HEADER LIGASE 21-JUL-12 4G84 TITLE CRYSTAL STRUCTURE OF HUMAN HISRS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTIDINE--TRNA LIGASE, CYTOPLASMIC; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 54-506; COMPND 5 SYNONYM: HISTIDYL-TRNA SYNTHETASE, HISRS; COMPND 6 EC: 6.1.1.21; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HARS, HRS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET32M KEYWDS SYNTHETASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.WEI,J.WU,J.J.ZHOU,X.-L.YANG,M.ZHANG,P.SCHIMMEL REVDAT 2 13-SEP-23 4G84 1 REMARK SEQADV REVDAT 1 26-SEP-12 4G84 0 JRNL AUTH Z.XU,Z.WEI,J.J.ZHOU,F.YE,W.S.LO,F.WANG,C.F.LAU,J.WU, JRNL AUTH 2 L.A.NANGLE,K.P.CHIANG,X.L.YANG,M.ZHANG,P.SCHIMMEL JRNL TITL INTERNALLY DELETED HUMAN TRNA SYNTHETASE SUGGESTS JRNL TITL 2 EVOLUTIONARY PRESSURE FOR REPURPOSING. JRNL REF STRUCTURE V. 20 1470 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22958643 JRNL DOI 10.1016/J.STR.2012.08.001 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 42096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2124 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 37.32 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.34550 REMARK 3 B22 (A**2) : 5.34550 REMARK 3 B33 (A**2) : -10.69090 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 55:209 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8936 36.3546 11.8789 REMARK 3 T TENSOR REMARK 3 T11: 0.1832 T22: 0.1457 REMARK 3 T33: 0.1216 T12: 0.0472 REMARK 3 T13: 0.0366 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.5388 L22: 0.7416 REMARK 3 L33: 2.0536 L12: 0.2210 REMARK 3 L13: 0.6689 L23: 1.0937 REMARK 3 S TENSOR REMARK 3 S11: -0.0240 S12: -0.0889 S13: 0.0108 REMARK 3 S21: 0.0421 S22: -0.1050 S23: -0.0350 REMARK 3 S31: -0.1622 S32: -0.2898 S33: 0.0956 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 210:326 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.9392 58.2146 23.8484 REMARK 3 T TENSOR REMARK 3 T11: 0.3484 T22: 0.1807 REMARK 3 T33: 0.2734 T12: 0.1460 REMARK 3 T13: -0.1383 T23: -0.0874 REMARK 3 L TENSOR REMARK 3 L11: 1.2747 L22: 0.4447 REMARK 3 L33: 0.4194 L12: -0.7451 REMARK 3 L13: 0.0018 L23: 0.4929 REMARK 3 S TENSOR REMARK 3 S11: 0.1137 S12: 0.0316 S13: 0.1444 REMARK 3 S21: -0.1581 S22: -0.2365 S23: 0.1692 REMARK 3 S31: -0.4359 S32: -0.0316 S33: 0.1243 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 327:404 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.2822 45.4660 12.7382 REMARK 3 T TENSOR REMARK 3 T11: 0.3195 T22: 0.1612 REMARK 3 T33: 0.2058 T12: 0.0384 REMARK 3 T13: -0.0463 T23: -0.0279 REMARK 3 L TENSOR REMARK 3 L11: 0.4470 L22: 1.3017 REMARK 3 L33: 0.9304 L12: 0.2316 REMARK 3 L13: -0.3178 L23: 0.7925 REMARK 3 S TENSOR REMARK 3 S11: -0.1686 S12: 0.0643 S13: 0.0138 REMARK 3 S21: -0.2859 S22: -0.1438 S23: 0.1130 REMARK 3 S31: -0.0363 S32: -0.2750 S33: 0.2313 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 405:504 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1988 33.6399 -20.9169 REMARK 3 T TENSOR REMARK 3 T11: 0.2254 T22: 0.1737 REMARK 3 T33: 0.1671 T12: -0.0733 REMARK 3 T13: 0.0334 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.9376 L22: 1.3200 REMARK 3 L33: 0.6212 L12: 0.9104 REMARK 3 L13: -0.3428 L23: -0.7951 REMARK 3 S TENSOR REMARK 3 S11: -0.0120 S12: 0.0094 S13: -0.0891 REMARK 3 S21: 0.0208 S22: -0.0059 S23: -0.1039 REMARK 3 S31: -0.2014 S32: 0.0686 S33: 0.0099 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 43:172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9713 22.6662 4.2701 REMARK 3 T TENSOR REMARK 3 T11: 0.2640 T22: 0.0875 REMARK 3 T33: 0.1153 T12: -0.1054 REMARK 3 T13: 0.0153 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.3387 L22: 0.4594 REMARK 3 L33: 1.9190 L12: -0.5697 REMARK 3 L13: -0.5679 L23: 0.3464 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: 0.0481 S13: -0.0261 REMARK 3 S21: 0.0370 S22: -0.0816 S23: 0.0267 REMARK 3 S31: 0.2679 S32: -0.2359 S33: 0.1176 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 173:336 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3216 3.6453 -13.3401 REMARK 3 T TENSOR REMARK 3 T11: 0.3779 T22: 0.1066 REMARK 3 T33: 0.3329 T12: -0.0209 REMARK 3 T13: -0.1179 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.2479 L22: 0.1071 REMARK 3 L33: 1.3884 L12: 0.8216 REMARK 3 L13: 0.4704 L23: 0.7494 REMARK 3 S TENSOR REMARK 3 S11: 0.1965 S12: 0.0359 S13: -0.4198 REMARK 3 S21: 0.2819 S22: 0.0278 S23: -0.4089 REMARK 3 S31: 0.4388 S32: -0.0944 S33: -0.2246 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN B AND RESID 337:404 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9402 17.0704 -2.0386 REMARK 3 T TENSOR REMARK 3 T11: 0.4052 T22: 0.1819 REMARK 3 T33: 0.2609 T12: -0.0728 REMARK 3 T13: -0.0147 T23: 0.0496 REMARK 3 L TENSOR REMARK 3 L11: 1.9388 L22: 0.1557 REMARK 3 L33: 2.7002 L12: -0.2964 REMARK 3 L13: 1.2368 L23: 0.6258 REMARK 3 S TENSOR REMARK 3 S11: 0.1711 S12: -0.1385 S13: -0.4370 REMARK 3 S21: 0.1512 S22: 0.0578 S23: 0.0486 REMARK 3 S31: 0.7675 S32: -0.1423 S33: -0.2087 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 405:504 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4232 48.3029 26.1460 REMARK 3 T TENSOR REMARK 3 T11: 0.2456 T22: 0.1939 REMARK 3 T33: 0.1638 T12: 0.0332 REMARK 3 T13: -0.0174 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 1.2119 L22: 0.4941 REMARK 3 L33: 0.5203 L12: -0.3028 REMARK 3 L13: 0.7066 L23: -0.3802 REMARK 3 S TENSOR REMARK 3 S11: -0.0749 S12: 0.0109 S13: 0.1181 REMARK 3 S21: 0.0368 S22: 0.0122 S23: -0.0455 REMARK 3 S31: -0.0424 S32: 0.1972 S33: 0.0712 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G84 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000073857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45571 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.67900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4G85 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE 20% V/V PEGMME550, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 127.26650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 46.75950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.75950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.63325 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.75950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 46.75950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 190.89975 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.75950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.75950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 63.63325 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 46.75950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.75950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 190.89975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 127.26650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 43 REMARK 465 PRO A 44 REMARK 465 GLY A 45 REMARK 465 SER A 46 REMARK 465 GLU A 47 REMARK 465 PHE A 48 REMARK 465 GLU A 49 REMARK 465 LEU A 50 REMARK 465 ARG A 51 REMARK 465 ARG A 52 REMARK 465 GLN A 53 REMARK 465 PHE A 54 REMARK 465 GLU A 109 REMARK 465 ASP A 110 REMARK 465 SER A 111 REMARK 465 LYS A 112 REMARK 465 PRO A 161 REMARK 465 ALA A 162 REMARK 465 MET A 163 REMARK 465 THR A 164 REMARK 465 ARG A 165 REMARK 465 GLY A 166 REMARK 465 PRO A 344 REMARK 465 ALA A 345 REMARK 465 GLN A 346 REMARK 465 ALA A 347 REMARK 465 GLY A 348 REMARK 465 GLU A 349 REMARK 465 GLU A 350 REMARK 465 PRO A 505 REMARK 465 LEU A 506 REMARK 465 GLY B 105 REMARK 465 LYS B 106 REMARK 465 TYR B 107 REMARK 465 GLY B 108 REMARK 465 GLU B 109 REMARK 465 ASP B 110 REMARK 465 PRO B 161 REMARK 465 ALA B 162 REMARK 465 MET B 163 REMARK 465 THR B 164 REMARK 465 ARG B 165 REMARK 465 GLY B 166 REMARK 465 THR B 343 REMARK 465 PRO B 344 REMARK 465 ALA B 345 REMARK 465 GLN B 346 REMARK 465 ALA B 347 REMARK 465 GLY B 348 REMARK 465 GLU B 349 REMARK 465 GLU B 350 REMARK 465 PRO B 351 REMARK 465 LEU B 352 REMARK 465 GLY B 353 REMARK 465 VAL B 354 REMARK 465 PRO B 505 REMARK 465 LEU B 506 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 63 CG CD NE CZ NH1 NH2 REMARK 470 THR A 343 OG1 CG2 REMARK 470 GLU A 401 CG CD OE1 OE2 REMARK 470 GLN A 504 CG CD OE1 NE2 REMARK 470 LYS B 112 CG CD CE NZ REMARK 470 LYS B 257 CG CD CE NZ REMARK 470 GLU B 262 CG CD OE1 OE2 REMARK 470 GLN B 342 CG CD OE1 NE2 REMARK 470 LYS B 373 CG CD CE NZ REMARK 470 GLU B 402 CG CD OE1 OE2 REMARK 470 GLU B 496 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 57 143.04 -170.65 REMARK 500 ARG A 158 43.48 -78.20 REMARK 500 MET A 185 -9.01 70.51 REMARK 500 MET B 185 -0.58 71.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1003 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4G85 RELATED DB: PDB REMARK 900 FULL LENGTH PROTEIN DBREF 4G84 A 54 506 UNP P12081 SYHC_HUMAN 54 506 DBREF 4G84 B 54 506 UNP P12081 SYHC_HUMAN 54 506 SEQADV 4G84 GLY A 43 UNP P12081 EXPRESSION TAG SEQADV 4G84 PRO A 44 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLY A 45 UNP P12081 EXPRESSION TAG SEQADV 4G84 SER A 46 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLU A 47 UNP P12081 EXPRESSION TAG SEQADV 4G84 PHE A 48 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLU A 49 UNP P12081 EXPRESSION TAG SEQADV 4G84 LEU A 50 UNP P12081 EXPRESSION TAG SEQADV 4G84 ARG A 51 UNP P12081 EXPRESSION TAG SEQADV 4G84 ARG A 52 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLN A 53 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLY B 43 UNP P12081 EXPRESSION TAG SEQADV 4G84 PRO B 44 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLY B 45 UNP P12081 EXPRESSION TAG SEQADV 4G84 SER B 46 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLU B 47 UNP P12081 EXPRESSION TAG SEQADV 4G84 PHE B 48 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLU B 49 UNP P12081 EXPRESSION TAG SEQADV 4G84 LEU B 50 UNP P12081 EXPRESSION TAG SEQADV 4G84 ARG B 51 UNP P12081 EXPRESSION TAG SEQADV 4G84 ARG B 52 UNP P12081 EXPRESSION TAG SEQADV 4G84 GLN B 53 UNP P12081 EXPRESSION TAG SEQRES 1 A 464 GLY PRO GLY SER GLU PHE GLU LEU ARG ARG GLN PHE VAL SEQRES 2 A 464 LEU LYS THR PRO LYS GLY THR ARG ASP TYR SER PRO ARG SEQRES 3 A 464 GLN MET ALA VAL ARG GLU LYS VAL PHE ASP VAL ILE ILE SEQRES 4 A 464 ARG CYS PHE LYS ARG HIS GLY ALA GLU VAL ILE ASP THR SEQRES 5 A 464 PRO VAL PHE GLU LEU LYS GLU THR LEU MET GLY LYS TYR SEQRES 6 A 464 GLY GLU ASP SER LYS LEU ILE TYR ASP LEU LYS ASP GLN SEQRES 7 A 464 GLY GLY GLU LEU LEU SER LEU ARG TYR ASP LEU THR VAL SEQRES 8 A 464 PRO PHE ALA ARG TYR LEU ALA MET ASN LYS LEU THR ASN SEQRES 9 A 464 ILE LYS ARG TYR HIS ILE ALA LYS VAL TYR ARG ARG ASP SEQRES 10 A 464 ASN PRO ALA MET THR ARG GLY ARG TYR ARG GLU PHE TYR SEQRES 11 A 464 GLN CYS ASP PHE ASP ILE ALA GLY ASN PHE ASP PRO MET SEQRES 12 A 464 ILE PRO ASP ALA GLU CYS LEU LYS ILE MET CYS GLU ILE SEQRES 13 A 464 LEU SER SER LEU GLN ILE GLY ASP PHE LEU VAL LYS VAL SEQRES 14 A 464 ASN ASP ARG ARG ILE LEU ASP GLY MET PHE ALA ILE CYS SEQRES 15 A 464 GLY VAL SER ASP SER LYS PHE ARG THR ILE CYS SER SER SEQRES 16 A 464 VAL ASP LYS LEU ASP LYS VAL SER TRP GLU GLU VAL LYS SEQRES 17 A 464 ASN GLU MET VAL GLY GLU LYS GLY LEU ALA PRO GLU VAL SEQRES 18 A 464 ALA ASP ARG ILE GLY ASP TYR VAL GLN GLN HIS GLY GLY SEQRES 19 A 464 VAL SER LEU VAL GLU GLN LEU LEU GLN ASP PRO LYS LEU SEQRES 20 A 464 SER GLN ASN LYS GLN ALA LEU GLU GLY LEU GLY ASP LEU SEQRES 21 A 464 LYS LEU LEU PHE GLU TYR LEU THR LEU PHE GLY ILE ASP SEQRES 22 A 464 ASP LYS ILE SER PHE ASP LEU SER LEU ALA ARG GLY LEU SEQRES 23 A 464 ASP TYR TYR THR GLY VAL ILE TYR GLU ALA VAL LEU LEU SEQRES 24 A 464 GLN THR PRO ALA GLN ALA GLY GLU GLU PRO LEU GLY VAL SEQRES 25 A 464 GLY SER VAL ALA ALA GLY GLY ARG TYR ASP GLY LEU VAL SEQRES 26 A 464 GLY MET PHE ASP PRO LYS GLY ARG LYS VAL PRO CYS VAL SEQRES 27 A 464 GLY LEU SER ILE GLY VAL GLU ARG ILE PHE SER ILE VAL SEQRES 28 A 464 GLU GLN ARG LEU GLU ALA LEU GLU GLU LYS ILE ARG THR SEQRES 29 A 464 THR GLU THR GLN VAL LEU VAL ALA SER ALA GLN LYS LYS SEQRES 30 A 464 LEU LEU GLU GLU ARG LEU LYS LEU VAL SER GLU LEU TRP SEQRES 31 A 464 ASP ALA GLY ILE LYS ALA GLU LEU LEU TYR LYS LYS ASN SEQRES 32 A 464 PRO LYS LEU LEU ASN GLN LEU GLN TYR CYS GLU GLU ALA SEQRES 33 A 464 GLY ILE PRO LEU VAL ALA ILE ILE GLY GLU GLN GLU LEU SEQRES 34 A 464 LYS ASP GLY VAL ILE LYS LEU ARG SER VAL THR SER ARG SEQRES 35 A 464 GLU GLU VAL ASP VAL ARG ARG GLU ASP LEU VAL GLU GLU SEQRES 36 A 464 ILE LYS ARG ARG THR GLY GLN PRO LEU SEQRES 1 B 464 GLY PRO GLY SER GLU PHE GLU LEU ARG ARG GLN PHE VAL SEQRES 2 B 464 LEU LYS THR PRO LYS GLY THR ARG ASP TYR SER PRO ARG SEQRES 3 B 464 GLN MET ALA VAL ARG GLU LYS VAL PHE ASP VAL ILE ILE SEQRES 4 B 464 ARG CYS PHE LYS ARG HIS GLY ALA GLU VAL ILE ASP THR SEQRES 5 B 464 PRO VAL PHE GLU LEU LYS GLU THR LEU MET GLY LYS TYR SEQRES 6 B 464 GLY GLU ASP SER LYS LEU ILE TYR ASP LEU LYS ASP GLN SEQRES 7 B 464 GLY GLY GLU LEU LEU SER LEU ARG TYR ASP LEU THR VAL SEQRES 8 B 464 PRO PHE ALA ARG TYR LEU ALA MET ASN LYS LEU THR ASN SEQRES 9 B 464 ILE LYS ARG TYR HIS ILE ALA LYS VAL TYR ARG ARG ASP SEQRES 10 B 464 ASN PRO ALA MET THR ARG GLY ARG TYR ARG GLU PHE TYR SEQRES 11 B 464 GLN CYS ASP PHE ASP ILE ALA GLY ASN PHE ASP PRO MET SEQRES 12 B 464 ILE PRO ASP ALA GLU CYS LEU LYS ILE MET CYS GLU ILE SEQRES 13 B 464 LEU SER SER LEU GLN ILE GLY ASP PHE LEU VAL LYS VAL SEQRES 14 B 464 ASN ASP ARG ARG ILE LEU ASP GLY MET PHE ALA ILE CYS SEQRES 15 B 464 GLY VAL SER ASP SER LYS PHE ARG THR ILE CYS SER SER SEQRES 16 B 464 VAL ASP LYS LEU ASP LYS VAL SER TRP GLU GLU VAL LYS SEQRES 17 B 464 ASN GLU MET VAL GLY GLU LYS GLY LEU ALA PRO GLU VAL SEQRES 18 B 464 ALA ASP ARG ILE GLY ASP TYR VAL GLN GLN HIS GLY GLY SEQRES 19 B 464 VAL SER LEU VAL GLU GLN LEU LEU GLN ASP PRO LYS LEU SEQRES 20 B 464 SER GLN ASN LYS GLN ALA LEU GLU GLY LEU GLY ASP LEU SEQRES 21 B 464 LYS LEU LEU PHE GLU TYR LEU THR LEU PHE GLY ILE ASP SEQRES 22 B 464 ASP LYS ILE SER PHE ASP LEU SER LEU ALA ARG GLY LEU SEQRES 23 B 464 ASP TYR TYR THR GLY VAL ILE TYR GLU ALA VAL LEU LEU SEQRES 24 B 464 GLN THR PRO ALA GLN ALA GLY GLU GLU PRO LEU GLY VAL SEQRES 25 B 464 GLY SER VAL ALA ALA GLY GLY ARG TYR ASP GLY LEU VAL SEQRES 26 B 464 GLY MET PHE ASP PRO LYS GLY ARG LYS VAL PRO CYS VAL SEQRES 27 B 464 GLY LEU SER ILE GLY VAL GLU ARG ILE PHE SER ILE VAL SEQRES 28 B 464 GLU GLN ARG LEU GLU ALA LEU GLU GLU LYS ILE ARG THR SEQRES 29 B 464 THR GLU THR GLN VAL LEU VAL ALA SER ALA GLN LYS LYS SEQRES 30 B 464 LEU LEU GLU GLU ARG LEU LYS LEU VAL SER GLU LEU TRP SEQRES 31 B 464 ASP ALA GLY ILE LYS ALA GLU LEU LEU TYR LYS LYS ASN SEQRES 32 B 464 PRO LYS LEU LEU ASN GLN LEU GLN TYR CYS GLU GLU ALA SEQRES 33 B 464 GLY ILE PRO LEU VAL ALA ILE ILE GLY GLU GLN GLU LEU SEQRES 34 B 464 LYS ASP GLY VAL ILE LYS LEU ARG SER VAL THR SER ARG SEQRES 35 B 464 GLU GLU VAL ASP VAL ARG ARG GLU ASP LEU VAL GLU GLU SEQRES 36 B 464 ILE LYS ARG ARG THR GLY GLN PRO LEU HET IMD A1001 5 HET IMD B1001 5 HET IMD B1002 5 HET CL B1003 1 HETNAM IMD IMIDAZOLE HETNAM CL CHLORIDE ION FORMUL 3 IMD 3(C3 H5 N2 1+) FORMUL 6 CL CL 1- FORMUL 7 HOH *166(H2 O) HELIX 1 1 SER A 66 HIS A 87 1 22 HELIX 2 2 LYS A 100 MET A 104 1 5 HELIX 3 3 LEU A 131 ASN A 142 1 12 HELIX 4 4 MET A 185 GLN A 203 1 19 HELIX 5 5 ARG A 214 GLY A 225 1 12 HELIX 6 6 SER A 227 ASP A 239 1 13 HELIX 7 7 LYS A 240 LYS A 243 5 4 HELIX 8 8 SER A 245 GLU A 256 1 12 HELIX 9 9 ALA A 260 GLN A 272 1 13 HELIX 10 10 GLY A 276 LEU A 284 1 9 HELIX 11 11 ASP A 286 GLN A 291 1 6 HELIX 12 12 ASN A 292 PHE A 312 1 21 HELIX 13 13 ILE A 314 ASP A 316 5 3 HELIX 14 14 LEU A 366 PHE A 370 5 5 HELIX 15 15 GLY A 385 ALA A 399 1 15 HELIX 16 16 LEU A 420 ALA A 434 1 15 HELIX 17 17 LYS A 447 GLY A 459 1 13 HELIX 18 18 GLY A 467 GLY A 474 1 8 HELIX 19 19 ASP A 493 GLY A 503 1 11 HELIX 20 20 SER B 46 LEU B 56 1 11 HELIX 21 21 SER B 66 HIS B 87 1 22 HELIX 22 22 LYS B 100 MET B 104 1 5 HELIX 23 23 LEU B 131 ASN B 142 1 12 HELIX 24 24 MET B 185 LEU B 202 1 18 HELIX 25 25 ARG B 214 CYS B 224 1 11 HELIX 26 26 SER B 227 SER B 229 5 3 HELIX 27 27 LYS B 230 ASP B 239 1 10 HELIX 28 28 LYS B 240 LYS B 243 5 4 HELIX 29 29 SER B 245 GLY B 255 1 11 HELIX 30 30 ALA B 260 GLN B 272 1 13 HELIX 31 31 GLY B 276 GLN B 285 1 10 HELIX 32 32 LYS B 288 GLN B 291 5 4 HELIX 33 33 ASN B 292 PHE B 312 1 21 HELIX 34 34 ILE B 314 ASP B 316 5 3 HELIX 35 35 GLY B 365 ASP B 371 1 7 HELIX 36 36 GLY B 385 LEU B 400 1 16 HELIX 37 37 LEU B 420 ALA B 434 1 15 HELIX 38 38 LYS B 447 GLY B 459 1 13 HELIX 39 39 GLY B 467 ASP B 473 1 7 HELIX 40 40 ASP B 493 GLY B 503 1 11 SHEET 1 A 9 GLU A 90 VAL A 91 0 SHEET 2 A 9 ILE A 147 TYR A 156 1 O LYS A 148 N GLU A 90 SHEET 3 A 9 GLU A 170 ALA A 179 -1 O GLN A 173 N ALA A 153 SHEET 4 A 9 CYS A 379 ILE A 384 -1 O VAL A 380 N ILE A 178 SHEET 5 A 9 LEU A 352 ARG A 362 -1 N ALA A 359 O SER A 383 SHEET 6 A 9 VAL A 334 GLN A 342 -1 N TYR A 336 O GLY A 360 SHEET 7 A 9 PHE A 207 ASP A 213 -1 N LEU A 208 O VAL A 339 SHEET 8 A 9 ILE A 318 ASP A 321 1 O SER A 319 N VAL A 211 SHEET 9 A 9 HIS A 274 GLY A 275 -1 N GLY A 275 O PHE A 320 SHEET 1 B 2 PHE A 97 LEU A 99 0 SHEET 2 B 2 LEU A 125 LEU A 127 -1 O SER A 126 N GLU A 98 SHEET 1 C 5 ALA A 438 GLU A 439 0 SHEET 2 C 5 VAL A 411 ALA A 414 1 N VAL A 413 O GLU A 439 SHEET 3 C 5 LEU A 462 ILE A 465 1 O ALA A 464 N ALA A 414 SHEET 4 C 5 VAL A 475 SER A 480 -1 O LYS A 477 N ILE A 465 SHEET 5 C 5 GLU A 486 ARG A 490 -1 O VAL A 489 N ILE A 476 SHEET 1 D 9 GLU B 90 VAL B 91 0 SHEET 2 D 9 ILE B 147 TYR B 156 1 O LYS B 148 N GLU B 90 SHEET 3 D 9 GLU B 170 ALA B 179 -1 O ALA B 179 N ILE B 147 SHEET 4 D 9 CYS B 379 ILE B 384 -1 O VAL B 380 N ILE B 178 SHEET 5 D 9 SER B 356 ARG B 362 -1 N ALA B 359 O SER B 383 SHEET 6 D 9 VAL B 334 LEU B 340 -1 N ALA B 338 O ALA B 358 SHEET 7 D 9 PHE B 207 ASP B 213 -1 N LEU B 208 O VAL B 339 SHEET 8 D 9 ILE B 318 ASP B 321 1 O SER B 319 N VAL B 209 SHEET 9 D 9 HIS B 274 GLY B 275 -1 N GLY B 275 O PHE B 320 SHEET 1 E 2 PHE B 97 LEU B 99 0 SHEET 2 E 2 LEU B 125 LEU B 127 -1 O SER B 126 N GLU B 98 SHEET 1 F 5 ALA B 438 GLU B 439 0 SHEET 2 F 5 VAL B 411 ALA B 414 1 N VAL B 413 O GLU B 439 SHEET 3 F 5 LEU B 462 ILE B 465 1 O ALA B 464 N LEU B 412 SHEET 4 F 5 VAL B 475 SER B 480 -1 O LYS B 477 N ILE B 465 SHEET 5 F 5 GLU B 486 ARG B 490 -1 O VAL B 487 N LEU B 478 SITE 1 AC1 9 THR A 132 ASP A 175 ASP A 177 TYR A 331 SITE 2 AC1 9 GLY A 360 TYR A 363 GLY A 381 LEU A 382 SITE 3 AC1 9 SER A 383 SITE 1 AC2 8 THR B 132 ASP B 175 ASP B 177 TYR B 331 SITE 2 AC2 8 TYR B 363 GLY B 381 LEU B 382 SER B 383 SITE 1 AC3 4 GLU B 47 ARG B 51 PHE B 54 GLU B 423 SITE 1 AC4 4 ARG A 479 ARG A 484 ARG B 479 ARG B 484 CRYST1 93.519 93.519 254.533 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010693 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010693 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003929 0.00000