HEADER PROTEIN TRANSPORT 21-JUN-12 4FOZ TITLE CRYSTAL STRUCTURE OF OCCD1 (OPRD) Y282R/D307H COMPND MOL_ID: 1; COMPND 2 MOLECULE: PORIN D; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PORIN D; COMPND 5 SYNONYM: IMIPENEM/BASIC AMINO ACID-SPECIFIC OUTER MEMBRANE PORE, COMPND 6 OUTER MEMBRANE PROTEIN D2; COMPND 7 EC: 3.4.21.-; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: OPRD, PA0958; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-BARREL, BASIC AMINO ACID/IMIPENEM TRANSPORT, OUTER MEMBRANE, KEYWDS 2 PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR E.EREN,B.VAN DEN BERG REVDAT 4 28-FEB-24 4FOZ 1 REMARK SEQADV REVDAT 3 22-MAY-13 4FOZ 1 JRNL REVDAT 2 27-MAR-13 4FOZ 1 JRNL REVDAT 1 13-MAR-13 4FOZ 0 JRNL AUTH E.EREN,J.PARKIN,A.ADELANWA,B.CHENEKE,L.MOVILEANU,S.KHALID, JRNL AUTH 2 B.VAN DEN BERG JRNL TITL TOWARD UNDERSTANDING THE OUTER MEMBRANE UPTAKE OF SMALL JRNL TITL 2 MOLECULES BY PSEUDOMONAS AERUGINOSA. JRNL REF J.BIOL.CHEM. V. 288 12042 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23467408 JRNL DOI 10.1074/JBC.M113.463570 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 26345 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1579 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.9641 - 4.9390 0.99 2983 157 0.2078 0.2258 REMARK 3 2 4.9390 - 3.9439 0.99 2889 153 0.1826 0.2202 REMARK 3 3 3.9439 - 3.4523 0.65 1918 101 0.1896 0.2197 REMARK 3 4 3.4523 - 3.1399 0.98 2869 151 0.1876 0.2277 REMARK 3 5 3.1399 - 2.9166 0.98 2903 153 0.1854 0.2672 REMARK 3 6 2.9166 - 2.7457 0.98 2882 152 0.1899 0.2562 REMARK 3 7 2.7457 - 2.6090 0.98 2858 149 0.2080 0.2775 REMARK 3 8 2.6090 - 2.4960 0.98 2856 151 0.2352 0.2866 REMARK 3 9 2.4960 - 2.4003 0.97 2869 151 0.2641 0.3266 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 62.78 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.78390 REMARK 3 B22 (A**2) : 0.56150 REMARK 3 B33 (A**2) : -3.34540 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.26120 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3117 REMARK 3 ANGLE : 1.099 4174 REMARK 3 CHIRALITY : 0.076 427 REMARK 3 PLANARITY : 0.004 537 REMARK 3 DIHEDRAL : 18.146 1127 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 1:108) REMARK 3 ORIGIN FOR THE GROUP (A): -54.1001 10.2339 11.4647 REMARK 3 T TENSOR REMARK 3 T11: 0.3041 T22: 0.3307 REMARK 3 T33: 0.2937 T12: 0.0535 REMARK 3 T13: 0.0206 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 3.6606 L22: 1.0469 REMARK 3 L33: 2.7069 L12: 1.8645 REMARK 3 L13: 2.3455 L23: 1.7440 REMARK 3 S TENSOR REMARK 3 S11: -0.0308 S12: -0.3735 S13: -0.2035 REMARK 3 S21: -0.1687 S22: 0.0278 S23: -0.1106 REMARK 3 S31: -0.2975 S32: -0.1944 S33: -0.0664 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 109:182) REMARK 3 ORIGIN FOR THE GROUP (A): -56.3798 14.0971 -2.9730 REMARK 3 T TENSOR REMARK 3 T11: 0.2922 T22: 0.3739 REMARK 3 T33: 0.2860 T12: -0.0068 REMARK 3 T13: -0.0221 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.8623 L22: 0.5893 REMARK 3 L33: 1.6036 L12: 0.5627 REMARK 3 L13: -0.3915 L23: -0.5578 REMARK 3 S TENSOR REMARK 3 S11: -0.0943 S12: -0.1902 S13: -0.1633 REMARK 3 S21: 0.0837 S22: 0.1449 S23: -0.1392 REMARK 3 S31: -0.0596 S32: 0.0610 S33: -0.0914 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 183:420) REMARK 3 ORIGIN FOR THE GROUP (A): -36.8725 15.9492 -4.0706 REMARK 3 T TENSOR REMARK 3 T11: 0.2420 T22: 0.2079 REMARK 3 T33: 0.2276 T12: -0.0252 REMARK 3 T13: 0.0298 T23: -0.0507 REMARK 3 L TENSOR REMARK 3 L11: 1.1314 L22: 0.2586 REMARK 3 L33: 1.9704 L12: -0.3073 REMARK 3 L13: 0.3575 L23: -0.6320 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: 0.0588 S13: -0.1163 REMARK 3 S21: 0.0229 S22: 0.0714 S23: -0.0063 REMARK 3 S31: -0.0181 S32: 0.1231 S33: -0.0288 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FOZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073173. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26471 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 17.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.71600 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M (NH4)2SO4 (STRUCTURE SCREEN REMARK 280 1/#44), PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 74.22900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.38200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 74.22900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 52.38200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 32 REMARK 465 LYS A 33 REMARK 465 SER A 34 REMARK 465 GLY A 35 REMARK 465 SER A 36 REMARK 465 GLY A 37 REMARK 465 SER A 77 REMARK 465 ASP A 78 REMARK 465 LYS A 79 REMARK 465 THR A 80 REMARK 465 GLY A 81 REMARK 465 THR A 82 REMARK 465 MET A 88 REMARK 465 ASN A 89 REMARK 465 ASP A 90 REMARK 465 GLY A 91 REMARK 465 LYS A 92 REMARK 465 ALA A 127 REMARK 465 GLY A 128 REMARK 465 GLY A 129 REMARK 465 SER A 130 REMARK 465 GLY A 160 REMARK 465 LYS A 161 REMARK 465 GLU A 162 REMARK 465 PRO A 163 REMARK 465 THR A 164 REMARK 465 THR A 165 REMARK 465 VAL A 166 REMARK 465 LYS A 167 REMARK 465 SER A 168 REMARK 465 ARG A 169 REMARK 465 GLY A 170 REMARK 465 GLY A 286 REMARK 465 ARG A 287 REMARK 465 ASN A 288 REMARK 465 GLY A 289 REMARK 465 SER A 290 REMARK 465 GLY A 291 REMARK 465 ALA A 292 REMARK 465 GLY A 293 REMARK 465 GLY A 294 REMARK 465 ASP A 295 REMARK 465 SER A 296 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 11 CE NZ REMARK 470 ARG A 30 CD NE CZ NH1 NH2 REMARK 470 ARG A 39 CD NE CZ NH1 NH2 REMARK 470 GLN A 135 CD OE1 NE2 REMARK 470 GLU A 171 CB CG CD OE1 OE2 REMARK 470 LYS A 182 CE NZ REMARK 470 SER A 225 OG REMARK 470 LYS A 243 CE NZ REMARK 470 ARG A 282 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 314 NZ REMARK 470 LYS A 348 NZ REMARK 470 GLU A 369 O REMARK 470 LYS A 384 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 47 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 109 -107.54 52.83 REMARK 500 ILE A 209 -62.52 -122.47 REMARK 500 ASP A 226 24.65 -141.02 REMARK 500 ALA A 244 60.92 62.31 REMARK 500 ASP A 263 -116.37 53.01 REMARK 500 PHE A 298 -6.36 75.68 REMARK 500 VAL A 303 -161.55 -120.08 REMARK 500 TYR A 305 -62.40 -92.45 REMARK 500 VAL A 329 66.79 -119.75 REMARK 500 ALA A 383 31.10 -87.72 REMARK 500 ASP A 385 -14.20 82.18 REMARK 500 SER A 418 77.52 -158.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 501 REMARK 610 C8E A 502 REMARK 610 C8E A 503 REMARK 610 C8E A 504 REMARK 610 C8E A 505 REMARK 610 C8E A 506 REMARK 610 C8E A 507 REMARK 610 C8E A 508 REMARK 610 C8E A 509 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 509 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SY7 RELATED DB: PDB REMARK 900 OCCD1 (OPRD) WILD-TYPE PROTEIN STRUCTURE DBREF 4FOZ A 1 420 UNP P32722 PORD_PSEAE 24 443 SEQADV 4FOZ HIS A -5 UNP P32722 EXPRESSION TAG SEQADV 4FOZ HIS A -4 UNP P32722 EXPRESSION TAG SEQADV 4FOZ HIS A -3 UNP P32722 EXPRESSION TAG SEQADV 4FOZ HIS A -2 UNP P32722 EXPRESSION TAG SEQADV 4FOZ HIS A -1 UNP P32722 EXPRESSION TAG SEQADV 4FOZ HIS A 0 UNP P32722 EXPRESSION TAG SEQADV 4FOZ VAL A 258 UNP P32722 ALA 281 CLONING ARTIFACT SEQADV 4FOZ ARG A 282 UNP P32722 TYR 305 ENGINEERED MUTATION SEQADV 4FOZ HIS A 307 UNP P32722 ASP 330 ENGINEERED MUTATION SEQRES 1 A 426 HIS HIS HIS HIS HIS HIS ASP ALA PHE VAL SER ASP GLN SEQRES 2 A 426 ALA GLU ALA LYS GLY PHE ILE GLU ASP SER SER LEU ASP SEQRES 3 A 426 LEU LEU LEU ARG ASN TYR TYR PHE ASN ARG ASP GLY LYS SEQRES 4 A 426 SER GLY SER GLY ASP ARG VAL ASP TRP THR GLN GLY PHE SEQRES 5 A 426 LEU THR THR TYR GLU SER GLY PHE THR GLN GLY THR VAL SEQRES 6 A 426 GLY PHE GLY VAL ASP ALA PHE GLY TYR LEU GLY LEU LYS SEQRES 7 A 426 LEU ASP GLY THR SER ASP LYS THR GLY THR GLY ASN LEU SEQRES 8 A 426 PRO VAL MET ASN ASP GLY LYS PRO ARG ASP ASP TYR SER SEQRES 9 A 426 ARG ALA GLY GLY ALA VAL LYS VAL ARG ILE SER LYS THR SEQRES 10 A 426 MET LEU LYS TRP GLY GLU MET GLN PRO THR ALA PRO VAL SEQRES 11 A 426 PHE ALA ALA GLY GLY SER ARG LEU PHE PRO GLN THR ALA SEQRES 12 A 426 THR GLY PHE GLN LEU GLN SER SER GLU PHE GLU GLY LEU SEQRES 13 A 426 ASP LEU GLU ALA GLY HIS PHE THR GLU GLY LYS GLU PRO SEQRES 14 A 426 THR THR VAL LYS SER ARG GLY GLU LEU TYR ALA THR TYR SEQRES 15 A 426 ALA GLY GLU THR ALA LYS SER ALA ASP PHE ILE GLY GLY SEQRES 16 A 426 ARG TYR ALA ILE THR ASP ASN LEU SER ALA SER LEU TYR SEQRES 17 A 426 GLY ALA GLU LEU GLU ASP ILE TYR ARG GLN TYR TYR LEU SEQRES 18 A 426 ASN SER ASN TYR THR ILE PRO LEU ALA SER ASP GLN SER SEQRES 19 A 426 LEU GLY PHE ASP PHE ASN ILE TYR ARG THR ASN ASP GLU SEQRES 20 A 426 GLY LYS ALA LYS ALA GLY ASP ILE SER ASN THR THR TRP SEQRES 21 A 426 SER LEU ALA VAL ALA TYR THR LEU ASP ALA HIS THR PHE SEQRES 22 A 426 THR LEU ALA TYR GLN LYS VAL HIS GLY ASP GLN PRO PHE SEQRES 23 A 426 ASP ARG ILE GLY PHE GLY ARG ASN GLY SER GLY ALA GLY SEQRES 24 A 426 GLY ASP SER ILE PHE LEU ALA ASN SER VAL GLN TYR SER SEQRES 25 A 426 HIS PHE ASN GLY PRO GLY GLU LYS SER TRP GLN ALA ARG SEQRES 26 A 426 TYR ASP LEU ASN LEU ALA SER TYR GLY VAL PRO GLY LEU SEQRES 27 A 426 THR PHE MET VAL ARG TYR ILE ASN GLY LYS ASP ILE ASP SEQRES 28 A 426 GLY THR LYS MET SER ASP ASN ASN VAL GLY TYR LYS ASN SEQRES 29 A 426 TYR GLY TYR GLY GLU ASP GLY LYS HIS HIS GLU THR ASN SEQRES 30 A 426 LEU GLU ALA LYS TYR VAL VAL GLN SER GLY PRO ALA LYS SEQRES 31 A 426 ASP LEU SER PHE ARG ILE ARG GLN ALA TRP HIS ARG ALA SEQRES 32 A 426 ASN ALA ASP GLN GLY GLU GLY ASP GLN ASN GLU PHE ARG SEQRES 33 A 426 LEU ILE VAL ASP TYR PRO LEU SER ILE LEU HET C8E A 501 12 HET C8E A 502 13 HET C8E A 503 7 HET C8E A 504 16 HET C8E A 505 13 HET C8E A 506 15 HET C8E A 507 10 HET C8E A 508 13 HET C8E A 509 11 HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE FORMUL 2 C8E 9(C16 H34 O5) FORMUL 11 HOH *78(H2 O) HELIX 1 1 ASP A 6 ALA A 10 5 5 HELIX 2 2 ALA A 325 GLY A 328 5 4 HELIX 3 3 ASN A 353 ASN A 358 1 6 HELIX 4 4 ALA A 399 GLY A 402 5 4 SHEET 1 A22 LEU A 332 ILE A 344 0 SHEET 2 A22 GLY A 365 HIS A 368 -1 O HIS A 367 N GLY A 341 SHEET 3 A22 SER A 387 ALA A 397 -1 O ARG A 396 N HIS A 368 SHEET 4 A22 LEU A 332 ILE A 344 0 SHEET 5 A22 LYS A 314 ASN A 323 -1 N TYR A 320 O VAL A 336 SHEET 6 A22 HIS A 265 GLY A 276 -1 N THR A 268 O ARG A 319 SHEET 7 A22 SER A 250 LEU A 262 -1 N LEU A 262 O HIS A 265 SHEET 8 A22 GLN A 227 ASP A 240 -1 N TYR A 236 O THR A 253 SHEET 9 A22 TYR A 210 PRO A 222 -1 N ILE A 221 O LEU A 229 SHEET 10 A22 LEU A 197 LEU A 206 -1 N ALA A 204 O GLN A 212 SHEET 11 A22 SER A 183 ALA A 192 -1 N ILE A 187 O GLY A 203 SHEET 12 A22 LEU A 150 THR A 158 -1 N GLU A 153 O GLY A 188 SHEET 13 A22 ALA A 137 PHE A 147 -1 N LEU A 142 O ALA A 154 SHEET 14 A22 THR A 111 MET A 118 -1 N MET A 118 O ALA A 137 SHEET 15 A22 ASP A 96 ILE A 108 -1 N ILE A 108 O THR A 111 SHEET 16 A22 VAL A 59 GLY A 75 -1 N TYR A 68 O ARG A 99 SHEET 17 A22 ARG A 39 GLU A 51 -1 N PHE A 46 O LEU A 69 SHEET 18 A22 SER A 18 ARG A 30 -1 N ARG A 24 O GLY A 45 SHEET 19 A22 GLN A 406 PRO A 416 -1 O VAL A 413 N ASN A 25 SHEET 20 A22 SER A 387 ALA A 397 -1 N ARG A 389 O ILE A 412 SHEET 21 A22 ASN A 371 VAL A 377 -1 N LEU A 372 O GLN A 392 SHEET 22 A22 SER A 387 ALA A 397 -1 O GLN A 392 N LEU A 372 SHEET 1 B 3 GLU A 179 THR A 180 0 SHEET 2 B 3 TYR A 173 ALA A 174 -1 N ALA A 174 O GLU A 179 SHEET 3 B 3 ILE A 283 GLY A 284 -1 O GLY A 284 N TYR A 173 SITE 1 AC1 5 LEU A 256 VAL A 258 LEU A 269 TYR A 271 SITE 2 AC1 5 TRP A 316 SITE 1 AC2 4 ALA A 318 TYR A 320 VAL A 336 C8E A 503 SITE 1 AC3 1 C8E A 502 SITE 1 AC4 6 LEU A 23 TRP A 42 GLN A 44 PHE A 233 SITE 2 AC4 6 TRP A 254 TYR A 271 SITE 1 AC5 1 TYR A 376 SITE 1 AC6 8 LEU A 23 ASN A 25 GLN A 44 LEU A 197 SITE 2 AC6 8 TYR A 219 PRO A 382 VAL A 413 TYR A 415 SITE 1 AC7 2 ASN A 25 TRP A 42 SITE 1 AC8 5 THR A 48 LEU A 69 SER A 98 ARG A 99 SITE 2 AC8 5 ALA A 100 SITE 1 AC9 4 VAL A 63 GLY A 102 TRP A 115 GLY A 116 CRYST1 148.458 104.764 47.355 90.00 98.55 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006736 0.000000 0.001013 0.00000 SCALE2 0.000000 0.009545 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021354 0.00000