HEADER    TRANSFERASE                             29-JUN-12   4FVM              
TITLE     CRYSTAL STRUCTURE OF YEAST DNA POLYMERASE ALPHA                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE ALPHA CATALYTIC SUBUNIT A;                  
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: POLYMERASE DOMAIN, UNP RESIDUES 349-1258;                  
COMPND   5 SYNONYM: DNA POLYMERASE I SUBUNIT A, DNA POLYMERASE ALPHA:PRIMASE    
COMPND   6 COMPLEX P180 SUBUNIT, DNA POLYMERASE-PRIMASE COMPLEX P180 SUBUNIT,   
COMPND   7 POL ALPHA-PRIMASE COMPLEX P180 SUBUNIT;                              
COMPND   8 EC: 2.7.7.7;                                                         
COMPND   9 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;                       
SOURCE   3 ORGANISM_COMMON: BAKER'S YEAST;                                      
SOURCE   4 ORGANISM_TAXID: 559292;                                              
SOURCE   5 STRAIN: ATCC 204508 / S288C;                                         
SOURCE   6 GENE: CDC17, N2181, POL1, YNL102W;                                   
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)ROSETTA2;                         
SOURCE  10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  11 EXPRESSION_SYSTEM_PLASMID: PRSFDUET-1                                
KEYWDS    DNA POLYMERASE, DNA REPLICATION, TRANSFERASE                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.L.PERERA,L.PELLEGRINI                                               
REVDAT   4   13-SEP-23 4FVM    1       REMARK                                   
REVDAT   3   15-JAN-14 4FVM    1       JRNL                                     
REVDAT   2   24-APR-13 4FVM    1       JRNL                                     
REVDAT   1   27-FEB-13 4FVM    0                                                
JRNL        AUTH   R.L.PERERA,R.TORELLA,S.KLINGE,M.L.KILKENNY,J.D.MAMAN,        
JRNL        AUTH 2 L.PELLEGRINI                                                 
JRNL        TITL   MECHANISM FOR PRIMING DNA SYNTHESIS BY YEAST DNA POLYMERASE  
JRNL        TITL 2 ALPHA                                                        
JRNL        REF    ELIFE                         V.   2 00482 2013              
JRNL        REFN                   ESSN 2050-084X                               
JRNL        PMID   23599895                                                     
JRNL        DOI    10.7554/ELIFE.00482                                          
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.30 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE: DEV_1078)                     
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 36.51                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.9                           
REMARK   3   NUMBER OF REFLECTIONS             : 58809                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.207                           
REMARK   3   R VALUE            (WORKING SET) : 0.205                           
REMARK   3   FREE R VALUE                     : 0.236                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.050                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2970                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 36.5168 -  6.3350    0.93     2573   131  0.1887 0.2110        
REMARK   3     2  6.3350 -  5.0325    1.00     2691   151  0.1916 0.2183        
REMARK   3     3  5.0325 -  4.3975    1.00     2678   170  0.1603 0.1730        
REMARK   3     4  4.3975 -  3.9960    1.00     2681   150  0.1769 0.2037        
REMARK   3     5  3.9960 -  3.7099    1.00     2660   162  0.1977 0.2369        
REMARK   3     6  3.7099 -  3.4914    0.99     2701   131  0.2018 0.2331        
REMARK   3     7  3.4914 -  3.3166    1.00     2664   149  0.2145 0.2489        
REMARK   3     8  3.3166 -  3.1723    1.00     2685   148  0.2149 0.2451        
REMARK   3     9  3.1723 -  3.0503    0.99     2646   161  0.2254 0.2824        
REMARK   3    10  3.0503 -  2.9451    0.99     2650   133  0.2158 0.2295        
REMARK   3    11  2.9451 -  2.8530    1.00     2667   152  0.2054 0.2512        
REMARK   3    12  2.8530 -  2.7715    0.99     2683   136  0.2098 0.2643        
REMARK   3    13  2.7715 -  2.6986    0.99     2665   131  0.2162 0.3019        
REMARK   3    14  2.6986 -  2.6327    0.99     2660   152  0.2265 0.2766        
REMARK   3    15  2.6327 -  2.5729    0.99     2622   124  0.2385 0.2703        
REMARK   3    16  2.5729 -  2.5182    0.99     2667   155  0.2434 0.2884        
REMARK   3    17  2.5182 -  2.4678    0.98     2645   118  0.2566 0.2887        
REMARK   3    18  2.4678 -  2.4212    0.99     2654   137  0.2690 0.3339        
REMARK   3    19  2.4212 -  2.3780    0.99     2671   126  0.2764 0.3253        
REMARK   3    20  2.3780 -  2.3377    0.99     2628   122  0.3049 0.3147        
REMARK   3    21  2.3377 -  2.3000    0.98     2648   131  0.3153 0.3753        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.260            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.370           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 42.31                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.002           6812                                  
REMARK   3   ANGLE     :  0.586           9222                                  
REMARK   3   CHIRALITY :  0.037           1047                                  
REMARK   3   PLANARITY :  0.002           1196                                  
REMARK   3   DIHEDRAL  : 12.140           2630                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: FOR REFINEMENT, REFMAC, BUSTER AND        
REMARK   3  PHENIX WERE USED. THE STRUCTURE WAS REFINED WITH RIDING             
REMARK   3  HYDROGENS. THE HYDROGENS OF THE LAST REFINEMENT RUN ARE INCLUDED.   
REMARK   4                                                                      
REMARK   4 4FVM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-12.                  
REMARK 100 THE DEPOSITION ID IS D_1000073411.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 12-MAR-09                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 9.4                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID23-1                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9754                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : MOSFLM                             
REMARK 200  DATA SCALING SOFTWARE          : SCALA                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 58906                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.300                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 53.510                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.3                               
REMARK 200  DATA REDUNDANCY                : 6.000                              
REMARK 200  R MERGE                    (I) : 0.08500                            
REMARK 200  R SYM                      (I) : 0.08500                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 11.3000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.42                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.1                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 6.00                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.51200                            
REMARK 200  R SYM FOR SHELL            (I) : 0.51200                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.000                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: PDB ENTRY 4B08                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 62.65                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.29                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BICINE, 6% PEG8000, PH 9.4, VAPOR   
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 291K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       63.57000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ARG A   677                                                      
REMARK 465     GLY A   678                                                      
REMARK 465     GLU A   816                                                      
REMARK 465     GLY A   817                                                      
REMARK 465     ASN A   818                                                      
REMARK 465     ARG A   819                                                      
REMARK 465     SER A   820                                                      
REMARK 465     ARG A   821                                                      
REMARK 465     ALA A   822                                                      
REMARK 465     GLN A   823                                                      
REMARK 465     LYS A   824                                                      
REMARK 465     GLN A   825                                                      
REMARK 465     ARG A   826                                                      
REMARK 465     GLN A   827                                                      
REMARK 465     ASN A   828                                                      
REMARK 465     GLU A   829                                                      
REMARK 465     GLU A   830                                                      
REMARK 465     ASN A   831                                                      
REMARK 465     ALA A   832                                                      
REMARK 465     ASP A   833                                                      
REMARK 465     ALA A   834                                                      
REMARK 465     PRO A   835                                                      
REMARK 465     VAL A   836                                                      
REMARK 465     ASN A   837                                                      
REMARK 465     SER A   838                                                      
REMARK 465     LYS A   839                                                      
REMARK 465     LYS A   840                                                      
REMARK 465     ALA A   841                                                      
REMARK 465     LYS A   842                                                      
REMARK 465     TYR A   843                                                      
REMARK 465     GLN A   844                                                      
REMARK 465     GLY A   845                                                      
REMARK 465     GLY A   846                                                      
REMARK 465     LEU A   847                                                      
REMARK 465     LEU A  1056                                                      
REMARK 465     ASP A  1057                                                      
REMARK 465     LYS A  1058                                                      
REMARK 465     ASN A  1059                                                      
REMARK 465     GLY A  1060                                                      
REMARK 465     ASN A  1061                                                      
REMARK 465     GLY A  1062                                                      
REMARK 465     ASP A  1176                                                      
REMARK 465     GLU A  1177                                                      
REMARK 465     ILE A  1178                                                      
REMARK 465     ASP A  1179                                                      
REMARK 465     ASN A  1180                                                      
REMARK 465     ALA A  1181                                                      
REMARK 465     ALA A  1182                                                      
REMARK 465     ASP A  1183                                                      
REMARK 465     THR A  1184                                                      
REMARK 465     PRO A  1185                                                      
REMARK 465     ILE A  1229                                                      
REMARK 465     ASP A  1230                                                      
REMARK 465     SER A  1231                                                      
REMARK 465     PHE A  1232                                                      
REMARK 465     ASN A  1233                                                      
REMARK 465     VAL A  1234                                                      
REMARK 465     VAL A  1235                                                      
REMARK 465     ARG A  1236                                                      
REMARK 465     LEU A  1237                                                      
REMARK 465     SER A  1238                                                      
REMARK 465     GLU A  1239                                                      
REMARK 465     ALA A  1240                                                      
REMARK 465     LEU A  1241                                                      
REMARK 465     GLY A  1242                                                      
REMARK 465     LEU A  1243                                                      
REMARK 465     ASP A  1244                                                      
REMARK 465     SER A  1245                                                      
REMARK 465     LYS A  1246                                                      
REMARK 465     LYS A  1247                                                      
REMARK 465     TYR A  1248                                                      
REMARK 465     PHE A  1249                                                      
REMARK 465     ARG A  1250                                                      
REMARK 465     ARG A  1251                                                      
REMARK 465     GLU A  1252                                                      
REMARK 465     GLY A  1253                                                      
REMARK 465     GLY A  1254                                                      
REMARK 465     ASN A  1255                                                      
REMARK 465     ASN A  1256                                                      
REMARK 465     ASN A  1257                                                      
REMARK 465     GLY A  1258                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    THR A   792     O    HOH A  1444              2.09            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A 433       28.41   -150.38                                   
REMARK 500    PHE A 434     -158.18   -115.73                                   
REMARK 500    SER A 457       53.56     39.92                                   
REMARK 500    ASP A 465       49.13   -102.06                                   
REMARK 500    SER A 468      149.16   -170.47                                   
REMARK 500    ASN A 566       57.47   -145.32                                   
REMARK 500    SER A 591     -157.80   -106.30                                   
REMARK 500    VAL A 643      -69.74   -133.37                                   
REMARK 500    THR A 659       32.99    -99.75                                   
REMARK 500    SER A 692      130.29    -38.30                                   
REMARK 500    ASN A 783     -159.89    -97.07                                   
REMARK 500    LYS A1074       79.45   -111.47                                   
REMARK 500    ASP A1096       35.02    -87.11                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4B08   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE SELENOMETHIONINE PROTEIN.                   
REMARK 900 RELATED ID: 4FXD   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF YEAST DNA POLYMERASE ALPHA BOUND TO DNA/RNA     
REMARK 900 RELATED ID: 4FYD   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF YEAST DNA POLYMERASE ALPHA BOUND TO DNA/RNA     
REMARK 900 AND DGTP                                                             
DBREF  4FVM A  349  1258  UNP    P13382   DPOA_YEAST     349   1258             
SEQRES   1 A  910  THR ASP THR PHE GLN MET PHE TRP LEU ASP TYR CYS GLU          
SEQRES   2 A  910  VAL ASN ASN THR LEU ILE LEU PHE GLY LYS VAL LYS LEU          
SEQRES   3 A  910  LYS ASP ASP ASN CYS VAL SER ALA MET VAL GLN ILE ASN          
SEQRES   4 A  910  GLY LEU CYS ARG GLU LEU PHE PHE LEU PRO ARG GLU GLY          
SEQRES   5 A  910  LYS THR PRO THR ASP ILE HIS GLU GLU ILE ILE PRO LEU          
SEQRES   6 A  910  LEU MET ASP LYS TYR GLY LEU ASP ASN ILE ARG ALA LYS          
SEQRES   7 A  910  PRO GLN LYS MET LYS TYR SER PHE GLU LEU PRO ASP ILE          
SEQRES   8 A  910  PRO SER GLU SER ASP TYR LEU LYS VAL LEU LEU PRO TYR          
SEQRES   9 A  910  GLN THR PRO LYS SER SER ARG ASP THR ILE PRO SER ASP          
SEQRES  10 A  910  LEU SER SER ASP THR PHE TYR HIS VAL PHE GLY GLY ASN          
SEQRES  11 A  910  SER ASN ILE PHE GLU SER PHE VAL ILE GLN ASN ARG ILE          
SEQRES  12 A  910  MET GLY PRO CYS TRP LEU ASP ILE LYS GLY ALA ASP PHE          
SEQRES  13 A  910  ASN SER ILE ARG ASN ALA SER HIS CYS ALA VAL GLU VAL          
SEQRES  14 A  910  SER VAL ASP LYS PRO GLN ASN ILE THR PRO THR THR THR          
SEQRES  15 A  910  LYS THR MET PRO ASN LEU ARG CYS LEU SER LEU SER ILE          
SEQRES  16 A  910  GLN THR LEU MET ASN PRO LYS GLU ASN LYS GLN GLU ILE          
SEQRES  17 A  910  VAL SER ILE THR LEU SER ALA TYR ARG ASN ILE SER LEU          
SEQRES  18 A  910  ASP SER PRO ILE PRO GLU ASN ILE LYS PRO ASP ASP LEU          
SEQRES  19 A  910  CYS THR LEU VAL ARG PRO PRO GLN SER THR SER PHE PRO          
SEQRES  20 A  910  LEU GLY LEU ALA ALA LEU ALA LYS GLN LYS LEU PRO GLY          
SEQRES  21 A  910  ARG VAL ARG LEU PHE ASN ASN GLU LYS ALA MET LEU SER          
SEQRES  22 A  910  CYS PHE CYS ALA MET LEU LYS VAL GLU ASP PRO ASP VAL          
SEQRES  23 A  910  ILE ILE GLY HIS ARG LEU GLN ASN VAL TYR LEU ASP VAL          
SEQRES  24 A  910  LEU ALA HIS ARG MET HIS ASP LEU ASN ILE PRO THR PHE          
SEQRES  25 A  910  SER SER ILE GLY ARG ARG LEU ARG ARG THR TRP PRO GLU          
SEQRES  26 A  910  LYS PHE GLY ARG GLY ASN SER ASN MET ASN HIS PHE PHE          
SEQRES  27 A  910  ILE SER ASP ILE CYS SER GLY ARG LEU ILE CYS ASP ILE          
SEQRES  28 A  910  ALA ASN GLU MET GLY GLN SER LEU THR PRO LYS CYS GLN          
SEQRES  29 A  910  SER TRP ASP LEU SER GLU MET TYR GLN VAL THR CYS GLU          
SEQRES  30 A  910  LYS GLU HIS LYS PRO LEU ASP ILE ASP TYR GLN ASN PRO          
SEQRES  31 A  910  GLN TYR GLN ASN ASP VAL ASN SER MET THR MET ALA LEU          
SEQRES  32 A  910  GLN GLU ASN ILE THR ASN CYS MET ILE SER ALA GLU VAL          
SEQRES  33 A  910  SER TYR ARG ILE GLN LEU LEU THR LEU THR LYS GLN LEU          
SEQRES  34 A  910  THR ASN LEU ALA GLY ASN ALA TRP ALA GLN THR LEU GLY          
SEQRES  35 A  910  GLY THR ARG ALA GLY ARG ASN GLU TYR ILE LEU LEU HIS          
SEQRES  36 A  910  GLU PHE SER ARG ASN GLY PHE ILE VAL PRO ASP LYS GLU          
SEQRES  37 A  910  GLY ASN ARG SER ARG ALA GLN LYS GLN ARG GLN ASN GLU          
SEQRES  38 A  910  GLU ASN ALA ASP ALA PRO VAL ASN SER LYS LYS ALA LYS          
SEQRES  39 A  910  TYR GLN GLY GLY LEU VAL PHE GLU PRO GLU LYS GLY LEU          
SEQRES  40 A  910  HIS LYS ASN TYR VAL LEU VAL MET ASP PHE ASN SER LEU          
SEQRES  41 A  910  TYR PRO SER ILE ILE GLN GLU PHE ASN ILE CYS PHE THR          
SEQRES  42 A  910  THR VAL ASP ARG ASN LYS GLU ASP ILE ASP GLU LEU PRO          
SEQRES  43 A  910  SER VAL PRO PRO SER GLU VAL ASP GLN GLY VAL LEU PRO          
SEQRES  44 A  910  ARG LEU LEU ALA ASN LEU VAL ASP ARG ARG ARG GLU VAL          
SEQRES  45 A  910  LYS LYS VAL MET LYS THR GLU THR ASP PRO HIS LYS ARG          
SEQRES  46 A  910  VAL GLN CYS ASP ILE ARG GLN GLN ALA LEU LYS LEU THR          
SEQRES  47 A  910  ALA ASN SER MET TYR GLY CYS LEU GLY TYR VAL ASN SER          
SEQRES  48 A  910  ARG PHE TYR ALA LYS PRO LEU ALA MET LEU VAL THR ASN          
SEQRES  49 A  910  LYS GLY ARG GLU ILE LEU MET ASN THR ARG GLN LEU ALA          
SEQRES  50 A  910  GLU SER MET ASN LEU LEU VAL VAL TYR GLY ASP THR ASP          
SEQRES  51 A  910  SER VAL MET ILE ASP THR GLY CYS ASP ASN TYR ALA ASP          
SEQRES  52 A  910  ALA ILE LYS ILE GLY LEU GLY PHE LYS ARG LEU VAL ASN          
SEQRES  53 A  910  GLU ARG TYR ARG LEU LEU GLU ILE ASP ILE ASP ASN VAL          
SEQRES  54 A  910  PHE LYS LYS LEU LEU LEU HIS ALA LYS LYS LYS TYR ALA          
SEQRES  55 A  910  ALA LEU THR VAL ASN LEU ASP LYS ASN GLY ASN GLY THR          
SEQRES  56 A  910  THR VAL LEU GLU VAL LYS GLY LEU ASP MET LYS ARG ARG          
SEQRES  57 A  910  GLU PHE CYS PRO LEU SER ARG ASP VAL SER ILE HIS VAL          
SEQRES  58 A  910  LEU ASN THR ILE LEU SER ASP LYS ASP PRO GLU GLU ALA          
SEQRES  59 A  910  LEU GLN GLU VAL TYR ASP TYR LEU GLU ASP ILE ARG ILE          
SEQRES  60 A  910  LYS VAL GLU THR ASN ASN ILE ARG ILE ASP LYS TYR LYS          
SEQRES  61 A  910  ILE ASN MET LYS LEU SER LYS ASP PRO LYS ALA TYR PRO          
SEQRES  62 A  910  GLY GLY LYS ASN MET PRO ALA VAL GLN VAL ALA LEU ARG          
SEQRES  63 A  910  MET ARG LYS ALA GLY ARG VAL VAL LYS ALA GLY SER VAL          
SEQRES  64 A  910  ILE THR PHE VAL ILE THR LYS GLN ASP GLU ILE ASP ASN          
SEQRES  65 A  910  ALA ALA ASP THR PRO ALA LEU SER VAL ALA GLU ARG ALA          
SEQRES  66 A  910  HIS ALA LEU ASN GLU VAL MET ILE LYS SER ASN ASN LEU          
SEQRES  67 A  910  ILE PRO ASP PRO GLN TYR TYR LEU GLU LYS GLN ILE PHE          
SEQRES  68 A  910  ALA PRO VAL GLU ARG LEU LEU GLU ARG ILE ASP SER PHE          
SEQRES  69 A  910  ASN VAL VAL ARG LEU SER GLU ALA LEU GLY LEU ASP SER          
SEQRES  70 A  910  LYS LYS TYR PHE ARG ARG GLU GLY GLY ASN ASN ASN GLY          
FORMUL   2  HOH   *216(H2 O)                                                    
HELIX    1   1 THR A  402  GLY A  419  1                                  18    
HELIX    2   2 ASN A  480  ASN A  489  1                                  10    
HELIX    3   3 LYS A  521  GLN A  523  5                                   3    
HELIX    4   4 GLY A  597  LEU A  606  1                                  10    
HELIX    5   5 ASN A  615  ASP A  631  1                                  17    
HELIX    6   6 VAL A  643  LEU A  655  1                                  13    
HELIX    7   7 THR A  659  GLY A  664  5                                   6    
HELIX    8   8 ASN A  681  SER A  692  1                                  12    
HELIX    9   9 ASN A  701  LEU A  707  1                                   7    
HELIX   10  10 ASP A  715  GLU A  725  1                                  11    
HELIX   11  11 PRO A  738  ASP A  743  1                                   6    
HELIX   12  12 ASP A  743  ILE A  768  1                                  26    
HELIX   13  13 GLN A  769  GLY A  782  1                                  14    
HELIX   14  14 ALA A  784  GLY A  791  1                                   8    
HELIX   15  15 ARG A  793  ASN A  808  1                                  16    
HELIX   16  16 SER A  867  PHE A  876  1                                  10    
HELIX   17  17 GLY A  904  GLU A  927  1                                  24    
HELIX   18  18 ASP A  929  ASN A  948  1                                  20    
HELIX   19  19 MET A  950  TYR A  956  1                                   7    
HELIX   20  20 ALA A  963  MET A  988  1                                  26    
HELIX   21  21 ASN A 1008  TYR A 1027  1                                  20    
HELIX   22  22 CYS A 1079  LEU A 1094  1                                  16    
HELIX   23  23 GLU A 1100  THR A 1119  1                                  20    
HELIX   24  24 ARG A 1123  LYS A 1128  5                                   6    
HELIX   25  25 ASP A 1136  TYR A 1140  5                                   5    
HELIX   26  26 GLY A 1142  ASN A 1145  5                                   4    
HELIX   27  27 MET A 1146  GLY A 1159  1                                  14    
HELIX   28  28 LEU A 1196  ILE A 1201  1                                   6    
HELIX   29  29 LYS A 1202  ASN A 1205  5                                   4    
HELIX   30  30 ASP A 1209  LYS A 1216  1                                   8    
HELIX   31  31 ILE A 1218  LEU A 1226  1                                   9    
SHEET    1   A 6 VAL A 515  VAL A 519  0                                        
SHEET    2   A 6 CYS A 379  ILE A 386  1  N  MET A 383   O  VAL A 515           
SHEET    3   A 6 THR A 365  LYS A 373 -1  N  LEU A 366   O  ILE A 386           
SHEET    4   A 6 PHE A 352  VAL A 362 -1  N  LEU A 357   O  PHE A 369           
SHEET    5   A 6 TRP A 496  ILE A 499 -1  O  ILE A 499   N  PHE A 352           
SHEET    6   A 6 ILE A 525  PRO A 527 -1  O  THR A 526   N  ASP A 498           
SHEET    1   B 4 ALA A 425  LYS A 431  0                                        
SHEET    2   B 4 GLU A 442  PRO A 451 -1  O  TYR A 445   N  GLN A 428           
SHEET    3   B 4 CYS A 390  PRO A 397 -1  N  ARG A 391   O  LEU A 450           
SHEET    4   B 4 PHE A 471  PHE A 475 -1  O  HIS A 473   N  LEU A 396           
SHEET    1   C 6 ARG A 609  LEU A 612  0                                        
SHEET    2   C 6 ASP A 581  VAL A 586  1  N  THR A 584   O  ARG A 611           
SHEET    3   C 6 LYS A 553  ILE A 567 -1  N  ILE A 559   O  LEU A 585           
SHEET    4   C 6 LEU A 536  ASN A 548 -1  N  CYS A 538   O  TYR A 564           
SHEET    5   C 6 VAL A 634  GLY A 637  1  O  ILE A 636   N  LEU A 541           
SHEET    6   C 6 LEU A 695  ASP A 698  1  O  LEU A 695   N  ILE A 635           
SHEET    1   D 5 GLY A 854  HIS A 856  0                                        
SHEET    2   D 5 ASP A1033  ALA A1045 -1  O  LEU A1043   N  GLY A 854           
SHEET    3   D 5 VAL A 860  ASP A 864 -1  N  ASP A 864   O  ASP A1033           
SHEET    4   D 5 SER A 999  ASP A1003 -1  O  VAL A1000   N  MET A 863           
SHEET    5   D 5 LEU A 991  GLY A 995 -1  N  TYR A 994   O  MET A1001           
SHEET    1   E 4 GLY A 854  HIS A 856  0                                        
SHEET    2   E 4 ASP A1033  ALA A1045 -1  O  LEU A1043   N  GLY A 854           
SHEET    3   E 4 LYS A1048  THR A1053 -1  O  ALA A1050   N  LEU A1042           
SHEET    4   E 4 VAL A1065  LYS A1069 -1  O  GLU A1067   N  ALA A1051           
SHEET    1   F 3 ILE A1129  LYS A1132  0                                        
SHEET    2   F 3 VAL A1167  ILE A1172 -1  O  ILE A1168   N  MET A1131           
SHEET    3   F 3 ALA A1193  ALA A1195 -1  O  HIS A1194   N  VAL A1171           
CRYST1   74.380  127.140   74.570  90.00 104.78  90.00 P 1 21 1      2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.013444  0.000000  0.003547        0.00000                         
SCALE2      0.000000  0.007865  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013869        0.00000