HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-JUL-12 4G2A TITLE CRYSTAL STRUCTURE OF A PUTATIVE NUTRIENT BINDING PROTEIN (LPG2210) TITLE 2 FROM LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA STR. PHILADELPHIA 1 AT TITLE 3 2.33 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 272624; SOURCE 4 STRAIN: PHILADELPHIA 1; SOURCE 5 GENE: LPG2210; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS TWO DOMAINS PROTEIN, YARHG DOMAIN (PFAM13308), DUF4424 (PF14415), KEYWDS 2 STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4G2A 1 REMARK SEQADV LINK REVDAT 4 24-JAN-18 4G2A 1 JRNL REVDAT 3 15-NOV-17 4G2A 1 REMARK REVDAT 2 24-DEC-14 4G2A 1 TITLE REVDAT 1 29-AUG-12 4G2A 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (LPG2210) FROM JRNL TITL 2 LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA STR. PHILADELPHIA JRNL TITL 3 1 AT 2.33 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 14523 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 735 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 7 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.52 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.75 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2955 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2043 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2800 REMARK 3 BIN R VALUE (WORKING SET) : 0.2007 REMARK 3 BIN FREE R VALUE : 0.2694 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.25 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 155 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2596 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.35780 REMARK 3 B22 (A**2) : 4.14400 REMARK 3 B33 (A**2) : 4.21390 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.275 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2756 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3766 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1233 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 77 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 389 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2756 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 344 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3085 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.51 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|29 - 261} REMARK 3 ORIGIN FOR THE GROUP (A): 24.2527 27.3625 13.4431 REMARK 3 T TENSOR REMARK 3 T11: -0.0507 T22: -0.0430 REMARK 3 T33: -0.0900 T12: -0.0129 REMARK 3 T13: 0.0150 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.4473 L22: 1.6756 REMARK 3 L33: 2.0767 L12: -0.1568 REMARK 3 L13: 0.2723 L23: -0.1563 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: -0.0055 S13: -0.0694 REMARK 3 S21: 0.3130 S22: 0.0967 S23: 0.0423 REMARK 3 S31: -0.0556 S32: -0.0509 S33: -0.0612 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|262 - 349} REMARK 3 ORIGIN FOR THE GROUP (A): 24.2380 51.8434 -12.9560 REMARK 3 T TENSOR REMARK 3 T11: -0.0119 T22: -0.0846 REMARK 3 T33: -0.1543 T12: 0.0584 REMARK 3 T13: 0.0704 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 1.2948 L22: 3.6412 REMARK 3 L33: 6.6278 L12: 0.5123 REMARK 3 L13: -0.7219 L23: -0.8993 REMARK 3 S TENSOR REMARK 3 S11: 0.0472 S12: 0.0495 S13: 0.0470 REMARK 3 S21: 0.3804 S22: 0.1542 S23: 0.1483 REMARK 3 S31: -0.2728 S32: -0.2095 S33: -0.2014 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. SO4 IONS MODELED ARE PRESENT IN CRYSTALLIZATION REMARK 3 CONDITIONS. REMARK 4 REMARK 4 4G2A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073647. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794,0.9795,0.9184 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : RHODIUM-COATED VERTICAL AND REMARK 200 HORIZONTAL FOCUSING MIRRORS; REMARK 200 LIQUID-NITROGEN COOLED DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE MARCH 15, 2012 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14552 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 43.362 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.440 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.67900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.850 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M AMMONIUM SULFATE, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.97650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.88300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.85800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.88300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.97650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.85800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 44 -154.75 -110.88 REMARK 500 HIS A 47 56.71 -94.78 REMARK 500 LEU A 118 33.44 -96.71 REMARK 500 LEU A 161 19.98 55.78 REMARK 500 ASP A 196 172.21 78.24 REMARK 500 ARG A 238 -129.99 58.47 REMARK 500 VAL A 271 -56.75 -120.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 414 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-418811 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (29-349) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4G2A A 29 349 UNP Q5ZTF2 Q5ZTF2_LEGPH 29 349 SEQADV 4G2A GLY A 0 UNP Q5ZTF2 EXPRESSION TAG SEQRES 1 A 322 GLY ASN ASP THR ALA VAL GLY GLY GLU GLY SER LEU PRO SEQRES 2 A 322 ILE PRO VAL SER GLN PRO HIS ILE LYS MSE VAL SER GLU SEQRES 3 A 322 LEU ILE ARG ILE SER GLY LYS ASN LEU ASN GLU PRO GLN SEQRES 4 A 322 MSE ASN GLY SER TRP HIS TYR ASN CYS ASN PHE THR PHE SEQRES 5 A 322 LYS ASN THR LEU ASN LYS GLU VAL THR ILE SER MSE ALA SEQRES 6 A 322 PHE PRO PHE PRO ILE ASN ASP GLY ASN SER GLU ILE ALA SEQRES 7 A 322 LEU PRO ALA GLY GLN GLN THR ASN VAL GLY GLN ALA LEU SEQRES 8 A 322 VAL TYR ASP PHE LEU VAL THR VAL ASN ASP LYS GLN VAL SEQRES 9 A 322 SER ALA GLN ARG GLY ASN ILE ALA PRO ASP GLN ASN LYS SEQRES 10 A 322 GLY LEU TYR TYR GLU ASP ALA TYR PHE TRP LYS THR THR SEQRES 11 A 322 PHE PRO PRO LEU ALA THR VAL ASN ILE HIS HIS ASP TYR SEQRES 12 A 322 SER THR GLY ALA THR TYR ASP VAL MSE GLY TYR HIS TRP SEQRES 13 A 322 VAL ARG TYR VAL LEU LYS THR GLY ALA LEU TRP GLN ASP SEQRES 14 A 322 SER SER ILE GLY HIS THR ARG LEU GLU VAL ILE PRO ASN SEQRES 15 A 322 THR PRO THR ARG LEU CYS SER GLU ILE ASP GLN LYS ALA SEQRES 16 A 322 ASP TYR LEU ASN PRO THR PRO SER GLY MSE SER ILE SER SEQRES 17 A 322 GLY SER ARG ALA ASP ARG LYS TYR ILE TRP ASP LEU ARG SEQRES 18 A 322 HIS PHE GLN PRO GLN ALA ASP LEU SER LEU CYS LEU PHE SEQRES 19 A 322 THR GLY ILE SER TYR VAL ARG TYR LYS VAL ILE TYR PRO SEQRES 20 A 322 TRP LEU ASN SER ASP ASP ALA LEU SER LYS LEU ALA ARG SEQRES 21 A 322 LEU SER ASN LYS GLU LEU ARG PHE LEU ARG ASN THR ILE SEQRES 22 A 322 TYR ALA GLN TYR GLY ARG GLN PHE GLN SER PRO ASP LEU SEQRES 23 A 322 GLN GLU TYR PHE SER LYS LYS TRP TRP TYR VAL PRO ASN SEQRES 24 A 322 PRO ASP TYR SER ASP ARG MSE LEU ASN GLU GLU ASP LYS SEQRES 25 A 322 LYS LEU LEU SER MSE ILE ASN GLN ALA LYS MODRES 4G2A MSE A 50 MET SELENOMETHIONINE MODRES 4G2A MSE A 67 MET SELENOMETHIONINE MODRES 4G2A MSE A 91 MET SELENOMETHIONINE MODRES 4G2A MSE A 179 MET SELENOMETHIONINE MODRES 4G2A MSE A 232 MET SELENOMETHIONINE MODRES 4G2A MSE A 333 MET SELENOMETHIONINE MODRES 4G2A MSE A 344 MET SELENOMETHIONINE HET MSE A 50 8 HET MSE A 67 8 HET MSE A 91 8 HET MSE A 179 13 HET MSE A 232 8 HET MSE A 333 8 HET MSE A 344 8 HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET SO4 A 407 5 HET SO4 A 408 5 HET SO4 A 409 5 HET SO4 A 410 5 HET SO4 A 411 5 HET SO4 A 412 5 HET SO4 A 413 5 HET SO4 A 414 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 SO4 14(O4 S 2-) FORMUL 16 HOH *160(H2 O) HELIX 1 1 ASP A 141 GLY A 145 5 5 HELIX 2 2 LEU A 188 TRP A 194 5 7 HELIX 3 3 SER A 216 ILE A 218 5 3 HELIX 4 4 SER A 237 ARG A 241 5 5 HELIX 5 5 GLY A 263 VAL A 271 1 9 HELIX 6 6 VAL A 271 SER A 278 1 8 HELIX 7 7 ASP A 280 ARG A 287 1 8 HELIX 8 8 SER A 289 GLN A 303 1 15 HELIX 9 9 SER A 310 LYS A 319 1 10 HELIX 10 10 SER A 330 LEU A 334 5 5 HELIX 11 11 ASN A 335 LYS A 349 1 15 SHEET 1 A 5 GLY A 37 SER A 38 0 SHEET 2 A 5 HIS A 182 VAL A 187 1 O VAL A 187 N GLY A 37 SHEET 3 A 5 THR A 175 ASP A 177 -1 N THR A 175 O TRP A 183 SHEET 4 A 5 THR A 31 VAL A 33 -1 N ALA A 32 O TYR A 176 SHEET 5 A 5 GLU A 103 ILE A 104 1 O GLU A 103 N VAL A 33 SHEET 1 B 4 GLY A 37 SER A 38 0 SHEET 2 B 4 HIS A 182 VAL A 187 1 O VAL A 187 N GLY A 37 SHEET 3 B 4 LEU A 256 THR A 262 -1 O LEU A 256 N TYR A 186 SHEET 4 B 4 THR A 212 LEU A 214 -1 N ARG A 213 O PHE A 261 SHEET 1 C 4 ILE A 41 PRO A 42 0 SHEET 2 C 4 VAL A 87 PHE A 95 -1 O ALA A 92 N ILE A 41 SHEET 3 C 4 ASP A 150 PHE A 158 -1 O PHE A 158 N VAL A 87 SHEET 4 C 4 GLN A 134 ASN A 137 -1 N GLN A 134 O PHE A 153 SHEET 1 D 8 LYS A 129 VAL A 131 0 SHEET 2 D 8 TYR A 120 VAL A 126 -1 N VAL A 126 O LYS A 129 SHEET 3 D 8 THR A 163 GLY A 173 -1 O SER A 171 N TYR A 120 SHEET 4 D 8 SER A 70 ASN A 81 -1 N CYS A 75 O HIS A 168 SHEET 5 D 8 ILE A 48 LYS A 60 -1 N LYS A 49 O LYS A 80 SHEET 6 D 8 HIS A 201 ILE A 207 1 O ILE A 207 N GLY A 59 SHEET 7 D 8 LYS A 242 LEU A 247 -1 O LEU A 247 N THR A 202 SHEET 8 D 8 SER A 233 SER A 235 -1 N SER A 235 O LYS A 242 SSBOND 1 CYS A 215 CYS A 259 1555 1555 2.90 LINK C LYS A 49 N MSE A 50 1555 1555 1.34 LINK C MSE A 50 N VAL A 51 1555 1555 1.34 LINK C GLN A 66 N MSE A 67 1555 1555 1.35 LINK C MSE A 67 N ASN A 68 1555 1555 1.34 LINK C SER A 90 N MSE A 91 1555 1555 1.33 LINK C MSE A 91 N ALA A 92 1555 1555 1.34 LINK C VAL A 178 N MSE A 179 1555 1555 1.35 LINK C MSE A 179 N GLY A 180 1555 1555 1.33 LINK C GLY A 231 N MSE A 232 1555 1555 1.32 LINK C MSE A 232 N SER A 233 1555 1555 1.33 LINK C ARG A 332 N MSE A 333 1555 1555 1.35 LINK C MSE A 333 N LEU A 334 1555 1555 1.35 LINK C SER A 343 N MSE A 344 1555 1555 1.34 LINK C MSE A 344 N ILE A 345 1555 1555 1.35 CISPEP 1 THR A 228 PRO A 229 0 -1.02 SITE 1 AC1 4 SER A 44 ILE A 89 SER A 90 HOH A 650 SITE 1 AC2 9 ALA A 162 THR A 163 ARG A 306 PHE A 308 SITE 2 AC2 9 GLN A 309 SER A 310 LEU A 313 HOH A 600 SITE 3 AC2 9 HOH A 652 SITE 1 AC3 5 ARG A 56 SER A 58 ASN A 209 HOH A 604 SITE 2 AC3 5 HOH A 656 SITE 1 AC4 4 ARG A 56 GLU A 205 LYS A 242 HOH A 583 SITE 1 AC5 4 HIS A 47 LYS A 85 SER A 235 GLY A 236 SITE 1 AC6 2 ARG A 213 HOH A 605 SITE 1 AC7 6 ARG A 213 SER A 237 ARG A 238 ARG A 241 SITE 2 AC7 6 HOH A 582 HOH A 659 SITE 1 AC8 4 HIS A 201 ASP A 246 ARG A 248 LYS A 339 SITE 1 AC9 3 ASP A 141 ASN A 143 LYS A 144 SITE 1 BC1 6 ASN A 29 ASP A 30 THR A 31 SER A 102 SITE 2 BC1 6 HOH A 505 HOH A 517 SITE 1 BC2 7 ASN A 68 ALA A 108 GLY A 109 LYS A 221 SITE 2 BC2 7 ALA A 222 ASP A 223 HOH A 553 SITE 1 BC3 3 PRO A 65 ARG A 268 ASN A 335 SITE 1 BC4 3 LYS A 284 ARG A 287 ARG A 332 SITE 1 BC5 5 SER A 230 GLY A 231 HOH A 516 HOH A 612 SITE 2 BC5 5 HOH A 617 CRYST1 37.953 87.716 99.766 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026348 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011400 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010023 0.00000