data_4FXM
# 
_entry.id   4FXM 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.379 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   4FXM         pdb_00004fxm 10.2210/pdb4fxm/pdb 
NDB   NA1898       ?            ?                   
RCSB  RCSB073480   ?            ?                   
WWPDB D_1000073480 ?            ?                   
# 
_pdbx_database_status.entry_id                        4FXM 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.recvd_initial_deposition_date   2012-07-03 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Nicoludis, J.M.'  1 
'Miller, S.T.'     2 
'Jeffrey, P.'      3 
'Lawton, T.J.'     4 
'Rosenzweig, A.C.' 5 
'Yatsunyk, L.A.'   6 
# 
_citation.id                        primary 
_citation.title                     
'Optimized End-Stacking Provides Specificity of N-Methyl Mesoporphyrin IX for Human Telomeric G-Quadruplex DNA.' 
_citation.journal_abbrev            J.Am.Chem.Soc. 
_citation.journal_volume            134 
_citation.page_first                20446 
_citation.page_last                 20456 
_citation.year                      2012 
_citation.journal_id_ASTM           JACSAT 
_citation.country                   US 
_citation.journal_id_ISSN           0002-7863 
_citation.journal_id_CSD            0004 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   23181361 
_citation.pdbx_database_id_DOI      10.1021/ja3088746 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Nicoludis, J.M.' 1 ? 
primary 'Miller, S.T.'    2 ? 
primary 'Jeffrey, P.D.'   3 ? 
primary 'Barrett, S.P.'   4 ? 
primary 'Rablen, P.R.'    5 ? 
primary 'Lawton, T.J.'    6 ? 
primary 'Yatsunyk, L.A.'  7 ? 
# 
_cell.length_a           50.755 
_cell.length_b           41.980 
_cell.length_c           42.384 
_cell.angle_alpha        90.000 
_cell.angle_beta         90.000 
_cell.angle_gamma        90.000 
_cell.entry_id           4FXM 
_cell.pdbx_unique_axis   ? 
_cell.Z_PDB              4 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.space_group_name_H-M             'P 21 21 2' 
_symmetry.entry_id                         4FXM 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.Int_Tables_number                18 
_symmetry.cell_setting                     ? 
_symmetry.space_group_name_Hall            ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 
;DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3')
;
6983.497 1  ? ? ? 'Human telomeric repeat sequence, Tel22' 
2 non-polymer syn 'POTASSIUM ION'                                                                    39.098   3  ? ? ? ? 
3 non-polymer syn N-METHYLMESOPORPHYRIN                                                              580.716  1  ? ? ? ? 
4 water       nat water                                                                              18.015   53 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       
;(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)
(DG)(DG)
;
_entity_poly.pdbx_seq_one_letter_code_can   AGGGTTAGGGTTAGGGTTAGGG 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DA n 
1 2  DG n 
1 3  DG n 
1 4  DG n 
1 5  DT n 
1 6  DT n 
1 7  DA n 
1 8  DG n 
1 9  DG n 
1 10 DG n 
1 11 DT n 
1 12 DT n 
1 13 DA n 
1 14 DG n 
1 15 DG n 
1 16 DG n 
1 17 DT n 
1 18 DT n 
1 19 DA n 
1 20 DG n 
1 21 DG n 
1 22 DG n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    'Homo sapiens' 
_pdbx_entity_src_syn.organism_common_name   Human 
_pdbx_entity_src_syn.ncbi_taxonomy_id       9606 
_pdbx_entity_src_syn.details                'This sequence occurs naturally in humans.' 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    4FXM 
_struct_ref.pdbx_db_accession          4FXM 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_db_isoform            ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              4FXM 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 22 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             4FXM 
_struct_ref_seq.db_align_beg                  1 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  22 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       1 
_struct_ref_seq.pdbx_auth_seq_align_end       22 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P' 322.208 
HOH non-polymer   . WATER                                ? 'H2 O'            18.015  
K   non-polymer   . 'POTASSIUM ION'                      ? 'K 1'             39.098  
MMP non-polymer   . N-METHYLMESOPORPHYRIN                ? 'C35 H40 N4 O4'   580.716 
# 
_exptl.crystals_number   1 
_exptl.entry_id          4FXM 
_exptl.method            'X-RAY DIFFRACTION' 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_Matthews      3.23 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_percent_sol   61.95 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.pH              7.2 
_exptl_crystal_grow.temp            277 
_exptl_crystal_grow.pdbx_details    
;15% PEG 400, 0.4M ammonium sulfate, 0.05M lithium cacodylate, 0.05M potassium chloride, 0.01M calcium chloride, , pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K
;
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   'ADSC QUANTUM 315r' 
_diffrn_detector.pdbx_collection_date   2012-04-24 
_diffrn_detector.details                
;Cryogenically cooled double crystal monochrometer with horizontal focusing sagittal bend second mono crystal with 4:1 magnification ratio and vertically focusing mirror.
;
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.monochromator                    'double crystal monochrometer' 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.0750 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'NSLS BEAMLINE X29A' 
_diffrn_source.pdbx_wavelength_list        1.0750 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_synchrotron_site       NSLS 
_diffrn_source.pdbx_synchrotron_beamline   X29A 
# 
_reflns.entry_id                     4FXM 
_reflns.observed_criterion_sigma_F   0 
_reflns.observed_criterion_sigma_I   0 
_reflns.d_resolution_high            1.65 
_reflns.d_resolution_low             42.38 
_reflns.number_all                   11379 
_reflns.number_obs                   11364 
_reflns.percent_possible_obs         99.9 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        2.8 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              6.3 
_reflns.R_free_details               ? 
_reflns.limit_h_max                  ? 
_reflns.limit_h_min                  ? 
_reflns.limit_k_max                  ? 
_reflns.limit_k_min                  ? 
_reflns.limit_l_max                  ? 
_reflns.limit_l_min                  ? 
_reflns.observed_criterion_F_max     ? 
_reflns.observed_criterion_F_min     ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_diffrn_id               1 
# 
_reflns_shell.d_res_high             1.65 
_reflns_shell.d_res_low              1.74 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.percent_possible_all   99.9 
_reflns_shell.Rmerge_I_obs           0.462 
_reflns_shell.meanI_over_sigI_obs    2.8 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.pdbx_redundancy        6.3 
_reflns_shell.number_unique_all      1638 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.pdbx_diffrn_id         1 
# 
_refine.entry_id                                 4FXM 
_refine.ls_d_res_high                            1.6510 
_refine.ls_d_res_low                             42.3800 
_refine.pdbx_ls_sigma_F                          0.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.ls_percent_reflns_obs                    99.8300 
_refine.ls_number_reflns_obs                     10820 
_refine.ls_number_reflns_all                     10820 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.details                                  'U VALUES      : REFINED INDIVIDUALLY' 
_refine.ls_R_factor_all                          0.22389 
_refine.ls_R_factor_obs                          0.22389 
_refine.ls_R_factor_R_work                       0.2221 
_refine.ls_wR_factor_R_work                      ? 
_refine.ls_R_factor_R_free                       0.2616 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_percent_reflns_R_free                 4.8000 
_refine.ls_number_reflns_R_free                  544 
_refine.ls_R_factor_R_free_error                 ? 
_refine.B_iso_mean                               34.1048 
_refine.solvent_model_param_bsol                 ? 
_refine.solvent_model_param_ksol                 ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.aniso_B[1][1]                            0.0200 
_refine.aniso_B[2][2]                            -0.0200 
_refine.aniso_B[3][3]                            -0.0000 
_refine.aniso_B[1][2]                            -0.0000 
_refine.aniso_B[1][3]                            -0.0000 
_refine.aniso_B[2][3]                            0.0000 
_refine.correlation_coeff_Fo_to_Fc               0.9580 
_refine.correlation_coeff_Fo_to_Fc_free          0.9470 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.pdbx_overall_ESU_R                       0.0960 
_refine.pdbx_overall_ESU_R_Free                  0.1010 
_refine.overall_SU_ML                            0.0640 
_refine.overall_SU_B                             1.8710 
_refine.solvent_model_details                    MASK 
_refine.pdbx_solvent_vdw_probe_radii             1.2000 
_refine.pdbx_solvent_ion_probe_radii             0.8000 
_refine.pdbx_solvent_shrinkage_radii             0.8000 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.pdbx_starting_model                      'PDB ENTRY 3T5E' 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.B_iso_max                                116.650 
_refine.B_iso_min                                15.390 
_refine.pdbx_overall_phase_error                 ? 
_refine.occupancy_max                            1.000 
_refine.occupancy_min                            0.500 
_refine.pdbx_ls_sigma_I                          0.0 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   465 
_refine_hist.pdbx_number_atoms_ligand         46 
_refine_hist.number_atoms_solvent             53 
_refine_hist.number_atoms_total               564 
_refine_hist.d_res_high                       1.6510 
_refine_hist.d_res_low                        42.3800 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.number 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.pdbx_restraint_function 
_refine_ls_restr.pdbx_refine_id 
r_bond_refined_d     571 0.020 0.011 ? ? 'X-RAY DIFFRACTION' 
r_angle_refined_deg  882 3.668 1.463 ? ? 'X-RAY DIFFRACTION' 
r_chiral_restr       67  0.420 0.200 ? ? 'X-RAY DIFFRACTION' 
r_gen_planes_refined 296 0.026 0.020 ? ? 'X-RAY DIFFRACTION' 
# 
_refine_ls_shell.d_res_high                       1.6510 
_refine_ls_shell.d_res_low                        1.6940 
_refine_ls_shell.pdbx_total_number_of_bins_used   20 
_refine_ls_shell.percent_reflns_obs               99.3400 
_refine_ls_shell.number_reflns_R_work             714 
_refine_ls_shell.R_factor_all                     ? 
_refine_ls_shell.R_factor_R_work                  0.3470 
_refine_ls_shell.R_factor_R_free                  0.3050 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             34 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.number_reflns_all                748 
_refine_ls_shell.number_reflns_obs                748 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
# 
_struct.entry_id                  4FXM 
_struct.title                     
'Crystal structure of the complex of a human telomeric repeat G-quadruplex and N-methyl mesoporphyrin IX (P21212)' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        4FXM 
_struct_keywords.text            'Parallel quadruplex, N-methyl mesoporphyrin IX, DNA' 
_struct_keywords.pdbx_keywords   DNA 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 2 ? 
D N N 2 ? 
E N N 3 ? 
F N N 4 ? 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? A DG 2  O6 ? ? ? 1_555 B K  .  K  ? ? A DG 2  A K  101 1_555 ? ? ? ? ? ? ?           2.812 ? ? 
metalc2  metalc ? ? A DG 2  O6 ? ? ? 1_555 D K  .  K  ? ? A DG 2  A K  103 1_555 ? ? ? ? ? ? ?           2.507 ? ? 
metalc3  metalc ? ? A DG 3  O6 ? ? ? 1_555 B K  .  K  ? ? A DG 3  A K  101 1_555 ? ? ? ? ? ? ?           2.730 ? ? 
metalc4  metalc ? ? A DG 3  O6 ? ? ? 1_555 C K  .  K  ? ? A DG 3  A K  102 1_555 ? ? ? ? ? ? ?           2.939 ? ? 
metalc5  metalc ? ? A DG 4  O6 ? ? ? 1_555 C K  .  K  ? ? A DG 4  A K  102 1_555 ? ? ? ? ? ? ?           2.687 ? ? 
metalc6  metalc ? ? A DG 8  O6 ? ? ? 1_555 B K  .  K  ? ? A DG 8  A K  101 1_555 ? ? ? ? ? ? ?           2.799 ? ? 
metalc7  metalc ? ? A DG 8  O6 ? ? ? 1_555 D K  .  K  ? ? A DG 8  A K  103 1_555 ? ? ? ? ? ? ?           2.679 ? ? 
metalc8  metalc ? ? A DG 9  O6 ? ? ? 1_555 B K  .  K  ? ? A DG 9  A K  101 1_555 ? ? ? ? ? ? ?           2.708 ? ? 
metalc9  metalc ? ? A DG 9  O6 ? ? ? 1_555 C K  .  K  ? ? A DG 9  A K  102 1_555 ? ? ? ? ? ? ?           2.934 ? ? 
metalc10 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K  .  K  ? ? A DG 10 A K  102 1_555 ? ? ? ? ? ? ?           2.699 ? ? 
metalc11 metalc ? ? A DG 14 O6 ? ? ? 1_555 B K  .  K  ? ? A DG 14 A K  101 1_555 ? ? ? ? ? ? ?           2.833 ? ? 
metalc12 metalc ? ? A DG 14 O6 ? ? ? 1_555 D K  .  K  ? ? A DG 14 A K  103 1_555 ? ? ? ? ? ? ?           2.703 ? ? 
metalc13 metalc ? ? A DG 15 O6 ? ? ? 1_555 B K  .  K  ? ? A DG 15 A K  101 1_555 ? ? ? ? ? ? ?           2.695 ? ? 
metalc14 metalc ? ? A DG 15 O6 ? ? ? 1_555 C K  .  K  ? ? A DG 15 A K  102 1_555 ? ? ? ? ? ? ?           2.930 ? ? 
metalc15 metalc ? ? A DG 16 O6 ? ? ? 1_555 C K  .  K  ? ? A DG 16 A K  102 1_555 ? ? ? ? ? ? ?           2.719 ? ? 
metalc16 metalc ? ? A DG 20 O6 ? ? ? 1_555 B K  .  K  ? ? A DG 20 A K  101 1_555 ? ? ? ? ? ? ?           2.808 ? ? 
metalc17 metalc ? ? A DG 20 O6 ? ? ? 1_555 D K  .  K  ? ? A DG 20 A K  103 1_555 ? ? ? ? ? ? ?           2.529 ? ? 
metalc18 metalc ? ? A DG 21 O6 ? ? ? 1_555 B K  .  K  ? ? A DG 21 A K  101 1_555 ? ? ? ? ? ? ?           2.727 ? ? 
metalc19 metalc ? ? A DG 21 O6 ? ? ? 1_555 C K  .  K  ? ? A DG 21 A K  102 1_555 ? ? ? ? ? ? ?           2.910 ? ? 
metalc20 metalc ? ? A DG 22 O6 ? ? ? 1_555 C K  .  K  ? ? A DG 22 A K  102 1_555 ? ? ? ? ? ? ?           2.757 ? ? 
hydrog1  hydrog ? ? A DG 2  N1 ? ? ? 1_555 A DG 8  O6 ? ? A DG 2  A DG 8   1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog2  hydrog ? ? A DG 2  N2 ? ? ? 1_555 A DG 8  N7 ? ? A DG 2  A DG 8   1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog3  hydrog ? ? A DG 2  N7 ? ? ? 1_555 A DG 20 N2 ? ? A DG 2  A DG 20  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog4  hydrog ? ? A DG 2  O6 ? ? ? 1_555 A DG 20 N1 ? ? A DG 2  A DG 20  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog5  hydrog ? ? A DG 3  N1 ? ? ? 1_555 A DG 9  O6 ? ? A DG 3  A DG 9   1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog6  hydrog ? ? A DG 3  N2 ? ? ? 1_555 A DG 9  N7 ? ? A DG 3  A DG 9   1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog7  hydrog ? ? A DG 3  N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 3  A DG 21  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog8  hydrog ? ? A DG 3  O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 3  A DG 21  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog9  hydrog ? ? A DG 4  N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 4  A DG 10  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog10 hydrog ? ? A DG 4  N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 4  A DG 10  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog11 hydrog ? ? A DG 4  N7 ? ? ? 1_555 A DG 22 N2 ? ? A DG 4  A DG 22  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog12 hydrog ? ? A DG 4  O6 ? ? ? 1_555 A DG 22 N1 ? ? A DG 4  A DG 22  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog13 hydrog ? ? A DG 8  N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 8  A DG 14  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog14 hydrog ? ? A DG 8  N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 8  A DG 14  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog15 hydrog ? ? A DG 9  N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 9  A DG 15  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog16 hydrog ? ? A DG 9  N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 9  A DG 15  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog17 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 16 O6 ? ? A DG 10 A DG 16  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog18 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 16 N7 ? ? A DG 10 A DG 16  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog19 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 20 O6 ? ? A DG 14 A DG 20  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog20 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 20 N7 ? ? A DG 14 A DG 20  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog21 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 15 A DG 21  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog22 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 15 A DG 21  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog23 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 16 A DG 22  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog24 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 16 A DG 22  1_555 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A K   101 ? 11 'BINDING SITE FOR RESIDUE K A 101'   
AC2 Software A K   102 ? 10 'BINDING SITE FOR RESIDUE K A 102'   
AC3 Software A K   103 ? 10 'BINDING SITE FOR RESIDUE K A 103'   
AC4 Software A MMP 104 ? 10 'BINDING SITE FOR RESIDUE MMP A 104' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 11 DG  A 2  ? DG  A 2   . ? 1_555 ? 
2  AC1 11 DG  A 3  ? DG  A 3   . ? 1_555 ? 
3  AC1 11 DG  A 8  ? DG  A 8   . ? 1_555 ? 
4  AC1 11 DG  A 9  ? DG  A 9   . ? 1_555 ? 
5  AC1 11 DG  A 14 ? DG  A 14  . ? 1_555 ? 
6  AC1 11 DG  A 15 ? DG  A 15  . ? 1_555 ? 
7  AC1 11 DG  A 20 ? DG  A 20  . ? 1_555 ? 
8  AC1 11 DG  A 21 ? DG  A 21  . ? 1_555 ? 
9  AC1 11 K   C .  ? K   A 102 . ? 1_555 ? 
10 AC1 11 K   D .  ? K   A 103 . ? 1_555 ? 
11 AC1 11 K   D .  ? K   A 103 . ? 2_555 ? 
12 AC2 10 DG  A 3  ? DG  A 3   . ? 1_555 ? 
13 AC2 10 DG  A 4  ? DG  A 4   . ? 1_555 ? 
14 AC2 10 DG  A 9  ? DG  A 9   . ? 1_555 ? 
15 AC2 10 DG  A 10 ? DG  A 10  . ? 1_555 ? 
16 AC2 10 DG  A 15 ? DG  A 15  . ? 1_555 ? 
17 AC2 10 DG  A 16 ? DG  A 16  . ? 1_555 ? 
18 AC2 10 DG  A 21 ? DG  A 21  . ? 1_555 ? 
19 AC2 10 DG  A 22 ? DG  A 22  . ? 1_555 ? 
20 AC2 10 K   B .  ? K   A 101 . ? 1_555 ? 
21 AC2 10 MMP E .  ? MMP A 104 . ? 1_555 ? 
22 AC3 10 DG  A 2  ? DG  A 2   . ? 2_555 ? 
23 AC3 10 DG  A 2  ? DG  A 2   . ? 1_555 ? 
24 AC3 10 DG  A 8  ? DG  A 8   . ? 2_555 ? 
25 AC3 10 DG  A 8  ? DG  A 8   . ? 1_555 ? 
26 AC3 10 DG  A 14 ? DG  A 14  . ? 1_555 ? 
27 AC3 10 DG  A 14 ? DG  A 14  . ? 2_555 ? 
28 AC3 10 DG  A 20 ? DG  A 20  . ? 2_555 ? 
29 AC3 10 DG  A 20 ? DG  A 20  . ? 1_555 ? 
30 AC3 10 K   B .  ? K   A 101 . ? 2_555 ? 
31 AC3 10 K   B .  ? K   A 101 . ? 1_555 ? 
32 AC4 10 DA  A 1  ? DA  A 1   . ? 4_455 ? 
33 AC4 10 DG  A 3  ? DG  A 3   . ? 1_555 ? 
34 AC4 10 DG  A 4  ? DG  A 4   . ? 1_555 ? 
35 AC4 10 DG  A 10 ? DG  A 10  . ? 1_555 ? 
36 AC4 10 DT  A 12 ? DT  A 12  . ? 3_455 ? 
37 AC4 10 DG  A 16 ? DG  A 16  . ? 1_555 ? 
38 AC4 10 DG  A 22 ? DG  A 22  . ? 1_555 ? 
39 AC4 10 K   C .  ? K   A 102 . ? 1_555 ? 
40 AC4 10 HOH F .  ? HOH A 201 . ? 1_555 ? 
41 AC4 10 HOH F .  ? HOH A 242 . ? 1_555 ? 
# 
_atom_sites.entry_id                    4FXM 
_atom_sites.fract_transf_matrix[1][1]   0.019702 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   -0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.023821 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   -0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.023594 
_atom_sites.fract_transf_vector[1]      0.000000 
_atom_sites.fract_transf_vector[2]      0.000000 
_atom_sites.fract_transf_vector[3]      0.000000 
# 
loop_
_atom_type.symbol 
C 
K 
N 
O 
P 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DA 1  1  1  DA DA A . n 
A 1 2  DG 2  2  2  DG DG A . n 
A 1 3  DG 3  3  3  DG DG A . n 
A 1 4  DG 4  4  4  DG DG A . n 
A 1 5  DT 5  5  5  DT DT A . n 
A 1 6  DT 6  6  6  DT DT A . n 
A 1 7  DA 7  7  7  DA DA A . n 
A 1 8  DG 8  8  8  DG DG A . n 
A 1 9  DG 9  9  9  DG DG A . n 
A 1 10 DG 10 10 10 DG DG A . n 
A 1 11 DT 11 11 11 DT DT A . n 
A 1 12 DT 12 12 12 DT DT A . n 
A 1 13 DA 13 13 13 DA DA A . n 
A 1 14 DG 14 14 14 DG DG A . n 
A 1 15 DG 15 15 15 DG DG A . n 
A 1 16 DG 16 16 16 DG DG A . n 
A 1 17 DT 17 17 17 DT DT A . n 
A 1 18 DT 18 18 18 DT DT A . n 
A 1 19 DA 19 19 19 DA DA A . n 
A 1 20 DG 20 20 20 DG DG A . n 
A 1 21 DG 21 21 21 DG DG A . n 
A 1 22 DG 22 22 22 DG DG A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
B 2 K   1  101 1  K   K   A . 
C 2 K   1  102 2  K   K   A . 
D 2 K   1  103 3  K   K   A . 
E 3 MMP 1  104 1  MMP MMP A . 
F 4 HOH 1  201 1  HOH HOH A . 
F 4 HOH 2  202 2  HOH HOH A . 
F 4 HOH 3  203 3  HOH HOH A . 
F 4 HOH 4  204 4  HOH HOH A . 
F 4 HOH 5  205 5  HOH HOH A . 
F 4 HOH 6  206 6  HOH HOH A . 
F 4 HOH 7  207 7  HOH HOH A . 
F 4 HOH 8  208 8  HOH HOH A . 
F 4 HOH 9  209 9  HOH HOH A . 
F 4 HOH 10 210 10 HOH HOH A . 
F 4 HOH 11 211 11 HOH HOH A . 
F 4 HOH 12 212 12 HOH HOH A . 
F 4 HOH 13 213 13 HOH HOH A . 
F 4 HOH 14 214 14 HOH HOH A . 
F 4 HOH 15 215 15 HOH HOH A . 
F 4 HOH 16 216 16 HOH HOH A . 
F 4 HOH 17 217 17 HOH HOH A . 
F 4 HOH 18 218 18 HOH HOH A . 
F 4 HOH 19 219 19 HOH HOH A . 
F 4 HOH 20 220 20 HOH HOH A . 
F 4 HOH 21 221 21 HOH HOH A . 
F 4 HOH 22 222 22 HOH HOH A . 
F 4 HOH 23 223 23 HOH HOH A . 
F 4 HOH 24 224 24 HOH HOH A . 
F 4 HOH 25 225 25 HOH HOH A . 
F 4 HOH 26 226 26 HOH HOH A . 
F 4 HOH 27 227 27 HOH HOH A . 
F 4 HOH 28 228 28 HOH HOH A . 
F 4 HOH 29 229 29 HOH HOH A . 
F 4 HOH 30 230 30 HOH HOH A . 
F 4 HOH 31 231 31 HOH HOH A . 
F 4 HOH 32 232 32 HOH HOH A . 
F 4 HOH 33 233 33 HOH HOH A . 
F 4 HOH 34 234 34 HOH HOH A . 
F 4 HOH 35 235 35 HOH HOH A . 
F 4 HOH 36 236 36 HOH HOH A . 
F 4 HOH 37 237 37 HOH HOH A . 
F 4 HOH 38 238 38 HOH HOH A . 
F 4 HOH 39 239 39 HOH HOH A . 
F 4 HOH 40 240 40 HOH HOH A . 
F 4 HOH 41 241 41 HOH HOH A . 
F 4 HOH 42 242 42 HOH HOH A . 
F 4 HOH 43 243 43 HOH HOH A . 
F 4 HOH 44 244 44 HOH HOH A . 
F 4 HOH 45 245 45 HOH HOH A . 
F 4 HOH 46 246 46 HOH HOH A . 
F 4 HOH 47 247 47 HOH HOH A . 
F 4 HOH 48 248 48 HOH HOH A . 
F 4 HOH 49 249 49 HOH HOH A . 
F 4 HOH 50 250 50 HOH HOH A . 
F 4 HOH 51 251 51 HOH HOH A . 
F 4 HOH 52 252 52 HOH HOH A . 
F 4 HOH 53 253 53 HOH HOH A . 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_and_software_defined_assembly 
_pdbx_struct_assembly.method_details       PISA 
_pdbx_struct_assembly.oligomeric_details   monomeric 
_pdbx_struct_assembly.oligomeric_count     1 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_struct_special_symmetry.id 
_pdbx_struct_special_symmetry.PDB_model_num 
_pdbx_struct_special_symmetry.auth_asym_id 
_pdbx_struct_special_symmetry.auth_comp_id 
_pdbx_struct_special_symmetry.auth_seq_id 
_pdbx_struct_special_symmetry.PDB_ins_code 
_pdbx_struct_special_symmetry.label_asym_id 
_pdbx_struct_special_symmetry.label_comp_id 
_pdbx_struct_special_symmetry.label_seq_id 
1 1 A HOH 206 ? F HOH . 
2 1 A HOH 233 ? F HOH . 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O6 ? A DG 2  ? A DG 2  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 3  ? A DG 3  ? 1_555 75.6  ? 
2  O6 ? A DG 2  ? A DG 2  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 8  ? A DG 8  ? 1_555 68.2  ? 
3  O6 ? A DG 3  ? A DG 3  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 8  ? A DG 8  ? 1_555 90.1  ? 
4  O6 ? A DG 2  ? A DG 2  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 9  ? A DG 9  ? 1_555 129.6 ? 
5  O6 ? A DG 3  ? A DG 3  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 9  ? A DG 9  ? 1_555 71.3  ? 
6  O6 ? A DG 8  ? A DG 8  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 9  ? A DG 9  ? 1_555 74.9  ? 
7  O6 ? A DG 2  ? A DG 2  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 106.2 ? 
8  O6 ? A DG 3  ? A DG 3  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 155.4 ? 
9  O6 ? A DG 8  ? A DG 8  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 68.9  ? 
10 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 90.5  ? 
11 O6 ? A DG 2  ? A DG 2  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 156.2 ? 
12 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 113.0 ? 
13 O6 ? A DG 8  ? A DG 8  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 131.4 ? 
14 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 73.5  ? 
15 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 75.4  ? 
16 O6 ? A DG 2  ? A DG 2  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 69.9  ? 
17 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 131.9 ? 
18 O6 ? A DG 8  ? A DG 8  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 106.5 ? 
19 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 156.2 ? 
20 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 68.9  ? 
21 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 89.5  ? 
22 O6 ? A DG 2  ? A DG 2  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 91.0  ? 
23 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 71.4  ? 
24 O6 ? A DG 8  ? A DG 8  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 155.3 ? 
25 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 112.4 ? 
26 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 132.3 ? 
27 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 72.3  ? 
28 O6 ? A DG 20 ? A DG 20 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 76.6  ? 
29 O6 ? A DG 2  ? A DG 2  ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 8  ? A DG 8  ? 1_555 74.6  ? 
30 O6 ? A DG 2  ? A DG 2  ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 120.1 ? 
31 O6 ? A DG 8  ? A DG 8  ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 72.6  ? 
32 O6 ? A DG 2  ? A DG 2  ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 79.5  ? 
33 O6 ? A DG 8  ? A DG 8  ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 119.2 ? 
34 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 75.0  ? 
35 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 4  ? A DG 4  ? 1_555 70.8  ? 
36 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9  ? A DG 9  ? 1_555 65.3  ? 
37 O6 ? A DG 4  ? A DG 4  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9  ? A DG 9  ? 1_555 88.5  ? 
38 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 126.5 ? 
39 O6 ? A DG 4  ? A DG 4  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 77.3  ? 
40 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 72.2  ? 
41 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 100.8 ? 
42 O6 ? A DG 4  ? A DG 4  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 155.1 ? 
43 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 66.9  ? 
44 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 90.6  ? 
45 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 156.9 ? 
46 O6 ? A DG 4  ? A DG 4  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 123.7 ? 
47 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 127.8 ? 
48 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 76.4  ? 
49 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 72.9  ? 
50 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 65.9  ? 
51 O6 ? A DG 4  ? A DG 4  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 125.7 ? 
52 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 101.2 ? 
53 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 156.5 ? 
54 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 66.4  ? 
55 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 91.5  ? 
56 O6 ? A DG 3  ? A DG 3  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 90.8  ? 
57 O6 ? A DG 4  ? A DG 4  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 76.8  ? 
58 O6 ? A DG 9  ? A DG 9  ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 155.2 ? 
59 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 122.4 ? 
60 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 127.6 ? 
61 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 76.9  ? 
62 O6 ? A DG 21 ? A DG 21 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 72.8  ? 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2012-12-26 
2 'Structure model' 1 1 2013-01-02 
3 'Structure model' 1 2 2023-09-13 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Database references'    
2 3 'Structure model' 'Data collection'        
3 3 'Structure model' 'Database references'    
4 3 'Structure model' 'Derived calculations'   
5 3 'Structure model' 'Refinement description' 
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 3 'Structure model' chem_comp_atom                
2 3 'Structure model' chem_comp_bond                
3 3 'Structure model' database_2                    
4 3 'Structure model' pdbx_initial_refinement_model 
5 3 'Structure model' pdbx_struct_conn_angle        
6 3 'Structure model' struct_conn                   
7 3 'Structure model' struct_site                   
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  3 'Structure model' '_database_2.pdbx_DOI'                        
2  3 'Structure model' '_database_2.pdbx_database_accession'         
3  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
4  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
5  3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'   
6  3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 
7  3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
8  3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
9  3 'Structure model' '_pdbx_struct_conn_angle.value'               
10 3 'Structure model' '_struct_conn.pdbx_dist_value'                
11 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
12 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
13 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
14 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
15 3 'Structure model' '_struct_site.pdbx_auth_asym_id'              
16 3 'Structure model' '_struct_site.pdbx_auth_comp_id'              
17 3 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
loop_
_software.pdbx_ordinal 
_software.name 
_software.version 
_software.date 
_software.type 
_software.contact_author 
_software.contact_author_email 
_software.classification 
_software.location 
_software.language 
_software.citation_id 
1 REFMAC      5.6.0117 ?                program 'Garib N. Murshudov' garib@ysbl.york.ac.uk    refinement        
http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 
2 PDB_EXTRACT 3.11     'August 3, 2011' package PDB                  deposit@deposit.rcsb.org 'data extraction' 
http://sw-tools.pdb.org/apps/PDB_EXTRACT/    C++        ? 
3 CBASS       .        ?                ?       ?                    ?                        'data collection' ? ?          ? 
4 MOSFLM      .        ?                ?       ?                    ?                        'data reduction'  ? ?          ? 
5 SCALA       .        ?                ?       ?                    ?                        'data scaling'    ? ?          ? 
6 PHASER      .        ?                ?       ?                    ?                        phasing           ? ?          ? 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 "O3'" A DT 6  ? ? P A DA 7  ? ? 1.688 1.607 0.081 0.012 Y 
2 1 "O3'" A DG 10 ? ? P A DT 11 ? ? 1.715 1.607 0.108 0.012 Y 
3 1 "O3'" A DA 13 ? ? P A DG 14 ? ? 1.691 1.607 0.084 0.012 Y 
4 1 "O3'" A DT 18 ? ? P A DA 19 ? ? 1.725 1.607 0.118 0.012 Y 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "C3'" A DA 1  ? ? "O3'" A DA 1  ? ? P     A DG 2  ? ? 109.29 119.70 -10.41 1.20 Y 
2  1 "O3'" A DA 1  ? ? P     A DG 2  ? ? "O5'" A DG 2  ? ? 87.52  104.00 -16.48 1.90 Y 
3  1 "O3'" A DG 2  ? ? P     A DG 3  ? ? OP2   A DG 3  ? ? 124.03 110.50 13.53  1.10 Y 
4  1 "O5'" A DG 3  ? ? P     A DG 3  ? ? OP2   A DG 3  ? ? 96.71  105.70 -8.99  0.90 N 
5  1 "O3'" A DG 3  ? ? P     A DG 4  ? ? OP2   A DG 4  ? ? 119.37 110.50 8.87   1.10 Y 
6  1 "O5'" A DT 5  ? ? "C5'" A DT 5  ? ? "C4'" A DT 5  ? ? 104.20 109.40 -5.20  0.80 N 
7  1 "O3'" A DT 5  ? ? P     A DT 6  ? ? OP2   A DT 6  ? ? 118.84 110.50 8.34   1.10 Y 
8  1 "O5'" A DG 8  ? ? P     A DG 8  ? ? OP2   A DG 8  ? ? 99.97  105.70 -5.73  0.90 N 
9  1 "O5'" A DG 8  ? ? "C5'" A DG 8  ? ? "C4'" A DG 8  ? ? 104.32 109.40 -5.08  0.80 N 
10 1 "C3'" A DG 8  ? ? "O3'" A DG 8  ? ? P     A DG 9  ? ? 112.30 119.70 -7.40  1.20 Y 
11 1 "O3'" A DG 8  ? ? P     A DG 9  ? ? OP2   A DG 9  ? ? 120.66 110.50 10.16  1.10 Y 
12 1 "C3'" A DG 10 ? ? "O3'" A DG 10 ? ? P     A DT 11 ? ? 111.50 119.70 -8.20  1.20 Y 
13 1 "O5'" A DT 12 ? ? P     A DT 12 ? ? OP1   A DT 12 ? ? 98.43  105.70 -7.27  0.90 N 
14 1 "O3'" A DA 13 ? ? P     A DG 14 ? ? OP2   A DG 14 ? ? 118.24 110.50 7.74   1.10 Y 
15 1 "O5'" A DG 14 ? ? P     A DG 14 ? ? OP2   A DG 14 ? ? 90.16  105.70 -15.54 0.90 N 
16 1 "O5'" A DG 14 ? ? "C5'" A DG 14 ? ? "C4'" A DG 14 ? ? 104.47 109.40 -4.93  0.80 N 
17 1 "O3'" A DG 14 ? ? P     A DG 15 ? ? OP2   A DG 15 ? ? 121.32 110.50 10.82  1.10 Y 
18 1 "O3'" A DG 15 ? ? P     A DG 16 ? ? OP2   A DG 16 ? ? 118.12 110.50 7.62   1.10 Y 
19 1 "O5'" A DT 17 ? ? P     A DT 17 ? ? OP1   A DT 17 ? ? 99.37  105.70 -6.33  0.90 N 
20 1 "O3'" A DT 17 ? ? P     A DT 18 ? ? OP2   A DT 18 ? ? 118.21 110.50 7.71   1.10 Y 
21 1 "O5'" A DG 20 ? ? P     A DG 20 ? ? OP2   A DG 20 ? ? 99.54  105.70 -6.16  0.90 N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA  OP3    O N N 1   
DA  P      P N N 2   
DA  OP1    O N N 3   
DA  OP2    O N N 4   
DA  "O5'"  O N N 5   
DA  "C5'"  C N N 6   
DA  "C4'"  C N R 7   
DA  "O4'"  O N N 8   
DA  "C3'"  C N S 9   
DA  "O3'"  O N N 10  
DA  "C2'"  C N N 11  
DA  "C1'"  C N R 12  
DA  N9     N Y N 13  
DA  C8     C Y N 14  
DA  N7     N Y N 15  
DA  C5     C Y N 16  
DA  C6     C Y N 17  
DA  N6     N N N 18  
DA  N1     N Y N 19  
DA  C2     C Y N 20  
DA  N3     N Y N 21  
DA  C4     C Y N 22  
DA  HOP3   H N N 23  
DA  HOP2   H N N 24  
DA  "H5'"  H N N 25  
DA  "H5''" H N N 26  
DA  "H4'"  H N N 27  
DA  "H3'"  H N N 28  
DA  "HO3'" H N N 29  
DA  "H2'"  H N N 30  
DA  "H2''" H N N 31  
DA  "H1'"  H N N 32  
DA  H8     H N N 33  
DA  H61    H N N 34  
DA  H62    H N N 35  
DA  H2     H N N 36  
DG  OP3    O N N 37  
DG  P      P N N 38  
DG  OP1    O N N 39  
DG  OP2    O N N 40  
DG  "O5'"  O N N 41  
DG  "C5'"  C N N 42  
DG  "C4'"  C N R 43  
DG  "O4'"  O N N 44  
DG  "C3'"  C N S 45  
DG  "O3'"  O N N 46  
DG  "C2'"  C N N 47  
DG  "C1'"  C N R 48  
DG  N9     N Y N 49  
DG  C8     C Y N 50  
DG  N7     N Y N 51  
DG  C5     C Y N 52  
DG  C6     C N N 53  
DG  O6     O N N 54  
DG  N1     N N N 55  
DG  C2     C N N 56  
DG  N2     N N N 57  
DG  N3     N N N 58  
DG  C4     C Y N 59  
DG  HOP3   H N N 60  
DG  HOP2   H N N 61  
DG  "H5'"  H N N 62  
DG  "H5''" H N N 63  
DG  "H4'"  H N N 64  
DG  "H3'"  H N N 65  
DG  "HO3'" H N N 66  
DG  "H2'"  H N N 67  
DG  "H2''" H N N 68  
DG  "H1'"  H N N 69  
DG  H8     H N N 70  
DG  H1     H N N 71  
DG  H21    H N N 72  
DG  H22    H N N 73  
DT  OP3    O N N 74  
DT  P      P N N 75  
DT  OP1    O N N 76  
DT  OP2    O N N 77  
DT  "O5'"  O N N 78  
DT  "C5'"  C N N 79  
DT  "C4'"  C N R 80  
DT  "O4'"  O N N 81  
DT  "C3'"  C N S 82  
DT  "O3'"  O N N 83  
DT  "C2'"  C N N 84  
DT  "C1'"  C N R 85  
DT  N1     N N N 86  
DT  C2     C N N 87  
DT  O2     O N N 88  
DT  N3     N N N 89  
DT  C4     C N N 90  
DT  O4     O N N 91  
DT  C5     C N N 92  
DT  C7     C N N 93  
DT  C6     C N N 94  
DT  HOP3   H N N 95  
DT  HOP2   H N N 96  
DT  "H5'"  H N N 97  
DT  "H5''" H N N 98  
DT  "H4'"  H N N 99  
DT  "H3'"  H N N 100 
DT  "HO3'" H N N 101 
DT  "H2'"  H N N 102 
DT  "H2''" H N N 103 
DT  "H1'"  H N N 104 
DT  H3     H N N 105 
DT  H71    H N N 106 
DT  H72    H N N 107 
DT  H73    H N N 108 
DT  H6     H N N 109 
HOH O      O N N 110 
HOH H1     H N N 111 
HOH H2     H N N 112 
K   K      K N N 113 
MMP C1     C N N 114 
MMP N1     N Y N 115 
MMP C11    C Y N 116 
MMP C12    C Y N 117 
MMP C13    C Y N 118 
MMP C14    C Y N 119 
MMP C15    C Y N 120 
MMP C16    C N N 121 
MMP C17    C N N 122 
MMP C18    C N N 123 
MMP N2     N Y N 124 
MMP C21    C Y N 125 
MMP C22    C N N 126 
MMP C23    C N N 127 
MMP C24    C Y N 128 
MMP C25    C Y N 129 
MMP C26    C N N 130 
MMP C27    C N N 131 
MMP C28    C N N 132 
MMP N3     N Y N 133 
MMP C31    C Y N 134 
MMP C32    C Y N 135 
MMP C33    C Y N 136 
MMP C34    C Y N 137 
MMP C35    C Y N 138 
MMP C36    C N N 139 
MMP C37    C N N 140 
MMP C38    C N N 141 
MMP C39    C N N 142 
MMP O31    O N N 143 
MMP O32    O N N 144 
MMP N4     N Y N 145 
MMP C41    C Y N 146 
MMP C42    C N N 147 
MMP C43    C N N 148 
MMP C44    C Y N 149 
MMP C45    C Y N 150 
MMP C46    C N N 151 
MMP C47    C N N 152 
MMP C48    C N N 153 
MMP C49    C N N 154 
MMP O41    O N N 155 
MMP O42    O N N 156 
MMP H11    H N N 157 
MMP H12    H N N 158 
MMP H13    H N N 159 
MMP H15    H N N 160 
MMP H161   H N N 161 
MMP H162   H N N 162 
MMP H163   H N N 163 
MMP H171   H N N 164 
MMP H172   H N N 165 
MMP H181   H N N 166 
MMP H182   H N N 167 
MMP H183   H N N 168 
MMP H25    H N N 169 
MMP H261   H N N 170 
MMP H262   H N N 171 
MMP H263   H N N 172 
MMP H271   H N N 173 
MMP H272   H N N 174 
MMP H281   H N N 175 
MMP H282   H N N 176 
MMP H283   H N N 177 
MMP HN3    H N N 178 
MMP H35    H N N 179 
MMP H361   H N N 180 
MMP H362   H N N 181 
MMP H363   H N N 182 
MMP H371   H N N 183 
MMP H372   H N N 184 
MMP H381   H N N 185 
MMP H382   H N N 186 
MMP HO31   H N N 187 
MMP H45    H N N 188 
MMP H461   H N N 189 
MMP H462   H N N 190 
MMP H463   H N N 191 
MMP H471   H N N 192 
MMP H472   H N N 193 
MMP H481   H N N 194 
MMP H482   H N N 195 
MMP HO41   H N N 196 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DG  OP3   P      sing N N 39  
DG  OP3   HOP3   sing N N 40  
DG  P     OP1    doub N N 41  
DG  P     OP2    sing N N 42  
DG  P     "O5'"  sing N N 43  
DG  OP2   HOP2   sing N N 44  
DG  "O5'" "C5'"  sing N N 45  
DG  "C5'" "C4'"  sing N N 46  
DG  "C5'" "H5'"  sing N N 47  
DG  "C5'" "H5''" sing N N 48  
DG  "C4'" "O4'"  sing N N 49  
DG  "C4'" "C3'"  sing N N 50  
DG  "C4'" "H4'"  sing N N 51  
DG  "O4'" "C1'"  sing N N 52  
DG  "C3'" "O3'"  sing N N 53  
DG  "C3'" "C2'"  sing N N 54  
DG  "C3'" "H3'"  sing N N 55  
DG  "O3'" "HO3'" sing N N 56  
DG  "C2'" "C1'"  sing N N 57  
DG  "C2'" "H2'"  sing N N 58  
DG  "C2'" "H2''" sing N N 59  
DG  "C1'" N9     sing N N 60  
DG  "C1'" "H1'"  sing N N 61  
DG  N9    C8     sing Y N 62  
DG  N9    C4     sing Y N 63  
DG  C8    N7     doub Y N 64  
DG  C8    H8     sing N N 65  
DG  N7    C5     sing Y N 66  
DG  C5    C6     sing N N 67  
DG  C5    C4     doub Y N 68  
DG  C6    O6     doub N N 69  
DG  C6    N1     sing N N 70  
DG  N1    C2     sing N N 71  
DG  N1    H1     sing N N 72  
DG  C2    N2     sing N N 73  
DG  C2    N3     doub N N 74  
DG  N2    H21    sing N N 75  
DG  N2    H22    sing N N 76  
DG  N3    C4     sing N N 77  
DT  OP3   P      sing N N 78  
DT  OP3   HOP3   sing N N 79  
DT  P     OP1    doub N N 80  
DT  P     OP2    sing N N 81  
DT  P     "O5'"  sing N N 82  
DT  OP2   HOP2   sing N N 83  
DT  "O5'" "C5'"  sing N N 84  
DT  "C5'" "C4'"  sing N N 85  
DT  "C5'" "H5'"  sing N N 86  
DT  "C5'" "H5''" sing N N 87  
DT  "C4'" "O4'"  sing N N 88  
DT  "C4'" "C3'"  sing N N 89  
DT  "C4'" "H4'"  sing N N 90  
DT  "O4'" "C1'"  sing N N 91  
DT  "C3'" "O3'"  sing N N 92  
DT  "C3'" "C2'"  sing N N 93  
DT  "C3'" "H3'"  sing N N 94  
DT  "O3'" "HO3'" sing N N 95  
DT  "C2'" "C1'"  sing N N 96  
DT  "C2'" "H2'"  sing N N 97  
DT  "C2'" "H2''" sing N N 98  
DT  "C1'" N1     sing N N 99  
DT  "C1'" "H1'"  sing N N 100 
DT  N1    C2     sing N N 101 
DT  N1    C6     sing N N 102 
DT  C2    O2     doub N N 103 
DT  C2    N3     sing N N 104 
DT  N3    C4     sing N N 105 
DT  N3    H3     sing N N 106 
DT  C4    O4     doub N N 107 
DT  C4    C5     sing N N 108 
DT  C5    C7     sing N N 109 
DT  C5    C6     doub N N 110 
DT  C7    H71    sing N N 111 
DT  C7    H72    sing N N 112 
DT  C7    H73    sing N N 113 
DT  C6    H6     sing N N 114 
HOH O     H1     sing N N 115 
HOH O     H2     sing N N 116 
MMP C1    N1     sing N N 117 
MMP C1    H11    sing N N 118 
MMP C1    H12    sing N N 119 
MMP C1    H13    sing N N 120 
MMP N1    C11    sing Y N 121 
MMP N1    C14    sing Y N 122 
MMP C11   C12    doub Y N 123 
MMP C11   C45    sing Y N 124 
MMP C12   C13    sing Y N 125 
MMP C12   C16    sing N N 126 
MMP C13   C14    doub Y N 127 
MMP C13   C17    sing N N 128 
MMP C14   C15    sing Y N 129 
MMP C15   C21    doub Y Z 130 
MMP C15   H15    sing N N 131 
MMP C16   H161   sing N N 132 
MMP C16   H162   sing N N 133 
MMP C16   H163   sing N N 134 
MMP C17   C18    sing N N 135 
MMP C17   H171   sing N N 136 
MMP C17   H172   sing N N 137 
MMP C18   H181   sing N N 138 
MMP C18   H182   sing N N 139 
MMP C18   H183   sing N N 140 
MMP N2    C21    sing Y N 141 
MMP N2    C24    doub Y N 142 
MMP C21   C22    sing N N 143 
MMP C22   C23    doub N N 144 
MMP C22   C26    sing N N 145 
MMP C23   C24    sing N N 146 
MMP C23   C27    sing N N 147 
MMP C24   C25    sing Y N 148 
MMP C25   C31    doub Y Z 149 
MMP C25   H25    sing N N 150 
MMP C26   H261   sing N N 151 
MMP C26   H262   sing N N 152 
MMP C26   H263   sing N N 153 
MMP C27   C28    sing N N 154 
MMP C27   H271   sing N N 155 
MMP C27   H272   sing N N 156 
MMP C28   H281   sing N N 157 
MMP C28   H282   sing N N 158 
MMP C28   H283   sing N N 159 
MMP N3    C31    sing Y N 160 
MMP N3    C34    sing Y N 161 
MMP N3    HN3    sing N N 162 
MMP C31   C32    sing Y N 163 
MMP C32   C33    doub Y N 164 
MMP C32   C36    sing N N 165 
MMP C33   C34    sing Y N 166 
MMP C33   C37    sing N N 167 
MMP C34   C35    doub Y Z 168 
MMP C35   C41    sing Y N 169 
MMP C35   H35    sing N N 170 
MMP C36   H361   sing N N 171 
MMP C36   H362   sing N N 172 
MMP C36   H363   sing N N 173 
MMP C37   C38    sing N N 174 
MMP C37   H371   sing N N 175 
MMP C37   H372   sing N N 176 
MMP C38   C39    sing N N 177 
MMP C38   H381   sing N N 178 
MMP C38   H382   sing N N 179 
MMP C39   O31    sing N N 180 
MMP C39   O32    doub N N 181 
MMP O31   HO31   sing N N 182 
MMP N4    C41    doub Y N 183 
MMP N4    C44    sing Y N 184 
MMP C41   C42    sing N N 185 
MMP C42   C43    doub N N 186 
MMP C42   C47    sing N N 187 
MMP C43   C44    sing N N 188 
MMP C43   C46    sing N N 189 
MMP C44   C45    doub Y Z 190 
MMP C45   H45    sing N N 191 
MMP C46   H461   sing N N 192 
MMP C46   H462   sing N N 193 
MMP C46   H463   sing N N 194 
MMP C47   C48    sing N N 195 
MMP C47   H471   sing N N 196 
MMP C47   H472   sing N N 197 
MMP C48   C49    sing N N 198 
MMP C48   H481   sing N N 199 
MMP C48   H482   sing N N 200 
MMP C49   O41    sing N N 201 
MMP C49   O42    doub N N 202 
MMP O41   HO41   sing N N 203 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
4FXM 'double helix'    
4FXM 'quadruple helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG 2 1_555 A DG 20 1_555 -1.546 -3.532 -0.003 -2.465 2.297  89.510  1 A_DG2:DG20_A A 2 ? A 20 ? 6 3 
1 A DG 3 1_555 A DG 21 1_555 -1.513 -3.580 0.074  -5.460 8.719  89.723  2 A_DG3:DG21_A A 3 ? A 21 ? 6 3 
1 A DG 9 1_555 A DG 15 1_555 1.509  3.614  -0.108 9.604  -9.007 -89.159 3 A_DG9:DG15_A A 9 ? A 15 ? 6 3 
1 A DG 8 1_555 A DG 14 1_555 1.547  3.452  0.011  3.178  -2.434 -88.699 4 A_DG8:DG14_A A 8 ? A 14 ? 6 3 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG 2 1_555 A DG 20 1_555 A DG 3 1_555 A DG 21 1_555 -0.542 -0.764 3.210  1.414  3.520  28.694  -2.279 1.387 3.067  7.063 
-2.837 28.939  1 AA_DG2DG3:DG21DG20_AA A 2 ? A 20 ? A 3 ? A 21 ? 
1 A DG 3 1_555 A DG 21 1_555 A DG 9 1_555 A DG 15 1_555 -1.471 -3.570 0.004  -6.075 6.151  179.460 -1.785 0.736 0.004  3.076 3.037 
179.461 2 AA_DG3DG9:DG15DG21_AA A 3 ? A 21 ? A 9 ? A 15 ? 
1 A DG 9 1_555 A DG 15 1_555 A DG 8 1_555 A DG 14 1_555 0.461  0.785  -3.190 -1.083 -3.502 -28.009 -2.389 1.186 -3.051 7.197 
-2.225 -28.243 3 AA_DG9DG8:DG14DG15_AA A 9 ? A 15 ? A 8 ? A 14 ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'POTASSIUM ION'       K   
3 N-METHYLMESOPORPHYRIN MMP 
4 water                 HOH 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   3T5E 
_pdbx_initial_refinement_model.details          'PDB ENTRY 3T5E' 
#