 -1 O ARG A 387 N ARG A 369 SHEET 19 D19 LYS A 14 PHE A 28 -1 N ASN A 21 O VAL A 390 SHEET 1 E 2 VAL A 119 LEU A 120 0 SHEET 2 E 2 LEU A 123 ARG A 124 -1 O LEU A 123 N LEU A 120 SHEET 1 F 2 MET A 169 LEU A 171 0 SHEET 2 F 2 ARG A 174 SER A 179 -1 O SER A 179 N MET A 169 CRYST1 46.435 206.802 51.747 90.00 99.09 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021535 0.000000 0.003446 0.00000 SCALE2 0.000000 0.004836 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019571 0.00000