HEADER ISOMERASE 15-JUL-12 4G3N
TITLE MYCOBACTERIUM TUBERCULOSIS GYRASE TYPE IIA TOPOISOMERASE C-TERMINAL
TITLE 2 DOMAIN AT 1.4 A RESOLUTION
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA GYRASE SUBUNIT A;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: UNP RESIDUES 512-838;
COMPND 5 EC: 5.99.1.3;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS;
SOURCE 3 ORGANISM_TAXID: 83332;
SOURCE 4 STRAIN: H37RV;
SOURCE 5 GENE: GYRA, MT0006, MTCT10H4.04, MTCY10H4.04, RV0006, RV006;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 ROSETTA 2;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM11
KEYWDS DNA GYRASE C-TERMINAL DOMAIN, BETA-PROPELLER, TOPOISOMERASE TYPE IIA,
KEYWDS 2 ISOMERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.DARMON,J.PITON,S.PETRELLA,A.AUBRY,C.MAYER
REVDAT 3 13-SEP-23 4G3N 1 SEQADV
REVDAT 2 23-OCT-13 4G3N 1 JRNL
REVDAT 1 07-AUG-13 4G3N 0
JRNL AUTH A.BOUIGE,A.DARMON,J.PITON,M.ROUE,S.PETRELLA,E.CAPTON,
JRNL AUTH 2 P.FORTERRE,A.AUBRY,C.MAYER
JRNL TITL MYCOBACTERIUM TUBERCULOSIS DNA GYRASE POSSESSES TWO
JRNL TITL 2 FUNCTIONAL GYRA-BOXES.
JRNL REF BIOCHEM.J. V. 455 285 2013
JRNL REFN ISSN 0264-6021
JRNL PMID 23869946
JRNL DOI 10.1042/BJ20130430
REMARK 2
REMARK 2 RESOLUTION. 1.40 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.2
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6
REMARK 3 NUMBER OF REFLECTIONS : 53241
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.187
REMARK 3 R VALUE (WORKING SET) : 0.185
REMARK 3 FREE R VALUE : 0.213
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070
REMARK 3 FREE R VALUE TEST SET COUNT : 2701
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.44
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.58
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3231
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2370
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3055
REMARK 3 BIN R VALUE (WORKING SET) : 0.2366
REMARK 3 BIN FREE R VALUE : 0.2442
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.45
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 176
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2311
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 0
REMARK 3 SOLVENT ATOMS : 296
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 21.09
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.98
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.88010
REMARK 3 B22 (A**2) : 1.11110
REMARK 3 B33 (A**2) : -0.23100
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.194
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.065
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 2365 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 3196 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 860 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 58 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 359 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 2365 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 311 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 3009 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.09
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.22
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.93
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 5
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|512 - A|606 }
REMARK 3 ORIGIN FOR THE GROUP (A): 26.0960 45.3748 19.3313
REMARK 3 T TENSOR
REMARK 3 T11: -0.0452 T22: -0.0093
REMARK 3 T33: -0.0079 T12: -0.0036
REMARK 3 T13: 0.0023 T23: -0.0369
REMARK 3 L TENSOR
REMARK 3 L11: 1.1447 L22: 0.8563
REMARK 3 L33: 0.9240 L12: -0.1430
REMARK 3 L13: -0.2288 L23: 0.2921
REMARK 3 S TENSOR
REMARK 3 S11: -0.0325 S12: -0.1115 S13: 0.0862
REMARK 3 S21: 0.0679 S22: 0.0061 S23: -0.0112
REMARK 3 S31: 0.0730 S32: 0.1015 S33: 0.0264
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { A|607 - A|644 }
REMARK 3 ORIGIN FOR THE GROUP (A): 20.2229 44.5907 2.2140
REMARK 3 T TENSOR
REMARK 3 T11: -0.0354 T22: 0.0338
REMARK 3 T33: 0.0065 T12: 0.0041
REMARK 3 T13: -0.0088 T23: -0.0009
REMARK 3 L TENSOR
REMARK 3 L11: 0.8514 L22: 0.8952
REMARK 3 L33: 0.8548 L12: 0.1702
REMARK 3 L13: 0.0706 L23: -0.2433
REMARK 3 S TENSOR
REMARK 3 S11: -0.0453 S12: 0.0947 S13: 0.1924
REMARK 3 S21: -0.0360 S22: -0.0026 S23: -0.0694
REMARK 3 S31: 0.0391 S32: 0.1533 S33: 0.0479
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: { A|645 - A|718 }
REMARK 3 ORIGIN FOR THE GROUP (A): 10.4981 38.1695 1.0140
REMARK 3 T TENSOR
REMARK 3 T11: -0.0523 T22: -0.0533
REMARK 3 T33: -0.0636 T12: -0.0031
REMARK 3 T13: -0.0154 T23: -0.0056
REMARK 3 L TENSOR
REMARK 3 L11: 1.0703 L22: 1.2545
REMARK 3 L33: 1.6742 L12: 0.3547
REMARK 3 L13: -0.4959 L23: -0.6866
REMARK 3 S TENSOR
REMARK 3 S11: -0.0903 S12: 0.0664 S13: 0.0855
REMARK 3 S21: -0.1411 S22: 0.0877 S23: 0.0833
REMARK 3 S31: 0.1944 S32: -0.0137 S33: 0.0026
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: { A|719 - A|816 }
REMARK 3 ORIGIN FOR THE GROUP (A): 9.3533 24.0465 15.7876
REMARK 3 T TENSOR
REMARK 3 T11: -0.0313 T22: -0.0459
REMARK 3 T33: -0.0380 T12: 0.0098
REMARK 3 T13: 0.0205 T23: -0.0003
REMARK 3 L TENSOR
REMARK 3 L11: 1.1115 L22: 1.9291
REMARK 3 L33: 1.8544 L12: -0.0455
REMARK 3 L13: 0.5622 L23: -1.5788
REMARK 3 S TENSOR
REMARK 3 S11: -0.0318 S12: -0.1331 S13: -0.0605
REMARK 3 S21: -0.1426 S22: 0.0798 S23: 0.0623
REMARK 3 S31: 0.2148 S32: -0.1885 S33: -0.0480
REMARK 3
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: { A|817 - A|820 }
REMARK 3 ORIGIN FOR THE GROUP (A): 23.4482 32.1925 19.1805
REMARK 3 T TENSOR
REMARK 3 T11: 0.0688 T22: -0.0451
REMARK 3 T33: 0.0799 T12: -0.0311
REMARK 3 T13: 0.0379 T23: -0.0228
REMARK 3 L TENSOR
REMARK 3 L11: 0.3302 L22: 0.0000
REMARK 3 L33: 1.1188 L12: 0.2278
REMARK 3 L13: -0.6727 L23: -1.2223
REMARK 3 S TENSOR
REMARK 3 S11: -0.0001 S12: 0.0413 S13: 0.0177
REMARK 3 S21: -0.0280 S22: 0.0509 S23: -0.1219
REMARK 3 S31: -0.0060 S32: -0.0846 S33: -0.0508
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4G3N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-12.
REMARK 100 THE DEPOSITION ID IS D_1000073696.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 15-OCT-11
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SOLEIL
REMARK 200 BEAMLINE : PROXIMA 1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762
REMARK 200 MONOCHROMATOR : MIRRORS
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53387
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400
REMARK 200 RESOLUTION RANGE LOW (A) : 44.090
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: AMORE
REMARK 200 STARTING MODEL: 1ZI0
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 36.73
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES 100 MM PH 7.5, NACL 200 MM, PEG
REMARK 280 3350 20-30%, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.35000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.09100
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.25950
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.09100
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.35000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.25950
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 ARG A 539
REMARK 465 GLY A 540
REMARK 465 GLY A 541
REMARK 465 LYS A 542
REMARK 465 GLY A 543
REMARK 465 VAL A 544
REMARK 465 GLN A 545
REMARK 465 GLU A 821
REMARK 465 SER A 822
REMARK 465 GLY A 823
REMARK 465 ASP A 824
REMARK 465 ASP A 825
REMARK 465 ASN A 826
REMARK 465 ALA A 827
REMARK 465 VAL A 828
REMARK 465 ASP A 829
REMARK 465 ALA A 830
REMARK 465 ASN A 831
REMARK 465 GLY A 832
REMARK 465 ALA A 833
REMARK 465 ASP A 834
REMARK 465 GLN A 835
REMARK 465 THR A 836
REMARK 465 GLY A 837
REMARK 465 ASN A 838
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O LYS A 799 O HOH A 936 2.18
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 MET A 703 SD MET A 703 CE -0.338
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 645 -141.18 44.95
REMARK 500 GLN A 797 44.04 -99.39
REMARK 500
REMARK 500 REMARK: NULL
DBREF 4G3N A 512 838 UNP Q07702 GYRA_MYCTU 512 838
SEQADV 4G3N LEU A 712 UNP Q07702 VAL 712 VARIANT
SEQRES 1 A 327 ALA ARG GLU ASP VAL VAL VAL THR ILE THR GLU THR GLY
SEQRES 2 A 327 TYR ALA LYS ARG THR LYS THR ASP LEU TYR ARG SER GLN
SEQRES 3 A 327 LYS ARG GLY GLY LYS GLY VAL GLN GLY ALA GLY LEU LYS
SEQRES 4 A 327 GLN ASP ASP ILE VAL ALA HIS PHE PHE VAL CYS SER THR
SEQRES 5 A 327 HIS ASP LEU ILE LEU PHE PHE THR THR GLN GLY ARG VAL
SEQRES 6 A 327 TYR ARG ALA LYS ALA TYR ASP LEU PRO GLU ALA SER ARG
SEQRES 7 A 327 THR ALA ARG GLY GLN HIS VAL ALA ASN LEU LEU ALA PHE
SEQRES 8 A 327 GLN PRO GLU GLU ARG ILE ALA GLN VAL ILE GLN ILE ARG
SEQRES 9 A 327 GLY TYR THR ASP ALA PRO TYR LEU VAL LEU ALA THR ARG
SEQRES 10 A 327 ASN GLY LEU VAL LYS LYS SER LYS LEU THR ASP PHE ASP
SEQRES 11 A 327 SER ASN ARG SER GLY GLY ILE VAL ALA VAL ASN LEU ARG
SEQRES 12 A 327 ASP ASN ASP GLU LEU VAL GLY ALA VAL LEU CYS SER ALA
SEQRES 13 A 327 GLY ASP ASP LEU LEU LEU VAL SER ALA ASN GLY GLN SER
SEQRES 14 A 327 ILE ARG PHE SER ALA THR ASP GLU ALA LEU ARG PRO MET
SEQRES 15 A 327 GLY ARG ALA THR SER GLY VAL GLN GLY MET ARG PHE ASN
SEQRES 16 A 327 ILE ASP ASP ARG LEU LEU SER LEU ASN VAL VAL ARG GLU
SEQRES 17 A 327 GLY THR TYR LEU LEU VAL ALA THR SER GLY GLY TYR ALA
SEQRES 18 A 327 LYS ARG THR ALA ILE GLU GLU TYR PRO VAL GLN GLY ARG
SEQRES 19 A 327 GLY GLY LYS GLY VAL LEU THR VAL MET TYR ASP ARG ARG
SEQRES 20 A 327 ARG GLY ARG LEU VAL GLY ALA LEU ILE VAL ASP ASP ASP
SEQRES 21 A 327 SER GLU LEU TYR ALA VAL THR SER GLY GLY GLY VAL ILE
SEQRES 22 A 327 ARG THR ALA ALA ARG GLN VAL ARG LYS ALA GLY ARG GLN
SEQRES 23 A 327 THR LYS GLY VAL ARG LEU MET ASN LEU GLY GLU GLY ASP
SEQRES 24 A 327 THR LEU LEU ALA ILE ALA ARG ASN ALA GLU GLU SER GLY
SEQRES 25 A 327 ASP ASP ASN ALA VAL ASP ALA ASN GLY ALA ASP GLN THR
SEQRES 26 A 327 GLY ASN
FORMUL 2 HOH *296(H2 O)
HELIX 1 1 THR A 531 ARG A 535 1 5
HELIX 2 2 LYS A 550 ASP A 553 5 4
HELIX 3 3 TYR A 582 LEU A 584 5 3
HELIX 4 4 VAL A 596 LEU A 600 1 5
HELIX 5 5 THR A 638 ASP A 641 5 4
HELIX 6 6 GLU A 738 TYR A 740 5 3
HELIX 7 7 ARG A 789 VAL A 791 5 3
SHEET 1 A 4 VAL A 555 SER A 562 0
SHEET 2 A 4 ASP A 515 THR A 521 -1 N VAL A 518 O PHE A 559
SHEET 3 A 4 TYR A 525 LYS A 530 -1 O THR A 529 N VAL A 517
SHEET 4 A 4 GLN A 594 HIS A 595 -1 O GLN A 594 N ALA A 526
SHEET 1 B 4 ILE A 608 ILE A 614 0
SHEET 2 B 4 LEU A 566 THR A 571 -1 N PHE A 570 O ALA A 609
SHEET 3 B 4 ARG A 575 LYS A 580 -1 O ALA A 579 N ILE A 567
SHEET 4 B 4 GLY A 647 VAL A 649 -1 O ILE A 648 N VAL A 576
SHEET 1 C 4 LEU A 659 CYS A 665 0
SHEET 2 C 4 TYR A 622 THR A 627 -1 N VAL A 624 O VAL A 663
SHEET 3 C 4 LEU A 631 LYS A 636 -1 O SER A 635 N LEU A 623
SHEET 4 C 4 VAL A 700 GLN A 701 -1 O VAL A 700 N VAL A 632
SHEET 1 D 4 LEU A 711 VAL A 716 0
SHEET 2 D 4 ASP A 670 SER A 675 -1 N VAL A 674 O LEU A 712
SHEET 3 D 4 GLN A 679 SER A 684 -1 O GLN A 679 N SER A 675
SHEET 4 D 4 VAL A 750 LEU A 751 -1 O VAL A 750 N SER A 680
SHEET 1 E 4 LEU A 762 VAL A 768 0
SHEET 2 E 4 TYR A 722 THR A 727 -1 N LEU A 724 O LEU A 766
SHEET 3 E 4 TYR A 731 ALA A 736 -1 O THR A 735 N LEU A 723
SHEET 4 E 4 VAL A 801 ARG A 802 -1 O VAL A 801 N ALA A 732
SHEET 1 F 3 VAL A 783 ALA A 787 0
SHEET 2 F 3 GLU A 773 THR A 778 -1 N LEU A 774 O THR A 786
SHEET 3 F 3 LEU A 812 ASN A 818 -1 O LEU A 813 N VAL A 777
CRYST1 38.700 80.519 88.182 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.025840 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012419 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011340 0.00000