HEADER CELL ADHESION, CELL INVASION 18-JUN-12 4FMZ TITLE CRYSTAL STRUCTURE OF AN INTERNALIN (INLF) FROM LISTERIA MONOCYTOGENES TITLE 2 STR. 4B F2365 AT 1.91 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERNALIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES SEROTYPE 4B; SOURCE 3 ORGANISM_TAXID: 265669; SOURCE 4 STRAIN: F2365; SOURCE 5 GENE: INLF, LMOF2365_0429; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS LEUCINE RICH REPEAT, INTERNALIN_N DOMAIN, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-BIOLOGY, CELL ADHESION, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4FMZ 1 REMARK SEQADV LINK REVDAT 3 24-JAN-18 4FMZ 1 JRNL REVDAT 2 15-NOV-17 4FMZ 1 REMARK REVDAT 1 25-JUL-12 4FMZ 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AN INTERNALIN (INLF) FROM LISTERIA JRNL TITL 2 MONOCYTOGENES STR. 4B F2365 AT 1.91 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 47561 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2410 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.96 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.56 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3434 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2107 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3271 REMARK 3 BIN R VALUE (WORKING SET) : 0.2091 REMARK 3 BIN FREE R VALUE : 0.2427 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.75 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 163 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5197 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 434 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.52810 REMARK 3 B22 (A**2) : 3.34880 REMARK 3 B33 (A**2) : -0.82070 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.227 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5404 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7389 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2596 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 186 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 765 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5404 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 792 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6835 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.16 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.27 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.84 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|38 - 377 } REMARK 3 ORIGIN FOR THE GROUP (A): 39.5507 128.7380 20.2269 REMARK 3 T TENSOR REMARK 3 T11: 0.2317 T22: -0.1467 REMARK 3 T33: -0.1364 T12: -0.0190 REMARK 3 T13: -0.0090 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.2719 L22: 0.6228 REMARK 3 L33: 0.7633 L12: -0.3196 REMARK 3 L13: 0.2828 L23: -0.5861 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: 0.0253 S13: -0.0175 REMARK 3 S21: -0.1694 S22: 0.0007 S23: 0.0516 REMARK 3 S31: 0.0620 S32: 0.0230 S33: -0.0490 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|35 - 375 } REMARK 3 ORIGIN FOR THE GROUP (A): 39.8503 127.6520 46.3812 REMARK 3 T TENSOR REMARK 3 T11: 0.1516 T22: -0.1296 REMARK 3 T33: -0.1192 T12: -0.0131 REMARK 3 T13: -0.0052 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.2177 L22: 0.6522 REMARK 3 L33: 0.7913 L12: 0.1114 REMARK 3 L13: -0.2553 L23: -0.1778 REMARK 3 S TENSOR REMARK 3 S11: -0.0330 S12: -0.0053 S13: 0.0024 REMARK 3 S21: -0.0363 S22: 0.0041 S23: -0.0038 REMARK 3 S31: -0.0324 S32: 0.0114 S33: 0.0289 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2.ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3.1,2-ETHANEDIOL (EDO) FROM THE CRYOPROTECTANT SOLUTION REMARK 3 HAS BEEN MODELED IN THE SOLVENT STRUCTURE. 4.NCS RESTRAINTS WERE REMARK 3 APPLIED DURING REFINEMENT USING LSSR (-AUTONCS) IN BUSTER. 5.THE REMARK 3 EXPERIMENTAL PHASES (MAD) IN THE FORM OF HENDRICKSON- LATTMAN REMARK 3 COEFFCIENTS WERE USED AS RESTRAINTS DURING CRYSTALLOGRAPHIC REMARK 3 REFINEMENT. REMARK 4 REMARK 4 4FMZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073101. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97929,0.9786 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE DECEMBER 29, 2011 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47630 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 27.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M TRI-SODIUM CITRATE, 0.1M SODIUM REMARK 280 HEPES PH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.09550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.26700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.27400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.26700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.09550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.27400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 35 REMARK 465 ALA A 36 REMARK 465 VAL A 377 REMARK 465 ILE A 378 REMARK 465 LYS A 379 REMARK 465 LYS A 380 REMARK 465 ASN B 375 REMARK 465 GLN B 376 REMARK 465 VAL B 377 REMARK 465 ILE B 378 REMARK 465 LYS B 379 REMARK 465 LYS B 380 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 88 CE NZ REMARK 470 LYS A 295 CG CD CE NZ REMARK 470 LYS A 299 CE NZ REMARK 470 LYS A 367 CG CD CE NZ REMARK 470 LYS B 88 CE NZ REMARK 470 LYS B 132 CE NZ REMARK 470 LYS B 201 CE NZ REMARK 470 LYS B 265 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 39 -34.66 -35.22 REMARK 500 GLU A 87 -144.88 -115.62 REMARK 500 ASN A 109 -151.48 -123.82 REMARK 500 ASN A 131 -161.88 -128.14 REMARK 500 ASP A 153 -164.54 -102.19 REMARK 500 SER A 179 -32.42 -143.05 REMARK 500 ASN A 220 -147.09 -114.45 REMARK 500 ALA A 239 40.11 -155.62 REMARK 500 VAL A 241 65.87 62.75 REMARK 500 ASN A 242 -158.17 -136.53 REMARK 500 ILE A 261 41.01 -146.48 REMARK 500 ILE A 283 37.98 -145.45 REMARK 500 ASN A 286 -159.21 -127.51 REMARK 500 ASN A 308 -158.96 -133.56 REMARK 500 LEU A 319 52.21 -103.13 REMARK 500 ASN A 330 -159.22 -129.35 REMARK 500 ASN A 354 -139.11 -112.04 REMARK 500 ASP A 372 16.20 -68.23 REMARK 500 GLU B 87 -143.38 -116.97 REMARK 500 ASN B 109 -153.81 -128.40 REMARK 500 ASN B 131 -160.97 -127.91 REMARK 500 ASP B 153 -164.72 -103.01 REMARK 500 SER B 179 -32.59 -142.86 REMARK 500 ASN B 220 -150.61 -112.53 REMARK 500 ALA B 239 39.84 -154.52 REMARK 500 VAL B 241 66.37 63.03 REMARK 500 ASN B 242 -158.62 -136.82 REMARK 500 ILE B 261 40.55 -146.10 REMARK 500 ILE B 283 36.75 -146.60 REMARK 500 ASN B 286 -158.84 -128.63 REMARK 500 ASN B 308 -158.91 -133.66 REMARK 500 LEU B 319 53.02 -104.06 REMARK 500 ASN B 330 -158.89 -128.54 REMARK 500 ASN B 354 -153.06 -109.50 REMARK 500 ASP B 358 125.71 173.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 907 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-423596 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT (RESIDUES 35-380) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4FMZ A 35 380 UNP Q723P8 Q723P8_LISMF 35 380 DBREF 4FMZ B 35 380 UNP Q723P8 Q723P8_LISMF 35 380 SEQADV 4FMZ GLY A 0 UNP Q723P8 EXPRESSION TAG SEQADV 4FMZ GLY B 0 UNP Q723P8 EXPRESSION TAG SEQRES 1 A 347 GLY ALA ALA THR LEU ALA THR LEU PRO ALA PRO ILE ASN SEQRES 2 A 347 GLN ILE PHE PRO ASP ALA ASP LEU ALA GLU GLY ILE ARG SEQRES 3 A 347 ALA VAL LEU GLN LYS ALA SER VAL THR ASP VAL VAL THR SEQRES 4 A 347 GLN GLU GLU LEU GLU SER ILE THR LYS LEU VAL VAL ALA SEQRES 5 A 347 GLY GLU LYS VAL ALA SER ILE GLN GLY ILE GLU TYR LEU SEQRES 6 A 347 THR ASN LEU GLU TYR LEU ASN LEU ASN GLY ASN GLN ILE SEQRES 7 A 347 THR ASP ILE SER PRO LEU SER ASN LEU VAL LYS LEU THR SEQRES 8 A 347 ASN LEU TYR ILE GLY THR ASN LYS ILE THR ASP ILE SER SEQRES 9 A 347 ALA LEU GLN ASN LEU THR ASN LEU ARG GLU LEU TYR LEU SEQRES 10 A 347 ASN GLU ASP ASN ILE SER ASP ILE SER PRO LEU ALA ASN SEQRES 11 A 347 LEU THR LYS MSE TYR SER LEU ASN LEU GLY ALA ASN HIS SEQRES 12 A 347 ASN LEU SER ASP LEU SER PRO LEU SER ASN MSE THR GLY SEQRES 13 A 347 LEU ASN TYR LEU THR VAL THR GLU SER LYS VAL LYS ASP SEQRES 14 A 347 VAL THR PRO ILE ALA ASN LEU THR ASP LEU TYR SER LEU SEQRES 15 A 347 SER LEU ASN TYR ASN GLN ILE GLU ASP ILE SER PRO LEU SEQRES 16 A 347 ALA SER LEU THR SER LEU HIS TYR PHE THR ALA TYR VAL SEQRES 17 A 347 ASN GLN ILE THR ASP ILE THR PRO VAL ALA ASN MSE THR SEQRES 18 A 347 ARG LEU ASN SER LEU LYS ILE GLY ASN ASN LYS ILE THR SEQRES 19 A 347 ASP LEU SER PRO LEU ALA ASN LEU SER GLN LEU THR TRP SEQRES 20 A 347 LEU GLU ILE GLY THR ASN GLN ILE SER ASP ILE ASN ALA SEQRES 21 A 347 VAL LYS ASP LEU THR LYS LEU LYS MSE LEU ASN VAL GLY SEQRES 22 A 347 SER ASN GLN ILE SER ASP ILE SER VAL LEU ASN ASN LEU SEQRES 23 A 347 SER GLN LEU ASN SER LEU PHE LEU ASN ASN ASN GLN LEU SEQRES 24 A 347 GLY ASN GLU ASP MSE GLU VAL ILE GLY GLY LEU THR ASN SEQRES 25 A 347 LEU THR THR LEU PHE LEU SER GLN ASN HIS ILE THR ASP SEQRES 26 A 347 ILE ARG PRO LEU ALA SER LEU SER LYS MSE ASP SER ALA SEQRES 27 A 347 ASP PHE ALA ASN GLN VAL ILE LYS LYS SEQRES 1 B 347 GLY ALA ALA THR LEU ALA THR LEU PRO ALA PRO ILE ASN SEQRES 2 B 347 GLN ILE PHE PRO ASP ALA ASP LEU ALA GLU GLY ILE ARG SEQRES 3 B 347 ALA VAL LEU GLN LYS ALA SER VAL THR ASP VAL VAL THR SEQRES 4 B 347 GLN GLU GLU LEU GLU SER ILE THR LYS LEU VAL VAL ALA SEQRES 5 B 347 GLY GLU LYS VAL ALA SER ILE GLN GLY ILE GLU TYR LEU SEQRES 6 B 347 THR ASN LEU GLU TYR LEU ASN LEU ASN GLY ASN GLN ILE SEQRES 7 B 347 THR ASP ILE SER PRO LEU SER ASN LEU VAL LYS LEU THR SEQRES 8 B 347 ASN LEU TYR ILE GLY THR ASN LYS ILE THR ASP ILE SER SEQRES 9 B 347 ALA LEU GLN ASN LEU THR ASN LEU ARG GLU LEU TYR LEU SEQRES 10 B 347 ASN GLU ASP ASN ILE SER ASP ILE SER PRO LEU ALA ASN SEQRES 11 B 347 LEU THR LYS MSE TYR SER LEU ASN LEU GLY ALA ASN HIS SEQRES 12 B 347 ASN LEU SER ASP LEU SER PRO LEU SER ASN MSE THR GLY SEQRES 13 B 347 LEU ASN TYR LEU THR VAL THR GLU SER LYS VAL LYS ASP SEQRES 14 B 347 VAL THR PRO ILE ALA ASN LEU THR ASP LEU TYR SER LEU SEQRES 15 B 347 SER LEU ASN TYR ASN GLN ILE GLU ASP ILE SER PRO LEU SEQRES 16 B 347 ALA SER LEU THR SER LEU HIS TYR PHE THR ALA TYR VAL SEQRES 17 B 347 ASN GLN ILE THR ASP ILE THR PRO VAL ALA ASN MSE THR SEQRES 18 B 347 ARG LEU ASN SER LEU LYS ILE GLY ASN ASN LYS ILE THR SEQRES 19 B 347 ASP LEU SER PRO LEU ALA ASN LEU SER GLN LEU THR TRP SEQRES 20 B 347 LEU GLU ILE GLY THR ASN GLN ILE SER ASP ILE ASN ALA SEQRES 21 B 347 VAL LYS ASP LEU THR LYS LEU LYS MSE LEU ASN VAL GLY SEQRES 22 B 347 SER ASN GLN ILE SER ASP ILE SER VAL LEU ASN ASN LEU SEQRES 23 B 347 SER GLN LEU ASN SER LEU PHE LEU ASN ASN ASN GLN LEU SEQRES 24 B 347 GLY ASN GLU ASP MSE GLU VAL ILE GLY GLY LEU THR ASN SEQRES 25 B 347 LEU THR THR LEU PHE LEU SER GLN ASN HIS ILE THR ASP SEQRES 26 B 347 ILE ARG PRO LEU ALA SER LEU SER LYS MSE ASP SER ALA SEQRES 27 B 347 ASP PHE ALA ASN GLN VAL ILE LYS LYS MODRES 4FMZ MSE A 167 MET SELENOMETHIONINE MODRES 4FMZ MSE A 187 MET SELENOMETHIONINE MODRES 4FMZ MSE A 253 MET SELENOMETHIONINE MODRES 4FMZ MSE A 302 MET SELENOMETHIONINE MODRES 4FMZ MSE A 337 MET SELENOMETHIONINE MODRES 4FMZ MSE A 368 MET SELENOMETHIONINE MODRES 4FMZ MSE B 167 MET SELENOMETHIONINE MODRES 4FMZ MSE B 187 MET SELENOMETHIONINE MODRES 4FMZ MSE B 253 MET SELENOMETHIONINE MODRES 4FMZ MSE B 302 MET SELENOMETHIONINE MODRES 4FMZ MSE B 337 MET SELENOMETHIONINE MODRES 4FMZ MSE B 368 MET SELENOMETHIONINE HET MSE A 167 8 HET MSE A 187 8 HET MSE A 253 8 HET MSE A 302 8 HET MSE A 337 13 HET MSE A 368 8 HET MSE B 167 8 HET MSE B 187 8 HET MSE B 253 8 HET MSE B 302 8 HET MSE B 337 8 HET MSE B 368 8 HET EDO A 401 4 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO B 901 4 HET EDO B 902 4 HET EDO B 903 4 HET EDO B 904 4 HET EDO B 905 4 HET EDO B 906 4 HET EDO B 907 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 EDO 13(C2 H6 O2) FORMUL 16 HOH *434(H2 O) HELIX 1 1 ILE A 45 PHE A 49 1 5 HELIX 2 2 ASP A 51 GLN A 63 1 13 HELIX 3 3 THR A 72 GLU A 77 1 6 HELIX 4 4 GLY A 94 LEU A 98 5 5 HELIX 5 5 ILE A 114 SER A 118 5 5 HELIX 6 6 ILE A 136 GLN A 140 5 5 HELIX 7 7 ILE A 158 ALA A 162 5 5 HELIX 8 8 LEU A 181 SER A 185 5 5 HELIX 9 9 VAL A 203 LEU A 209 5 7 HELIX 10 10 ILE A 225 LEU A 231 5 7 HELIX 11 11 ILE A 247 MSE A 253 5 7 HELIX 12 12 LEU A 269 ALA A 273 5 5 HELIX 13 13 ILE A 291 LYS A 295 5 5 HELIX 14 14 ILE A 313 LEU A 319 5 7 HELIX 15 15 GLY A 333 GLU A 335 5 3 HELIX 16 16 ASP A 336 GLY A 342 1 7 HELIX 17 17 ILE A 359 LEU A 365 5 7 HELIX 18 18 THR B 37 LEU B 41 5 5 HELIX 19 19 ILE B 45 PHE B 49 1 5 HELIX 20 20 ASP B 51 GLN B 63 1 13 HELIX 21 21 THR B 72 GLU B 77 1 6 HELIX 22 22 GLY B 94 LEU B 98 5 5 HELIX 23 23 ILE B 114 SER B 118 5 5 HELIX 24 24 ILE B 136 GLN B 140 5 5 HELIX 25 25 ILE B 158 ALA B 162 5 5 HELIX 26 26 LEU B 181 SER B 185 5 5 HELIX 27 27 VAL B 203 LEU B 209 5 7 HELIX 28 28 ILE B 225 LEU B 231 5 7 HELIX 29 29 ILE B 247 MSE B 253 5 7 HELIX 30 30 LEU B 269 ALA B 273 5 5 HELIX 31 31 ILE B 291 LYS B 295 5 5 HELIX 32 32 ILE B 313 LEU B 319 5 7 HELIX 33 33 GLY B 333 GLU B 335 5 3 HELIX 34 34 ASP B 336 GLY B 342 1 7 HELIX 35 35 ILE B 359 LEU B 365 5 7 SHEET 1 A 2 ALA A 43 PRO A 44 0 SHEET 2 A 2 VAL A 70 VAL A 71 -1 O VAL A 71 N ALA A 43 SHEET 1 B14 LYS A 81 VAL A 83 0 SHEET 2 B14 TYR A 103 ASN A 105 1 O ASN A 105 N LEU A 82 SHEET 3 B14 ASN A 125 TYR A 127 1 O TYR A 127 N LEU A 104 SHEET 4 B14 GLU A 147 TYR A 149 1 O GLU A 147 N LEU A 126 SHEET 5 B14 SER A 169 ASN A 171 1 O ASN A 171 N LEU A 148 SHEET 6 B14 TYR A 192 THR A 194 1 O TYR A 192 N LEU A 170 SHEET 7 B14 SER A 214 SER A 216 1 O SER A 216 N LEU A 193 SHEET 8 B14 TYR A 236 THR A 238 1 O TYR A 236 N LEU A 215 SHEET 9 B14 SER A 258 LYS A 260 1 O SER A 258 N PHE A 237 SHEET 10 B14 TRP A 280 GLU A 282 1 O GLU A 282 N LEU A 259 SHEET 11 B14 MSE A 302 ASN A 304 1 O ASN A 304 N LEU A 281 SHEET 12 B14 SER A 324 PHE A 326 1 O PHE A 326 N LEU A 303 SHEET 13 B14 THR A 348 PHE A 350 1 O PHE A 350 N LEU A 325 SHEET 14 B14 SER A 370 ALA A 371 1 O SER A 370 N LEU A 349 SHEET 1 C 2 ALA B 43 PRO B 44 0 SHEET 2 C 2 VAL B 70 VAL B 71 -1 O VAL B 71 N ALA B 43 SHEET 1 D14 LYS B 81 VAL B 83 0 SHEET 2 D14 TYR B 103 ASN B 105 1 O TYR B 103 N LEU B 82 SHEET 3 D14 ASN B 125 TYR B 127 1 O TYR B 127 N LEU B 104 SHEET 4 D14 GLU B 147 TYR B 149 1 O GLU B 147 N LEU B 126 SHEET 5 D14 SER B 169 ASN B 171 1 O ASN B 171 N LEU B 148 SHEET 6 D14 TYR B 192 THR B 194 1 O TYR B 192 N LEU B 170 SHEET 7 D14 SER B 214 SER B 216 1 O SER B 216 N LEU B 193 SHEET 8 D14 TYR B 236 THR B 238 1 O TYR B 236 N LEU B 215 SHEET 9 D14 SER B 258 LYS B 260 1 O SER B 258 N PHE B 237 SHEET 10 D14 TRP B 280 GLU B 282 1 O GLU B 282 N LEU B 259 SHEET 11 D14 MSE B 302 ASN B 304 1 O ASN B 304 N LEU B 281 SHEET 12 D14 SER B 324 PHE B 326 1 O PHE B 326 N LEU B 303 SHEET 13 D14 THR B 348 PHE B 350 1 O PHE B 350 N LEU B 325 SHEET 14 D14 SER B 370 ALA B 371 1 O SER B 370 N LEU B 349 LINK C LYS A 166 N MSE A 167 1555 1555 1.35 LINK C MSE A 167 N TYR A 168 1555 1555 1.34 LINK C ASN A 186 N MSE A 187 1555 1555 1.34 LINK C MSE A 187 N THR A 188 1555 1555 1.34 LINK C ASN A 252 N MSE A 253 1555 1555 1.35 LINK C MSE A 253 N THR A 254 1555 1555 1.35 LINK C LYS A 301 N MSE A 302 1555 1555 1.35 LINK C MSE A 302 N LEU A 303 1555 1555 1.33 LINK C ASP A 336 N MSE A 337 1555 1555 1.34 LINK C MSE A 337 N GLU A 338 1555 1555 1.33 LINK C LYS A 367 N MSE A 368 1555 1555 1.36 LINK C MSE A 368 N ASP A 369 1555 1555 1.36 LINK C LYS B 166 N MSE B 167 1555 1555 1.35 LINK C MSE B 167 N TYR B 168 1555 1555 1.34 LINK C ASN B 186 N MSE B 187 1555 1555 1.34 LINK C MSE B 187 N THR B 188 1555 1555 1.34 LINK C ASN B 252 N MSE B 253 1555 1555 1.35 LINK C MSE B 253 N THR B 254 1555 1555 1.35 LINK C LYS B 301 N MSE B 302 1555 1555 1.35 LINK C MSE B 302 N LEU B 303 1555 1555 1.36 LINK C ASP B 336 N MSE B 337 1555 1555 1.34 LINK C MSE B 337 N GLU B 338 1555 1555 1.35 LINK C LYS B 367 N MSE B 368 1555 1555 1.33 LINK C MSE B 368 N ASP B 369 1555 1555 1.34 CISPEP 1 LEU A 41 PRO A 42 0 1.87 CISPEP 2 LEU B 41 PRO B 42 0 -2.11 SITE 1 AC1 8 TYR A 192 LEU A 193 THR A 194 SER A 214 SITE 2 AC1 8 SER A 216 HOH A 601 SER B 352 GLN B 353 SITE 1 AC2 5 SER A 78 THR A 80 LYS A 81 GLN B 63 SITE 2 AC2 5 LYS B 64 SITE 1 AC3 5 ASN A 220 GLN A 221 VAL A 241 ASN A 242 SITE 2 AC3 5 GLN A 243 SITE 1 AC4 5 TRP A 280 ASN A 323 SER A 324 SER B 324 SITE 2 AC4 5 HOH B1058 SITE 1 AC5 4 LEU A 351 ILE A 356 HOH A 501 HOH A 517 SITE 1 AC6 7 THR A 285 ASN A 304 GLY A 306 SER A 307 SITE 2 AC6 7 ASN A 328 HOH A 610 TYR B 240 SITE 1 AC7 9 SER A 352 GLN A 353 HOH A 629 TYR B 192 SITE 2 AC7 9 LEU B 193 THR B 194 SER B 214 SER B 216 SITE 3 AC7 9 HOH B1142 SITE 1 AC8 8 ALA B 138 GLN B 140 GLY B 189 ASN B 191 SITE 2 AC8 8 ASP B 211 HOH B1067 HOH B1103 HOH B1104 SITE 1 AC9 7 PRO A 50 SER A 91 GLN A 93 PRO B 50 SITE 2 AC9 7 ASP B 51 SER B 91 HOH B1094 SITE 1 BC1 2 SER B 179 HOH B1034 SITE 1 BC2 4 ASN A 274 THR B 248 SER B 270 PRO B 271 SITE 1 BC3 4 HOH A 694 GLN B 140 ASN B 163 TYR B 168 SITE 1 BC4 7 ASN A 329 HOH A 538 ASN B 151 ASN B 171 SITE 2 BC4 7 GLY B 173 THR B 196 HOH B1143 CRYST1 46.191 102.548 128.534 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021649 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009752 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007780 0.00000