data_4FVT # _entry.id 4FVT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4FVT RCSB RCSB073418 WWPDB D_1000073418 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4G1C _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4FVT _pdbx_database_status.recvd_initial_deposition_date 2012-06-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Dai, H.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Synthesis of Carba-NAD and the Structures of Its Ternary Complexes with SIRT3 and SIRT5.' _citation.journal_abbrev J.Org.Chem. _citation.journal_volume 77 _citation.page_first 7319 _citation.page_last 7329 _citation.year 2012 _citation.journal_id_ASTM JOCEAH _citation.country US _citation.journal_id_ISSN 0022-3263 _citation.journal_id_CSD 0035 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22849721 _citation.pdbx_database_id_DOI 10.1021/jo301067e # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Szczepankiewicz, B.G.' 1 primary 'Dai, H.' 2 primary 'Koppetsch, K.J.' 3 primary 'Qian, D.' 4 primary 'Jiang, F.' 5 primary 'Mao, C.' 6 primary 'Perni, R.B.' 7 # _cell.entry_id 4FVT _cell.length_a 77.430 _cell.length_b 131.050 _cell.length_c 77.320 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4FVT _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NAD-dependent protein deacetylase sirtuin-3, mitochondrial' 30553.260 1 3.5.1.- ? 'UNP residues 122-395' ? 2 polymer syn 'Acetylated ACS2 peptide' 544.642 1 ? ? ? ? 3 non-polymer syn CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE 662.460 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 5 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 7 water nat water 18.015 55 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'hSIRT3, Regulatory protein SIR2 homolog 3, SIR2-like protein 3' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;KLSLQDVAELIRARACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYP GNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCP VCTGVVKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVA QLGDVVHGVESLVELLGWTEEMRDLVQRETGKLD ; ;KLSLQDVAELIRARACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYP GNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCP VCTGVVKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVA QLGDVVHGVESLVELLGWTEEMRDLVQRETGKLD ; A ? 2 'polypeptide(L)' no yes 'SG(ALY)V(NLE)' SGKVL B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 LEU n 1 3 SER n 1 4 LEU n 1 5 GLN n 1 6 ASP n 1 7 VAL n 1 8 ALA n 1 9 GLU n 1 10 LEU n 1 11 ILE n 1 12 ARG n 1 13 ALA n 1 14 ARG n 1 15 ALA n 1 16 CYS n 1 17 GLN n 1 18 ARG n 1 19 VAL n 1 20 VAL n 1 21 VAL n 1 22 MET n 1 23 VAL n 1 24 GLY n 1 25 ALA n 1 26 GLY n 1 27 ILE n 1 28 SER n 1 29 THR n 1 30 PRO n 1 31 SER n 1 32 GLY n 1 33 ILE n 1 34 PRO n 1 35 ASP n 1 36 PHE n 1 37 ARG n 1 38 SER n 1 39 PRO n 1 40 GLY n 1 41 SER n 1 42 GLY n 1 43 LEU n 1 44 TYR n 1 45 SER n 1 46 ASN n 1 47 LEU n 1 48 GLN n 1 49 GLN n 1 50 TYR n 1 51 ASP n 1 52 LEU n 1 53 PRO n 1 54 TYR n 1 55 PRO n 1 56 GLU n 1 57 ALA n 1 58 ILE n 1 59 PHE n 1 60 GLU n 1 61 LEU n 1 62 PRO n 1 63 PHE n 1 64 PHE n 1 65 PHE n 1 66 HIS n 1 67 ASN n 1 68 PRO n 1 69 LYS n 1 70 PRO n 1 71 PHE n 1 72 PHE n 1 73 THR n 1 74 LEU n 1 75 ALA n 1 76 LYS n 1 77 GLU n 1 78 LEU n 1 79 TYR n 1 80 PRO n 1 81 GLY n 1 82 ASN n 1 83 TYR n 1 84 LYS n 1 85 PRO n 1 86 ASN n 1 87 VAL n 1 88 THR n 1 89 HIS n 1 90 TYR n 1 91 PHE n 1 92 LEU n 1 93 ARG n 1 94 LEU n 1 95 LEU n 1 96 HIS n 1 97 ASP n 1 98 LYS n 1 99 GLY n 1 100 LEU n 1 101 LEU n 1 102 LEU n 1 103 ARG n 1 104 LEU n 1 105 TYR n 1 106 THR n 1 107 GLN n 1 108 ASN n 1 109 ILE n 1 110 ASP n 1 111 GLY n 1 112 LEU n 1 113 GLU n 1 114 ARG n 1 115 VAL n 1 116 SER n 1 117 GLY n 1 118 ILE n 1 119 PRO n 1 120 ALA n 1 121 SER n 1 122 LYS n 1 123 LEU n 1 124 VAL n 1 125 GLU n 1 126 ALA n 1 127 HIS n 1 128 GLY n 1 129 THR n 1 130 PHE n 1 131 ALA n 1 132 SER n 1 133 ALA n 1 134 THR n 1 135 CYS n 1 136 THR n 1 137 VAL n 1 138 CYS n 1 139 GLN n 1 140 ARG n 1 141 PRO n 1 142 PHE n 1 143 PRO n 1 144 GLY n 1 145 GLU n 1 146 ASP n 1 147 ILE n 1 148 ARG n 1 149 ALA n 1 150 ASP n 1 151 VAL n 1 152 MET n 1 153 ALA n 1 154 ASP n 1 155 ARG n 1 156 VAL n 1 157 PRO n 1 158 ARG n 1 159 CYS n 1 160 PRO n 1 161 VAL n 1 162 CYS n 1 163 THR n 1 164 GLY n 1 165 VAL n 1 166 VAL n 1 167 LYS n 1 168 PRO n 1 169 ASP n 1 170 ILE n 1 171 VAL n 1 172 PHE n 1 173 PHE n 1 174 GLY n 1 175 GLU n 1 176 PRO n 1 177 LEU n 1 178 PRO n 1 179 GLN n 1 180 ARG n 1 181 PHE n 1 182 LEU n 1 183 LEU n 1 184 HIS n 1 185 VAL n 1 186 VAL n 1 187 ASP n 1 188 PHE n 1 189 PRO n 1 190 MET n 1 191 ALA n 1 192 ASP n 1 193 LEU n 1 194 LEU n 1 195 LEU n 1 196 ILE n 1 197 LEU n 1 198 GLY n 1 199 THR n 1 200 SER n 1 201 LEU n 1 202 GLU n 1 203 VAL n 1 204 GLU n 1 205 PRO n 1 206 PHE n 1 207 ALA n 1 208 SER n 1 209 LEU n 1 210 THR n 1 211 GLU n 1 212 ALA n 1 213 VAL n 1 214 ARG n 1 215 SER n 1 216 SER n 1 217 VAL n 1 218 PRO n 1 219 ARG n 1 220 LEU n 1 221 LEU n 1 222 ILE n 1 223 ASN n 1 224 ARG n 1 225 ASP n 1 226 LEU n 1 227 VAL n 1 228 GLY n 1 229 PRO n 1 230 LEU n 1 231 ALA n 1 232 TRP n 1 233 HIS n 1 234 PRO n 1 235 ARG n 1 236 SER n 1 237 ARG n 1 238 ASP n 1 239 VAL n 1 240 ALA n 1 241 GLN n 1 242 LEU n 1 243 GLY n 1 244 ASP n 1 245 VAL n 1 246 VAL n 1 247 HIS n 1 248 GLY n 1 249 VAL n 1 250 GLU n 1 251 SER n 1 252 LEU n 1 253 VAL n 1 254 GLU n 1 255 LEU n 1 256 LEU n 1 257 GLY n 1 258 TRP n 1 259 THR n 1 260 GLU n 1 261 GLU n 1 262 MET n 1 263 ARG n 1 264 ASP n 1 265 LEU n 1 266 VAL n 1 267 GLN n 1 268 ARG n 1 269 GLU n 1 270 THR n 1 271 GLY n 1 272 LYS n 1 273 LEU n 1 274 ASP n 2 1 SER n 2 2 GLY n 2 3 ALY n 2 4 VAL n 2 5 NLE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthetic Ac-ACS2 peptide' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP SIR3_HUMAN 1 ;KLSLQDVAELIRARACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYP GNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCP VCTGVVKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVA QLGDVVHGVESLVELLGWTEEMRDLVQRETGKLD ; 122 Q9NTG7 ? 2 PDB 4FVT 2 SGKVL ? 4FVT ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4FVT A 1 ? 274 ? Q9NTG7 122 ? 395 ? 122 395 2 2 4FVT B 1 ? 5 ? 4FVT 3 ? 7 ? 3 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ALY 'L-peptide linking' n 'N(6)-ACETYLLYSINE' ? 'C8 H16 N2 O3' 188.224 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CNA non-polymer . CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C22 H30 N7 O13 P2 1' 662.460 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NLE 'L-peptide linking' n NORLEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4FVT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.15 _exptl_crystal.density_percent_sol 60.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.3 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.2M lithium sulfate monohydrate, 15% (w/v) poly-ethylene glycol (PEG) 12000, and 0.1 M Bis-Tris, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 291K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2011-06-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978490 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.978490 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4FVT _reflns.observed_criterion_sigma_I 3.6 _reflns.observed_criterion_sigma_F 1.9 _reflns.d_resolution_low 38.72 _reflns.d_resolution_high 2.47 _reflns.number_obs 13699 _reflns.number_all 13699 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.47 _reflns_shell.d_res_low 2.53 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4FVT _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13699 _refine.ls_number_reflns_all 13699 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.72 _refine.ls_d_res_high 2.47 _refine.ls_percent_reflns_obs 99.79 _refine.ls_R_factor_obs 0.20440 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20207 _refine.ls_R_factor_R_free 0.24889 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 727 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.B_iso_mean 67.762 _refine.aniso_B[1][1] -0.15 _refine.aniso_B[2][2] 0.28 _refine.aniso_B[3][3] -0.13 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.366 _refine.pdbx_overall_ESU_R_Free 0.257 _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2189 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 66 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 2310 _refine_hist.d_res_high 2.47 _refine_hist.d_res_low 38.72 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 2309 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.316 2.022 ? 3148 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.121 5.000 ? 277 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.880 23.021 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.590 15.000 ? 362 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.969 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.092 0.200 ? 356 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.022 ? 1733 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3.354 1.500 ? 1396 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 4.785 2.000 ? 2268 'X-RAY DIFFRACTION' ? r_scbond_it 5.411 3.000 ? 913 'X-RAY DIFFRACTION' ? r_scangle_it 7.027 4.500 ? 880 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.470 _refine_ls_shell.d_res_low 2.534 _refine_ls_shell.number_reflns_R_work 976 _refine_ls_shell.R_factor_R_work 0.286 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.340 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 63 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 4FVT _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _struct.entry_id 4FVT _struct.title 'Human SIRT3 bound to Ac-ACS peptide and Carba-NAD' _struct.pdbx_descriptor 'NAD-dependent protein deacetylase sirtuin-3, mitochondrial (E.C.3.5.1.-), Acetylated ACS2 peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4FVT _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Sirtuin, Carba-NAD, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? ALA A 13 ? SER A 124 ALA A 134 1 ? 11 HELX_P HELX_P2 2 ALA A 25 ? GLY A 32 ? ALA A 146 GLY A 153 5 ? 8 HELX_P HELX_P3 3 SER A 41 ? ASP A 51 ? SER A 162 ASP A 172 1 ? 11 HELX_P HELX_P4 4 TYR A 54 ? PHE A 59 ? TYR A 175 PHE A 180 5 ? 6 HELX_P HELX_P5 5 GLU A 60 ? ASN A 67 ? GLU A 181 ASN A 188 1 ? 8 HELX_P HELX_P6 6 PRO A 68 ? TYR A 79 ? PRO A 189 TYR A 200 1 ? 12 HELX_P HELX_P7 7 ASN A 86 ? LYS A 98 ? ASN A 207 LYS A 219 1 ? 13 HELX_P HELX_P8 8 GLY A 111 ? SER A 116 ? GLY A 232 SER A 237 1 ? 6 HELX_P HELX_P9 9 PRO A 119 ? SER A 121 ? PRO A 240 SER A 242 5 ? 3 HELX_P HELX_P10 10 ILE A 147 ? ALA A 153 ? ILE A 268 ALA A 274 1 ? 7 HELX_P HELX_P11 11 PRO A 178 ? LEU A 182 ? PRO A 299 LEU A 303 5 ? 5 HELX_P HELX_P12 12 LEU A 183 ? PHE A 188 ? LEU A 304 PHE A 309 1 ? 6 HELX_P HELX_P13 13 PRO A 205 ? VAL A 213 ? PRO A 326 VAL A 334 5 ? 9 HELX_P HELX_P14 14 GLY A 228 ? HIS A 233 ? GLY A 349 HIS A 354 1 ? 6 HELX_P HELX_P15 15 ASP A 244 ? GLY A 257 ? ASP A 365 GLY A 378 1 ? 14 HELX_P HELX_P16 16 TRP A 258 ? ASP A 274 ? TRP A 379 ASP A 395 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B GLY 2 C ? ? ? 1_555 B ALY 3 N ? ? B GLY 4 B ALY 5 1_555 ? ? ? ? ? ? ? 1.336 ? covale2 covale ? ? B ALY 3 C ? ? ? 1_555 B VAL 4 N ? ? B ALY 5 B VAL 6 1_555 ? ? ? ? ? ? ? 1.334 ? covale3 covale ? ? B VAL 4 C ? ? ? 1_555 B NLE 5 N ? ? B VAL 6 B NLE 7 1_555 ? ? ? ? ? ? ? 1.332 ? metalc1 metalc ? ? A CYS 138 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 259 A ZN 405 1_555 ? ? ? ? ? ? ? 2.209 ? metalc2 metalc ? ? A CYS 159 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 280 A ZN 405 1_555 ? ? ? ? ? ? ? 2.302 ? metalc3 metalc ? ? A CYS 162 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 283 A ZN 405 1_555 ? ? ? ? ? ? ? 2.311 ? metalc4 metalc ? ? A CYS 135 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 256 A ZN 405 1_555 ? ? ? ? ? ? ? 2.371 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 204 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 325 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 205 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 326 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 123 ? GLU A 125 ? LEU A 244 GLU A 246 A 2 LEU A 101 ? THR A 106 ? LEU A 222 THR A 227 A 3 VAL A 19 ? VAL A 23 ? VAL A 140 VAL A 144 A 4 LEU A 193 ? LEU A 197 ? LEU A 314 LEU A 318 A 5 ARG A 219 ? ASN A 223 ? ARG A 340 ASN A 344 A 6 ASP A 238 ? LEU A 242 ? ASP A 359 LEU A 363 B 1 PRO A 141 ? PRO A 143 ? PRO A 262 PRO A 264 B 2 GLY A 128 ? CYS A 135 ? GLY A 249 CYS A 256 B 3 VAL A 166 ? ILE A 170 ? VAL A 287 ILE A 291 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 124 ? O VAL A 245 N LEU A 104 ? N LEU A 225 A 2 3 O TYR A 105 ? O TYR A 226 N VAL A 21 ? N VAL A 142 A 3 4 N MET A 22 ? N MET A 143 O LEU A 195 ? O LEU A 316 A 4 5 N ILE A 196 ? N ILE A 317 O ILE A 222 ? O ILE A 343 A 5 6 N LEU A 221 ? N LEU A 342 O GLN A 241 ? O GLN A 362 B 1 2 O PHE A 142 ? O PHE A 263 N ALA A 133 ? N ALA A 254 B 2 3 N THR A 134 ? N THR A 255 O LYS A 167 ? O LYS A 288 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 23 'BINDING SITE FOR RESIDUE CNA A 401' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 402' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A 403' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A 404' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 405' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A 406' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 GLY A 24 ? GLY A 145 . ? 1_555 ? 2 AC1 23 ALA A 25 ? ALA A 146 . ? 1_555 ? 3 AC1 23 GLY A 26 ? GLY A 147 . ? 1_555 ? 4 AC1 23 THR A 29 ? THR A 150 . ? 1_555 ? 5 AC1 23 PRO A 34 ? PRO A 155 . ? 1_555 ? 6 AC1 23 ASP A 35 ? ASP A 156 . ? 1_555 ? 7 AC1 23 PHE A 36 ? PHE A 157 . ? 1_555 ? 8 AC1 23 GLN A 107 ? GLN A 228 . ? 1_555 ? 9 AC1 23 ASN A 108 ? ASN A 229 . ? 1_555 ? 10 AC1 23 ILE A 109 ? ILE A 230 . ? 1_555 ? 11 AC1 23 ASP A 110 ? ASP A 231 . ? 1_555 ? 12 AC1 23 HIS A 127 ? HIS A 248 . ? 1_555 ? 13 AC1 23 GLY A 198 ? GLY A 319 . ? 1_555 ? 14 AC1 23 THR A 199 ? THR A 320 . ? 1_555 ? 15 AC1 23 SER A 200 ? SER A 321 . ? 1_555 ? 16 AC1 23 VAL A 203 ? VAL A 324 . ? 1_555 ? 17 AC1 23 ASN A 223 ? ASN A 344 . ? 1_555 ? 18 AC1 23 ARG A 224 ? ARG A 345 . ? 1_555 ? 19 AC1 23 GLY A 243 ? GLY A 364 . ? 1_555 ? 20 AC1 23 VAL A 245 ? VAL A 366 . ? 1_555 ? 21 AC1 23 HOH I . ? HOH A 522 . ? 1_555 ? 22 AC1 23 HOH I . ? HOH A 523 . ? 1_555 ? 23 AC1 23 ALY B 3 ? ALY B 5 . ? 1_555 ? 24 AC2 4 ARG A 158 ? ARG A 279 . ? 1_555 ? 25 AC2 4 ARG A 263 ? ARG A 384 . ? 8_555 ? 26 AC2 4 HOH I . ? HOH A 530 . ? 1_555 ? 27 AC2 4 HOH I . ? HOH A 542 . ? 1_555 ? 28 AC3 3 PRO A 178 ? PRO A 299 . ? 1_555 ? 29 AC3 3 GLN A 179 ? GLN A 300 . ? 1_555 ? 30 AC3 3 SER B 1 ? SER B 3 . ? 3_654 ? 31 AC4 3 ARG A 93 ? ARG A 214 . ? 1_555 ? 32 AC4 3 GLU A 269 ? GLU A 390 . ? 1_555 ? 33 AC4 3 LYS A 272 ? LYS A 393 . ? 1_555 ? 34 AC5 4 CYS A 135 ? CYS A 256 . ? 1_555 ? 35 AC5 4 CYS A 138 ? CYS A 259 . ? 1_555 ? 36 AC5 4 CYS A 159 ? CYS A 280 . ? 1_555 ? 37 AC5 4 CYS A 162 ? CYS A 283 . ? 1_555 ? 38 AC6 4 GLY A 99 ? GLY A 220 . ? 1_555 ? 39 AC6 4 LEU A 101 ? LEU A 222 . ? 1_555 ? 40 AC6 4 LYS A 122 ? LYS A 243 . ? 1_555 ? 41 AC6 4 HOH I . ? HOH A 528 . ? 1_555 ? # _database_PDB_matrix.entry_id 4FVT _database_PDB_matrix.origx[1][1] 0.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 0.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 0.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4FVT _atom_sites.fract_transf_matrix[1][1] 0.012915 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007631 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012933 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 122 122 LYS LYS A . n A 1 2 LEU 2 123 123 LEU LEU A . n A 1 3 SER 3 124 124 SER SER A . n A 1 4 LEU 4 125 125 LEU LEU A . n A 1 5 GLN 5 126 126 GLN GLN A . n A 1 6 ASP 6 127 127 ASP ASP A . n A 1 7 VAL 7 128 128 VAL VAL A . n A 1 8 ALA 8 129 129 ALA ALA A . n A 1 9 GLU 9 130 130 GLU GLU A . n A 1 10 LEU 10 131 131 LEU LEU A . n A 1 11 ILE 11 132 132 ILE ILE A . n A 1 12 ARG 12 133 133 ARG ARG A . n A 1 13 ALA 13 134 134 ALA ALA A . n A 1 14 ARG 14 135 135 ARG ARG A . n A 1 15 ALA 15 136 136 ALA ALA A . n A 1 16 CYS 16 137 137 CYS CYS A . n A 1 17 GLN 17 138 138 GLN GLN A . n A 1 18 ARG 18 139 139 ARG ARG A . n A 1 19 VAL 19 140 140 VAL VAL A . n A 1 20 VAL 20 141 141 VAL VAL A . n A 1 21 VAL 21 142 142 VAL VAL A . n A 1 22 MET 22 143 143 MET MET A . n A 1 23 VAL 23 144 144 VAL VAL A . n A 1 24 GLY 24 145 145 GLY GLY A . n A 1 25 ALA 25 146 146 ALA ALA A . n A 1 26 GLY 26 147 147 GLY GLY A . n A 1 27 ILE 27 148 148 ILE ILE A . n A 1 28 SER 28 149 149 SER SER A . n A 1 29 THR 29 150 150 THR THR A . n A 1 30 PRO 30 151 151 PRO PRO A . n A 1 31 SER 31 152 152 SER SER A . n A 1 32 GLY 32 153 153 GLY GLY A . n A 1 33 ILE 33 154 154 ILE ILE A . n A 1 34 PRO 34 155 155 PRO PRO A . n A 1 35 ASP 35 156 156 ASP ASP A . n A 1 36 PHE 36 157 157 PHE PHE A . n A 1 37 ARG 37 158 158 ARG ARG A . n A 1 38 SER 38 159 159 SER SER A . n A 1 39 PRO 39 160 160 PRO PRO A . n A 1 40 GLY 40 161 161 GLY GLY A . n A 1 41 SER 41 162 162 SER SER A . n A 1 42 GLY 42 163 163 GLY GLY A . n A 1 43 LEU 43 164 164 LEU LEU A . n A 1 44 TYR 44 165 165 TYR TYR A . n A 1 45 SER 45 166 166 SER SER A . n A 1 46 ASN 46 167 167 ASN ASN A . n A 1 47 LEU 47 168 168 LEU LEU A . n A 1 48 GLN 48 169 169 GLN GLN A . n A 1 49 GLN 49 170 170 GLN GLN A . n A 1 50 TYR 50 171 171 TYR TYR A . n A 1 51 ASP 51 172 172 ASP ASP A . n A 1 52 LEU 52 173 173 LEU LEU A . n A 1 53 PRO 53 174 174 PRO PRO A . n A 1 54 TYR 54 175 175 TYR TYR A . n A 1 55 PRO 55 176 176 PRO PRO A . n A 1 56 GLU 56 177 177 GLU GLU A . n A 1 57 ALA 57 178 178 ALA ALA A . n A 1 58 ILE 58 179 179 ILE ILE A . n A 1 59 PHE 59 180 180 PHE PHE A . n A 1 60 GLU 60 181 181 GLU GLU A . n A 1 61 LEU 61 182 182 LEU LEU A . n A 1 62 PRO 62 183 183 PRO PRO A . n A 1 63 PHE 63 184 184 PHE PHE A . n A 1 64 PHE 64 185 185 PHE PHE A . n A 1 65 PHE 65 186 186 PHE PHE A . n A 1 66 HIS 66 187 187 HIS HIS A . n A 1 67 ASN 67 188 188 ASN ASN A . n A 1 68 PRO 68 189 189 PRO PRO A . n A 1 69 LYS 69 190 190 LYS LYS A . n A 1 70 PRO 70 191 191 PRO PRO A . n A 1 71 PHE 71 192 192 PHE PHE A . n A 1 72 PHE 72 193 193 PHE PHE A . n A 1 73 THR 73 194 194 THR THR A . n A 1 74 LEU 74 195 195 LEU LEU A . n A 1 75 ALA 75 196 196 ALA ALA A . n A 1 76 LYS 76 197 197 LYS LYS A . n A 1 77 GLU 77 198 198 GLU GLU A . n A 1 78 LEU 78 199 199 LEU LEU A . n A 1 79 TYR 79 200 200 TYR TYR A . n A 1 80 PRO 80 201 201 PRO PRO A . n A 1 81 GLY 81 202 202 GLY GLY A . n A 1 82 ASN 82 203 203 ASN ASN A . n A 1 83 TYR 83 204 204 TYR TYR A . n A 1 84 LYS 84 205 205 LYS LYS A . n A 1 85 PRO 85 206 206 PRO PRO A . n A 1 86 ASN 86 207 207 ASN ASN A . n A 1 87 VAL 87 208 208 VAL VAL A . n A 1 88 THR 88 209 209 THR THR A . n A 1 89 HIS 89 210 210 HIS HIS A . n A 1 90 TYR 90 211 211 TYR TYR A . n A 1 91 PHE 91 212 212 PHE PHE A . n A 1 92 LEU 92 213 213 LEU LEU A . n A 1 93 ARG 93 214 214 ARG ARG A . n A 1 94 LEU 94 215 215 LEU LEU A . n A 1 95 LEU 95 216 216 LEU LEU A . n A 1 96 HIS 96 217 217 HIS HIS A . n A 1 97 ASP 97 218 218 ASP ASP A . n A 1 98 LYS 98 219 219 LYS LYS A . n A 1 99 GLY 99 220 220 GLY GLY A . n A 1 100 LEU 100 221 221 LEU LEU A . n A 1 101 LEU 101 222 222 LEU LEU A . n A 1 102 LEU 102 223 223 LEU LEU A . n A 1 103 ARG 103 224 224 ARG ARG A . n A 1 104 LEU 104 225 225 LEU LEU A . n A 1 105 TYR 105 226 226 TYR TYR A . n A 1 106 THR 106 227 227 THR THR A . n A 1 107 GLN 107 228 228 GLN GLN A . n A 1 108 ASN 108 229 229 ASN ASN A . n A 1 109 ILE 109 230 230 ILE ILE A . n A 1 110 ASP 110 231 231 ASP ASP A . n A 1 111 GLY 111 232 232 GLY GLY A . n A 1 112 LEU 112 233 233 LEU LEU A . n A 1 113 GLU 113 234 234 GLU GLU A . n A 1 114 ARG 114 235 235 ARG ARG A . n A 1 115 VAL 115 236 236 VAL VAL A . n A 1 116 SER 116 237 237 SER SER A . n A 1 117 GLY 117 238 238 GLY GLY A . n A 1 118 ILE 118 239 239 ILE ILE A . n A 1 119 PRO 119 240 240 PRO PRO A . n A 1 120 ALA 120 241 241 ALA ALA A . n A 1 121 SER 121 242 242 SER SER A . n A 1 122 LYS 122 243 243 LYS LYS A . n A 1 123 LEU 123 244 244 LEU LEU A . n A 1 124 VAL 124 245 245 VAL VAL A . n A 1 125 GLU 125 246 246 GLU GLU A . n A 1 126 ALA 126 247 247 ALA ALA A . n A 1 127 HIS 127 248 248 HIS HIS A . n A 1 128 GLY 128 249 249 GLY GLY A . n A 1 129 THR 129 250 250 THR THR A . n A 1 130 PHE 130 251 251 PHE PHE A . n A 1 131 ALA 131 252 252 ALA ALA A . n A 1 132 SER 132 253 253 SER SER A . n A 1 133 ALA 133 254 254 ALA ALA A . n A 1 134 THR 134 255 255 THR THR A . n A 1 135 CYS 135 256 256 CYS CYS A . n A 1 136 THR 136 257 257 THR THR A . n A 1 137 VAL 137 258 258 VAL VAL A . n A 1 138 CYS 138 259 259 CYS CYS A . n A 1 139 GLN 139 260 260 GLN GLN A . n A 1 140 ARG 140 261 261 ARG ARG A . n A 1 141 PRO 141 262 262 PRO PRO A . n A 1 142 PHE 142 263 263 PHE PHE A . n A 1 143 PRO 143 264 264 PRO PRO A . n A 1 144 GLY 144 265 265 GLY GLY A . n A 1 145 GLU 145 266 266 GLU GLU A . n A 1 146 ASP 146 267 267 ASP ASP A . n A 1 147 ILE 147 268 268 ILE ILE A . n A 1 148 ARG 148 269 269 ARG ARG A . n A 1 149 ALA 149 270 270 ALA ALA A . n A 1 150 ASP 150 271 271 ASP ASP A . n A 1 151 VAL 151 272 272 VAL VAL A . n A 1 152 MET 152 273 273 MET MET A . n A 1 153 ALA 153 274 274 ALA ALA A . n A 1 154 ASP 154 275 275 ASP ASP A . n A 1 155 ARG 155 276 276 ARG ARG A . n A 1 156 VAL 156 277 277 VAL VAL A . n A 1 157 PRO 157 278 278 PRO PRO A . n A 1 158 ARG 158 279 279 ARG ARG A . n A 1 159 CYS 159 280 280 CYS CYS A . n A 1 160 PRO 160 281 281 PRO PRO A . n A 1 161 VAL 161 282 282 VAL VAL A . n A 1 162 CYS 162 283 283 CYS CYS A . n A 1 163 THR 163 284 284 THR THR A . n A 1 164 GLY 164 285 285 GLY GLY A . n A 1 165 VAL 165 286 286 VAL VAL A . n A 1 166 VAL 166 287 287 VAL VAL A . n A 1 167 LYS 167 288 288 LYS LYS A . n A 1 168 PRO 168 289 289 PRO PRO A . n A 1 169 ASP 169 290 290 ASP ASP A . n A 1 170 ILE 170 291 291 ILE ILE A . n A 1 171 VAL 171 292 292 VAL VAL A . n A 1 172 PHE 172 293 293 PHE PHE A . n A 1 173 PHE 173 294 294 PHE PHE A . n A 1 174 GLY 174 295 295 GLY GLY A . n A 1 175 GLU 175 296 296 GLU GLU A . n A 1 176 PRO 176 297 297 PRO PRO A . n A 1 177 LEU 177 298 298 LEU LEU A . n A 1 178 PRO 178 299 299 PRO PRO A . n A 1 179 GLN 179 300 300 GLN GLN A . n A 1 180 ARG 180 301 301 ARG ARG A . n A 1 181 PHE 181 302 302 PHE PHE A . n A 1 182 LEU 182 303 303 LEU LEU A . n A 1 183 LEU 183 304 304 LEU LEU A . n A 1 184 HIS 184 305 305 HIS HIS A . n A 1 185 VAL 185 306 306 VAL VAL A . n A 1 186 VAL 186 307 307 VAL VAL A . n A 1 187 ASP 187 308 308 ASP ASP A . n A 1 188 PHE 188 309 309 PHE PHE A . n A 1 189 PRO 189 310 310 PRO PRO A . n A 1 190 MET 190 311 311 MET MET A . n A 1 191 ALA 191 312 312 ALA ALA A . n A 1 192 ASP 192 313 313 ASP ASP A . n A 1 193 LEU 193 314 314 LEU LEU A . n A 1 194 LEU 194 315 315 LEU LEU A . n A 1 195 LEU 195 316 316 LEU LEU A . n A 1 196 ILE 196 317 317 ILE ILE A . n A 1 197 LEU 197 318 318 LEU LEU A . n A 1 198 GLY 198 319 319 GLY GLY A . n A 1 199 THR 199 320 320 THR THR A . n A 1 200 SER 200 321 321 SER SER A . n A 1 201 LEU 201 322 322 LEU LEU A . n A 1 202 GLU 202 323 323 GLU GLU A . n A 1 203 VAL 203 324 324 VAL VAL A . n A 1 204 GLU 204 325 325 GLU GLU A . n A 1 205 PRO 205 326 326 PRO PRO A . n A 1 206 PHE 206 327 327 PHE PHE A . n A 1 207 ALA 207 328 328 ALA ALA A . n A 1 208 SER 208 329 329 SER SER A . n A 1 209 LEU 209 330 330 LEU LEU A . n A 1 210 THR 210 331 331 THR THR A . n A 1 211 GLU 211 332 332 GLU GLU A . n A 1 212 ALA 212 333 333 ALA ALA A . n A 1 213 VAL 213 334 334 VAL VAL A . n A 1 214 ARG 214 335 335 ARG ARG A . n A 1 215 SER 215 336 336 SER SER A . n A 1 216 SER 216 337 337 SER SER A . n A 1 217 VAL 217 338 338 VAL VAL A . n A 1 218 PRO 218 339 339 PRO PRO A . n A 1 219 ARG 219 340 340 ARG ARG A . n A 1 220 LEU 220 341 341 LEU LEU A . n A 1 221 LEU 221 342 342 LEU LEU A . n A 1 222 ILE 222 343 343 ILE ILE A . n A 1 223 ASN 223 344 344 ASN ASN A . n A 1 224 ARG 224 345 345 ARG ARG A . n A 1 225 ASP 225 346 346 ASP ASP A . n A 1 226 LEU 226 347 347 LEU LEU A . n A 1 227 VAL 227 348 348 VAL VAL A . n A 1 228 GLY 228 349 349 GLY GLY A . n A 1 229 PRO 229 350 350 PRO PRO A . n A 1 230 LEU 230 351 351 LEU LEU A . n A 1 231 ALA 231 352 352 ALA ALA A . n A 1 232 TRP 232 353 353 TRP TRP A . n A 1 233 HIS 233 354 354 HIS HIS A . n A 1 234 PRO 234 355 355 PRO PRO A . n A 1 235 ARG 235 356 356 ARG ARG A . n A 1 236 SER 236 357 357 SER SER A . n A 1 237 ARG 237 358 358 ARG ARG A . n A 1 238 ASP 238 359 359 ASP ASP A . n A 1 239 VAL 239 360 360 VAL VAL A . n A 1 240 ALA 240 361 361 ALA ALA A . n A 1 241 GLN 241 362 362 GLN GLN A . n A 1 242 LEU 242 363 363 LEU LEU A . n A 1 243 GLY 243 364 364 GLY GLY A . n A 1 244 ASP 244 365 365 ASP ASP A . n A 1 245 VAL 245 366 366 VAL VAL A . n A 1 246 VAL 246 367 367 VAL VAL A . n A 1 247 HIS 247 368 368 HIS HIS A . n A 1 248 GLY 248 369 369 GLY GLY A . n A 1 249 VAL 249 370 370 VAL VAL A . n A 1 250 GLU 250 371 371 GLU GLU A . n A 1 251 SER 251 372 372 SER SER A . n A 1 252 LEU 252 373 373 LEU LEU A . n A 1 253 VAL 253 374 374 VAL VAL A . n A 1 254 GLU 254 375 375 GLU GLU A . n A 1 255 LEU 255 376 376 LEU LEU A . n A 1 256 LEU 256 377 377 LEU LEU A . n A 1 257 GLY 257 378 378 GLY GLY A . n A 1 258 TRP 258 379 379 TRP TRP A . n A 1 259 THR 259 380 380 THR THR A . n A 1 260 GLU 260 381 381 GLU GLU A . n A 1 261 GLU 261 382 382 GLU GLU A . n A 1 262 MET 262 383 383 MET MET A . n A 1 263 ARG 263 384 384 ARG ARG A . n A 1 264 ASP 264 385 385 ASP ASP A . n A 1 265 LEU 265 386 386 LEU LEU A . n A 1 266 VAL 266 387 387 VAL VAL A . n A 1 267 GLN 267 388 388 GLN GLN A . n A 1 268 ARG 268 389 389 ARG ARG A . n A 1 269 GLU 269 390 390 GLU GLU A . n A 1 270 THR 270 391 391 THR THR A . n A 1 271 GLY 271 392 392 GLY GLY A . n A 1 272 LYS 272 393 393 LYS LYS A . n A 1 273 LEU 273 394 394 LEU LEU A . n A 1 274 ASP 274 395 395 ASP ASP A . n B 2 1 SER 1 3 3 SER SER B . n B 2 2 GLY 2 4 4 GLY GLY B . n B 2 3 ALY 3 5 5 ALY ALY B . n B 2 4 VAL 4 6 6 VAL VAL B . n B 2 5 NLE 5 7 7 NLE NLE B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ALY 3 B ALY 5 ? LYS 'N(6)-ACETYLLYSINE' 2 B NLE 5 B NLE 7 ? LEU NORLEUCINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 860 ? 1 MORE -6 ? 1 'SSA (A^2)' 12850 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 138 ? A CYS 259 ? 1_555 ZN ? G ZN . ? A ZN 405 ? 1_555 SG ? A CYS 159 ? A CYS 280 ? 1_555 109.8 ? 2 SG ? A CYS 138 ? A CYS 259 ? 1_555 ZN ? G ZN . ? A ZN 405 ? 1_555 SG ? A CYS 162 ? A CYS 283 ? 1_555 122.3 ? 3 SG ? A CYS 159 ? A CYS 280 ? 1_555 ZN ? G ZN . ? A ZN 405 ? 1_555 SG ? A CYS 162 ? A CYS 283 ? 1_555 111.4 ? 4 SG ? A CYS 138 ? A CYS 259 ? 1_555 ZN ? G ZN . ? A ZN 405 ? 1_555 SG ? A CYS 135 ? A CYS 256 ? 1_555 105.5 ? 5 SG ? A CYS 159 ? A CYS 280 ? 1_555 ZN ? G ZN . ? A ZN 405 ? 1_555 SG ? A CYS 135 ? A CYS 256 ? 1_555 109.4 ? 6 SG ? A CYS 162 ? A CYS 283 ? 1_555 ZN ? G ZN . ? A ZN 405 ? 1_555 SG ? A CYS 135 ? A CYS 256 ? 1_555 96.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-15 2 'Structure model' 1 1 2012-09-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O2A _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CNA _pdbx_validate_close_contact.auth_seq_id_1 401 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 523 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 156 ? ? -112.31 -73.11 2 1 ARG A 158 ? ? 65.10 -5.83 3 1 THR A 284 ? ? 68.54 -1.01 4 1 ASP A 290 ? ? -79.14 25.26 5 1 ALA A 352 ? ? -92.13 -66.30 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 0 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id ARG _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 235 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id CZ _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id ARG _pdbx_unobs_or_zero_occ_atoms.label_seq_id 114 _pdbx_unobs_or_zero_occ_atoms.label_atom_id CZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE CNA 4 'SULFATE ION' SO4 5 'ZINC ION' ZN 6 GLYCEROL GOL 7 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CNA 1 401 1 CNA CNA A . D 4 SO4 1 402 1 SO4 SO4 A . E 4 SO4 1 403 2 SO4 SO4 A . F 4 SO4 1 404 3 SO4 SO4 A . G 5 ZN 1 405 1 ZN ZN A . H 6 GOL 1 406 1 GOL GOL A . I 7 HOH 1 501 1 HOH HOH A . I 7 HOH 2 502 2 HOH HOH A . I 7 HOH 3 503 3 HOH HOH A . I 7 HOH 4 504 4 HOH HOH A . I 7 HOH 5 505 5 HOH HOH A . I 7 HOH 6 506 6 HOH HOH A . I 7 HOH 7 507 7 HOH HOH A . I 7 HOH 8 508 8 HOH HOH A . I 7 HOH 9 509 9 HOH HOH A . I 7 HOH 10 510 10 HOH HOH A . I 7 HOH 11 511 11 HOH HOH A . I 7 HOH 12 512 12 HOH HOH A . I 7 HOH 13 513 13 HOH HOH A . I 7 HOH 14 514 14 HOH HOH A . I 7 HOH 15 515 15 HOH HOH A . I 7 HOH 16 516 16 HOH HOH A . I 7 HOH 17 517 17 HOH HOH A . I 7 HOH 18 518 18 HOH HOH A . I 7 HOH 19 519 19 HOH HOH A . I 7 HOH 20 520 20 HOH HOH A . I 7 HOH 21 521 21 HOH HOH A . I 7 HOH 22 522 22 HOH HOH A . I 7 HOH 23 523 23 HOH HOH A . I 7 HOH 24 524 24 HOH HOH A . I 7 HOH 25 525 25 HOH HOH A . I 7 HOH 26 526 26 HOH HOH A . I 7 HOH 27 527 27 HOH HOH A . I 7 HOH 28 528 28 HOH HOH A . I 7 HOH 29 529 29 HOH HOH A . I 7 HOH 30 530 30 HOH HOH A . I 7 HOH 31 531 31 HOH HOH A . I 7 HOH 32 532 32 HOH HOH A . I 7 HOH 33 533 33 HOH HOH A . I 7 HOH 34 534 34 HOH HOH A . I 7 HOH 35 535 35 HOH HOH A . I 7 HOH 36 536 36 HOH HOH A . I 7 HOH 37 537 37 HOH HOH A . I 7 HOH 38 538 38 HOH HOH A . I 7 HOH 39 539 39 HOH HOH A . I 7 HOH 40 540 40 HOH HOH A . I 7 HOH 41 541 41 HOH HOH A . I 7 HOH 42 542 42 HOH HOH A . I 7 HOH 43 543 43 HOH HOH A . I 7 HOH 44 544 44 HOH HOH A . I 7 HOH 45 545 45 HOH HOH A . I 7 HOH 46 546 46 HOH HOH A . I 7 HOH 47 547 47 HOH HOH A . I 7 HOH 48 548 48 HOH HOH A . I 7 HOH 49 549 49 HOH HOH A . I 7 HOH 50 550 50 HOH HOH A . I 7 HOH 51 551 51 HOH HOH A . I 7 HOH 52 552 52 HOH HOH A . I 7 HOH 53 553 53 HOH HOH A . I 7 HOH 54 554 54 HOH HOH A . I 7 HOH 55 555 55 HOH HOH A . #