HEADER TRANSPORT PROTEIN 26-JUN-12 4FRX TITLE CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OCCK8 (OPRE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANAEROBICALLY-INDUCED OUTER MEMBRANE PORIN OPRE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: OPRE, PA0291; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-BARREL, TRANSPORTER (PORIN), OUTER MEMBRANE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.EREN,B.VAN DEN BERG REVDAT 2 13-SEP-23 4FRX 1 REMARK SEQADV REVDAT 1 24-JUL-13 4FRX 0 JRNL AUTH E.EREN,B.VAN DEN BERG JRNL TITL CRYSTAL STRUCTURES OF OCCK SUBFAMILY PROTEINS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 99141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.9931 - 4.5396 1.00 7103 150 0.2492 0.2594 REMARK 3 2 4.5396 - 3.6199 1.00 7019 142 0.2091 0.2476 REMARK 3 3 3.6199 - 3.1672 1.00 7024 149 0.2015 0.2142 REMARK 3 4 3.1672 - 2.8799 1.00 6979 146 0.2179 0.2528 REMARK 3 5 2.8799 - 2.6747 1.00 6979 139 0.2088 0.2430 REMARK 3 6 2.6747 - 2.5178 1.00 6969 140 0.2191 0.2346 REMARK 3 7 2.5178 - 2.3922 0.99 6929 153 0.2059 0.2780 REMARK 3 8 2.3922 - 2.2885 0.99 6854 140 0.2098 0.2498 REMARK 3 9 2.2885 - 2.2007 0.99 6945 133 0.2027 0.2547 REMARK 3 10 2.2007 - 2.1249 0.99 6857 150 0.1984 0.2383 REMARK 3 11 2.1249 - 2.0587 0.99 6891 138 0.2018 0.2504 REMARK 3 12 2.0587 - 2.0000 0.99 6853 140 0.2081 0.2601 REMARK 3 13 2.0000 - 1.9474 0.99 6904 133 0.2090 0.2506 REMARK 3 14 1.9474 - 1.9000 0.99 6841 141 0.2186 0.2505 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : 0.44 REMARK 3 B_SOL : 54.34 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.16310 REMARK 3 B22 (A**2) : -1.17160 REMARK 3 B33 (A**2) : 3.33470 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.67080 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6387 REMARK 3 ANGLE : 1.137 8605 REMARK 3 CHIRALITY : 0.084 906 REMARK 3 PLANARITY : 0.005 1121 REMARK 3 DIHEDRAL : 15.455 2261 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 31.2622 -6.8936 74.2133 REMARK 3 T TENSOR REMARK 3 T11: 0.0218 T22: 0.0233 REMARK 3 T33: 0.0269 T12: -0.0204 REMARK 3 T13: 0.0002 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.0093 L22: 0.0231 REMARK 3 L33: 0.0183 L12: 0.0109 REMARK 3 L13: -0.0027 L23: 0.0192 REMARK 3 S TENSOR REMARK 3 S11: -0.0169 S12: 0.0054 S13: -0.0008 REMARK 3 S21: -0.0029 S22: -0.0020 S23: 0.0011 REMARK 3 S31: -0.0026 S32: 0.0065 S33: -0.0199 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FRX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073279. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.10 REMARK 200 MONOCHROMATOR : DOUBLE SILICON(111) CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99602 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11800 REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.55300 REMARK 200 FOR SHELL : 1.930 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3SYS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 400, 0.2M AMMONIUM SULPHATE, REMARK 280 0.05M HEPES, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 69.19300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.06050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 69.19300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.06050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 643 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 655 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 ASN A 24 REMARK 465 GLY A 25 REMARK 465 THR A 26 REMARK 465 ALA A 27 REMARK 465 SER A 28 REMARK 465 PRO A 29 REMARK 465 ASP A 67 REMARK 465 GLY A 68 REMARK 465 GLY A 69 REMARK 465 GLY A 70 REMARK 465 ARG A 71 REMARK 465 ALA A 72 REMARK 465 GLY A 73 REMARK 465 LYS A 74 REMARK 465 SER A 75 REMARK 465 GLY A 76 REMARK 465 LEU A 77 REMARK 465 ASP A 78 REMARK 465 ARG A 79 REMARK 465 GLN A 80 REMARK 465 PRO A 81 REMARK 465 LEU A 405 REMARK 465 PRO A 406 REMARK 465 ALA A 407 REMARK 465 ALA A 408 REMARK 465 GLY A 409 REMARK 465 SER A 410 REMARK 465 SER A 411 REMARK 465 ASN A 412 REMARK 465 ASN A 413 REMARK 465 GLN A 414 REMARK 465 ARG A 415 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 GLY B 25 REMARK 465 THR B 26 REMARK 465 ALA B 27 REMARK 465 SER B 28 REMARK 465 PRO B 29 REMARK 465 ASP B 67 REMARK 465 GLY B 68 REMARK 465 GLY B 69 REMARK 465 GLY B 70 REMARK 465 ARG B 71 REMARK 465 ALA B 72 REMARK 465 GLY B 73 REMARK 465 LYS B 74 REMARK 465 SER B 75 REMARK 465 GLY B 76 REMARK 465 LEU B 77 REMARK 465 ASP B 78 REMARK 465 ARG B 79 REMARK 465 GLN B 80 REMARK 465 PRO B 81 REMARK 465 LEU B 405 REMARK 465 PRO B 406 REMARK 465 ALA B 407 REMARK 465 ALA B 408 REMARK 465 GLY B 409 REMARK 465 SER B 410 REMARK 465 SER B 411 REMARK 465 ASN B 412 REMARK 465 ASN B 413 REMARK 465 GLN B 414 REMARK 465 ARG B 415 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 5 CD OE1 OE2 REMARK 470 LYS A 8 CD CE NZ REMARK 470 ARG A 23 CD NE CZ NH1 NH2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 GLN A 32 CD OE1 NE2 REMARK 470 GLN A 49 CD OE1 NE2 REMARK 470 SER A 89 OG REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 LYS A 148 CE NZ REMARK 470 GLU A 158 CD OE1 OE2 REMARK 470 LYS A 188 CE NZ REMARK 470 LYS A 200 CE NZ REMARK 470 LYS A 216 CD CE NZ REMARK 470 ARG A 251 CZ NH1 NH2 REMARK 470 LYS A 363 CE NZ REMARK 470 GLU B 5 CD OE1 OE2 REMARK 470 LYS B 8 CE NZ REMARK 470 ARG B 23 NE CZ NH1 NH2 REMARK 470 ASN B 24 CG OD1 ND2 REMARK 470 LYS B 31 CG CD CE NZ REMARK 470 GLN B 32 CD OE1 NE2 REMARK 470 GLU B 92 CG CD OE1 OE2 REMARK 470 LYS B 148 CE NZ REMARK 470 GLU B 158 CD OE1 OE2 REMARK 470 LYS B 188 CD CE NZ REMARK 470 LYS B 197 CD CE NZ REMARK 470 LYS B 200 CD CE NZ REMARK 470 LYS B 216 CE NZ REMARK 470 ARG B 251 CZ NH1 NH2 REMARK 470 LYS B 363 CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 5 CG REMARK 480 GLU B 5 CG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 376 O HOH A 689 2.03 REMARK 500 O HOH A 834 O HOH A 879 2.15 REMARK 500 O ALA A 9 O HOH A 873 2.16 REMARK 500 OD1 ASN B 42 O HOH B 881 2.17 REMARK 500 NZ LYS B 247 O HOH B 817 2.19 REMARK 500 O HOH B 728 O HOH B 820 2.19 REMARK 500 O HOH A 696 O HOH A 816 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O PHE B 240 O HOH B 784 4557 1.90 REMARK 500 O PHE A 240 O HOH A 822 4546 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 9 -144.49 -116.87 REMARK 500 SER A 10 137.49 155.58 REMARK 500 ASN A 90 -70.54 -40.11 REMARK 500 SER A 109 -115.06 57.60 REMARK 500 VAL A 125 118.92 -168.00 REMARK 500 ASP A 129 46.56 -143.52 REMARK 500 ARG A 131 -129.07 -129.17 REMARK 500 ASN A 199 -166.97 -161.63 REMARK 500 PHE A 214 -62.46 -123.84 REMARK 500 ASP A 274 82.08 -175.52 REMARK 500 ASN A 308 101.29 -161.95 REMARK 500 VAL A 323 -159.77 -123.96 REMARK 500 ILE A 325 -61.61 -108.57 REMARK 500 ASN B 90 -81.76 -33.78 REMARK 500 SER B 109 -117.07 53.97 REMARK 500 VAL B 125 118.58 -167.69 REMARK 500 ASP B 129 48.33 -140.69 REMARK 500 ARG B 131 -130.99 -126.62 REMARK 500 ASP B 149 -0.50 75.41 REMARK 500 ASN B 177 -159.88 -92.99 REMARK 500 PHE B 214 -63.51 -122.79 REMARK 500 ASP B 274 86.12 -170.63 REMARK 500 ASN B 308 101.11 -165.24 REMARK 500 VAL B 323 -153.71 -120.90 REMARK 500 VAL B 349 71.56 -117.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 501 REMARK 610 C8E A 502 REMARK 610 C8E A 503 REMARK 610 C8E A 504 REMARK 610 C8E A 505 REMARK 610 C8E B 501 REMARK 610 C8E B 502 REMARK 610 C8E B 503 REMARK 610 C8E B 504 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SYS RELATED DB: PDB REMARK 900 RELATED ID: 3SY7 RELATED DB: PDB DBREF 4FRX A 1 431 UNP G3XDA5 G3XDA5_PSEAE 30 460 DBREF 4FRX B 1 431 UNP G3XDA5 G3XDA5_PSEAE 30 460 SEQADV 4FRX HIS A -5 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS A -4 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS A -3 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS A -2 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS A -1 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS A 0 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS B -5 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS B -4 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS B -3 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS B -2 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS B -1 UNP G3XDA5 EXPRESSION TAG SEQADV 4FRX HIS B 0 UNP G3XDA5 EXPRESSION TAG SEQRES 1 A 437 HIS HIS HIS HIS HIS HIS ALA GLY PHE ILE GLU ASP SER SEQRES 2 A 437 LYS ALA SER LEU THR LEU ARG ASN PHE TYR ILE ASN THR SEQRES 3 A 437 ASP ASN ARG ASN GLY THR ALA SER PRO SER LYS GLN GLU SEQRES 4 A 437 GLU TRP GLY GLN GLY PHE ILE LEU ASN TYR GLN SER GLY SEQRES 5 A 437 PHE THR GLN GLY THR VAL GLY PHE GLY VAL ASP ALA LEU SEQRES 6 A 437 GLY LEU LEU GLY VAL ARG LEU ASP GLY GLY GLY ARG ALA SEQRES 7 A 437 GLY LYS SER GLY LEU ASP ARG GLN PRO GLY THR VAL PHE SEQRES 8 A 437 PRO LEU GLU SER ASN GLY GLU PRO VAL HIS ASP PHE ALA SEQRES 9 A 437 SER LEU GLY LEU THR ALA LYS ALA LYS VAL SER ASN THR SEQRES 10 A 437 GLU PHE ARG TYR GLY THR LEU GLN PRO LYS LEU PRO VAL SEQRES 11 A 437 VAL THR TYR ASN ASP GLY ARG LEU LEU PRO VAL THR PHE SEQRES 12 A 437 GLU GLY GLY GLN VAL THR SER THR ASP LEU LYS ASP PHE SEQRES 13 A 437 THR LEU VAL ALA GLY GLN LEU GLU HIS SER LYS GLY ARG SEQRES 14 A 437 ASN SER THR ASP ASN ARG SER LEU SER ILE ALA GLY ALA SEQRES 15 A 437 ASN GLY SER SER ALA SER SER ARG ASP SER ASN LYS PHE SEQRES 16 A 437 TYR TYR ALA GLY GLY ASP TYR LYS VAL ASN LYS ASP LEU SEQRES 17 A 437 THR LEU GLN TYR TYR TYR GLY ASN LEU ASP ASP PHE TYR SEQRES 18 A 437 LYS GLN HIS PHE LEU GLY LEU ILE HIS ASN TRP GLN ILE SEQRES 19 A 437 GLY PRO GLY VAL LEU LYS THR ASP LEU ARG ALA PHE ASP SEQRES 20 A 437 SER SER SER ASP GLY LYS ASN GLY SER ARG SER GLY ARG SEQRES 21 A 437 ALA ASP GLY TYR VAL SER SER GLY TYR TYR GLY SER GLY SEQRES 22 A 437 VAL THR LYS GLY GLU VAL ASP ASN ARG ALA PHE SER GLY SEQRES 23 A 437 LEU PHE THR TYR THR VAL SER GLY HIS SER ILE GLY ALA SEQRES 24 A 437 GLY TYR GLN ILE LEU ASN GLY ASP SER ASP PHE PRO PHE SEQRES 25 A 437 LEU ASN ARG GLY ASP GLY GLU GLY SER THR ALA TYR LEU SEQRES 26 A 437 ILE THR ASP VAL GLN ILE GLY LYS PHE GLN ARG ALA GLY SEQRES 27 A 437 GLU ARG THR TRP GLN VAL ARG TYR GLY TYR ASP PHE ALA SEQRES 28 A 437 THR VAL GLY VAL PRO GLY LEU THR PHE ASN THR ILE TYR SEQRES 29 A 437 LEU SER GLY ASP LYS ILE LYS THR ALA ARG GLY ASP GLN SEQRES 30 A 437 SER GLU TRP GLU ARG ASP ILE SER LEU ALA TYR VAL ILE SEQRES 31 A 437 PRO ASP GLY THR PHE LYS GLY LEU GLY PHE THR TRP LYS SEQRES 32 A 437 ASN ALA SER PHE ARG SER GLY LEU PRO ALA ALA GLY SER SEQRES 33 A 437 SER ASN ASN GLN ARG ASP GLN ASP GLU ASN ARG LEU ILE SEQRES 34 A 437 VAL SER TYR THR LEU PRO LEU LEU SEQRES 1 B 437 HIS HIS HIS HIS HIS HIS ALA GLY PHE ILE GLU ASP SER SEQRES 2 B 437 LYS ALA SER LEU THR LEU ARG ASN PHE TYR ILE ASN THR SEQRES 3 B 437 ASP ASN ARG ASN GLY THR ALA SER PRO SER LYS GLN GLU SEQRES 4 B 437 GLU TRP GLY GLN GLY PHE ILE LEU ASN TYR GLN SER GLY SEQRES 5 B 437 PHE THR GLN GLY THR VAL GLY PHE GLY VAL ASP ALA LEU SEQRES 6 B 437 GLY LEU LEU GLY VAL ARG LEU ASP GLY GLY GLY ARG ALA SEQRES 7 B 437 GLY LYS SER GLY LEU ASP ARG GLN PRO GLY THR VAL PHE SEQRES 8 B 437 PRO LEU GLU SER ASN GLY GLU PRO VAL HIS ASP PHE ALA SEQRES 9 B 437 SER LEU GLY LEU THR ALA LYS ALA LYS VAL SER ASN THR SEQRES 10 B 437 GLU PHE ARG TYR GLY THR LEU GLN PRO LYS LEU PRO VAL SEQRES 11 B 437 VAL THR TYR ASN ASP GLY ARG LEU LEU PRO VAL THR PHE SEQRES 12 B 437 GLU GLY GLY GLN VAL THR SER THR ASP LEU LYS ASP PHE SEQRES 13 B 437 THR LEU VAL ALA GLY GLN LEU GLU HIS SER LYS GLY ARG SEQRES 14 B 437 ASN SER THR ASP ASN ARG SER LEU SER ILE ALA GLY ALA SEQRES 15 B 437 ASN GLY SER SER ALA SER SER ARG ASP SER ASN LYS PHE SEQRES 16 B 437 TYR TYR ALA GLY GLY ASP TYR LYS VAL ASN LYS ASP LEU SEQRES 17 B 437 THR LEU GLN TYR TYR TYR GLY ASN LEU ASP ASP PHE TYR SEQRES 18 B 437 LYS GLN HIS PHE LEU GLY LEU ILE HIS ASN TRP GLN ILE SEQRES 19 B 437 GLY PRO GLY VAL LEU LYS THR ASP LEU ARG ALA PHE ASP SEQRES 20 B 437 SER SER SER ASP GLY LYS ASN GLY SER ARG SER GLY ARG SEQRES 21 B 437 ALA ASP GLY TYR VAL SER SER GLY TYR TYR GLY SER GLY SEQRES 22 B 437 VAL THR LYS GLY GLU VAL ASP ASN ARG ALA PHE SER GLY SEQRES 23 B 437 LEU PHE THR TYR THR VAL SER GLY HIS SER ILE GLY ALA SEQRES 24 B 437 GLY TYR GLN ILE LEU ASN GLY ASP SER ASP PHE PRO PHE SEQRES 25 B 437 LEU ASN ARG GLY ASP GLY GLU GLY SER THR ALA TYR LEU SEQRES 26 B 437 ILE THR ASP VAL GLN ILE GLY LYS PHE GLN ARG ALA GLY SEQRES 27 B 437 GLU ARG THR TRP GLN VAL ARG TYR GLY TYR ASP PHE ALA SEQRES 28 B 437 THR VAL GLY VAL PRO GLY LEU THR PHE ASN THR ILE TYR SEQRES 29 B 437 LEU SER GLY ASP LYS ILE LYS THR ALA ARG GLY ASP GLN SEQRES 30 B 437 SER GLU TRP GLU ARG ASP ILE SER LEU ALA TYR VAL ILE SEQRES 31 B 437 PRO ASP GLY THR PHE LYS GLY LEU GLY PHE THR TRP LYS SEQRES 32 B 437 ASN ALA SER PHE ARG SER GLY LEU PRO ALA ALA GLY SER SEQRES 33 B 437 SER ASN ASN GLN ARG ASP GLN ASP GLU ASN ARG LEU ILE SEQRES 34 B 437 VAL SER TYR THR LEU PRO LEU LEU HET C8E A 501 13 HET C8E A 502 9 HET C8E A 503 11 HET C8E A 504 11 HET C8E A 505 18 HET C8E B 501 10 HET C8E B 502 11 HET C8E B 503 16 HET C8E B 504 15 HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE FORMUL 3 C8E 9(C16 H34 O5) FORMUL 12 HOH *574(H2 O) HELIX 1 1 GLY A 246 GLY A 249 5 4 HELIX 2 2 SER A 250 ASP A 256 1 7 HELIX 3 3 ALA A 345 GLY A 348 5 4 HELIX 4 4 GLY B 246 GLY B 249 5 4 HELIX 5 5 SER B 250 ASP B 256 1 7 HELIX 6 6 ALA B 345 GLY B 348 5 4 SHEET 1 A20 ASN A 168 SER A 170 0 SHEET 2 A20 PHE A 150 LYS A 161 -1 N SER A 160 O ARG A 169 SHEET 3 A20 PHE A 189 LYS A 197 -1 O PHE A 189 N LEU A 157 SHEET 4 A20 LEU A 202 LEU A 211 -1 O LEU A 204 N TYR A 196 SHEET 5 A20 TYR A 215 ILE A 228 -1 O GLN A 217 N GLY A 209 SHEET 6 A20 GLY A 231 SER A 244 -1 O GLY A 231 N ILE A 228 SHEET 7 A20 ASP A 274 VAL A 286 -1 O ASN A 275 N SER A 242 SHEET 8 A20 HIS A 289 ASN A 299 -1 O ILE A 291 N TYR A 284 SHEET 9 A20 ARG A 334 ASP A 343 -1 O ARG A 339 N GLY A 292 SHEET 10 A20 LEU A 352 ILE A 364 -1 O THR A 356 N TYR A 340 SHEET 11 A20 GLN A 371 VAL A 383 -1 O GLU A 373 N GLY A 361 SHEET 12 A20 GLY A 393 GLY A 404 -1 O TRP A 396 N LEU A 380 SHEET 13 A20 GLN A 417 LEU A 428 -1 O SER A 425 N GLY A 393 SHEET 14 A20 LEU A 11 ASN A 22 -1 N ASN A 15 O VAL A 424 SHEET 15 A20 LYS A 31 GLN A 44 -1 O ILE A 40 N THR A 12 SHEET 16 A20 GLY A 53 ARG A 65 -1 O GLY A 60 N LEU A 41 SHEET 17 A20 ASP A 96 VAL A 108 -1 O THR A 103 N ASP A 57 SHEET 18 A20 THR A 111 LEU A 118 -1 O PHE A 113 N ALA A 106 SHEET 19 A20 THR A 136 SER A 144 -1 O GLN A 141 N ARG A 114 SHEET 20 A20 PHE A 150 LYS A 161 -1 O ALA A 154 N VAL A 142 SHEET 1 B 2 LYS A 121 LEU A 122 0 SHEET 2 B 2 VAL A 125 THR A 126 -1 O VAL A 125 N LEU A 122 SHEET 1 C 2 SER A 260 SER A 261 0 SHEET 2 C 2 LYS A 270 GLY A 271 -1 O GLY A 271 N SER A 260 SHEET 1 D20 ASN B 168 SER B 170 0 SHEET 2 D20 PHE B 150 LYS B 161 -1 N SER B 160 O ARG B 169 SHEET 3 D20 PHE B 189 LYS B 197 -1 O PHE B 189 N LEU B 157 SHEET 4 D20 LEU B 202 LEU B 211 -1 O LEU B 204 N TYR B 196 SHEET 5 D20 TYR B 215 ILE B 228 -1 O GLN B 217 N GLY B 209 SHEET 6 D20 GLY B 231 SER B 244 -1 O LEU B 233 N TRP B 226 SHEET 7 D20 ASP B 274 VAL B 286 -1 O ASN B 275 N SER B 242 SHEET 8 D20 HIS B 289 ASN B 299 -1 O ILE B 291 N TYR B 284 SHEET 9 D20 ARG B 334 ASP B 343 -1 O THR B 335 N GLN B 296 SHEET 10 D20 LEU B 352 ILE B 364 -1 O TYR B 358 N VAL B 338 SHEET 11 D20 GLN B 371 VAL B 383 -1 O GLU B 373 N GLY B 361 SHEET 12 D20 GLY B 393 GLY B 404 -1 O PHE B 394 N TYR B 382 SHEET 13 D20 GLN B 417 PRO B 429 -1 O GLN B 417 N PHE B 401 SHEET 14 D20 LYS B 8 ASN B 22 -1 N ASN B 15 O VAL B 424 SHEET 15 D20 LYS B 31 GLN B 44 -1 O GLY B 38 N ARG B 14 SHEET 16 D20 GLY B 53 ARG B 65 -1 O ALA B 58 N TYR B 43 SHEET 17 D20 ASP B 96 VAL B 108 -1 O LYS B 107 N GLY B 53 SHEET 18 D20 THR B 111 LEU B 118 -1 O PHE B 113 N ALA B 106 SHEET 19 D20 THR B 136 SER B 144 -1 O PHE B 137 N LEU B 118 SHEET 20 D20 PHE B 150 LYS B 161 -1 O ALA B 154 N VAL B 142 SHEET 1 E 2 LYS B 121 LEU B 122 0 SHEET 2 E 2 VAL B 125 THR B 126 -1 O VAL B 125 N LEU B 122 SHEET 1 F 2 SER B 260 SER B 261 0 SHEET 2 F 2 LYS B 270 GLY B 271 -1 O GLY B 271 N SER B 260 SITE 1 AC1 6 ARG A 65 PHE A 150 TYR A 196 LEU A 204 SITE 2 AC1 6 GLN A 205 TYR A 206 SITE 1 AC2 3 PHE A 39 LEU A 61 SER A 99 SITE 1 AC3 3 PHE A 354 VAL B 52 C8E B 504 SITE 1 AC4 9 LYS A 8 ALA A 9 SER A 10 GLY A 221 SITE 2 AC4 9 LEU A 222 LEU A 428 PRO A 429 LEU A 430 SITE 3 AC4 9 LEU A 431 SITE 1 AC5 4 PHE A 54 GLY A 55 ALA A 104 TYR A 115 SITE 1 AC6 4 PHE B 39 LEU B 222 HIS B 224 TRP B 226 SITE 1 AC7 3 ASN B 19 TRP B 396 ASN B 420 SITE 1 AC8 2 PHE B 150 LEU B 222 SITE 1 AC9 7 C8E A 503 ALA B 104 ARG B 114 GLY B 140 SITE 2 AC9 7 GLN B 141 TYR B 190 TYR B 191 CRYST1 138.386 90.121 103.598 90.00 92.51 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007226 0.000000 0.000317 0.00000 SCALE2 0.000000 0.011096 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009662 0.00000