HEADER ISOMERASE 19-JUN-12 4FNB TITLE CRYSTAL STRUCTURE OF THE MTB ENOYL COA ISOMERASE (RV0632C) IN COMPLEX TITLE 2 WITH HYDROXYBUTYRL COA CAVEAT 4FNB CHIRALITY ERROR AT C3, C3B AND C1B OF 3HC A 302 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-COA HYDRATASE/ISOMERASE FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENOYL-COA HYDRATASE HOMOLOG, PROBABLE ENOYL-COA HYDRATASE COMPND 5 ECHA3 (ENOYL HYDRASE) (UNSATURATED ACYL-COA HYDRATASE) (CROTONASE); COMPND 6 EC: 4.2.1.17; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: ECHA3, MT0660, RV0632C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP16 KEYWDS STRUCTURAL GENOMICS, TB STRUCTURAL GENOMICS CONSORTIUM, TBSGC, KEYWDS 2 CROTONASE SUPERFAMILY, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BRUNING,N.GAO,E.D.HERNANDEZ,H.LI,N.DANG,L.W.HUNG,J.C.SACCHETTINI, AUTHOR 2 TB STRUCTURAL GENOMICS CONSORTIUM (TBSGC) REVDAT 2 13-SEP-23 4FNB 1 REMARK SEQADV REVDAT 1 29-MAY-13 4FNB 0 JRNL AUTH J.B.BRUNING,N.GAO,E.D.HERNANDEZ,H.LI,N.DANG,L.W.HUNG, JRNL AUTH 2 S.MORAN,J.C.SACCHETTINI JRNL TITL CRYSTAL STRUCTURE AND MECHANISM OF THE PROKARYOTIC ENOYL COA JRNL TITL 2 ISOMERASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.1_357 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 20850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 1077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.0748 - 3.5989 0.99 2725 135 0.1890 0.1997 REMARK 3 2 3.5989 - 2.8570 1.00 2572 123 0.1607 0.1936 REMARK 3 3 2.8570 - 2.4959 1.00 2502 144 0.1716 0.1962 REMARK 3 4 2.4959 - 2.2678 1.00 2460 163 0.1680 0.2236 REMARK 3 5 2.2678 - 2.1053 1.00 2480 124 0.1733 0.2579 REMARK 3 6 2.1053 - 1.9811 0.99 2446 140 0.1875 0.2132 REMARK 3 7 1.9811 - 1.8819 0.98 2409 128 0.2036 0.2536 REMARK 3 8 1.8819 - 1.8000 0.90 2179 120 0.2504 0.3032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 60.70 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.97040 REMARK 3 B22 (A**2) : -0.97040 REMARK 3 B33 (A**2) : 1.94090 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1810 REMARK 3 ANGLE : 1.050 2461 REMARK 3 CHIRALITY : 0.070 281 REMARK 3 PLANARITY : 0.016 313 REMARK 3 DIHEDRAL : 16.533 685 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 0:48) REMARK 3 ORIGIN FOR THE GROUP (A): -31.8027 2.4798 20.0045 REMARK 3 T TENSOR REMARK 3 T11: 0.1164 T22: 0.1670 REMARK 3 T33: 0.2047 T12: 0.0008 REMARK 3 T13: -0.0000 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.0324 L22: 0.7800 REMARK 3 L33: 0.2465 L12: -0.1163 REMARK 3 L13: 0.0230 L23: -0.0285 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: 0.0445 S13: -0.0219 REMARK 3 S21: 0.0060 S22: 0.0019 S23: 0.2846 REMARK 3 S31: -0.0248 S32: -0.1380 S33: -0.0088 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 49:81) REMARK 3 ORIGIN FOR THE GROUP (A): -26.5318 -10.9032 16.1126 REMARK 3 T TENSOR REMARK 3 T11: 0.1768 T22: 0.1441 REMARK 3 T33: 0.1565 T12: -0.0381 REMARK 3 T13: -0.0048 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.1862 L22: 0.0800 REMARK 3 L33: 0.1816 L12: -0.0466 REMARK 3 L13: 0.0672 L23: -0.0947 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: 0.0272 S13: -0.0720 REMARK 3 S21: -0.0763 S22: 0.0519 S23: 0.0436 REMARK 3 S31: 0.0796 S32: -0.0194 S33: -0.0646 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 82:177) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8590 -4.7340 20.5254 REMARK 3 T TENSOR REMARK 3 T11: 0.1165 T22: 0.1184 REMARK 3 T33: 0.1145 T12: 0.0017 REMARK 3 T13: -0.0036 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.0835 L22: 0.3319 REMARK 3 L33: 0.2208 L12: 0.0713 REMARK 3 L13: 0.0106 L23: -0.2342 REMARK 3 S TENSOR REMARK 3 S11: -0.0166 S12: 0.0052 S13: -0.0153 REMARK 3 S21: 0.0439 S22: 0.0111 S23: -0.0427 REMARK 3 S31: -0.0491 S32: 0.0217 S33: 0.0033 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 178:193) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8179 6.8614 33.7254 REMARK 3 T TENSOR REMARK 3 T11: 0.1643 T22: 0.1428 REMARK 3 T33: 0.0827 T12: -0.0050 REMARK 3 T13: 0.0104 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 0.4591 L22: 0.2496 REMARK 3 L33: 0.0224 L12: 0.0822 REMARK 3 L13: 0.0871 L23: 0.0057 REMARK 3 S TENSOR REMARK 3 S11: 0.0811 S12: -0.1368 S13: -0.0149 REMARK 3 S21: 0.0914 S22: -0.0592 S23: 0.0549 REMARK 3 S31: -0.0155 S32: -0.0606 S33: 0.0046 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 194:211) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7233 14.9924 15.3554 REMARK 3 T TENSOR REMARK 3 T11: 0.1537 T22: 0.1584 REMARK 3 T33: 0.1537 T12: 0.0108 REMARK 3 T13: -0.0182 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.4004 L22: 0.0256 REMARK 3 L33: 0.1265 L12: -0.0028 REMARK 3 L13: 0.1618 L23: -0.0403 REMARK 3 S TENSOR REMARK 3 S11: -0.0451 S12: 0.0182 S13: 0.1417 REMARK 3 S21: 0.0104 S22: 0.0456 S23: -0.0074 REMARK 3 S31: -0.0904 S32: -0.0022 S33: 0.0436 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 212:231) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7573 -6.7782 3.6374 REMARK 3 T TENSOR REMARK 3 T11: 0.2149 T22: 0.2173 REMARK 3 T33: 0.1089 T12: 0.0164 REMARK 3 T13: 0.0118 T23: -0.0325 REMARK 3 L TENSOR REMARK 3 L11: 0.2720 L22: 0.8382 REMARK 3 L33: 0.0189 L12: -0.0179 REMARK 3 L13: 0.0169 L23: -0.0887 REMARK 3 S TENSOR REMARK 3 S11: 0.0454 S12: 0.2798 S13: -0.0233 REMARK 3 S21: -0.4017 S22: -0.0371 S23: -0.1491 REMARK 3 S31: -0.0119 S32: -0.1046 S33: 0.0202 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FNB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073113. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK 9.9L REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20872 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 35.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 5.960 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.24 REMARK 200 R MERGE FOR SHELL (I) : 0.35100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4FN7 SUBUNIT A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 75.77850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 75.77850 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 75.77850 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 75.77850 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 75.77850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 75.77850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -106.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 303 LIES ON A SPECIAL POSITION. REMARK 375 O1 SO4 A 303 LIES ON A SPECIAL POSITION. REMARK 375 S SO4 A 304 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 539 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 575 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 609 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 617 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 71 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 550 O HOH A 564 2.06 REMARK 500 O HOH A 602 O HOH A 612 2.08 REMARK 500 NH1 ARG A 193 O HOH A 631 2.17 REMARK 500 O HOH A 587 O HOH A 600 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 625 O HOH A 630 8555 1.82 REMARK 500 O HOH A 613 O HOH A 615 2555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 11 -107.39 43.65 REMARK 500 LYS A 22 -118.46 -140.97 REMARK 500 ASN A 54 -163.14 -111.45 REMARK 500 ALA A 106 -122.66 57.46 REMARK 500 THR A 158 -76.18 -91.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3HC A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4FN7 RELATED DB: PDB REMARK 900 APO FORM OF ENZYME REMARK 900 RELATED ID: 4FN8 RELATED DB: PDB REMARK 900 ACETOACETYL BOUND FORM OF ENZYME REMARK 900 RELATED ID: 4FND RELATED DB: PDB REMARK 900 RELATED ID: RV0632C RELATED DB: TARGETTRACK DBREF 4FNB A 1 231 UNP P96907 P96907_MYCTU 1 231 SEQADV 4FNB SER A 0 UNP P96907 EXPRESSION TAG SEQRES 1 A 232 SER MET SER ASP PRO VAL SER TYR THR ARG LYS ASP SER SEQRES 2 A 232 ILE ALA VAL ILE SER MET ASP ASP GLY LYS VAL ASN ALA SEQRES 3 A 232 LEU GLY PRO ALA MET GLN GLN ALA LEU ASN ALA ALA ILE SEQRES 4 A 232 ASP ASN ALA ASP ARG ASP ASP VAL GLY ALA LEU VAL ILE SEQRES 5 A 232 THR GLY ASN GLY ARG VAL PHE SER GLY GLY PHE ASP LEU SEQRES 6 A 232 LYS ILE LEU THR SER GLY GLU VAL GLN PRO ALA ILE ASP SEQRES 7 A 232 MET LEU ARG GLY GLY PHE GLU LEU ALA TYR ARG LEU LEU SEQRES 8 A 232 SER TYR PRO LYS PRO VAL VAL MET ALA CYS THR GLY HIS SEQRES 9 A 232 ALA ILE ALA MET GLY ALA PHE LEU LEU SER CYS GLY ASP SEQRES 10 A 232 HIS ARG VAL ALA ALA HIS ALA TYR ASN ILE GLN ALA ASN SEQRES 11 A 232 GLU VAL ALA ILE GLY MET THR ILE PRO TYR ALA ALA LEU SEQRES 12 A 232 GLU ILE MET LYS LEU ARG LEU THR ARG SER ALA TYR GLN SEQRES 13 A 232 GLN ALA THR GLY LEU ALA LYS THR PHE PHE GLY GLU THR SEQRES 14 A 232 ALA LEU ALA ALA GLY PHE ILE ASP GLU ILE ALA LEU PRO SEQRES 15 A 232 GLU VAL VAL VAL SER ARG ALA GLU GLU ALA ALA ARG GLU SEQRES 16 A 232 PHE ALA GLY LEU ASN GLN HIS ALA HIS ALA ALA THR LYS SEQRES 17 A 232 LEU ARG SER ARG ALA ASP ALA LEU THR ALA ILE ARG ALA SEQRES 18 A 232 GLY ILE ASP GLY ILE ALA ALA GLU PHE GLY LEU HET SO4 A 301 5 HET 3HC A 302 54 HET SO4 A 303 5 HET SO4 A 304 5 HETNAM SO4 SULFATE ION HETNAM 3HC 3-HYDROXYBUTANOYL-COENZYME A HETSYN 3HC 3-HYDROXYBUTYRYL-COENZYME A FORMUL 2 SO4 3(O4 S 2-) FORMUL 3 3HC C25 H42 N7 O18 P3 S FORMUL 6 HOH *233(H2 O) HELIX 1 1 GLY A 27 ASP A 45 1 19 HELIX 2 2 ASP A 63 THR A 68 1 6 HELIX 3 3 GLU A 71 SER A 91 1 21 HELIX 4 4 ALA A 106 SER A 113 1 8 HELIX 5 5 ASN A 129 GLY A 134 1 6 HELIX 6 6 PRO A 138 LEU A 149 1 12 HELIX 7 7 THR A 150 LEU A 160 1 11 HELIX 8 8 PHE A 165 GLY A 173 1 9 HELIX 9 9 LEU A 180 GLU A 182 5 3 HELIX 10 10 VAL A 183 ALA A 196 1 14 HELIX 11 11 ASN A 199 SER A 210 1 12 HELIX 12 12 ARG A 211 GLY A 224 1 14 HELIX 13 13 GLY A 224 PHE A 229 1 6 SHEET 1 A 6 VAL A 5 LYS A 10 0 SHEET 2 A 6 ILE A 13 MET A 18 -1 O VAL A 15 N THR A 8 SHEET 3 A 6 ALA A 48 THR A 52 1 O VAL A 50 N ILE A 16 SHEET 4 A 6 VAL A 96 CYS A 100 1 O ALA A 99 N ILE A 51 SHEET 5 A 6 HIS A 117 ALA A 120 1 O VAL A 119 N CYS A 100 SHEET 6 A 6 GLU A 177 ILE A 178 1 O GLU A 177 N ALA A 120 SHEET 1 B 4 VAL A 57 SER A 59 0 SHEET 2 B 4 HIS A 103 ILE A 105 1 O HIS A 103 N PHE A 58 SHEET 3 B 4 ILE A 126 GLN A 127 1 O GLN A 127 N ALA A 104 SHEET 4 B 4 THR A 163 PHE A 164 -1 O PHE A 164 N ILE A 126 SITE 1 AC1 7 ASN A 40 ARG A 43 ASN A 199 GLN A 200 SITE 2 AC1 7 HIS A 201 HOH A 508 HOH A 578 SITE 1 AC2 20 SER A 2 LYS A 22 VAL A 23 ARG A 56 SITE 2 AC2 20 GLY A 60 PHE A 62 ASP A 63 LEU A 64 SITE 3 AC2 20 LEU A 67 ASN A 129 GLU A 130 ILE A 133 SITE 4 AC2 20 PRO A 138 HOH A 401 HOH A 412 HOH A 487 SITE 5 AC2 20 HOH A 562 HOH A 575 HOH A 588 HOH A 610 SITE 1 AC3 3 THR A 150 ARG A 151 HOH A 617 SITE 1 AC4 2 ARG A 9 HOH A 556 CRYST1 70.136 70.136 151.557 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014258 0.008232 0.000000 0.00000 SCALE2 0.000000 0.016464 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006598 0.00000